BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00026079
         (477 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   110   2e-22
gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subc...   107   1e-21
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   103   2e-20
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]      96   7e-18
gb|AAP21398.1| putative gag-pol polyprotein [Oryza sativa Japoni...    96   7e-18
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]    95   9e-18
gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc...    95   1e-17
emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]                 94   2e-17
gb|AAU90262.1| integrase core domain containing protein [Oryza s...    94   2e-17
gb|AAB82754.1| retrofit [Oryza longistaminata]                         93   3e-17
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi...    91   2e-16
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc...    91   2e-16
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...    90   3e-16
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc...    89   6e-16
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ...    89   6e-16
gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [...    89   6e-16
emb|CAN83304.1| hypothetical protein VITISV_008191 [Vitis vinifera]    89   8e-16
gb|ABA95065.1| retrotransposon protein, putative, Ty1-copia subc...    88   1e-15
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]    88   1e-15
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...    88   1e-15

>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  110 bits (276), Expect = 2e-22
 Identities = 68/173 (39%), Positives = 84/173 (48%), Gaps = 17/173 (9%)
 Frame = -2

Query: 470 GRTNFFPGGRGHY--YQSQSHRGG------------RSQWNSNKPRSQ--CQLCGKLGHV 339
           GR   F GGRG    Y  +S+RGG            R  WNS+    +  CQLCGK+GHV
Sbjct: 260 GRRGGFYGGRGFNWNYNGRSNRGGFRGRGNKGSFQARPPWNSDNQNEKPACQLCGKIGHV 319

Query: 338 AFNCWHRFEENF-VPHTYAQXXXXXXXXXXXXXXXXXXAMTATTHLQDNGDWFPDSGATN 162
              C++RF+  F VP   +                     T+     DN  W+PDSGA+N
Sbjct: 320 VAQCYYRFDHTFQVPQNLSSRNSSPRAYYSFSPQVNGVIPTSEVFSDDN--WYPDSGASN 377

Query: 161 HVTPDLSNLTIQTPYNGSEQVHVGDGNALPINHIGTSFFHPPSSSRILSLQHL 3
           HVTP+  NL     + G  QVHVG+G  L I HIG S F  P SS+ L L HL
Sbjct: 378 HVTPNPENLMKSAEFAGQNQVHVGNGTGLSIKHIGQSEFLSPFSSKPLLLNHL 430


>gb|ABG00000.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2074

 Score =  107 bits (268), Expect = 1e-21
 Identities = 56/151 (37%), Positives = 75/151 (49%), Gaps = 6/151 (3%)
 Frame = -2

Query: 470  GRTNFFPGGRGHYYQSQSHRGGRSQWN------SNKPRSQCQLCGKLGHVAFNCWHRFEE 309
            G T  F G  G     +  RGGR + N      SNKPRS CQLCGK+GHV  +CW+R++E
Sbjct: 1206 GNTGAFRGRGG----GRGDRGGRGRGNGGGARFSNKPRSTCQLCGKIGHVVADCWYRYDE 1261

Query: 308  NFVPHTYAQXXXXXXXXXXXXXXXXXXAMTATTHLQDNGDWFPDSGATNHVTPDLSNLTI 129
            NF+P +                        A      + +W+ D+GAT+H+T +L  LT 
Sbjct: 1262 NFIPDS---------------------KTAAAASYGVDTNWYMDTGATDHITGELDKLTT 1300

Query: 128  QTPYNGSEQVHVGDGNALPINHIGTSFFHPP 36
               YNG EQ+H   G  + I H+G S  H P
Sbjct: 1301 HEKYNGKEQIHTASGAGMDIKHVGHSIIHTP 1331


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  103 bits (257), Expect = 2e-20
 Identities = 58/156 (37%), Positives = 86/156 (55%), Gaps = 9/156 (5%)
 Frame = -2

Query: 443 RGHYYQSQSHRGGRSQWNSNKPRSQCQLCGKLGHVAFNCWHRFEENFVPHTYAQXXXXXX 264
           RG++ Q    R GR  W  N  + QCQLCG++GHV   C++RF+++F   +  Q      
Sbjct: 262 RGNFTQQGRGRHGRGSWKGNN-KPQCQLCGRIGHVVMQCYYRFDQSFTGPSQLQGNRPQG 320

