BLASTX nr result
ID: Cocculus22_contig00026105
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00026105
(620 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera] 67 9e-15
gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-... 68 1e-14
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc... 68 1e-14
emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera] 68 1e-14
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 68 1e-14
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 65 2e-14
emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera] 68 2e-14
emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera] 59 3e-14
emb|CAN64288.1| hypothetical protein VITISV_022326 [Vitis vinifera] 64 5e-14
emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera] 64 5e-14
emb|CAN66823.1| hypothetical protein VITISV_003499 [Vitis vinifera] 65 5e-14
gb|AAX96308.1| retrotransposon protein, putative, Ty1-copia sub-... 66 1e-13
gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana] 66 1e-13
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 62 1e-13
emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera] 63 1e-13
emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera] 62 2e-13
gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group... 61 2e-13
gb|AGV40508.1| hypothetical protein [Phaseolus vulgaris] 57 2e-13
emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group] 64 2e-13
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 62 3e-13
>emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]
Length = 731
Score = 66.6 bits (161), Expect(2) = 9e-15
Identities = 29/45 (64%), Positives = 39/45 (86%)
Frame = -3
Query: 330 TIRLVLTLAISKGWDVKQLDVNNAFLNGDLQEKVYVVQPLDFEDP 196
TIR+VLTLAI++GW+++QLD+NNAFLNG LQE V++ +P DF P
Sbjct: 366 TIRVVLTLAIAQGWEIRQLDINNAFLNGYLQENVFMSEPKDFIHP 410
Score = 39.7 bits (91), Expect(2) = 9e-15
Identities = 15/31 (48%), Positives = 25/31 (80%)
Frame = -2
Query: 160 YGLKQAPQSWYEKLRPALFHLGFKAAETGAS 68
YGLKQAP++W+++L+ AL GF+ +++ AS
Sbjct: 424 YGLKQAPRAWFDRLKDALLQWGFQDSKSNAS 454
>gb|AAX96193.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group]
Length = 1621
Score = 68.2 bits (165), Expect(2) = 1e-14
Identities = 29/47 (61%), Positives = 41/47 (87%)
Frame = -3
Query: 336 SVTIRLVLTLAISKGWDVKQLDVNNAFLNGDLQEKVYVVQPLDFEDP 196
+ TIR++L+LA+SKGW ++QLDV NAFL+G L+E+VY++QP FEDP
Sbjct: 754 AATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDP 800
Score = 37.7 bits (86), Expect(2) = 1e-14
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -2
Query: 160 YGLKQAPQSWYEKLRPALFHLGFKAAETGAS 68
YGLKQAP++W+ +L L LGFK ++ S
Sbjct: 814 YGLKQAPRAWFSRLSKKLMDLGFKGSKADTS 844
