BLASTX nr result

ID: Cocculus22_contig00026048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00026048
         (549 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006440588.1| hypothetical protein CICLE_v10018833mg [Citr...    57   3e-06
ref|XP_007040173.1| DEA(D/H)-box RNA helicase family protein iso...    56   5e-06
ref|XP_007040172.1| DEA(D/H)-box RNA helicase family protein iso...    56   5e-06
ref|XP_007040171.1| DEA(D/H)-box RNA helicase family protein iso...    56   5e-06
ref|XP_007040170.1| DEA(D/H)-box RNA helicase family protein iso...    56   5e-06
ref|XP_004503757.1| PREDICTED: probable DEAD-box ATP-dependent R...    56   7e-06
ref|XP_006477444.1| PREDICTED: putative DEAD-box ATP-dependent R...    55   9e-06

>ref|XP_006440588.1| hypothetical protein CICLE_v10018833mg [Citrus clementina]
           gi|557542850|gb|ESR53828.1| hypothetical protein
           CICLE_v10018833mg [Citrus clementina]
          Length = 848

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
 Frame = +1

Query: 322 RFNFNEGGASEDDESDSRGGIGVK-------KKMMSRASLGNYDAKKIRRVP-KVFEDDS 477
           RF  NE  +S+DD       +  K       KKM S ASLG YD K  +RVP K  ED+ 
Sbjct: 283 RFKRNESSSSDDDSDIDSEDVDEKVEGWRDVKKMGSSASLGKYDMKITKRVPLKSLEDEH 342

Query: 478 NLSEQVQFIRDELNKRKSSGQEE 546
           +  EQV+ IR E++K K +G  E
Sbjct: 343 DFEEQVELIRKEISKNKLNGNGE 365


>ref|XP_007040173.1| DEA(D/H)-box RNA helicase family protein isoform 4, partial
           [Theobroma cacao] gi|508777418|gb|EOY24674.1|
           DEA(D/H)-box RNA helicase family protein isoform 4,
           partial [Theobroma cacao]
          Length = 689

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
 Frame = +1

Query: 322 RFNFNEGGASED-------DESDSRGGIGVKKKMMSRASLGNYDAKKIRRVP-KVFEDDS 477
           RF  NE  +S+D       DE +  GG    +K+ S ASLG YD K  +RVP K  E D 
Sbjct: 274 RFRRNESSSSDDEWDSDIDDEVEGVGGGRDVRKLGSSASLGKYDVKITKRVPLKELEKDI 333

Query: 478 NLSEQVQFIRDELNKRKSSGQEE 546
           + SEQV+ +R EL+K+K +  +E
Sbjct: 334 DFSEQVELLRKELDKKKLAENDE 356


>ref|XP_007040172.1| DEA(D/H)-box RNA helicase family protein isoform 3 [Theobroma
           cacao] gi|508777417|gb|EOY24673.1| DEA(D/H)-box RNA
           helicase family protein isoform 3 [Theobroma cacao]
          Length = 598

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
 Frame = +1

Query: 322 RFNFNEGGASED-------DESDSRGGIGVKKKMMSRASLGNYDAKKIRRVP-KVFEDDS 477
           RF  NE  +S+D       DE +  GG    +K+ S ASLG YD K  +RVP K  E D 
Sbjct: 274 RFRRNESSSSDDEWDSDIDDEVEGVGGGRDVRKLGSSASLGKYDVKITKRVPLKELEKDI 333

Query: 478 NLSEQVQFIRDELNKRKSSGQEE 546
           + SEQV+ +R EL+K+K +  +E
Sbjct: 334 DFSEQVELLRKELDKKKLAENDE 356


>ref|XP_007040171.1| DEA(D/H)-box RNA helicase family protein isoform 2 [Theobroma
           cacao] gi|508777416|gb|EOY24672.1| DEA(D/H)-box RNA
           helicase family protein isoform 2 [Theobroma cacao]
          Length = 719

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
 Frame = +1

Query: 322 RFNFNEGGASED-------DESDSRGGIGVKKKMMSRASLGNYDAKKIRRVP-KVFEDDS 477
           RF  NE  +S+D       DE +  GG    +K+ S ASLG YD K  +RVP K  E D 
Sbjct: 274 RFRRNESSSSDDEWDSDIDDEVEGVGGGRDVRKLGSSASLGKYDVKITKRVPLKELEKDI 333

Query: 478 NLSEQVQFIRDELNKRKSSGQEE 546
           + SEQV+ +R EL+K+K +  +E
Sbjct: 334 DFSEQVELLRKELDKKKLAENDE 356


>ref|XP_007040170.1| DEA(D/H)-box RNA helicase family protein isoform 1 [Theobroma
           cacao] gi|508777415|gb|EOY24671.1| DEA(D/H)-box RNA
           helicase family protein isoform 1 [Theobroma cacao]
          Length = 837

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
 Frame = +1

Query: 322 RFNFNEGGASED-------DESDSRGGIGVKKKMMSRASLGNYDAKKIRRVP-KVFEDDS 477
           RF  NE  +S+D       DE +  GG    +K+ S ASLG YD K  +RVP K  E D 
Sbjct: 274 RFRRNESSSSDDEWDSDIDDEVEGVGGGRDVRKLGSSASLGKYDVKITKRVPLKELEKDI 333

Query: 478 NLSEQVQFIRDELNKRKSSGQEE 546
           + SEQV+ +R EL+K+K +  +E
Sbjct: 334 DFSEQVELLRKELDKKKLAENDE 356


>ref|XP_004503757.1| PREDICTED: probable DEAD-box ATP-dependent RNA helicase 48-like
           [Cicer arietinum]
          Length = 762

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
 Frame = +1

Query: 334 NEGGASE---DDESDSRGGIGVKKKMMSRASLGNYDAKKIRRV-PKVFEDDSNLSEQVQF 501
           N G ++E   +DE +S+   G    M S ASLG YD K+ RRV PK + D+++ SEQV+ 
Sbjct: 207 NNGSSTESESEDEVESKNQ-GYYSNMGSIASLGKYDVKRERRVMPKPYNDETDFSEQVEL 265

Query: 502 IRDELNKRKSSGQEE 546
           I+ ELNK+K S  E+
Sbjct: 266 IKYELNKKKLSQNED 280


>ref|XP_006477444.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
           [Citrus sinensis]
          Length = 852

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 34/83 (40%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
 Frame = +1

Query: 322 RFNFNEGGASEDDESDSRGGIGVK-------KKMMSRASLGNYDAKKIRRVP-KVFEDDS 477
           RF  NE  +S+DD       +  K       +KM S ASLG YD K  +RVP K  ED+ 
Sbjct: 287 RFKRNESSSSDDDSDIHSEDVDEKVEGWRDVRKMGSSASLGKYDMKITKRVPLKSLEDEH 346

Query: 478 NLSEQVQFIRDELNKRKSSGQEE 546
           +  EQV+ IR E++K K +G  E
Sbjct: 347 DFEEQVELIRKEISKNKLNGNGE 369


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