Query: 263 XXXXXXXXXXXXAMTATTH--------LQDNGDWFPDSGATNHVTPDLSNLTIQTPYNGS 108
                           T          +QDN +W+PDSGAT+H+TP+L+NL  ++ +  S
Sbjct: 321 NMAHLHQQLSEXFFPGTPSVKPTTAEIIQDN-NWYPDSGATHHLTPNLNNLLTKSQFPSS 379

Query: 107 EQVHVGDGNALPINHIG-TSFFHPPSSSRILSLQHL 3
           ++V VG+G  LPI+HIG TSF      S+ L+L+ L
Sbjct: 380 DEVFVGNGKGLPIHHIGHTSFSSSFIPSKTLALKQL 415


>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1210

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 9/161 (5%)
 Frame = -2

Query: 473 GGRTNFFPGGRGHYYQSQSHRGGRSQ---------WNSNKPRSQCQLCGKLGHVAFNCWH 321
           GG  NF  GG   Y+ ++   GGR             + KPR  CQLC K+GHV  +CWH
Sbjct: 234 GGGGNFNNGGG--YFSNRGRGGGRGDRGGCGRGNGGRNFKPRPTCQLCSKVGHVVADCWH 291

Query: 320 RFEENFVPHTYAQXXXXXXXXXXXXXXXXXXAMTATTHLQDNGDWFPDSGATNHVTPDLS 141
            ++++FVP                        + A      + +W+ D+GAT+H+T +L 
Sbjct: 292 CYDDSFVPDA---------------------RVAAAASYGVDSNWYVDTGATDHITNELE 330

Query: 140 NLTIQTPYNGSEQVHVGDGNALPINHIGTSFFHPPSSSRIL 18
            LT +  YNG EQ+H   G+ + I HIG S    P+ +  L
Sbjct: 331 KLTTRDRYNGKEQIHTASGSGMDIKHIGQSTIRTPTRNLYL 371


>gb|AAP21398.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 461

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 53/142 (37%), Positives = 71/142 (50%), Gaps = 6/142 (4%)
 Frame = -2

Query: 470 GRTNFFPGGRGHYYQSQSHRGGRSQWN------SNKPRSQCQLCGKLGHVAFNCWHRFEE 309
           G T  F G  G     +  RGGR + N      SNKPRS CQLCGK+GHV  +CW+R++E
Sbjct: 127 GNTGAFRGRGG----GRGDRGGRGRGNGGGARFSNKPRSTCQLCGKIGHVVADCWYRYDE 182

Query: 308 NFVPHTYAQXXXXXXXXXXXXXXXXXXAMTATTHLQDNGDWFPDSGATNHVTPDLSNLTI 129
           NF+P +                        A      + +W+ D+GAT+H+T +L  LT 
Sbjct: 183 NFIPDS---------------------KTAAAASYGVDTNWYMDTGATDHITGELDKLTT 221

Query: 128 QTPYNGSEQVHVGDGNALPINH 63
              YNG EQ+H   G A+  NH
Sbjct: 222 HEKYNGKEQIHTASGAAVD-NH 242


>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
          Length = 1131

 Score = 95.1 bits (235), Expect = 9e-18
 Identities = 61/171 (35%), Positives = 89/171 (52%), Gaps = 18/171 (10%)
 Frame = -2

Query: 461 NFFPG-GRGHYYQSQSHRG---GRSQWNSNKPRS--------------QCQLCGKLGHVA 336
           NF  G GRGHY  +  + G   GR  +N++   S              QCQ+CGK GH+A
Sbjct: 207 NFGRGRGRGHYNNNGGNFGHGPGRGSFNNHSYSSRNFNNVSGGSNGKPQCQVCGKYGHIA 266

Query: 335 FNCWHRFEENFVPHTYAQXXXXXXXXXXXXXXXXXXAMTATTHLQDNGDWFPDSGATNHV 156
            NC+HRF++ + P                       AM AT     +  W+ D+GAT+H+
Sbjct: 267 INCYHRFDQTYQP----------------TMNNHLAAMVATPSTVGDESWYMDTGATHHL 310

Query: 155 TPDLSNLTIQTPYNGSEQVHVGDGNALPINHIGTSFFHPPSSSRILSLQHL 3
           TP+L+ L   TP+ GS++V VG+GN L I++IG S     S SR L+L+++
Sbjct: 311 TPNLNKLNSHTPFAGSDKVMVGNGNRLNISNIGHSTI--SSVSRSLNLKNI 359


