BLASTX nr result
ID: Cocculus22_contig00026311
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00026311
(424 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V... 240 2e-61
gb|ADU04145.1| hypothetical protein [Gossypium hirsutum] 238 8e-61
gb|ADU04140.1| hypothetical protein [Gossypium hirsutum] 236 2e-60
ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 234 1e-59
gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis] 232 5e-59
ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 232 5e-59
ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Th... 230 1e-58
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico... 227 1e-57
ref|XP_006286933.1| hypothetical protein CARUB_v10000076mg, part... 223 2e-56
gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza] 223 3e-56
ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis tha... 223 3e-56
ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis... 222 4e-56
ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prun... 222 5e-56
ref|XP_002872551.1| RNA-dependent RNA polymerase 2 [Arabidopsis ... 221 6e-56
ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 221 8e-56
ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Popu... 221 8e-56
ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutr... 221 1e-55
ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-li... 221 1e-55
ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Rici... 221 1e-55
gb|EYU42543.1| hypothetical protein MIMGU_mgv1a000463mg [Mimulus... 212 4e-53
>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
gi|297733815|emb|CBI15062.3| unnamed protein product
[Vitis vinifera]
Length = 1127
Score = 240 bits (612), Expect = 2e-61
Identities = 106/141 (75%), Positives = 127/141 (90%)
Frame = +1
Query: 1 QISDIRSKCRIFVPKGRVLMGCMDETGTLCYGRVYIRVNLKRAELQCRDQTFYQNVDEKT 180
Q+SDIR++CRIFVPK RVL+GC+DETG L YG+VY+RV + +AE +CR+Q+F+Q VD+ T
Sbjct: 705 QLSDIRTRCRIFVPKARVLIGCLDETGILNYGQVYVRVTMTKAEHKCRNQSFFQKVDDTT 764
Query: 181 AVIVGKVVVTKNPCLHPGDIRVLQAVYEPLLEEKGLVDCILFPQKGERPHPNECSGGDLD 360
+V++GKV+VTKNPCLHPGDIRVL AVYE LEEKGLVDCILFPQKGERPHPNECSGGDLD
Sbjct: 765 SVVIGKVIVTKNPCLHPGDIRVLDAVYEVELEEKGLVDCILFPQKGERPHPNECSGGDLD 824
Query: 361 GDLYFVCWDENLIPPQTDAPM 423
GD +F+CWDE LIP QT+APM
Sbjct: 825 GDQFFICWDEGLIPSQTEAPM 845
>gb|ADU04145.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 238 bits (606), Expect = 8e-61
Identities = 100/140 (71%), Positives = 130/140 (92%)
Frame = +1
Query: 4 ISDIRSKCRIFVPKGRVLMGCMDETGTLCYGRVYIRVNLKRAELQCRDQTFYQNVDEKTA 183
