BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00026027
         (303 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]          80   2e-13
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]          80   2e-13
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru...    80   2e-13
ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer ar...    78   1e-12
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar...    78   1e-12
ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer ar...    77   3e-12
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar...    76   6e-12
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]             72   8e-11
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]...    72   8e-11
ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, part...    71   1e-10
ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, part...    70   2e-10
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain...    70   2e-10
ref|XP_006405940.1| hypothetical protein EUTSA_v10028344mg [Eutr...    69   5e-10
ref|XP_006398030.1| hypothetical protein EUTSA_v10001272mg [Eutr...    68   2e-09
ref|XP_006408743.1| hypothetical protein EUTSA_v10002230mg [Eutr...    67   3e-09
ref|XP_006403079.1| hypothetical protein EUTSA_v10003477mg, part...    64   2e-08
ref|XP_006405665.1| hypothetical protein EUTSA_v10028343mg, part...    61   1e-07
ref|XP_006398074.1| hypothetical protein EUTSA_v10001103mg [Eutr...    61   1e-07
ref|XP_006376643.1| hypothetical protein POPTR_0012s01890g [Popu...    60   2e-07
ref|XP_002317407.1| hypothetical protein POPTR_0011s07150g [Popu...    60   3e-07

>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1701

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 40/91 (43%), Positives = 56/91 (61%)
 Frame = -2

Query: 284  FLGDQTPHEQRYRQEYFEMKCCTLDKKKLNKHYLGMLQLFYALKGIDDPNLKYTFIASFP 105
            FLGD     +  R++Y  MKCC+LD K L+ HY  M  LFY L G ++P LK+ F+AS P
Sbjct: 780  FLGDPAAAFEAARRDYLSMKCCSLDAKDLDFHYKRMSLLFYKLNGFNEPTLKHVFLASLP 839

Query: 104  YELQLHINKRVQDCGLSMTQIALGHIYQ*SK 12
             ELQ  I +++    L +  I+LG I+Q +K
Sbjct: 840  EELQPDIQRQLTASNLVIDNISLGKIFQLAK 870


>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1799

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 40/91 (43%), Positives = 56/91 (61%)
 Frame = -2

Query: 284  FLGDQTPHEQRYRQEYFEMKCCTLDKKKLNKHYLGMLQLFYALKGIDDPNLKYTFIASFP 105
            FLGD     +  R++Y  MKCC+LD K L+ HY  M  LFY L G ++P LK+ F+AS P
Sbjct: 878  FLGDPAAAFEAARRDYLSMKCCSLDAKDLDFHYKRMSLLFYKLNGFNEPTLKHVFLASLP 937

Query: 104  YELQLHINKRVQDCGLSMTQIALGHIYQ*SK 12
             ELQ  I +++    L +  I+LG I+Q +K
Sbjct: 938  EELQPDIQRQLTASNLVIDNISLGKIFQLAK 968


>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
            gi|565672276|gb|AHC13194.1| polyprotein [Citrus
            endogenous pararetrovirus]
          Length = 1812

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 40/91 (43%), Positives = 56/91 (61%)
 Frame = -2

Query: 284  FLGDQTPHEQRYRQEYFEMKCCTLDKKKLNKHYLGMLQLFYALKGIDDPNLKYTFIASFP 105
            FLGD     +  R++Y  MKCC+LD K L+ HY  M  LFY L G ++P LK+ F+AS P
Sbjct: 891  FLGDPAAAFEAARRDYLSMKCCSLDAKDLDFHYKRMSLLFYKLNGFNEPTLKHVFLASLP 950

Query: 104  YELQLHINKRVQDCGLSMTQIALGHIYQ*SK 12
             ELQ  I +++    L +  I+LG I+Q +K
Sbjct: 951  EELQPDIQRQLTASNLVIDNISLGKIFQLAK 981


>ref|XP_004500104.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1170

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 35/88 (39%), Positives = 56/88 (63%)
 Frame = -2