>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 807

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 52/149 (34%), Positives = 74/149 (49%), Gaps = 7/149 (4%)
 Frame = -2

Query: 455 FPGG-------RGHYYQSQSHRGGRSQWNSNKPRSQCQLCGKLGHVAFNCWHRFEENFVP 297
           FPGG       RG  Y    +RG + + +   PR  CQ+C K GHVA  CWHRF+EN+VP
Sbjct: 215 FPGGNGGGGNSRGRGYTPARNRGNQQRVD---PRPICQVCYKRGHVAAKCWHRFDENYVP 271

Query: 296 HTYAQXXXXXXXXXXXXXXXXXXAMTATTHLQDNGDWFPDSGATNHVTPDLSNLTIQTPY 117
                                  A  A      + +W+ DSGAT+H+T +L  LT++  Y
Sbjct: 272 DE------------------RHVAAAAQAAYAVDTNWYIDSGATDHITSELDKLTVREKY 313

Query: 116 NGSEQVHVGDGNALPINHIGTSFFHPPSS 30
            G+E++H  +G  + I HIG +  H P +
Sbjct: 314 KGTEKIHTANGVGMQIKHIGHALVHTPDN 342


>emb|CAH67640.1| H0102C09.1 [Oryza sativa Indica Group]
          Length = 1825

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 48/127 (37%), Positives = 66/127 (51%)
 Frame = -2

Query: 413 RGGRSQWNSNKPRSQCQLCGKLGHVAFNCWHRFEENFVPHTYAQXXXXXXXXXXXXXXXX 234
           RG   Q  S   R  CQ+C K GHVA +CWHRF+E+FVP                     
Sbjct: 395 RGNNQQQRSYDNRPLCQVCYKRGHVAADCWHRFDEDFVP------------------DDK 436

Query: 233 XXAMTATTHLQDNGDWFPDSGATNHVTPDLSNLTIQTPYNGSEQVHVGDGNALPINHIGT 54
             A    TH +D+ +W+ D+GAT+H+T +L  LT +  Y G +Q+H   G+ + I HIG 
Sbjct: 437 LVAAAIHTHARDS-NWYVDTGATDHITSELEKLTARDVYKGHDQIHTASGSGMEIKHIGH 495

Query: 53  SFFHPPS 33
           S  H P+
Sbjct: 496 SIVHTPT 502


>gb|AAU90262.1| integrase core domain containing protein [Oryza sativa Japonica
           Group] gi|108710062|gb|ABF97857.1| retrotransposon
           protein, putative, Ty1-copia subclass, expressed [Oryza
           sativa Japonica Group]
          Length = 1021

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 53/156 (33%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
 Frame = -2

Query: 473 GGRTNFFPGGR------GHYYQSQSHRGGRSQWNSN---KPRSQCQLCGKLGHVAFNCWH 321
           GG T F  GGR      G    +   RGGR   N +   KP   C LCGK GHV  +CW+
Sbjct: 233 GGYTPFNRGGRSGGNNNGRRSNNGGGRGGRGNNNGDRGGKPHPVCHLCGKTGHVVADCWY 292

Query: 320 RFEENFVPHTYAQXXXXXXXXXXXXXXXXXXAMTATTHLQDNGDWFPDSGATNHVTPDLS 141
           R++ENFVP                        + A      + +W+ D+GAT+H+T +L 
Sbjct: 293 RYDENFVPEN---------------------KIAAAASYGVDTNWYVDTGATDHITGELD 331

Query: 140 NLTIQTPYNGSEQVHVGDGNALPINHIGTSFFHPPS 33
            LT +  YNG +Q++   G  + I HIG S    P+
Sbjct: 332 KLTTREKYNGKDQIYTASGAGMDIKHIGHSVICTPT 367


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 50/147 (34%), Positives = 71/147 (48%)
 Frame = -2

Query: 473 GGRTNFFPGGRGHYYQSQSHRGGRSQWNSNKPRSQCQLCGKLGHVAFNCWHRFEENFVPH 294
           GG     PGGRG   Q +  RG  +     +P   CQ+C K GH A +CW+RF+E++V  
Sbjct: 247 GGGGRSAPGGRGSGSQGRGGRGRGTGGQDRRPT--CQVCFKRGHTAADCWYRFDEDYVAD 304

