BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00026463
         (403 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007213347.1| hypothetical protein PRUPE_ppa1027127mg [Pru...    70   2e-10
ref|XP_004245044.1| PREDICTED: pentatricopeptide repeat-containi...    70   4e-10
ref|XP_002280518.1| PREDICTED: pentatricopeptide repeat-containi...    68   1e-09
emb|CAN68786.1| hypothetical protein VITISV_024068 [Vitis vinife...    68   1e-09
ref|XP_007015264.1| Pentatricopeptide repeat superfamily protein...    68   1e-09
ref|XP_003589614.1| Pentatricopeptide repeat-containing protein ...    68   1e-09
gb|EXB80464.1| hypothetical protein L484_004371 [Morus notabilis]      67   2e-09
gb|EXB37462.1| hypothetical protein L484_002561 [Morus notabilis]      67   2e-09
ref|XP_004498306.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09
ref|XP_004498305.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09
ref|XP_004154693.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09
ref|XP_004139064.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09
ref|XP_006470532.1| PREDICTED: pentatricopeptide repeat-containi...    66   6e-09
ref|XP_003601363.1| Pentatricopeptide repeat-containing protein ...    66   6e-09
ref|XP_003552899.1| PREDICTED: pentatricopeptide repeat-containi...    65   7e-09
ref|XP_003530344.1| PREDICTED: pentatricopeptide repeat-containi...    65   7e-09
ref|XP_002299976.2| hypothetical protein POPTR_0001s28180g [Popu...    65   1e-08
ref|XP_004291779.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
ref|XP_006353851.1| PREDICTED: pentatricopeptide repeat-containi...    65   1e-08
ref|XP_006446306.1| hypothetical protein CICLE_v10016520mg [Citr...    64   2e-08

>ref|XP_007213347.1| hypothetical protein PRUPE_ppa1027127mg [Prunus persica]
           gi|462409212|gb|EMJ14546.1| hypothetical protein
           PRUPE_ppa1027127mg [Prunus persica]
          Length = 264

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 29/39 (74%), Positives = 38/39 (97%)
 Frame = -3

Query: 401 ELREKVKDDFLELFPDMIVYDPPEDLFDDEKLRSDDEND 285
           ELREKVKDDFLELFPDMI+YDPPEDLF+D++ ++++E+D
Sbjct: 226 ELREKVKDDFLELFPDMIIYDPPEDLFEDQECKTENEDD 264


>ref|XP_004245044.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Solanum lycopersicum]
          Length = 238

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = -3

Query: 401 ELREKVKDDFLELFPDMIVYDPPEDLFDDEKLRSDDEND 285
           ELREKVKDDFLELFPD +VYDPPEDLFDDE+ R + ++D
Sbjct: 200 ELREKVKDDFLELFPDAVVYDPPEDLFDDEEWRKESDDD 238


>ref|XP_002280518.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Vitis vinifera]
          Length = 248

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 31/39 (79%), Positives = 35/39 (89%)
 Frame = -3

Query: 401 ELREKVKDDFLELFPDMIVYDPPEDLFDDEKLRSDDEND 285
           ELREKVKDDFLELFP MIVYDPPEDLF+DE  R++ E+D
Sbjct: 210 ELREKVKDDFLELFPGMIVYDPPEDLFEDEDGRTESEDD 248


>emb|CAN68786.1| hypothetical protein VITISV_024068 [Vitis vinifera]
           gi|296083864|emb|CBI24252.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 31/39 (79%), Positives = 35/39 (89%)
 Frame = -3

Query: 401 ELREKVKDDFLELFPDMIVYDPPEDLFDDEKLRSDDEND 285
           ELREKVKDDFLELFP MIVYDPPEDLF+DE  R++ E+D
Sbjct: 156 ELREKVKDDFLELFPGMIVYDPPEDLFEDEDGRTESEDD 194


>ref|XP_007015264.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508785627|gb|EOY32883.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 248