Query: 284 FLGDQTPHEQRYRQEYFEMKCCTLDKKKLNKHYLGMLQLFYALKGIDDPNLKYTFIASFP 105
           F+GD    +++ RQE++EM+CC+L  K L +HY  M Q +Y L G +D +LK T+I+S P
Sbjct: 331 FIGDMEIFDRKNRQEFYEMRCCSLKVKDLERHYQRMTQRYYVLNGFNDHSLKNTYISSLP 390

Query: 104 YELQLHINKRVQDCGLSMTQIALGHIYQ 21
            ELQ  I++ +      +  ++LG I+Q
Sbjct: 391 QELQPEIHRMITATQKDIKALSLGQIHQ 418


>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1645

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 36/88 (40%), Positives = 54/88 (61%)
 Frame = -2

Query: 284  FLGDQTPHEQRYRQEYFEMKCCTLDKKKLNKHYLGMLQLFYALKGIDDPNLKYTFIASFP 105
            F+GD    +++ RQE+FEM+CC+L  K L +HY  M Q +Y L G +D  LK T I+S P
Sbjct: 871  FIGDMEIFDRKIRQEFFEMRCCSLKVKDLQRHYQRMTQRYYVLNGFNDHTLKNTHISSLP 930

Query: 104  YELQLHINKRVQDCGLSMTQIALGHIYQ 21
             ELQ  I++ +      +  ++LG I+Q
Sbjct: 931  QELQPEIHRMIAAAQKDVKTLSLGQIHQ 958


>ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 894

 Score = 77.0 bits (188), Expect = 3e-12
 Identities = 35/88 (39%), Positives = 54/88 (61%)
 Frame = -2

Query: 284 FLGDQTPHEQRYRQEYFEMKCCTLDKKKLNKHYLGMLQLFYALKGIDDPNLKYTFIASFP 105
           F+GD    +++ RQE+FEM+CC+L  K L +HY  M Q +Y L G +D  LK  +I+S P
Sbjct: 54  FIGDMEIFDRKNRQEFFEMRCCSLKDKDLERHYQRMTQRYYVLNGFNDHTLKNIYISSLP 113

Query: 104 YELQLHINKRVQDCGLSMTQIALGHIYQ 21
            ELQ  I++ +      +  ++LG I+Q
Sbjct: 114 QELQPEIHRMIAAAQKDVKTLSLGQIHQ 141


>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
          Length = 1951

 Score = 75.9 bits (185), Expect = 6e-12
 Identities = 35/88 (39%), Positives = 54/88 (61%)
 Frame = -2

Query: 284  FLGDQTPHEQRYRQEYFEMKCCTLDKKKLNKHYLGMLQLFYALKGIDDPNLKYTFIASFP 105
            F+GD    +++ RQE+FEM+CC+L  K L +HY  M Q +Y L G +D  LK  +I+S P
Sbjct: 891  FIGDMEIFDRKNRQEFFEMRCCSLKVKDLERHYQRMTQRYYVLNGFNDHTLKNIYISSLP 950

Query: 104  YELQLHINKRVQDCGLSMTQIALGHIYQ 21
             ELQ  I++ +      +  ++LG I+Q
Sbjct: 951  QELQPEIHRMIAAARKDVKILSLGQIHQ 978


>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
          Length = 1886

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 35/89 (39%), Positives = 60/89 (67%)
 Frame = -2

Query: 287  WFLGDQTPHEQRYRQEYFEMKCCTLDKKKLNKHYLGMLQLFYALKGIDDPNLKYTFIASF 108
            +F GDQ+ +++  R++ FEMKC + D+KK+++H+  M++LFY + G  D +LK  FI+S 
Sbjct: 933  YFCGDQSQNKEELRRQIFEMKCLSYDRKKIDRHFQRMIKLFYHIGG--DISLKQAFISSL 990

Query: 107  PYELQLHINKRVQDCGLSMTQIALGHIYQ 21
            P  L   I+  +++ G S+TQ+ +G I Q
Sbjct: 991  PPILSERISALIKERGTSVTQMHVGDIRQ 1019