Query: 293 TYAQXXXXXXXXXXXXXXXXXXAMTATTHLQDNGDWFPDSGATNHVTPDLSNLTIQTPYN 114
                                    AT     + +W+ D+GAT+H+T +L  LT +  YN
Sbjct: 305 E-------------------KLVAAATNSYGIDTNWYIDTGATDHITGELEKLTTKEKYN 345

Query: 113 GSEQVHVGDGNALPINHIGTSFFHPPS 33
           G EQ+H   G  + I+HIG +  H PS
Sbjct: 346 GGEQIHTASGAGMDISHIGHTIVHTPS 372


>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1149

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 58/159 (36%), Positives = 77/159 (48%), Gaps = 3/159 (1%)
 Frame = -2

Query: 476 KGGRTNFFPGG---RGHYYQSQSHRGGRSQWNSNKPRSQCQLCGKLGHVAFNCWHRFEEN 306
           +GGR N   G    RG  +Q Q      S   S KP   CQ+CGK GH A  CWHRF+++
Sbjct: 232 RGGRNNRGKGNFSTRGRGFQQQFSSSSSSVSASEKP--MCQICGKRGHYALQCWHRFDDS 289

Query: 305 FVPHTYAQXXXXXXXXXXXXXXXXXXAMTATTHLQDNGDWFPDSGATNHVTPDLSNLTIQ 126
           +  H+ A                        T + D+  W PDS AT H+T + S L   
Sbjct: 290 Y-QHSEAAAAAFSALHI--------------TDVSDDSGWVPDSAATAHITNNSSRLQQM 334

Query: 125 TPYNGSEQVHVGDGNALPINHIGTSFFHPPSSSRILSLQ 9
            PY G++ V   DGN LPI HIG++  + PS+S  L L+
Sbjct: 335 QPYLGNDTVMASDGNFLPITHIGSA--NLPSTSGNLPLK 371


>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1202

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 52/157 (33%), Positives = 80/157 (50%)
 Frame = -2

Query: 473 GGRTNFFPGGRGHYYQSQSHRGGRSQWNSNKPRSQCQLCGKLGHVAFNCWHRFEENFVPH 294
           GGR  F  GGRG    S + +G R + N  +P   CQ+C K GHVA +CWHR+++++VP 
Sbjct: 249 GGRGGFGRGGRGRGAPSGASQG-RGRGNDTRP--VCQVCHKRGHVASDCWHRYDDSYVP- 304

Query: 293 TYAQXXXXXXXXXXXXXXXXXXAMTATTHLQDNGDWFPDSGATNHVTPDLSNLTIQTPYN 114
                                    AT     + +W+ D+GAT+H+T  L  LT +  Y 
Sbjct: 305 ------------------DEKLGGAATYAYGIDTNWYVDTGATDHITGQLDKLTTKERYK 346

Query: 113 GSEQVHVGDGNALPINHIGTSFFHPPSSSRILSLQHL 3
           G++Q+H   G  + I H+G +    P+ SR L L+++
Sbjct: 347 GTDQIHTASGEGMSIKHVGHAIV--PTPSRPLHLKNV 381


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1460

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 51/151 (33%), Positives = 73/151 (48%)
 Frame = -2

Query: 473 GGRTNFFPGGRGHYYQSQSHRGGRSQWNSNKPRSQCQLCGKLGHVAFNCWHRFEENFVPH 294
           G R     GG G       H  GR+    +K R  CQ+C K GH A +CW+R++E++VP 
Sbjct: 244 GSRGGGGGGGHGRGNGGGGHGRGRTPGGVDK-RPICQVCFKRGHTAADCWYRYDEDYVPD 302

Query: 293 TYAQXXXXXXXXXXXXXXXXXXAMTATTHLQDNGDWFPDSGATNHVTPDLSNLTIQTPYN 114
                                 A  A      + +W+ D+GAT+HVT +L  LT++  YN
Sbjct: 303 A------------------KHVAAAAVNSYGVDTNWYIDTGATDHVTGELDKLTMKEKYN 344

Query: 113 GSEQVHVGDGNALPINHIGTSFFHPPSSSRI 21
           G EQ+H   G  + I+HIG +  H P+S  I
Sbjct: 345 GGEQIHTASGAGMDISHIGHAIVHNPNSRNI 375