+SD++S+CRIFVPKGR+L+GC+DETGTL YG+VY+ + +K+AEL+C DQ++++ VDE+TA
Sbjct: 706 LSDLKSRCRIFVPKGRILIGCLDETGTLNYGQVYLCIKMKKAELECADQSYFRKVDEETA 765
Query: 184 VIVGKVVVTKNPCLHPGDIRVLQAVYEPLLEEKGLVDCILFPQKGERPHPNECSGGDLDG 363
+++GKVVVTKNPCLHPGD+RVL+AVYEP LEEKGLVDC++FPQKGERPHPNECSGGDLDG
Sbjct: 766 IVIGKVVVTKNPCLHPGDVRVLEAVYEPQLEEKGLVDCLVFPQKGERPHPNECSGGDLDG 825
Query: 364 DLYFVCWDENLIPPQTDAPM 423
D +F+ WD++LIP QT+ PM
Sbjct: 826 DQFFISWDKDLIPCQTEPPM 845
>gb|ADU04140.1| hypothetical protein [Gossypium hirsutum]
Length = 1147
Score = 236 bits (603), Expect = 2e-60
Identities = 99/140 (70%), Positives = 130/140 (92%)
Frame = +1
Query: 4 ISDIRSKCRIFVPKGRVLMGCMDETGTLCYGRVYIRVNLKRAELQCRDQTFYQNVDEKTA 183
+SD++S+CRIFVPKGR+L+GC+DETGTL YG+VY+ + +K+AEL+C DQ++++ VDE+TA
Sbjct: 706 LSDLKSRCRIFVPKGRILIGCLDETGTLNYGQVYLCIKMKKAELECADQSYFRKVDEETA 765
Query: 184 VIVGKVVVTKNPCLHPGDIRVLQAVYEPLLEEKGLVDCILFPQKGERPHPNECSGGDLDG 363
+++GKVVVTKNPCLHPGD+RVL+AVYEP LEEKGLVDC++FP+KGERPHPNECSGGDLDG
Sbjct: 766 IVIGKVVVTKNPCLHPGDVRVLEAVYEPQLEEKGLVDCLVFPEKGERPHPNECSGGDLDG 825
Query: 364 DLYFVCWDENLIPPQTDAPM 423
D +F+ WD++LIP QT+ PM
Sbjct: 826 DQFFISWDKDLIPCQTEPPM 845
>ref|XP_004236120.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum lycopersicum]
Length = 1119
Score = 234 bits (596), Expect = 1e-59
Identities = 105/141 (74%), Positives = 123/141 (87%)
Frame = +1
Query: 1 QISDIRSKCRIFVPKGRVLMGCMDETGTLCYGRVYIRVNLKRAELQCRDQTFYQNVDEKT 180
QISD+RS+CRIF+PKGR+L+GC+DETG L YG+VY+R+ + +AELQ Q F+Q VDE T
Sbjct: 707 QISDLRSRCRIFIPKGRILVGCLDETGILKYGQVYVRITMTKAELQNGQQNFFQKVDETT 766
Query: 181 AVIVGKVVVTKNPCLHPGDIRVLQAVYEPLLEEKGLVDCILFPQKGERPHPNECSGGDLD 360
AV+ GKVVVTKNPCLHPGD+RVL+AVYE LEEK VDCI+FPQKGERPHPNECSGGDLD
Sbjct: 767 AVVRGKVVVTKNPCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQKGERPHPNECSGGDLD 826
Query: 361 GDLYFVCWDENLIPPQTDAPM 423
GDLYF+CWDE+LIP QT PM
Sbjct: 827 GDLYFICWDESLIPCQTVTPM 847
>gb|EXC16034.1| RNA-dependent RNA polymerase 2 [Morus notabilis]
Length = 1115
Score = 232 bits (591), Expect = 5e-59
Identities = 98/141 (69%), Positives = 130/141 (92%)
Frame = +1
Query: 1 QISDIRSKCRIFVPKGRVLMGCMDETGTLCYGRVYIRVNLKRAELQCRDQTFYQNVDEKT 180
Q+SD++++CRIFVPKG+VL+GC+DETG L YG+VY+R+ +K+AEL+ +Q+F++ VD++T
Sbjct: 703 QLSDLKTRCRIFVPKGKVLIGCLDETGILEYGQVYVRLTMKKAELEAGNQSFFRKVDDET 762
Query: 181 AVIVGKVVVTKNPCLHPGDIRVLQAVYEPLLEEKGLVDCILFPQKGERPHPNECSGGDLD 360
+++VGKVVVTKNPCLHPGD+RVL+AVY+ LEE+GLVDC++FPQKGERPHPNECSGGDLD
Sbjct: 763 SIVVGKVVVTKNPCLHPGDVRVLEAVYDAKLEEEGLVDCLVFPQKGERPHPNECSGGDLD 822
Query: 361 GDLYFVCWDENLIPPQTDAPM 423
GDL+F+ WD NLIPP+T APM
