BLASTX nr result
ID: Cocculus22_contig00026184
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00026184
(316 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003534325.1| PREDICTED: mediator of RNA polymerase II tra... 84 2e-27
ref|XP_006587645.1| PREDICTED: mediator of RNA polymerase II tra... 84 2e-27
ref|XP_006587646.1| PREDICTED: mediator of RNA polymerase II tra... 84 2e-27
ref|XP_006471562.1| PREDICTED: mediator of RNA polymerase II tra... 83 2e-26
ref|XP_006471563.1| PREDICTED: mediator of RNA polymerase II tra... 83 2e-26
ref|XP_006432823.1| hypothetical protein CICLE_v10001056mg [Citr... 83 2e-26
ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus commun... 80 3e-26
gb|EYU37468.1| hypothetical protein MIMGU_mgv1a001824mg [Mimulus... 80 4e-26
ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like... 80 4e-26
emb|CBI29242.3| unnamed protein product [Vitis vinifera] 80 4e-26
ref|XP_004512366.1| PREDICTED: mediator of RNA polymerase II tra... 80 4e-26
gb|AAF24590.1|AC007654_6 T19E23.16 [Arabidopsis thaliana] 76 2e-25
ref|XP_006306861.1| hypothetical protein CARUB_v10008406mg [Caps... 78 2e-25
ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family prote... 77 3e-25
ref|XP_007158129.1| hypothetical protein PHAVU_002G126800g [Phas... 77 5e-25
gb|EPS68779.1| hypothetical protein M569_05989, partial [Genlise... 75 5e-25
ref|NP_174421.2| mediator of RNA polymerase II transcription sub... 76 6e-25
ref|XP_002893846.1| RECQL2 [Arabidopsis lyrata subsp. lyrata] gi... 76 6e-25
ref|NP_001077639.1| mediator of RNA polymerase II transcription ... 76 6e-25
ref|XP_004246059.1| PREDICTED: mediator of RNA polymerase II tra... 76 8e-25
>ref|XP_003534325.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like isoform X1 [Glycine max]
Length = 695
Score = 84.3 bits (207), Expect(2) = 2e-27
Identities = 39/43 (90%), Positives = 42/43 (97%)
Frame = +3
Query: 30 VAKELRQHGISADYYHADMDVNAREKVHMRWSSNRLQVIVGTV 158
VAKELR+ GISADYYHADMDVNAREKVHMRWS+N+LQVIVGTV
Sbjct: 327 VAKELRERGISADYYHADMDVNAREKVHMRWSNNKLQVIVGTV 369
Score = 63.5 bits (153), Expect(2) = 2e-27
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 218 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 304
VAFGMGINKPDVRFVIHHSLSKSMETYYQ
Sbjct: 369 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 397
>ref|XP_006587645.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like isoform X2 [Glycine max]
Length = 690
Score = 84.3 bits (207), Expect(2) = 2e-27
Identities = 39/43 (90%), Positives = 42/43 (97%)
Frame = +3
Query: 30 VAKELRQHGISADYYHADMDVNAREKVHMRWSSNRLQVIVGTV 158
VAKELR+ GISADYYHADMDVNAREKVHMRWS+N+LQVIVGTV
Sbjct: 327 VAKELRERGISADYYHADMDVNAREKVHMRWSNNKLQVIVGTV 369
Score = 63.5 bits (153), Expect(2) = 2e-27
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 218 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 304
VAFGMGINKPDVRFVIHHSLSKSMETYYQ
Sbjct: 369 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 397
>ref|XP_006587646.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like isoform X3 [Glycine max]
Length = 546
Score = 84.3 bits (207), Expect(2) = 2e-27
Identities = 39/43 (90%), Positives = 42/43 (97%)
Frame = +3
Query: 30 VAKELRQHGISADYYHADMDVNAREKVHMRWSSNRLQVIVGTV 158
VAKELR+ GISADYYHADMDVNAREKVHMRWS+N+LQVIVGTV
Sbjct: 327 VAKELRERGISADYYHADMDVNAREKVHMRWSNNKLQVIVGTV 369
Score = 63.5 bits (153), Expect(2) = 2e-27
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 218 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 304
VAFGMGINKPDVRFVIHHSLSKSMETYYQ
Sbjct: 369 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 397
>ref|XP_006471562.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like isoform X1 [Citrus sinensis]
Length = 715
Score = 83.2 bits (204), Expect(2) = 2e-26
Identities = 38/43 (88%), Positives = 41/43 (95%)
Frame = +3