>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
           gi|531389|gb|AAA57005.1| copia-like retrotransposon
           Hopscotch polyprotein [Zea mays]
          Length = 1439

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 52/156 (33%), Positives = 80/156 (51%)
 Frame = -2

Query: 476 KGGRTNFFPGGRGHYYQSQSHRGGRSQWNSNKPRSQCQLCGKLGHVAFNCWHRFEENFVP 297
           +GG  +F   GRG+ Y      G      S++PR  CQ+C ++GH A NCW+RF+EN+VP
Sbjct: 256 RGGFQSF---GRGNNYS-----GATDADTSSRPR--CQVCSRVGHTALNCWYRFDENYVP 305

Query: 296 HTYAQXXXXXXXXXXXXXXXXXXAMTATTHLQDNGDWFPDSGATNHVTPDLSNLTIQTPY 117
              +                     +A      N  W+ D+GAT+H+T DL  LT+   Y
Sbjct: 306 DQRSAN-------------------SAAHQNGSNVPWYTDTGATDHITGDLDRLTMHDKY 346

Query: 116 NGSEQVHVGDGNALPINHIGTSFFHPPSSSRILSLQ 9
            G++Q+   +G  + I++IG +    P+SSR L L+
Sbjct: 347 TGTDQIIAANGTGMTISNIGNAIV--PTSSRSLHLR 380


>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
          Length = 646

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 52/139 (37%), Positives = 71/139 (51%), Gaps = 2/139 (1%)
 Frame = -2

Query: 413 RGGRSQWNSNKP--RSQCQLCGKLGHVAFNCWHRFEENFVPHTYAQXXXXXXXXXXXXXX 240
           RGG S      P  R QCQ+C K+GHVA  CWHRF+  F P                   
Sbjct: 297 RGGHSNKGRANPGSRPQCQICCKIGHVATECWHRFDNQFQPKA-------SHSNQFSSSA 349

Query: 239 XXXXAMTATTHLQDNGDWFPDSGATNHVTPDLSNLTIQTPYNGSEQVHVGDGNALPINHI 60
               A+ A   L     WF D+GAT+HVT DL+NL++  P++G ++V VG+G  L + H 
Sbjct: 350 QDPQALMAAPGLLGETPWFLDTGATHHVTSDLANLSLHNPFSGDDKVIVGNGKGLYVLHT 409

Query: 59  GTSFFHPPSSSRILSLQHL 3
           G S    P+S   L L+++
Sbjct: 410 GHSSI--PTSQGALLLKNV 426


>gb|AAN04167.1| Putative copia-like retrotransposon polyprotein [Oryza sativa
           Japonica Group] gi|31431217|gb|AAP53032.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1042

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 48/143 (33%), Positives = 65/143 (45%), Gaps = 5/143 (3%)
 Frame = -2

Query: 446 GRGHYYQSQSHRG-----GRSQWNSNKPRSQCQLCGKLGHVAFNCWHRFEENFVPHTYAQ 282
           GRG    S   RG     G SQ   N  R  C +C K GHVA NCWHR++E++VP     
Sbjct: 147 GRGRNTNSNRGRGSGRGRGSSQQRGNDGRPLCHVCYKRGHVAANCWHRYDEDYVPDD--- 203

Query: 281 XXXXXXXXXXXXXXXXXXAMTATTHLQDNGDWFPDSGATNHVTPDLSNLTIQTPYNGSEQ 102
                                AT     + +W+ D+GAT+H+T  L  L  +  Y G +Q
Sbjct: 204 ----------------KLVAAATYSHGADSNWYVDTGATDHITSQLEKLNTREVYKGHDQ 247

Query: 101 VHVGDGNALPINHIGTSFFHPPS 33
           +H   G  + I HIG +  H P+
Sbjct: 248 IHTASGAGMKIKHIGHAIVHTPT 270


>emb|CAN83304.1| hypothetical protein VITISV_008191 [Vitis vinifera]
          Length = 515

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 59/162 (36%), Positives = 81/162 (50%), Gaps = 12/162 (7%)
 Frame = -2

Query: 452 PGGRGHYYQSQSHRGGRSQWNSNKPRS---QCQLCGKLGHVAFNCWHRFEENF-----VP 297
           P  R H  Q ++H    S  N     S   QCQLCGK GH    C+HRF+ N+     VP
Sbjct: 238 PPTRFHPQQPRNHHPIPSAHNKPHHLSTHPQCQLCGKFGHTVIKCYHRFDINYQGNNSVP 297