Sbjct: 823 GDLFFISWDTNLIPPRTTAPM 843
>ref|XP_006345040.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Solanum tuberosum]
Length = 1119
Score = 232 bits (591), Expect = 5e-59
Identities = 104/141 (73%), Positives = 121/141 (85%)
Frame = +1
Query: 1 QISDIRSKCRIFVPKGRVLMGCMDETGTLCYGRVYIRVNLKRAELQCRDQTFYQNVDEKT 180
QISD+RS+CRIF+PKGR+L+GC+DETG L YG VY+R+ + +AELQ Q F+Q VDE T
Sbjct: 707 QISDLRSRCRIFIPKGRILVGCLDETGILKYGEVYVRITMTKAELQNGQQNFFQKVDETT 766
Query: 181 AVIVGKVVVTKNPCLHPGDIRVLQAVYEPLLEEKGLVDCILFPQKGERPHPNECSGGDLD 360
AV+ GKVVVTKNPCLHPGD+RVL+AVYE LEEK VDCI+FPQ GERPHPNECSGGDLD
Sbjct: 767 AVVRGKVVVTKNPCLHPGDVRVLEAVYEVTLEEKTWVDCIIFPQNGERPHPNECSGGDLD 826
Query: 361 GDLYFVCWDENLIPPQTDAPM 423
GDLYF+CWDE+LIP QT PM
Sbjct: 827 GDLYFICWDESLIPHQTVTPM 847
>ref|XP_007036161.1| RNA-dependent RNA polymerase 2 isoform 1 [Theobroma cacao]
gi|590663258|ref|XP_007036162.1| RNA-dependent RNA
polymerase 2 isoform 1 [Theobroma cacao]
gi|508773406|gb|EOY20662.1| RNA-dependent RNA polymerase
2 isoform 1 [Theobroma cacao] gi|508773407|gb|EOY20663.1|
RNA-dependent RNA polymerase 2 isoform 1 [Theobroma
cacao]
Length = 1149
Score = 230 bits (587), Expect = 1e-58
Identities = 99/140 (70%), Positives = 127/140 (90%)
Frame = +1
Query: 4 ISDIRSKCRIFVPKGRVLMGCMDETGTLCYGRVYIRVNLKRAELQCRDQTFYQNVDEKTA 183
+SD++ +CRI+VPKG+VL+GC+DET TL YG+VY+R+++K+AEL+ DQ F+ VDEKTA
Sbjct: 714 LSDLKCRCRIYVPKGQVLVGCLDETATLNYGQVYVRLSIKKAELEHADQNFFHKVDEKTA 773
Query: 184 VIVGKVVVTKNPCLHPGDIRVLQAVYEPLLEEKGLVDCILFPQKGERPHPNECSGGDLDG 363
+++GKVVVTKNPCLHPGD+RVL+AVYE LE+KGLVDC++FPQKGERPHPNECSGGDLDG
Sbjct: 774 IVIGKVVVTKNPCLHPGDVRVLEAVYEAELEDKGLVDCLVFPQKGERPHPNECSGGDLDG 833
Query: 364 DLYFVCWDENLIPPQTDAPM 423
D +F+ WD++LIP QTDAPM
Sbjct: 834 DQFFISWDKDLIPCQTDAPM 853
>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
Length = 1120
Score = 227 bits (579), Expect = 1e-57
Identities = 103/141 (73%), Positives = 120/141 (85%)
Frame = +1
Query: 1 QISDIRSKCRIFVPKGRVLMGCMDETGTLCYGRVYIRVNLKRAELQCRDQTFYQNVDEKT 180
Q+SD+RS+CRIF+ KGRVL+GC+DETG L YG+VY R+ + +AELQ Q+F+Q VDE T
Sbjct: 708 QLSDLRSRCRIFIHKGRVLVGCLDETGILNYGQVYARITMTKAELQSAQQSFFQKVDETT 767
Query: 181 AVIVGKVVVTKNPCLHPGDIRVLQAVYEPLLEEKGLVDCILFPQKGERPHPNECSGGDLD 360
AV+ G VVVTKNPCLHPGD+RVL+AVYE LEEK VDCI+FPQKGERPHPNECSGGDLD
Sbjct: 768 AVVRGNVVVTKNPCLHPGDVRVLEAVYEVALEEKAWVDCIIFPQKGERPHPNECSGGDLD 827
Query: 361 GDLYFVCWDENLIPPQTDAPM 423
GDLYF+ WDENLIP QT PM
Sbjct: 828 GDLYFISWDENLIPRQTVTPM 848
>ref|XP_006286933.1| hypothetical protein CARUB_v10000076mg, partial [Capsella rubella]