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 30/39 (76%), Positives = 35/39 (89%)
 Frame = -3

Query: 401 ELREKVKDDFLELFPDMIVYDPPEDLFDDEKLRSDDEND 285
           ELREKVKDDFLELFPDMIVYDPPEDLF DE+ + + E++
Sbjct: 210 ELREKVKDDFLELFPDMIVYDPPEDLFGDEESKRESESE 248


>ref|XP_003589614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355478662|gb|AES59865.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 232

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = -3

Query: 401 ELREKVKDDFLELFPDMIVYDPPEDLFDDEKLRSDDEN 288
           ELREK+KDDFLE+FPDMI+YDPPEDLFDD +   D+ N
Sbjct: 191 ELREKIKDDFLEVFPDMIIYDPPEDLFDDHEKHDDESN 228


>gb|EXB80464.1| hypothetical protein L484_004371 [Morus notabilis]
          Length = 191

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 30/39 (76%), Positives = 34/39 (87%)
 Frame = -3

Query: 401 ELREKVKDDFLELFPDMIVYDPPEDLFDDEKLRSDDEND 285
           ELREKVKDDFLELFP MIVYDPPEDLF+D+  R D ++D
Sbjct: 153 ELREKVKDDFLELFPGMIVYDPPEDLFEDQDWRRDSDDD 191


>gb|EXB37462.1| hypothetical protein L484_002561 [Morus notabilis]
          Length = 164

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 30/39 (76%), Positives = 34/39 (87%)
 Frame = -3

Query: 401 ELREKVKDDFLELFPDMIVYDPPEDLFDDEKLRSDDEND 285
           ELREKVKDDFLELFP MIVYDPPEDLF+D+  R D ++D
Sbjct: 126 ELREKVKDDFLELFPGMIVYDPPEDLFEDQDWRRDSDDD 164


>ref|XP_004498306.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like isoform X2 [Cicer arietinum]
          Length = 176

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = -3

Query: 401 ELREKVKDDFLELFPDMIVYDPPEDLFDDEKLRSDDEND*HY 276
           ELREK+KDDFLE+FPDMI+YDPPEDLF+D +   D  N+  Y
Sbjct: 135 ELREKIKDDFLEIFPDMIIYDPPEDLFEDREKHKDGANNDFY 176


>ref|XP_004498305.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like isoform X1 [Cicer arietinum]
          Length = 238

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = -3

Query: 401 ELREKVKDDFLELFPDMIVYDPPEDLFDDEKLRSDDEND*HY 276
           ELREK+KDDFLE+FPDMI+YDPPEDLF+D +   D  N+  Y
Sbjct: 197 ELREKIKDDFLEIFPDMIIYDPPEDLFEDREKHKDGANNDFY 238


>ref|XP_004154693.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Cucumis sativus]
          Length = 241

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 29/39 (74%), Positives = 36/39 (92%)
 Frame = -3

Query: 401 ELREKVKDDFLELFPDMIVYDPPEDLFDDEKLRSDDEND 285
           ELRE+VKDDFLELFPDMIVYDPPEDLF++++ R+  E+D
Sbjct: 203 ELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSEDD 241


>ref|XP_004139064.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Cucumis sativus]
          Length = 256

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 29/39 (74%), Positives = 36/39 (92%)
 Frame = -3

Query: 401 ELREKVKDDFLELFPDMIVYDPPEDLFDDEKLRSDDEND 285
           ELRE+VKDDFLELFPDMIVYDPPEDLF++++ R+  E+D
Sbjct: 218 ELREQVKDDFLELFPDMIVYDPPEDLFEEDEDRNKSEDD 256


>ref|XP_006470532.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Citrus sinensis]
          Length = 234

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = -3

Query: 401 ELREKVKDDFLELFPDMIVYDPPEDLFDDEKLRSDDEND 285
           E REKVKDDFLELFPDMIVYDPPEDLF+D++ R + + +
Sbjct: 196 EFREKVKDDFLELFPDMIVYDPPEDLFEDQEWRRESDEE 234