Query: 296 HTYAQXXXXXXXXXXXXXXXXXXAMTATTHLQDNGDWFPDSGATNHVTPDLSNLTIQTPY 117
              A                    + A  + QD+  WF D+GAT+H++  +  L+   PY
Sbjct: 298 PAQASFSHSM--------------LAAAPNHQDS--WFFDTGATHHLSHSVQTLSCVQPY 341

Query: 116 NGSEQVHVGDGNALPINHIGT-SFFHPP---SSSRILSLQHL 3
           +G+ QV +GDGN+LPI H GT SFF P    S +++L + HL
Sbjct: 342 SGTNQVTIGDGNSLPILHTGTKSFFFPSKTFSLNQVLHVPHL 383


>gb|ABA95065.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 825

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 51/148 (34%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
 Frame = -2

Query: 473 GGRTNFFPGGRGHYYQSQSHRGGRSQWNSNKPRSQ-CQLCGKLGHVAFNCWHRFEENFVP 297
           GG     P GRG        RGGR +    + R   CQ+C K GH A +CW+RF+E++V 
Sbjct: 233 GGGGRGAPRGRG----GGQIRGGRGRGTGGQDRRPTCQVCFKRGHTAADCWYRFDEDYVA 288

Query: 296 HTYAQXXXXXXXXXXXXXXXXXXAMTATTHLQDNGDWFPDSGATNHVTPDLSNLTIQTPY 117
                                    TAT     + +W+ D GAT+H+T +L  L+ +  Y
Sbjct: 289 DE-------------------KLVATATNSYGIDTNWYIDIGATDHITGELEKLSTKEKY 329

Query: 116 NGSEQVHVGDGNALPINHIGTSFFHPPS 33
           NGSEQ+H   G ++ I+HIG +  H PS
Sbjct: 330 NGSEQIHTASGASMDISHIGHTTVHTPS 357


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 51/136 (37%), Positives = 73/136 (53%)
 Frame = -2

Query: 410 GGRSQWNSNKPRSQCQLCGKLGHVAFNCWHRFEENFVPHTYAQXXXXXXXXXXXXXXXXX 231
           GGRSQ + ++P  QCQLCGK GH    C+HRF+ NF    Y                   
Sbjct: 309 GGRSQSSQHRP--QCQLCGKFGHTVVRCYHRFDINF--QGYNPNMDTVQTNKPNAKNQVQ 364

Query: 230 XAMTATTHLQDNGDWFPDSGATNHVTPDLSNLTIQTPYNGSEQVHVGDGNALPINHIGTS 51
             M + + + D   WF D+GAT+H++  +  L+   PY G+++V VG+G  L I H GT+
Sbjct: 365 AMMASPSTISDEA-WFFDTGATHHLSQSIDPLSDVQPYMGNDKVIVGNGKHLRILHTGTT 423

Query: 50  FFHPPSSSRILSLQHL 3
           FF  PSSS+   L+ +
Sbjct: 424 FF--PSSSKTFQLRQV 437


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1478

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 50/152 (32%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
 Frame = -2

Query: 473 GGRTNFFPGGRGHYYQSQSHRGGRSQWNSN-KPRSQCQLCGKLGHVAFNCWHRFEENFVP 297
           GG+     GG GH  ++     GR +       R  CQ+C K GH A +CW+R++E++VP
Sbjct: 358 GGQGGSRGGGGGHGRRNGGGVRGRGRTPGGVDKRPICQVCFKRGHTAADCWYRYDEDYVP 417

Query: 296 HTYAQXXXXXXXXXXXXXXXXXXAMTATTHLQDNGDWFPDSGATNHVTPDLSNLTIQTPY 117
                                  A  A      + +W+ D+GAT+HVT +L  LT++  Y
Sbjct: 418 DA------------------KHVAAAAVNSYGVDTNWYIDTGATDHVTGELDKLTMKEKY 459

Query: 116 NGSEQVHVGDGNALPINHIGTSFFHPPSSSRI 21
           NG EQ+H   G  + I+HIG +  H P+S  I
Sbjct: 460 NGGEQIHTASGAGMDISHIGHAIVHNPNSRNI 491