gi|482555639|gb|EOA19831.1| hypothetical protein
CARUB_v10000076mg, partial [Capsella rubella]
Length = 1165
Score = 223 bits (569), Expect = 2e-56
Identities = 97/141 (68%), Positives = 122/141 (86%)
Frame = +1
Query: 1 QISDIRSKCRIFVPKGRVLMGCMDETGTLCYGRVYIRVNLKRAELQCRDQTFYQNVDEKT 180
Q+S+++S+CRI VPKGR+L+GCMDE G L YG+VY+RV L +AEL+ R+Q++++ +DE+T
Sbjct: 745 QLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSREQSYFKKIDEET 804
Query: 181 AVIVGKVVVTKNPCLHPGDIRVLQAVYEPLLEEKGLVDCILFPQKGERPHPNECSGGDLD 360
+V++GKVVVTKNPCLHPGDIRVL A+YE EEKG +DCI+FPQKGERPHPNECSGGDLD
Sbjct: 805 SVVIGKVVVTKNPCLHPGDIRVLDAIYEVNFEEKGFLDCIIFPQKGERPHPNECSGGDLD 864
Query: 361 GDLYFVCWDENLIPPQTDAPM 423
GD +FV WDE LIP Q D PM
Sbjct: 865 GDQFFVSWDEKLIPSQMDPPM 885
>gb|AHL27587.1| RNA-dependent RNA polymerase 4 [Salvia miltiorrhiza]
Length = 972
Score = 223 bits (567), Expect = 3e-56
Identities = 98/141 (69%), Positives = 123/141 (87%)
Frame = +1
Query: 1 QISDIRSKCRIFVPKGRVLMGCMDETGTLCYGRVYIRVNLKRAELQCRDQTFYQNVDEKT 180
QISDIRS+CRIFVPKGRVL+GC+DE+GTL YG+V++R+ + AEL+ DQ F+Q VDE T
Sbjct: 714 QISDIRSRCRIFVPKGRVLVGCLDESGTLEYGQVFVRLTMNTAELEGGDQPFFQRVDETT 773
Query: 181 AVIVGKVVVTKNPCLHPGDIRVLQAVYEPLLEEKGLVDCILFPQKGERPHPNECSGGDLD 360
+++ GKVVVTKNPCLHPGD+RVL+AVY+ L+E +VDC++FPQKGERPHPNECSGGDLD
Sbjct: 774 SILRGKVVVTKNPCLHPGDVRVLEAVYDIKLQEDNMVDCLVFPQKGERPHPNECSGGDLD 833
Query: 361 GDLYFVCWDENLIPPQTDAPM 423
GDLYF+ WD +L+PP+T PM
Sbjct: 834 GDLYFISWDVDLVPPRTVTPM 854
>ref|NP_192851.1| RNA-dependent RNA polymerase 2 [Arabidopsis thaliana]
gi|75318859|sp|O82504.1|RDR2_ARATH RecName:
Full=RNA-dependent RNA polymerase 2; Short=AtRDRP2;
AltName: Full=Protein SILENCING MOVEMENT DEFICIENT 1;
AltName: Full=RNA-directed RNA polymerase 2
gi|3600048|gb|AAC35535.1| similar to hypothetical
proteins in Schizosaccharomyces pombe (GB:Z98533) and C.
elegans (GB:Z48334 and Z78419) [Arabidopsis thaliana]
gi|4850292|emb|CAB43048.1| putative RNA-directed RNA
polymerase [Arabidopsis thaliana]
gi|7267812|emb|CAB81214.1| putative RNA-directed RNA
polymerase [Arabidopsis thaliana]
gi|332657576|gb|AEE82976.1| RNA-dependent RNA polymerase
2 [Arabidopsis thaliana]
Length = 1133
Score = 223 bits (567), Expect = 3e-56
Identities = 96/141 (68%), Positives = 122/141 (86%)
Frame = +1
Query: 1 QISDIRSKCRIFVPKGRVLMGCMDETGTLCYGRVYIRVNLKRAELQCRDQTFYQNVDEKT 180
Q+S+++S+CRI VPKGR+L+GCMDE G L YG+VY+RV L +AEL+ RDQ++++ +DE+T
Sbjct: 713 QLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELKSRDQSYFRKIDEET 772
Query: 181 AVIVGKVVVTKNPCLHPGDIRVLQAVYEPLLEEKGLVDCILFPQKGERPHPNECSGGDLD 360