>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1478
Score = 68.2 bits (165), Expect(2) = 1e-14
Identities = 29/47 (61%), Positives = 41/47 (87%)
Frame = -3
Query: 336 SVTIRLVLTLAISKGWDVKQLDVNNAFLNGDLQEKVYVVQPLDFEDP 196
+ TIR++L+LA+SKGW ++QLDV NAFL+G L+E+VY++QP FEDP
Sbjct: 1025 AATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDP 1071
Score = 37.7 bits (86), Expect(2) = 1e-14
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -2
Query: 160 YGLKQAPQSWYEKLRPALFHLGFKAAETGAS 68
YGLKQAP++W+ +L L LGFK ++ S
Sbjct: 1085 YGLKQAPRAWFSRLSKKLMDLGFKGSKADTS 1115
>emb|CAN71553.1| hypothetical protein VITISV_034738 [Vitis vinifera]
Length = 1312
Score = 68.2 bits (165), Expect(2) = 1e-14
Identities = 30/44 (68%), Positives = 39/44 (88%)
Frame = -3
Query: 330 TIRLVLTLAISKGWDVKQLDVNNAFLNGDLQEKVYVVQPLDFED 199
TIRLVL++A+S W +KQLDV+NAFLNGDLQE+V+++QP FED
Sbjct: 888 TIRLVLSIAVSSNWPIKQLDVHNAFLNGDLQEQVFMMQPPGFED 931
Score = 37.7 bits (86), Expect(2) = 1e-14
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -2
Query: 160 YGLKQAPQSWYEKLRPALFHLGFKAAETGAS 68
YGLKQAP++W+ KL L +GF+ + AS
Sbjct: 946 YGLKQAPRAWFHKLSSFLLQIGFQCSRADAS 976
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 68.2 bits (165), Expect(2) = 1e-14
Identities = 29/47 (61%), Positives = 41/47 (87%)
Frame = -3
Query: 336 SVTIRLVLTLAISKGWDVKQLDVNNAFLNGDLQEKVYVVQPLDFEDP 196
+ TIR++L+LA+SKGW ++QLDV NAFL+G L+E+VY++QP FEDP
Sbjct: 1032 AATIRIILSLAVSKGWSLRQLDVQNAFLHGYLEEEVYMLQPPGFEDP 1078
Score = 37.4 bits (85), Expect(2) = 1e-14
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -2
Query: 160 YGLKQAPQSWYEKLRPALFHLGFKAAETGAS 68
YGLKQAP++W+ +L L LGFK ++ S
Sbjct: 1092 YGLKQAPRAWFSRLSKKLMDLGFKGSKPDTS 1122
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 64.7 bits (156), Expect(2) = 2e-14
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = -3
Query: 330 TIRLVLTLAISKGWDVKQLDVNNAFLNGDLQEKVYVVQPLDFED 199
T+R+V T+A+S+ W +KQLDVNNAFLNGDLQE+V++ QP F D
Sbjct: 1026 TVRVVFTIALSRNWAIKQLDVNNAFLNGDLQEEVFMQQPQGFID 1069
Score = 40.0 bits (92), Expect(2) = 2e-14
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = -2
Query: 160 YGLKQAPQSWYEKLRPALFHLGFKAAETGAS 68
YGLKQAP++W+EKL AL GF +A++ S
Sbjct: 1084 YGLKQAPRAWFEKLHRALLSFGFVSAKSDQS 1114
>emb|CAN75478.1| hypothetical protein VITISV_020209 [Vitis vinifera]
Length = 1074
Score = 68.2 bits (165), Expect(2) = 2e-14
Identities = 30/44 (68%), Positives = 39/44 (88%)
Frame = -3
Query: 330 TIRLVLTLAISKGWDVKQLDVNNAFLNGDLQEKVYVVQPLDFED 199
TIRLVL++A+S W +KQLDV+NAFLNGDLQE+V+++QP FED
Sbjct: 634 TIRLVLSIAVSSNWPIKQLDVHNAFLNGDLQEQVFMMQPPGFED 677
Score = 36.6 bits (83), Expect(2) = 2e-14
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -2
Query: 160 YGLKQAPQSWYEKLRPALFHLGFKAAETGAS 68
