BLASTX nr result

ID: Cocculus22_contig00026274 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00026274
         (348 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312632.2| hypothetical protein POPTR_0008s17720g [Popu...    55   8e-06
ref|XP_002514945.1| ATP binding protein, putative [Ricinus commu...    55   1e-05

>ref|XP_002312632.2| hypothetical protein POPTR_0008s17720g [Populus trichocarpa]
           gi|550333317|gb|EEE89999.2| hypothetical protein
           POPTR_0008s17720g [Populus trichocarpa]
          Length = 500

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/86 (33%), Positives = 51/86 (59%)
 Frame = -1

Query: 261 MFSMPSVPXXXXXXXXXXXXXAWTMLLRNILDEIQIVINKLIPEKLRTKLLTALNTFINV 82
           M+S+PS+P             A  ML+R++ +E+Q VIN+LIP+KL+ ++ ++L      
Sbjct: 1   MYSLPSMPSTTSVLSTYTAFAASAMLVRSVFNEVQAVINQLIPQKLQERISSSLGRLFG- 59

Query: 81  PSSSELTLVMSNNQGSVFNRLFDAAE 4
             SS LTL+++   G   N +++A+E
Sbjct: 60  DDSSRLTLIVNEYNGFSINEMYEASE 85


>ref|XP_002514945.1| ATP binding protein, putative [Ricinus communis]
           gi|223545996|gb|EEF47499.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 503

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/88 (30%), Positives = 53/88 (60%)
 Frame = -1

Query: 267 TNMFSMPSVPXXXXXXXXXXXXXAWTMLLRNILDEIQIVINKLIPEKLRTKLLTALNTFI 88
           +N+F+MPS+P             A +ML+R +L+E+Q +  +LIP+KL+ K++ +L +  
Sbjct: 2   SNIFTMPSIPSTTSVISTYTAFAASSMLVRTVLNEVQTMTAQLIPQKLQDKIMASLGSLF 61

Query: 87  NVPSSSELTLVMSNNQGSVFNRLFDAAE 4
            + +S +LTL++    G   N ++ A++
Sbjct: 62  RL-NSCKLTLIIDEYNGFTINEIYQASQ 88


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