+V++GKVVVTKNPCLHPGDIRVL A+YE EEKG +DCI+FPQKGERPHPNECSGGDLD
Sbjct: 773 SVVIGKVVVTKNPCLHPGDIRVLDAIYEVHFEEKGYLDCIIFPQKGERPHPNECSGGDLD 832
Query: 361 GDLYFVCWDENLIPPQTDAPM 423
GD +FV WDE +IP + D PM
Sbjct: 833 GDQFFVSWDEKIIPSEMDPPM 853
>ref|NP_001267608.1| RNA-dependent RNA polymerase 2-like [Cucumis sativus]
gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
2 [Cucumis sativus]
Length = 1117
Score = 222 bits (566), Expect = 4e-56
Identities = 95/139 (68%), Positives = 121/139 (87%)
Frame = +1
Query: 7 SDIRSKCRIFVPKGRVLMGCMDETGTLCYGRVYIRVNLKRAELQCRDQTFYQNVDEKTAV 186
SD+RS+CRIFVPKGR+L+GC+DETG L YG+VY + L ++ELQ R+Q ++ +DE ++
Sbjct: 707 SDLRSRCRIFVPKGRILLGCLDETGILNYGQVYACITLTKSELQSRNQNYFHTIDETKSI 766
Query: 187 IVGKVVVTKNPCLHPGDIRVLQAVYEPLLEEKGLVDCILFPQKGERPHPNECSGGDLDGD 366
++GKVVVTKNPCLHPGD+RVL+A++ LEEKGLVDC++FPQKG RPH NECSGGDLDGD
Sbjct: 767 LLGKVVVTKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGD 826
Query: 367 LYFVCWDENLIPPQTDAPM 423
LYF+ WDENLIPP+T+APM
Sbjct: 827 LYFISWDENLIPPKTEAPM 845
>ref|XP_007211312.1| hypothetical protein PRUPE_ppa000513mg [Prunus persica]
gi|462407047|gb|EMJ12511.1| hypothetical protein
PRUPE_ppa000513mg [Prunus persica]
Length = 1118
Score = 222 bits (565), Expect = 5e-56
Identities = 95/140 (67%), Positives = 121/140 (86%)
Frame = +1
Query: 4 ISDIRSKCRIFVPKGRVLMGCMDETGTLCYGRVYIRVNLKRAELQCRDQTFYQNVDEKTA 183
+SD++S+CRIFVPKGRVL+GC+DETG L YG+VY+R+ + +AE + DQ+F+Q VDE T
Sbjct: 707 LSDLKSRCRIFVPKGRVLVGCLDETGNLDYGQVYVRITMTKAEQEMGDQSFFQKVDETTL 766
Query: 184 VIVGKVVVTKNPCLHPGDIRVLQAVYEPLLEEKGLVDCILFPQKGERPHPNECSGGDLDG 363
V+ GKVVVTKNPCLHPGD+RVL AVY+ +LEEK +VDC++FPQKGERPHPNECSGGDLDG
Sbjct: 767 VVTGKVVVTKNPCLHPGDVRVLDAVYDVVLEEKNMVDCLIFPQKGERPHPNECSGGDLDG 826
Query: 364 DLYFVCWDENLIPPQTDAPM 423
DL+F+ WD++L+P T PM
Sbjct: 827 DLFFISWDKDLVPSHTVPPM 846
>ref|XP_002872551.1| RNA-dependent RNA polymerase 2 [Arabidopsis lyrata subsp. lyrata]
gi|297318388|gb|EFH48810.1| RNA-dependent RNA polymerase
2 [Arabidopsis lyrata subsp. lyrata]
Length = 1134
Score = 221 bits (564), Expect = 6e-56
Identities = 96/141 (68%), Positives = 121/141 (85%)
Frame = +1
Query: 1 QISDIRSKCRIFVPKGRVLMGCMDETGTLCYGRVYIRVNLKRAELQCRDQTFYQNVDEKT 180
Q+S+++S+CRI VPKGR+L+GCMDE G L YG+V++RV L +AEL+ R+Q+++ +DE+T
Sbjct: 714 QLSELKSRCRILVPKGRILIGCMDEMGILEYGQVFVRVTLTKAELKSREQSYFHKIDEET 773
Query: 181 AVIVGKVVVTKNPCLHPGDIRVLQAVYEPLLEEKGLVDCILFPQKGERPHPNECSGGDLD 360
+V++GKVVVTKNPCLHPGDIRVL A+YE EEKG +DCI+FPQKGERPHPNECSGGDLD
Sbjct: 774 SVVIGKVVVTKNPCLHPGDIRVLDAIYEVNFEEKGFLDCIIFPQKGERPHPNECSGGDLD 833