Query: 30 VAKELRQHGISADYYHADMDVNAREKVHMRWSSNRLQVIVGTV 158
VA+ELRQ GISADYYHADMD+NAREKVHMRWS N+LQVIVGTV
Sbjct: 331 VAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTV 373
Score = 62.0 bits (149), Expect(2) = 2e-26
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +2
Query: 218 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 304
VAFGMGINKPDVRFVIHHSLSKS+ETYYQ
Sbjct: 373 VAFGMGINKPDVRFVIHHSLSKSVETYYQ 401
>ref|XP_006471563.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like isoform X2 [Citrus sinensis]
Length = 567
Score = 83.2 bits (204), Expect(2) = 2e-26
Identities = 38/43 (88%), Positives = 41/43 (95%)
Frame = +3
Query: 30 VAKELRQHGISADYYHADMDVNAREKVHMRWSSNRLQVIVGTV 158
VA+ELRQ GISADYYHADMD+NAREKVHMRWS N+LQVIVGTV
Sbjct: 183 VAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTV 225
Score = 62.0 bits (149), Expect(2) = 2e-26
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +2
Query: 218 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 304
VAFGMGINKPDVRFVIHHSLSKS+ETYYQ
Sbjct: 225 VAFGMGINKPDVRFVIHHSLSKSVETYYQ 253
>ref|XP_006432823.1| hypothetical protein CICLE_v10001056mg [Citrus clementina]
gi|557534945|gb|ESR46063.1| hypothetical protein
CICLE_v10001056mg [Citrus clementina]
Length = 468
Score = 83.2 bits (204), Expect(2) = 2e-26
Identities = 38/43 (88%), Positives = 41/43 (95%)
Frame = +3
Query: 30 VAKELRQHGISADYYHADMDVNAREKVHMRWSSNRLQVIVGTV 158
VA+ELRQ GISADYYHADMD+NAREKVHMRWS N+LQVIVGTV
Sbjct: 331 VAQELRQRGISADYYHADMDINAREKVHMRWSKNKLQVIVGTV 373
Score = 62.0 bits (149), Expect(2) = 2e-26
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +2
Query: 218 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 304
VAFGMGINKPDVRFVIHHSLSKS+ETYYQ
Sbjct: 373 VAFGMGINKPDVRFVIHHSLSKSVETYYQ 401
>ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus communis]
gi|223540909|gb|EEF42467.1| DNA helicase recq1, putative
[Ricinus communis]
Length = 714
Score = 80.5 bits (197), Expect(2) = 3e-26
Identities = 37/43 (86%), Positives = 40/43 (93%)
Frame = +3
Query: 30 VAKELRQHGISADYYHADMDVNAREKVHMRWSSNRLQVIVGTV 158
VA +LR+ GISADYYHADMDVNAREKVHMRWS N+LQVIVGTV
Sbjct: 336 VAADLRERGISADYYHADMDVNAREKVHMRWSQNKLQVIVGTV 378
Score = 63.5 bits (153), Expect(2) = 3e-26
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 218 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 304
VAFGMGINKPDVRFVIHHSLSKSMETYYQ
Sbjct: 378 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 406
>gb|EYU37468.1| hypothetical protein MIMGU_mgv1a001824mg [Mimulus guttatus]
Length = 754
Score = 80.5 bits (197), Expect(2) = 4e-26
Identities = 38/43 (88%), Positives = 40/43 (93%)
Frame = +3
Query: 30 VAKELRQHGISADYYHADMDVNAREKVHMRWSSNRLQVIVGTV 158
VAKELR GISADYYHADMDV+AREKVHMRWSS +LQVIVGTV
Sbjct: 330 VAKELRDRGISADYYHADMDVHAREKVHMRWSSGKLQVIVGTV 372
Score = 63.2 bits (152), Expect(2) = 4e-26
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +2
Query: 218 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 304
VAFGMGINKPDVRFV+HHSLSKSMETYYQ
Sbjct: 372 VAFGMGINKPDVRFVVHHSLSKSMETYYQ 400
>ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Vitis
vinifera]
Length = 711
Score = 80.1 bits (196), Expect(2) = 4e-26
Identities = 36/43 (83%), Positives = 42/43 (97%)
Frame = +3
Query: 30 VAKELRQHGISADYYHADMDVNAREKVHMRWSSNRLQVIVGTV 158
VAKELR+ GISADYYHADMDVNARE+VH+RWS+++LQVIVGTV
Sbjct: 329 VAKELRERGISADYYHADMDVNARERVHLRWSNSKLQVIVGTV 371
Score = 63.5 bits (153), Expect(2) = 4e-26
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 218 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 304
VAFGMGINKPDVRFVIHHSLSKSMETYYQ
Sbjct: 371 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 399
>emb|CBI29242.3| unnamed protein product [Vitis vinifera]
Length = 710
Score = 80.1 bits (196), Expect(2) = 4e-26
Identities = 36/43 (83%), Positives = 42/43 (97%)
Frame = +3