>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
            gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
            polyprotein; Contains: RecName: Full=Movement protein;
            Short=MP; Contains: RecName: Full=Capsid protein;
            Short=CP; Contains: RecName: Full=Aspartic protease;
            Short=PR; Contains: RecName: Full=Reverse transcriptase;
            Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
            [petunia vein clearing virus]
          Length = 2179

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 35/89 (39%), Positives = 60/89 (67%)
 Frame = -2

Query: 287  WFLGDQTPHEQRYRQEYFEMKCCTLDKKKLNKHYLGMLQLFYALKGIDDPNLKYTFIASF 108
            +F GDQ+ +++  R++ FEMKC + D+KK+++H+  M++LFY + G  D +LK  FI+S 
Sbjct: 932  YFCGDQSQNKEELRRQIFEMKCLSYDRKKIDRHFQRMIKLFYHIGG--DISLKQAFISSL 989

Query: 107  PYELQLHINKRVQDCGLSMTQIALGHIYQ 21
            P  L   I+  +++ G S+TQ+ +G I Q
Sbjct: 990  PPILSERISALIKERGTSVTQMHVGDIRQ 1018


>ref|XP_006409622.1| hypothetical protein EUTSA_v10023188mg, partial [Eutrema
           salsugineum] gi|557110784|gb|ESQ51075.1| hypothetical
           protein EUTSA_v10023188mg, partial [Eutrema salsugineum]
          Length = 1101

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 35/88 (39%), Positives = 52/88 (59%)
 Frame = -2

Query: 284 FLGDQTPHEQRYRQEYFEMKCCTLDKKKLNKHYLGMLQLFYALKGIDDPNLKYTFIASFP 105
           FLG    +  + R+EY  M+CC+  +K L KHY  M + FYAL GIDD NLK  ++ S P
Sbjct: 401 FLGTWDHYTIQAREEYMSMRCCSFKRKDLEKHYERMSKRFYALNGIDDVNLKQAYLNSLP 460

Query: 104 YELQLHINKRVQDCGLSMTQIALGHIYQ 21
             L    ++ +    ++++Q +LG IYQ
Sbjct: 461 EPLGNETSRILSLKNMTLSQASLGEIYQ 488


>ref|XP_006393720.1| hypothetical protein EUTSA_v10012231mg, partial [Eutrema salsugineum]
            gi|557090298|gb|ESQ31006.1| hypothetical protein
            EUTSA_v10012231mg, partial [Eutrema salsugineum]
          Length = 1904

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 34/88 (38%), Positives = 52/88 (59%)
 Frame = -2

Query: 284  FLGDQTPHEQRYRQEYFEMKCCTLDKKKLNKHYLGMLQLFYALKGIDDPNLKYTFIASFP 105
            F G    +  + R+EY  M+CC+  +K L KHY  M + FYAL GIDD NLK T++ S P
Sbjct: 772  FFGTWDHYTIQAREEYMSMRCCSFKRKDLEKHYERMSKRFYALNGIDDVNLKQTYLKSLP 831

Query: 104  YELQLHINKRVQDCGLSMTQIALGHIYQ 21
              L    ++ +    ++++Q +LG IY+
Sbjct: 832  EPLGNETSRILSLKNMTLSQASLGEIYK 859


>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
            protein; Short=MP; Contains: RecName: Full=Capsid
            protein; Short=CP; Contains: RecName: Full=Aspartic
            protease; Short=PR; Contains: RecName: Full=Reverse
            transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
            polyprotein 1 [Petunia vein clearing virus]
          Length = 2180

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 35/89 (39%), Positives = 59/89 (66%)
 Frame = -2

Query: 287  WFLGDQTPHEQRYRQEYFEMKCCTLDKKKLNKHYLGMLQLFYALKGIDDPNLKYTFIASF 108
            +F GDQ+ +++  R++ FEMKC + D+KK+++H+  M++LFY + G  D +LK  FI+S 
Sbjct: 933  YFCGDQSQNKEELRRQIFEMKCLSYDRKKIDRHFQRMIKLFYHIGG--DISLKQAFISSL 990