Query: 361 GDLYFVCWDENLIPPQTDAPM 423
GD +FV WDE LIP Q D PM
Sbjct: 834 GDQFFVSWDEKLIPSQMDPPM 854
>ref|XP_006476748.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Citrus sinensis]
Length = 1131
Score = 221 bits (563), Expect = 8e-56
Identities = 94/141 (66%), Positives = 123/141 (87%)
Frame = +1
Query: 1 QISDIRSKCRIFVPKGRVLMGCMDETGTLCYGRVYIRVNLKRAELQCRDQTFYQNVDEKT 180
Q+SD++S+CRI+VPKGR+L+GC DETG L YG+V++RV + R EL+ +DQ+F+ VD+KT
Sbjct: 721 QLSDLKSRCRIYVPKGRLLIGCFDETGILNYGQVFVRVTMTREELESKDQSFFHRVDDKT 780
Query: 181 AVIVGKVVVTKNPCLHPGDIRVLQAVYEPLLEEKGLVDCILFPQKGERPHPNECSGGDLD 360
+++ GKV+VTKNPCLHPGD+RVL+AVYE LEEK VDCI+FPQKGERPHPNECSGGDLD
Sbjct: 781 SIVKGKVLVTKNPCLHPGDVRVLEAVYEMKLEEKDYVDCIIFPQKGERPHPNECSGGDLD 840
Query: 361 GDLYFVCWDENLIPPQTDAPM 423
GD++F+ WD +LIP +T+ PM
Sbjct: 841 GDIFFISWDNDLIPCETEPPM 861
>ref|XP_002321582.1| hypothetical protein POPTR_0015s08500g [Populus trichocarpa]
gi|222868578|gb|EEF05709.1| hypothetical protein
POPTR_0015s08500g [Populus trichocarpa]
Length = 1110
Score = 221 bits (563), Expect = 8e-56
Identities = 95/140 (67%), Positives = 121/140 (86%)
Frame = +1
Query: 4 ISDIRSKCRIFVPKGRVLMGCMDETGTLCYGRVYIRVNLKRAELQCRDQTFYQNVDEKTA 183
+ ++RS+CRIFVPKGR+L+GC+DE+G L YG+VY+R+ + +AELQC DQ+F++ VDE T+
Sbjct: 701 LMELRSRCRIFVPKGRILIGCLDESGILDYGQVYVRITMTKAELQCCDQSFFRKVDESTS 760
Query: 184 VIVGKVVVTKNPCLHPGDIRVLQAVYEPLLEEKGLVDCILFPQKGERPHPNECSGGDLDG 363
I+G+V VTKNPCLHPGDIRVL+AVY+ LEEKGLVDCI+FPQ G RPHPNECSGGDLDG
Sbjct: 761 TIIGEVAVTKNPCLHPGDIRVLEAVYDVELEEKGLVDCIIFPQNGGRPHPNECSGGDLDG 820
Query: 364 DLYFVCWDENLIPPQTDAPM 423
D +F+ WDE L+P T+APM
Sbjct: 821 DQFFISWDEGLLPCHTEAPM 840
>ref|XP_006396953.1| hypothetical protein EUTSA_v10028370mg [Eutrema salsugineum]
gi|557097970|gb|ESQ38406.1| hypothetical protein
EUTSA_v10028370mg [Eutrema salsugineum]
Length = 1124
Score = 221 bits (562), Expect = 1e-55
Identities = 96/141 (68%), Positives = 120/141 (85%)
Frame = +1
Query: 1 QISDIRSKCRIFVPKGRVLMGCMDETGTLCYGRVYIRVNLKRAELQCRDQTFYQNVDEKT 180
Q+S+++S+CRI VPKGR+L+GCMDE G L YG+VY+RV L +AEL+ R+Q ++ +DE+T
Sbjct: 711 QLSELKSRCRILVPKGRILIGCMDEMGILEYGQVYVRVTLTKAELESREQGYFHKIDEET 770
Query: 181 AVIVGKVVVTKNPCLHPGDIRVLQAVYEPLLEEKGLVDCILFPQKGERPHPNECSGGDLD 360
+V++GKVVVTKNPCLHPGDIRVL A+YE E+KG +DCI+FPQKGERPHPNECSGGDLD
Sbjct: 771 SVVIGKVVVTKNPCLHPGDIRVLDAIYEISFEQKGFLDCIVFPQKGERPHPNECSGGDLD 830
Query: 361 GDLYFVCWDENLIPPQTDAPM 423
GD +FV WDE LIP Q D PM
Sbjct: 831 GDQFFVSWDEKLIPSQMDPPM 851
>ref|XP_004298927.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Fragaria vesca subsp.