>ref|XP_003601363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355490411|gb|AES71614.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 291

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 28/38 (73%), Positives = 32/38 (84%)
 Frame = -3

Query: 401 ELREKVKDDFLELFPDMIVYDPPEDLFDDEKLRSDDEN 288
           ELREK+KDDFLE+FPDMI+YDPPEDLFDD +   D  N
Sbjct: 250 ELREKIKDDFLEVFPDMIIYDPPEDLFDDHEKHDDVSN 287


>ref|XP_003552899.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Glycine max]
          Length = 234

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = -3

Query: 401 ELREKVKDDFLELFPDMIVYDPPEDLFDDEKLRSDDEN 288
           ELREKVKDDFLE+FP MI+YDPPEDLF+D K  +D +N
Sbjct: 193 ELREKVKDDFLEIFPGMIIYDPPEDLFEDNKQHNDRDN 230


>ref|XP_003530344.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Glycine max]
          Length = 232

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 28/38 (73%), Positives = 33/38 (86%)
 Frame = -3

Query: 401 ELREKVKDDFLELFPDMIVYDPPEDLFDDEKLRSDDEN 288
           ELREKVKDDFLE+FP MI+YDPPEDLF+D K  +D +N
Sbjct: 195 ELREKVKDDFLEIFPGMIIYDPPEDLFEDNKQHNDRDN 232


>ref|XP_002299976.2| hypothetical protein POPTR_0001s28180g [Populus trichocarpa]
           gi|550348359|gb|EEE84781.2| hypothetical protein
           POPTR_0001s28180g [Populus trichocarpa]
          Length = 246

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = -3

Query: 401 ELREKVKDDFLELFPDMIVYDPPEDLFDDEKLRSDDEND 285
           ELRE+VKDDFLELFPDMIVYDP EDLF+D++   D E+D
Sbjct: 208 ELREEVKDDFLELFPDMIVYDPAEDLFEDQEREKDREDD 246


>ref|XP_004291779.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Fragaria vesca subsp. vesca]
          Length = 262

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 28/39 (71%), Positives = 35/39 (89%)
 Frame = -3

Query: 401 ELREKVKDDFLELFPDMIVYDPPEDLFDDEKLRSDDEND 285
           ELREKVK DF+ELFPDMIVYDPPEDLF+D++ +S+  +D
Sbjct: 223 ELREKVKADFVELFPDMIVYDPPEDLFEDQEWKSESNDD 261


>ref|XP_006353851.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like isoform X1 [Solanum tuberosum]
           gi|565374613|ref|XP_006353852.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g62350-like isoform X2 [Solanum tuberosum]
           gi|565374615|ref|XP_006353853.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g62350-like isoform X3 [Solanum tuberosum]
          Length = 237

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/38 (78%), Positives = 34/38 (89%), Gaps = 1/38 (2%)
 Frame = -3

Query: 401 ELREKVKDDFLELFPDMIVYDPPEDLFDDE-KLRSDDE 291
           ELREKVKDDFLELFPD +VYDPPEDLFD+E +  SDD+
Sbjct: 200 ELREKVKDDFLELFPDTVVYDPPEDLFDEECRKESDDD 237


>ref|XP_006446306.1| hypothetical protein CICLE_v10016520mg [Citrus clementina]
           gi|557548917|gb|ESR59546.1| hypothetical protein
           CICLE_v10016520mg [Citrus clementina]
          Length = 234

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 27/39 (69%), Positives = 34/39 (87%)
 Frame = -3

Query: 401 ELREKVKDDFLELFPDMIVYDPPEDLFDDEKLRSDDEND 285
           E REKVKDDFL+LFPDMIVYDPPEDLF+D++ R + + +
Sbjct: 196 EFREKVKDDFLKLFPDMIVYDPPEDLFEDQEWRRESDEE 234