Query: 107  PYELQLHINKRVQDCGLSMTQIALGHIYQ 21
            P  L   I+  +++ G S TQ+ +G I Q
Sbjct: 991  PPILSERISALIKERGTSGTQMHVGDIRQ 1019


>ref|XP_006405940.1| hypothetical protein EUTSA_v10028344mg [Eutrema salsugineum]
           gi|557107078|gb|ESQ47393.1| hypothetical protein
           EUTSA_v10028344mg [Eutrema salsugineum]
          Length = 1508

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 34/88 (38%), Positives = 51/88 (57%)
 Frame = -2

Query: 284 FLGDQTPHEQRYRQEYFEMKCCTLDKKKLNKHYLGMLQLFYALKGIDDPNLKYTFIASFP 105
           FLG    +  + R+EY  M+CC+  +K L KHY  M + FY L GIDD NLK  ++ S P
Sbjct: 377 FLGTWDHYTIQAREEYMSMRCCSFKRKDLEKHYERMSKRFYVLNGIDDVNLKQAYLNSLP 436

Query: 104 YELQLHINKRVQDCGLSMTQIALGHIYQ 21
             L    ++ +    ++++Q +LG IYQ
Sbjct: 437 EPLGNETSQILSLKNMTLSQASLGEIYQ 464


>ref|XP_006398030.1| hypothetical protein EUTSA_v10001272mg [Eutrema salsugineum]
           gi|557099112|gb|ESQ39483.1| hypothetical protein
           EUTSA_v10001272mg [Eutrema salsugineum]
          Length = 828

 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 31/76 (40%), Positives = 47/76 (61%)
 Frame = -2

Query: 248 RQEYFEMKCCTLDKKKLNKHYLGMLQLFYALKGIDDPNLKYTFIASFPYELQLHINKRVQ 69
           R+EY  M+CC+  +K L KHY  M + FYAL GIDD N+K  ++ S P  L    ++ + 
Sbjct: 420 REEYMSMRCCSFKRKDLEKHYERMSKRFYALNGIDDVNMKQAYLNSLPEPLGNETSRILS 479

Query: 68  DCGLSMTQIALGHIYQ 21
              ++++Q +LG IYQ
Sbjct: 480 LKNMTLSQASLGEIYQ 495


>ref|XP_006408743.1| hypothetical protein EUTSA_v10002230mg [Eutrema salsugineum]
           gi|557109899|gb|ESQ50196.1| hypothetical protein
           EUTSA_v10002230mg [Eutrema salsugineum]
          Length = 469

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 32/76 (42%), Positives = 46/76 (60%)
 Frame = -2

Query: 248 RQEYFEMKCCTLDKKKLNKHYLGMLQLFYALKGIDDPNLKYTFIASFPYELQLHINKRVQ 69
           R+EY  M+CC+  KK L KHY  M + FYAL GID+ NLK  ++ S P  L    ++ + 
Sbjct: 66  REEYMSMRCCSFKKKDLEKHYERMSKRFYALNGIDNVNLKQAYLNSLPEPLGNKTSRILS 125

Query: 68  DCGLSMTQIALGHIYQ 21
              +++ Q +LG IYQ
Sbjct: 126 LKNMTLNQASLGEIYQ 141


>ref|XP_006403079.1| hypothetical protein EUTSA_v10003477mg, partial [Eutrema
           salsugineum] gi|557104186|gb|ESQ44532.1| hypothetical
           protein EUTSA_v10003477mg, partial [Eutrema salsugineum]
          Length = 751

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 32/88 (36%), Positives = 49/88 (55%)
 Frame = -2

Query: 284 FLGDQTPHEQRYRQEYFEMKCCTLDKKKLNKHYLGMLQLFYALKGIDDPNLKYTFIASFP 105
           FLG    +  + R+EY  M+CC+  +K L KHY  M +  YAL GIDD N K  ++   P
Sbjct: 546 FLGMWDHYTIQAREEYMSMRCCSFKRKDLEKHYERMSKRLYALNGIDDVNHKQAYLNQLP 605