YGLKQ P++W+ KL L +GF+ + AS
Sbjct: 692 YGLKQGPRAWFHKLSSFLLQIGFQCSRANAS 722
>emb|CAN62863.1| hypothetical protein VITISV_030334 [Vitis vinifera]
Length = 1442
Score = 59.3 bits (142), Expect(3) = 3e-14
Identities = 25/44 (56%), Positives = 35/44 (79%)
Frame = -3
Query: 330 TIRLVLTLAISKGWDVKQLDVNNAFLNGDLQEKVYVVQPLDFED 199
TIR VLT+A+ GW ++Q+D+NNAFL+G L E VY++QP F+D
Sbjct: 955 TIRCVLTIAVMNGWPLRQMDINNAFLHGTLTETVYMMQPPGFKD 998
Score = 43.1 bits (100), Expect(3) = 3e-14
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = -2
Query: 160 YGLKQAPQSWYEKLRPALFHLGFKAAETGAS 68
YGL+QAP++WY LR ALF LGFK ++ +S
Sbjct: 1013 YGLRQAPRAWYTTLRTALFQLGFKNSKADSS 1043
Score = 21.6 bits (44), Expect(3) = 3e-14
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -1
Query: 68 LFVIAHSSRLMFVLVYVD 15
LF+ H + + LVYVD
Sbjct: 1044 LFIYTHGPIICYFLVYVD 1061
>emb|CAN64288.1| hypothetical protein VITISV_022326 [Vitis vinifera]
Length = 1508
Score = 63.9 bits (154), Expect(2) = 5e-14
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = -3
Query: 330 TIRLVLTLAISKGWDVKQLDVNNAFLNGDLQEKVYVVQPLDFEDP 196
TIRL+LTLA+S W ++QLDV NAFLNGDLQE+V++ QP F P
Sbjct: 1099 TIRLILTLAVSFQWXIRQLDVENAFLNGDLQEEVFMAQPQGFVHP 1143
Score = 39.7 bits (91), Expect(2) = 5e-14
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -2
Query: 160 YGLKQAPQSWYEKLRPALFHLGFKAAETGAS 68
YGLKQAP++W++KLR AL GF+++ S
Sbjct: 1157 YGLKQAPRAWFQKLRVALVDYGFQSSRVDTS 1187
>emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera]
Length = 1138
Score = 63.5 bits (153), Expect(2) = 5e-14
Identities = 28/44 (63%), Positives = 36/44 (81%)
Frame = -3
Query: 330 TIRLVLTLAISKGWDVKQLDVNNAFLNGDLQEKVYVVQPLDFED 199
TIR+V T+A+S+ W +KQLDVNN FLNGDLQE+V++ QP F D
Sbjct: 784 TIRVVFTIALSRNWAIKQLDVNNTFLNGDLQEEVFMQQPQGFID 827
Score = 40.0 bits (92), Expect(2) = 5e-14
Identities = 17/31 (54%), Positives = 23/31 (74%)
Frame = -2
Query: 160 YGLKQAPQSWYEKLRPALFHLGFKAAETGAS 68
YGLKQAP++W+EKL AL GF +A++ S
Sbjct: 842 YGLKQAPRAWFEKLHRALLSFGFVSAKSDQS 872
>emb|CAN66823.1| hypothetical protein VITISV_003499 [Vitis vinifera]
Length = 763
Score = 64.7 bits (156), Expect(2) = 5e-14
Identities = 28/48 (58%), Positives = 39/48 (81%)
Frame = -3
Query: 330 TIRLVLTLAISKGWDVKQLDVNNAFLNGDLQEKVYVVQPLDFEDPHSS 187
TIR+VLT+ +S+ W ++QLD+NNAFLNGDLQE+VY+ QP F + +S
Sbjct: 519 TIRVVLTITLSRNWKIQQLDINNAFLNGDLQEEVYMEQPKGFIEKSTS 566
Score = 38.9 bits (89), Expect(2) = 5e-14
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = -2
Query: 166 SWYGLKQAPQSWYEKLRPALFHLGFKAAE 80
S YGLKQ P++W+EKL AL LGF +A+
Sbjct: 575 SLYGLKQVPRAWFEKLYEALVGLGFTSAK 603
>gb|AAX96308.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
