BLASTX nr result

ID: Cocculus22_contig00026092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00026092
         (474 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258...    78   1e-12
emb|CBI40768.3| unnamed protein product [Vitis vinifera]               78   1e-12
ref|XP_006473858.1| PREDICTED: RNA-binding protein 24-B-like iso...    77   2e-12
ref|XP_006473857.1| PREDICTED: RNA-binding protein 24-B-like iso...    77   2e-12
ref|XP_006435451.1| hypothetical protein CICLE_v10003364mg [Citr...    77   2e-12
ref|XP_007018664.1| RNA-binding (RRM/RBD/RNP motifs) family prot...    77   2e-12
ref|XP_007018663.1| RNA-binding family protein isoform 1 [Theobr...    77   2e-12
ref|XP_002300621.1| RNA recognition motif-containing family prot...    77   2e-12
ref|XP_002307819.1| RNA recognition motif-containing family prot...    77   3e-12
ref|XP_007135985.1| hypothetical protein PHAVU_009G008600g [Phas...    76   4e-12
ref|XP_004500827.1| PREDICTED: RNA-binding protein 24-A-like [Ci...    76   4e-12
ref|XP_003603877.1| RNA-binding protein 24-B [Medicago truncatul...    76   4e-12
ref|XP_006581126.1| PREDICTED: RNA-binding protein 24-B-like iso...    75   9e-12
ref|XP_006581125.1| PREDICTED: RNA-binding protein 24-B-like iso...    75   9e-12
ref|XP_007209452.1| hypothetical protein PRUPE_ppa009716mg [Prun...    75   9e-12
ref|XP_004146763.1| PREDICTED: RNA-binding protein Musashi homol...    75   9e-12
ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-A-like [Gl...    75   9e-12
gb|EXB56267.1| RNA-binding protein 24 [Morus notabilis]                75   1e-11
ref|XP_002889085.1| RNA recognition motif-containing protein [Ar...    75   1e-11
ref|XP_007202445.1| hypothetical protein PRUPE_ppa009964mg [Prun...    74   2e-11

>ref|XP_002273353.2| PREDICTED: uncharacterized protein LOC100258188 [Vitis vinifera]
          Length = 346

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 39/58 (67%), Positives = 43/58 (74%)
 Frame = -3

Query: 175 MSYQWTPAPXXXXXXXXXXGFQILQSPFGDTTYTKVFVGGLAWETQSDTLRRHFEQFG 2
           M+YQ  P P          GFQ L SPFGDTTYTKVFVGGLAWETQS+T+RR+FEQFG
Sbjct: 1   MAYQ--PIPGPSSGSSSSSGFQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFG 56


>emb|CBI40768.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 39/58 (67%), Positives = 43/58 (74%)
 Frame = -3

Query: 175 MSYQWTPAPXXXXXXXXXXGFQILQSPFGDTTYTKVFVGGLAWETQSDTLRRHFEQFG 2
           M+YQ  P P          GFQ L SPFGDTTYTKVFVGGLAWETQS+T+RR+FEQFG
Sbjct: 1   MAYQ--PIPGPSSGSSSSSGFQFLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFG 56


>ref|XP_006473858.1| PREDICTED: RNA-binding protein 24-B-like isoform X2 [Citrus
           sinensis] gi|568839785|ref|XP_006473859.1| PREDICTED:
           RNA-binding protein 24-B-like isoform X3 [Citrus
           sinensis] gi|568839787|ref|XP_006473860.1| PREDICTED:
           RNA-binding protein 24-B-like isoform X4 [Citrus
           sinensis]
          Length = 163

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 38/58 (65%), Positives = 42/58 (72%)
 Frame = -3

Query: 175 MSYQWTPAPXXXXXXXXXXGFQILQSPFGDTTYTKVFVGGLAWETQSDTLRRHFEQFG 2
           M+YQ  P P           FQ L SPFGDTTYTKVFVGGLAWETQS+T+RR+FEQFG
Sbjct: 1   MAYQSIPGPGSGSSSSSG--FQYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFG 56


>ref|XP_006473857.1| PREDICTED: RNA-binding protein 24-B-like isoform X1 [Citrus
           sinensis]
          Length = 281

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 38/58 (65%), Positives = 42/58 (72%)
 Frame = -3

Query: 175 MSYQWTPAPXXXXXXXXXXGFQILQSPFGDTTYTKVFVGGLAWETQSDTLRRHFEQFG 2
           M+YQ  P P           FQ L SPFGDTTYTKVFVGGLAWETQS+T+RR+FEQFG
Sbjct: 1   MAYQSIPGPGSGSSSSSG--FQYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFG 56