Query: 104 YELQLHINKRVQDCGLSMTQIALGHIYQ 21
             L    ++ +    ++++Q +LG IYQ
Sbjct: 606 EPLGNETSRILSLKNMTLSQASLGEIYQ 633


>ref|XP_006405665.1| hypothetical protein EUTSA_v10028343mg, partial [Eutrema
           salsugineum] gi|557106803|gb|ESQ47118.1| hypothetical
           protein EUTSA_v10028343mg, partial [Eutrema salsugineum]
          Length = 1104

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/88 (31%), Positives = 52/88 (59%)
 Frame = -2

Query: 284 FLGDQTPHEQRYRQEYFEMKCCTLDKKKLNKHYLGMLQLFYALKGIDDPNLKYTFIASFP 105
           F+G  T  +++ ++E+F  KCC+L K+ L KH+    + +YAL G+++P+LK   ++S  
Sbjct: 362 FIGTPTHLKEQLQEEFFTAKCCSLKKRDLAKHFERQTRRYYALNGLNNPSLKKVHLSSID 421

Query: 104 YELQLHINKRVQDCGLSMTQIALGHIYQ 21
             L       ++D G ++  I++G I Q
Sbjct: 422 DYLSQQTKLYIRDQGQTVEDISIGQIQQ 449


>ref|XP_006398074.1| hypothetical protein EUTSA_v10001103mg [Eutrema salsugineum]
            gi|557099163|gb|ESQ39527.1| hypothetical protein
            EUTSA_v10001103mg [Eutrema salsugineum]
          Length = 1135

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/88 (31%), Positives = 52/88 (59%)
 Frame = -2

Query: 284  FLGDQTPHEQRYRQEYFEMKCCTLDKKKLNKHYLGMLQLFYALKGIDDPNLKYTFIASFP 105
            F+G  T  +++ ++E+F  KCC+L K+ L KH+    + +YAL G+++P+LK   ++S  
Sbjct: 868  FIGTPTHLKEQLQEEFFTAKCCSLKKRDLAKHFERQTRRYYALNGLNNPSLKQVHLSSLD 927

Query: 104  YELQLHINKRVQDCGLSMTQIALGHIYQ 21
              L       ++D G ++  I++G I Q
Sbjct: 928  DYLSQQTKLYIRDQGETVEDISIGQIQQ 955


>ref|XP_006376643.1| hypothetical protein POPTR_0012s01890g [Populus trichocarpa]
           gi|550326181|gb|ERP54440.1| hypothetical protein
           POPTR_0012s01890g [Populus trichocarpa]
          Length = 1153

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 27/63 (42%), Positives = 41/63 (65%)
 Frame = -2

Query: 284 FLGDQTPHEQRYRQEYFEMKCCTLDKKKLNKHYLGMLQLFYALKGIDDPNLKYTFIASFP 105
           FLG+    ++  R EYF+MKCC+  +  L +H+  M Q ++ L G DDP+LK+ F+AS P
Sbjct: 445 FLGEALNDKEIARYEYFKMKCCSYLRSDLERHFKEMCQRYHILFGPDDPSLKHAFLASIP 504

Query: 104 YEL 96
            +L
Sbjct: 505 RDL 507


>ref|XP_002317407.1| hypothetical protein POPTR_0011s07150g [Populus trichocarpa]
           gi|222860472|gb|EEE98019.1| hypothetical protein
           POPTR_0011s07150g [Populus trichocarpa]
          Length = 950

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 26/63 (41%), Positives = 41/63 (65%)
 Frame = -2

Query: 284 FLGDQTPHEQRYRQEYFEMKCCTLDKKKLNKHYLGMLQLFYALKGIDDPNLKYTFIASFP 105
           FLG+    ++  R EYF+MKCC+  +  L +H+  M + ++ L G DDP+LK+ F+AS P
Sbjct: 754 FLGEALNDKEIARYEYFKMKCCSYLRSDLERHFKKMCRRYHILSGPDDPSLKHAFLASIP 813

Query: 104 YEL 96
            +L
Sbjct: 814 RDL 816