sativa Japonica Group] gi|77548933|gb|ABA91730.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1094
Score = 65.9 bits (159), Expect(3) = 1e-13
Identities = 28/47 (59%), Positives = 40/47 (85%)
Frame = -3
Query: 336 SVTIRLVLTLAISKGWDVKQLDVNNAFLNGDLQEKVYVVQPLDFEDP 196
+ TIR++L+LA+S+GW ++QLDV NAFL+G L+E+VY+ QP FEDP
Sbjct: 683 AATIRIILSLAVSRGWSLRQLDVQNAFLHGYLEEEVYMQQPPGFEDP 729
Score = 33.5 bits (75), Expect(3) = 1e-13
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -2
Query: 160 YGLKQAPQSWYEKLRPALFHLGFKAAE 80
YGLKQAP++W+ +L L LGF ++
Sbjct: 743 YGLKQAPRAWFARLSKKLTDLGFSGSK 769
Score = 22.7 bits (47), Expect(3) = 1e-13
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 95 FQGCRNWCFLFVIAHSSRLMFVLVYVD 15
F G + LF + +FVLVYVD
Sbjct: 765 FSGSKADTLLFFLNRGGVTIFVLVYVD 791
>gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thaliana]
Length = 1534
Score = 66.2 bits (160), Expect(2) = 1e-13
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = -3
Query: 336 SVTIRLVLTLAISKGWDVKQLDVNNAFLNGDLQEKVYVVQPLDFEDP 196
S+TIRLVL LA+S+ W +KQLDVNNAFL G L ++VYV QP F DP
Sbjct: 1112 SLTIRLVLQLAVSRSWTIKQLDVNNAFLQGTLTDEVYVTQPPGFIDP 1158
Score = 36.2 bits (82), Expect(2) = 1e-13
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = -2
Query: 172 KLSWYGLKQAPQSWYEKLRPALFHLGF 92
K + YGLKQAP++WY++LR + LGF
Sbjct: 1168 KKALYGLKQAPRAWYQELRNFVCSLGF 1194
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 62.4 bits (150), Expect(2) = 1e-13
Identities = 28/45 (62%), Positives = 36/45 (80%)
Frame = -3
Query: 330 TIRLVLTLAISKGWDVKQLDVNNAFLNGDLQEKVYVVQPLDFEDP 196
TIR+VLT+A++ W V+QLDVNNAFLNGDL E +++ QP F DP
Sbjct: 972 TIRIVLTIALNLQWKVRQLDVNNAFLNGDLHEDIFMHQPQGFIDP 1016
Score = 40.0 bits (92), Expect(2) = 1e-13
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = -2
Query: 166 SWYGLKQAPQSWYEKLRPALFHLGFKAAETGAS 68
S YGLKQAP++W+EKL AL LGF + ++ S
Sbjct: 1028 SLYGLKQAPRAWFEKLHQALGILGFSSTKSDQS 1060
>emb|CAN67247.1| hypothetical protein VITISV_008682 [Vitis vinifera]
Length = 1270
Score = 62.8 bits (151), Expect(2) = 1e-13
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = -3
Query: 330 TIRLVLTLAISKGWDVKQLDVNNAFLNGDLQEKVYVVQPLDFEDP 196
TIRL+L LA+S W ++QLDV NAFLNGDLQE+V++ QP F P
Sbjct: 829 TIRLILALAVSFQWPIRQLDVENAFLNGDLQEEVFIAQPQGFVHP 873
Score = 39.7 bits (91), Expect(2) = 1e-13
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -2
Query: 160 YGLKQAPQSWYEKLRPALFHLGFKAAETGAS 68
YGLKQAP++W++KLR AL GF+++ S
Sbjct: 887 YGLKQAPRAWFQKLRVALVDYGFQSSRADTS 917
>emb|CAN73924.1| hypothetical protein VITISV_041509 [Vitis vinifera]
Length = 1434
Score = 62.4 bits (150), Expect(2) = 2e-13
Identities = 28/45 (62%), Positives = 36/45 (80%)
Frame = -3
Query: 330 TIRLVLTLAISKGWDVKQLDVNNAFLNGDLQEKVYVVQPLDFEDP 196