>ref|XP_006435451.1| hypothetical protein CICLE_v10003364mg [Citrus clementina]
           gi|557537573|gb|ESR48691.1| hypothetical protein
           CICLE_v10003364mg [Citrus clementina]
          Length = 268

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 38/58 (65%), Positives = 42/58 (72%)
 Frame = -3

Query: 175 MSYQWTPAPXXXXXXXXXXGFQILQSPFGDTTYTKVFVGGLAWETQSDTLRRHFEQFG 2
           M+YQ  P P           FQ L SPFGDTTYTKVFVGGLAWETQS+T+RR+FEQFG
Sbjct: 1   MAYQSIPGPGSGSSSSSG--FQYLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFG 56


>ref|XP_007018664.1| RNA-binding (RRM/RBD/RNP motifs) family protein isoform 2
           [Theobroma cacao] gi|508723992|gb|EOY15889.1|
           RNA-binding (RRM/RBD/RNP motifs) family protein isoform
           2 [Theobroma cacao]
          Length = 284

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 38/58 (65%), Positives = 43/58 (74%)
 Frame = -3

Query: 175 MSYQWTPAPXXXXXXXXXXGFQILQSPFGDTTYTKVFVGGLAWETQSDTLRRHFEQFG 2
           M+YQ  P P          GFQ + SPFGDTTYTKVFVGGLAWETQS+T+RR+FEQFG
Sbjct: 1   MAYQ--PIPGPSSGSSSSSGFQYINSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFG 56


>ref|XP_007018663.1| RNA-binding family protein isoform 1 [Theobroma cacao]
           gi|508723991|gb|EOY15888.1| RNA-binding family protein
           isoform 1 [Theobroma cacao]
          Length = 319

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 38/58 (65%), Positives = 43/58 (74%)
 Frame = -3

Query: 175 MSYQWTPAPXXXXXXXXXXGFQILQSPFGDTTYTKVFVGGLAWETQSDTLRRHFEQFG 2
           M+YQ  P P          GFQ + SPFGDTTYTKVFVGGLAWETQS+T+RR+FEQFG
Sbjct: 1   MAYQ--PIPGPSSGSSSSSGFQYINSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFG 56


>ref|XP_002300621.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222842347|gb|EEE79894.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 287

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 37/58 (63%), Positives = 42/58 (72%)
 Frame = -3

Query: 175 MSYQWTPAPXXXXXXXXXXGFQILQSPFGDTTYTKVFVGGLAWETQSDTLRRHFEQFG 2
           M+YQ  P P           FQ + SPFGDTTYTKVFVGGLAWETQS+T+RR+FEQFG
Sbjct: 1   MAYQAVPGPSSGSSSSSG--FQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFG 56


>ref|XP_002307819.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|222857268|gb|EEE94815.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 286

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 37/58 (63%), Positives = 42/58 (72%)
 Frame = -3

Query: 175 MSYQWTPAPXXXXXXXXXXGFQILQSPFGDTTYTKVFVGGLAWETQSDTLRRHFEQFG 2
           M+YQ  P P           FQ + SPFGDTTYTKVFVGGLAWETQS+T+RR+FEQFG
Sbjct: 1   MAYQAIPGPSSGSSSSSG--FQYMNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFG 56


>ref|XP_007135985.1| hypothetical protein PHAVU_009G008600g [Phaseolus vulgaris]
           gi|561009072|gb|ESW07979.1| hypothetical protein
           PHAVU_009G008600g [Phaseolus vulgaris]
          Length = 283

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 33/38 (86%), Positives = 37/38 (97%)
 Frame = -3

Query: 115 FQILQSPFGDTTYTKVFVGGLAWETQSDTLRRHFEQFG 2
           FQ+L SPFGDTTYTKVFVGGLAWETQS+T+RR+FEQFG
Sbjct: 19  FQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFG 56


>ref|XP_004500827.1| PREDICTED: RNA-binding protein 24-A-like [Cicer arietinum]
          Length = 290

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 33/38 (86%), Positives = 37/38 (97%)
 Frame = -3

Query: 115 FQILQSPFGDTTYTKVFVGGLAWETQSDTLRRHFEQFG 2
           FQ+L SPFGDTTYTKVFVGGLAWETQS+T+RR+FEQFG
Sbjct: 19  FQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFG 56


>ref|XP_003603877.1| RNA-binding protein 24-B [Medicago truncatula]
           gi|355492925|gb|AES74128.1| RNA-binding protein 24-B
           [Medicago truncatula]
          Length = 371

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 33/38 (86%), Positives = 37/38 (97%)
 Frame = -3