Query: 30 VAKELRQHGISADYYHADMDVNAREKVHMRWSSNRLQVIVGTV 158
VAKELR+ GISADYYHADMDVNARE+VH+RWS+++LQVIVGTV
Sbjct: 329 VAKELRERGISADYYHADMDVNARERVHLRWSNSKLQVIVGTV 371
Score = 63.5 bits (153), Expect(2) = 4e-26
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 218 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 304
VAFGMGINKPDVRFVIHHSLSKSMETYYQ
Sbjct: 371 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 399
>ref|XP_004512366.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Cicer arietinum]
Length = 704
Score = 80.1 bits (196), Expect(2) = 4e-26
Identities = 37/43 (86%), Positives = 41/43 (95%)
Frame = +3
Query: 30 VAKELRQHGISADYYHADMDVNAREKVHMRWSSNRLQVIVGTV 158
VAKELR+ GISAD+YHADMDVN REKVHMRWS+N+LQVIVGTV
Sbjct: 330 VAKELRERGISADHYHADMDVNNREKVHMRWSNNKLQVIVGTV 372
Score = 63.5 bits (153), Expect(2) = 4e-26
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 218 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 304
VAFGMGINKPDVRFVIHHSLSKSMETYYQ
Sbjct: 372 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 400
>gb|AAF24590.1|AC007654_6 T19E23.16 [Arabidopsis thaliana]
Length = 849
Score = 76.3 bits (186), Expect(2) = 2e-25
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = +3
Query: 30 VAKELRQHGISADYYHADMDVNAREKVHMRWSSNRLQVIVGTV 158
+A +LR+ GISADYYHADMD N REKVHMRWS N+LQVIVGTV
Sbjct: 376 IAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVGTV 418
Score = 65.1 bits (157), Expect(2) = 2e-25
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = +2
Query: 218 VAFGMGINKPDVRFVIHHSLSKSMETYYQV 307
VAFGMGINKPDVRFVIHHSLSKSMETYYQV
Sbjct: 418 VAFGMGINKPDVRFVIHHSLSKSMETYYQV 447
>ref|XP_006306861.1| hypothetical protein CARUB_v10008406mg [Capsella rubella]
gi|482575572|gb|EOA39759.1| hypothetical protein
CARUB_v10008406mg [Capsella rubella]
Length = 738
Score = 77.8 bits (190), Expect(2) = 2e-25
Identities = 35/43 (81%), Positives = 39/43 (90%)
Frame = +3
Query: 30 VAKELRQHGISADYYHADMDVNAREKVHMRWSSNRLQVIVGTV 158
+A +LR+ GISADYYHADMDVN REKVHMRWS N+LQVIVGTV
Sbjct: 365 IAGDLRERGISADYYHADMDVNMREKVHMRWSKNKLQVIVGTV 407
Score = 63.5 bits (153), Expect(2) = 2e-25
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 218 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 304
VAFGMGINKPDVRFVIHHSLSKSMETYYQ
Sbjct: 407 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 435
>ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family protein expressed [Medicago
truncatula] gi|355513912|gb|AES95535.1| ATP-dependent
DNA helicase RecQ family protein expressed [Medicago
truncatula]
Length = 685
Score = 77.4 bits (189), Expect(2) = 3e-25
Identities = 36/43 (83%), Positives = 40/43 (93%)
Frame = +3
Query: 30 VAKELRQHGISADYYHADMDVNAREKVHMRWSSNRLQVIVGTV 158
VAKELR+ GISA +YHADMDVN REKVHMRWS+N+LQVIVGTV
Sbjct: 312 VAKELRERGISAGHYHADMDVNDREKVHMRWSNNKLQVIVGTV 354
Score = 63.5 bits (153), Expect(2) = 3e-25
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 218 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 304
VAFGMGINKPDVRFVIHHSLSKSMETYYQ
Sbjct: 354 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 382
>ref|XP_007158129.1| hypothetical protein PHAVU_002G126800g [Phaseolus vulgaris]
gi|561031544|gb|ESW30123.1| hypothetical protein
PHAVU_002G126800g [Phaseolus vulgaris]
Length = 702
Score = 76.6 bits (187), Expect(2) = 5e-25
Identities = 36/43 (83%), Positives = 40/43 (93%)
Frame = +3
Query: 30 VAKELRQHGISADYYHADMDVNAREKVHMRWSSNRLQVIVGTV 158
VAKELR+ ISADYYHADMDV AR+KVHMRWS+N+LQVIVGTV
Sbjct: 327 VAKELRERRISADYYHADMDVIARQKVHMRWSNNKLQVIVGTV 369
Score = 63.5 bits (153), Expect(2) = 5e-25
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 218 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 304
VAFGMGINKPDVRFVIHHSLSKSMETYYQ
Sbjct: 369 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 397
>gb|EPS68779.1| hypothetical protein M569_05989, partial [Genlisea aurea]