TIRL+L LA+S W V+QLDV NAFLNGDL+E+V++ QP F +P
Sbjct: 948 TIRLILALAVSFQWSVRQLDVENAFLNGDLEEEVFMTQPQGFVNP 992
Score = 39.7 bits (91), Expect(2) = 2e-13
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -2
Query: 160 YGLKQAPQSWYEKLRPALFHLGFKAAETGAS 68
YGLKQAP++W++KLR AL GF+++ S
Sbjct: 1006 YGLKQAPRAWFQKLRIALLDYGFQSSRADTS 1036
>gb|AAT69582.1| putative polyprotein [Oryza sativa Japonica Group]
gi|52353546|gb|AAU44112.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1256
Score = 60.8 bits (146), Expect(2) = 2e-13
Identities = 25/46 (54%), Positives = 39/46 (84%)
Frame = -3
Query: 336 SVTIRLVLTLAISKGWDVKQLDVNNAFLNGDLQEKVYVVQPLDFED 199
+ TIR++L++A+S+GW ++QLDV NAFL+G L+E+VY+ QP +ED
Sbjct: 835 AATIRIILSIAVSRGWTLRQLDVQNAFLHGILEEEVYMKQPPGYED 880
Score = 40.8 bits (94), Expect(2) = 2e-13
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -2
Query: 160 YGLKQAPQSWYEKLRPALFHLGFKAAETGAS 68
YGLKQAP++WY KL L HLGF+ ++ S
Sbjct: 895 YGLKQAPRAWYAKLSQKLQHLGFQGSKADTS 925
>gb|AGV40508.1| hypothetical protein [Phaseolus vulgaris]
Length = 1121
Score = 57.0 bits (136), Expect(2) = 2e-13
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Frame = -3
Query: 330 TIRLVLTLAISKGWDVKQLDVNNAFLNGDLQEKVYVVQPLDFE--DPH 193
TIRLVL +S W ++Q+D+NNAFLNGDLQE V++ QP F PH
Sbjct: 778 TIRLVLAHVVSSRWSIRQIDINNAFLNGDLQECVFMQQPPGFNTTTPH 825
Score = 44.7 bits (104), Expect(2) = 2e-13
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = -2
Query: 160 YGLKQAPQSWYEKLRPALFHLGFKAAETGAS 68
YGLKQAP+SW+ KL LFHLGFK ++ S
Sbjct: 835 YGLKQAPRSWFLKLSTTLFHLGFKPTKSDTS 865
>emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]
Length = 1087
Score = 64.3 bits (155), Expect(2) = 2e-13
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = -3
Query: 330 TIRLVLTLAISKGWDVKQLDVNNAFLNGDLQEKVYVVQPLDFEDPHSS 187
TIRLVL+LA+SKGW ++QLDV NAFL+G L+E+VY+ QP + D SS
Sbjct: 727 TIRLVLSLAVSKGWSIRQLDVKNAFLHGILEEEVYMKQPPGYVDKSSS 774
Score = 37.4 bits (85), Expect(2) = 2e-13
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = -2
Query: 160 YGLKQAPQSWYEKLRPALFHLGFKAAETGAS 68
YGLKQAP++WY +L L LGF A++ S
Sbjct: 785 YGLKQAPRAWYYRLYDKLCQLGFSASKADTS 815
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 62.4 bits (150), Expect(2) = 3e-13
Identities = 26/47 (55%), Positives = 40/47 (85%)
Frame = -3
Query: 336 SVTIRLVLTLAISKGWDVKQLDVNNAFLNGDLQEKVYVVQPLDFEDP 196
+ TIR++LT+A+S W+++QLDV+NAFLNG+L+E+VY+ QP + DP
Sbjct: 975 AATIRIILTVALSFKWEIRQLDVHNAFLNGELEEQVYMSQPPGYFDP 1021
Score = 38.9 bits (89), Expect(2) = 3e-13
Identities = 16/35 (45%), Positives = 24/35 (68%)
Frame = -2
Query: 172 KLSWYGLKQAPQSWYEKLRPALFHLGFKAAETGAS 68
K + YGLKQAP++W+++L AL GF + T +S
Sbjct: 1031 KKALYGLKQAPRAWFQRLSSALLQWGFSMSRTDSS 1065