Query: 115 FQILQSPFGDTTYTKVFVGGLAWETQSDTLRRHFEQFG 2
           FQ+L SPFGDTTYTKVFVGGLAWETQS+T+RR+FEQFG
Sbjct: 16  FQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFG 53


>ref|XP_006581126.1| PREDICTED: RNA-binding protein 24-B-like isoform X2 [Glycine max]
          Length = 276

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 32/38 (84%), Positives = 37/38 (97%)
 Frame = -3

Query: 115 FQILQSPFGDTTYTKVFVGGLAWETQSDTLRRHFEQFG 2
           FQ+L SPFGDTTYTKVFVGGLAWETQS+T+RR+F+QFG
Sbjct: 19  FQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFDQFG 56


>ref|XP_006581125.1| PREDICTED: RNA-binding protein 24-B-like isoform X1 [Glycine max]
          Length = 286

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 32/38 (84%), Positives = 37/38 (97%)
 Frame = -3

Query: 115 FQILQSPFGDTTYTKVFVGGLAWETQSDTLRRHFEQFG 2
           FQ+L SPFGDTTYTKVFVGGLAWETQS+T+RR+F+QFG
Sbjct: 19  FQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFDQFG 56


>ref|XP_007209452.1| hypothetical protein PRUPE_ppa009716mg [Prunus persica]
           gi|462405187|gb|EMJ10651.1| hypothetical protein
           PRUPE_ppa009716mg [Prunus persica]
          Length = 281

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 33/38 (86%), Positives = 35/38 (92%)
 Frame = -3

Query: 115 FQILQSPFGDTTYTKVFVGGLAWETQSDTLRRHFEQFG 2
           FQ L SPFGDTTYTKVFVGGLAWET SDT+RR+FEQFG
Sbjct: 17  FQFLNSPFGDTTYTKVFVGGLAWETHSDTMRRYFEQFG 54


>ref|XP_004146763.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cucumis
           sativus] gi|449531145|ref|XP_004172548.1| PREDICTED:
           RNA-binding protein Musashi homolog 2-like [Cucumis
           sativus]
          Length = 286

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 38/58 (65%), Positives = 42/58 (72%)
 Frame = -3

Query: 175 MSYQWTPAPXXXXXXXXXXGFQILQSPFGDTTYTKVFVGGLAWETQSDTLRRHFEQFG 2
           M+YQ  P P          GF  L SPFGDTTYTKVFVGGLAWETQS+T+RR+FEQFG
Sbjct: 1   MAYQHGPGPSSISGSSSSSGF--LNSPFGDTTYTKVFVGGLAWETQSETMRRYFEQFG 56


>ref|XP_003522980.1| PREDICTED: RNA-binding protein 24-A-like [Glycine max]
          Length = 286

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 32/38 (84%), Positives = 37/38 (97%)
 Frame = -3

Query: 115 FQILQSPFGDTTYTKVFVGGLAWETQSDTLRRHFEQFG 2
           FQ+L SPFGDTTYTKVFVGGLAWETQS+T+RR+F+QFG
Sbjct: 19  FQLLNSPFGDTTYTKVFVGGLAWETQSETMRRYFDQFG 56


>gb|EXB56267.1| RNA-binding protein 24 [Morus notabilis]
          Length = 286

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 33/37 (89%), Positives = 35/37 (94%)
 Frame = -3

Query: 112 QILQSPFGDTTYTKVFVGGLAWETQSDTLRRHFEQFG 2
           Q L SPFGDTTYTKVFVGGLAWETQSDT+RR+FEQFG
Sbjct: 23  QFLNSPFGDTTYTKVFVGGLAWETQSDTMRRYFEQFG 59


>ref|XP_002889085.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297334926|gb|EFH65344.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 283

 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 33/38 (86%), Positives = 35/38 (92%)
 Frame = -3

Query: 115 FQILQSPFGDTTYTKVFVGGLAWETQSDTLRRHFEQFG 2
           F  L SPFGDTT+TKVFVGGLAWETQS+TLRRHFEQFG
Sbjct: 11  FHYLNSPFGDTTFTKVFVGGLAWETQSETLRRHFEQFG 48


>ref|XP_007202445.1| hypothetical protein PRUPE_ppa009964mg [Prunus persica]
           gi|462397976|gb|EMJ03644.1| hypothetical protein
           PRUPE_ppa009964mg [Prunus persica]
          Length = 270

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = -3

Query: 112 QILQSPFGDTTYTKVFVGGLAWETQSDTLRRHFEQFG 2
           Q+  SPFGDTT TKVFVGGLAWETQSDTLRRHFEQFG
Sbjct: 25  QLFNSPFGDTTLTKVFVGGLAWETQSDTLRRHFEQFG 61


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