Length = 487
Score = 75.1 bits (183), Expect(3) = 5e-25
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = +3
Query: 30 VAKELRQHGISADYYHADMDVNAREKVHMRWSSNRLQVIVGTV 158
VAKELR GISADYYHADMDV ARE VHMRWS ++LQVIVGTV
Sbjct: 329 VAKELRNRGISADYYHADMDVVARENVHMRWSISKLQVIVGTV 371
Score = 63.5 bits (153), Expect(3) = 5e-25
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 218 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 304
VAFGMGINKPDVRFVIHHSLSKSMETYYQ
Sbjct: 371 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 399
Score = 21.6 bits (44), Expect(3) = 5e-25
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +1
Query: 1 SRKECEQKCRLQRN 42
SRKECEQ + RN
Sbjct: 322 SRKECEQVAKELRN 335
>ref|NP_174421.2| mediator of RNA polymerase II transcription subunit 34 [Arabidopsis
thaliana] gi|75334308|sp|Q9FT73.1|MED34_ARATH RecName:
Full=Mediator of RNA polymerase II transcription subunit
34; AltName: Full=ATP-dependent DNA helicase Q-like 2;
AltName: Full=RecQ-like protein 2; Short=AtRecQ2;
Short=AtRecQl2 gi|11121445|emb|CAC14866.1| DNA Helicase
[Arabidopsis thaliana] gi|332193225|gb|AEE31346.1|
mediator of RNA polymerase II transcription subunit 34
[Arabidopsis thaliana]
Length = 705
Score = 76.3 bits (186), Expect(2) = 6e-25
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = +3
Query: 30 VAKELRQHGISADYYHADMDVNAREKVHMRWSSNRLQVIVGTV 158
+A +LR+ GISADYYHADMD N REKVHMRWS N+LQVIVGTV
Sbjct: 329 IAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVGTV 371
Score = 63.5 bits (153), Expect(2) = 6e-25
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 218 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 304
VAFGMGINKPDVRFVIHHSLSKSMETYYQ
Sbjct: 371 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 399
>ref|XP_002893846.1| RECQL2 [Arabidopsis lyrata subsp. lyrata]
gi|297339688|gb|EFH70105.1| RECQL2 [Arabidopsis lyrata
subsp. lyrata]
Length = 704
Score = 76.3 bits (186), Expect(2) = 6e-25
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = +3
Query: 30 VAKELRQHGISADYYHADMDVNAREKVHMRWSSNRLQVIVGTV 158
+A +LR+ GISADYYHADMD N REKVHMRWS N+LQVIVGTV
Sbjct: 328 IAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVGTV 370
Score = 63.5 bits (153), Expect(2) = 6e-25
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 218 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 304
VAFGMGINKPDVRFVIHHSLSKSMETYYQ
Sbjct: 370 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 398
>ref|NP_001077639.1| mediator of RNA polymerase II transcription subunit 34 [Arabidopsis
thaliana] gi|332193226|gb|AEE31347.1| mediator of RNA
polymerase II transcription subunit 34 [Arabidopsis
thaliana]
Length = 580
Score = 76.3 bits (186), Expect(2) = 6e-25
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = +3
Query: 30 VAKELRQHGISADYYHADMDVNAREKVHMRWSSNRLQVIVGTV 158
+A +LR+ GISADYYHADMD N REKVHMRWS N+LQVIVGTV
Sbjct: 204 IAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVGTV 246
Score = 63.5 bits (153), Expect(2) = 6e-25
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2
Query: 218 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 304
VAFGMGINKPDVRFVIHHSLSKSMETYYQ
Sbjct: 246 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 274
>ref|XP_004246059.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Solanum lycopersicum]
Length = 708
Score = 76.3 bits (186), Expect(2) = 8e-25
Identities = 34/43 (79%), Positives = 41/43 (95%)
Frame = +3
Query: 30 VAKELRQHGISADYYHADMDVNAREKVHMRWSSNRLQVIVGTV 158
VA+ELR+ GISAD+YHADMDVNARE+VH+RWS+ +LQVIVGTV
Sbjct: 329 VAQELRERGISADHYHADMDVNARERVHLRWSNGKLQVIVGTV 371
Score = 63.2 bits (152), Expect(2) = 8e-25
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +2
Query: 218 VAFGMGINKPDVRFVIHHSLSKSMETYYQ 304
VAFGMGINKPDVRFV+HHSLSKSMETYYQ
Sbjct: 371 VAFGMGINKPDVRFVVHHSLSKSMETYYQ 399