vesca]
Length = 1136
Score = 221 bits (562), Expect = 1e-55
Identities = 95/140 (67%), Positives = 122/140 (87%)
Frame = +1
Query: 4 ISDIRSKCRIFVPKGRVLMGCMDETGTLCYGRVYIRVNLKRAELQCRDQTFYQNVDEKTA 183
++D++S+CR++VPKGR+L+GC+DETGTL YG+VY+R+ + +AE + Q+F+Q VDE T
Sbjct: 709 LADLKSRCRMYVPKGRILVGCLDETGTLNYGQVYLRITMTKAEQEMGHQSFFQRVDEATC 768
Query: 184 VIVGKVVVTKNPCLHPGDIRVLQAVYEPLLEEKGLVDCILFPQKGERPHPNECSGGDLDG 363
++ GKVVVTKNPCLHPGDIRVL+AVY+ LEEK +VDCILFPQKGERPHPNECSGGDLDG
Sbjct: 769 IVTGKVVVTKNPCLHPGDIRVLEAVYDVGLEEKNMVDCILFPQKGERPHPNECSGGDLDG 828
Query: 364 DLYFVCWDENLIPPQTDAPM 423
DL+F+ WD++LIPP T PM
Sbjct: 829 DLFFISWDKSLIPPTTVPPM 848
>ref|XP_002511431.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
gi|223550546|gb|EEF52033.1| RNA-dependent RNA
polymerase, putative [Ricinus communis]
Length = 983
Score = 221 bits (562), Expect = 1e-55
Identities = 98/138 (71%), Positives = 119/138 (86%)
Frame = +1
Query: 10 DIRSKCRIFVPKGRVLMGCMDETGTLCYGRVYIRVNLKRAELQCRDQTFYQNVDEKTAVI 189
++RS+CRIFVPKGR+L+GC+DET L YG+VY+R+ + +AELQ DQ + VDE TAV+
Sbjct: 558 ELRSRCRIFVPKGRILIGCLDETRILDYGQVYVRITMTKAELQDADQASFHRVDETTAVV 617
Query: 190 VGKVVVTKNPCLHPGDIRVLQAVYEPLLEEKGLVDCILFPQKGERPHPNECSGGDLDGDL 369
GKV+VTKNPCLHPGDIRVL+AVYE LEEKGLVDCILFPQKGERPHPNECSGGDLDGD
Sbjct: 618 TGKVIVTKNPCLHPGDIRVLEAVYEVELEEKGLVDCILFPQKGERPHPNECSGGDLDGDQ 677
Query: 370 YFVCWDENLIPPQTDAPM 423
+F+ WD+ LIP +T++PM
Sbjct: 678 FFISWDKGLIPGETESPM 695
>gb|EYU42543.1| hypothetical protein MIMGU_mgv1a000463mg [Mimulus guttatus]
Length = 1135
Score = 212 bits (540), Expect = 4e-53
Identities = 94/141 (66%), Positives = 119/141 (84%)
Frame = +1
Query: 1 QISDIRSKCRIFVPKGRVLMGCMDETGTLCYGRVYIRVNLKRAELQCRDQTFYQNVDEKT 180
Q+SD+RS+ RIFVPKGRVL+G +DETG L YG+VY+R+ + +E++ +Q F+ +DE T
Sbjct: 714 QLSDLRSRGRIFVPKGRVLVGVLDETGNLEYGQVYVRITMTMSEIESGNQRFFHRIDETT 773
Query: 181 AVIVGKVVVTKNPCLHPGDIRVLQAVYEPLLEEKGLVDCILFPQKGERPHPNECSGGDLD 360
AV+ GKVVVTKNPCLHPGD+RVL+AV + L+E LVDC++FPQKG+RPHPNECSGGDLD
Sbjct: 774 AVLKGKVVVTKNPCLHPGDVRVLEAVLDVKLQENNLVDCLVFPQKGDRPHPNECSGGDLD 833
Query: 361 GDLYFVCWDENLIPPQTDAPM 423
GDLYFV WDENL+PP+T PM
Sbjct: 834 GDLYFVSWDENLVPPRTVDPM 854