BLASTX nr result
ID: Cocculus22_contig00026017
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00026017
(300 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004490917.1| PREDICTED: genome polyprotein-like [Cicer ar... 134 1e-29
ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer ar... 133 2e-29
ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer ar... 133 3e-29
ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer ar... 130 1e-28
ref|XP_004488974.1| PREDICTED: genome polyprotein-like [Cicer ar... 125 8e-27
ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer ar... 123 3e-26
ref|XP_004499473.1| PREDICTED: genome polyprotein-like [Cicer ar... 120 2e-25
ref|XP_004500032.1| PREDICTED: genome polyprotein-like [Cicer ar... 120 3e-25
gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus] 114 1e-23
sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contain... 114 1e-23
ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]... 114 1e-23
ref|XP_004509900.1| PREDICTED: genome polyprotein-like [Cicer ar... 111 9e-23
ref|XP_004509642.1| PREDICTED: genome polyprotein-like [Cicer ar... 109 3e-22
gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus] 107 1e-21
gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus] 107 1e-21
ref|YP_008992013.1| polyprotein [Citrus endogenous pararetroviru... 107 1e-21
ref|XP_006419165.1| hypothetical protein EUTSA_v100029341mg, par... 104 1e-20
ref|XP_006403349.1| hypothetical protein EUTSA_v10003417mg, part... 103 2e-20
ref|XP_006405665.1| hypothetical protein EUTSA_v10028343mg, part... 103 3e-20
gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein... 102 7e-20
>ref|XP_004490917.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 279
Score = 134 bits (337), Expect = 1e-29
Identities = 63/99 (63%), Positives = 75/99 (75%)
Frame = +1
Query: 4 QLVKQFLDITDQYGIMLSSKKSILVQQNIEFLGLQFSNGVYRP*PHIAAELSNFPDENLT 183
QL+ QF I +GIMLS KKS + Q NI+FLG+ FS G Y+P PHIA EL NFPDENLT
Sbjct: 77 QLLGQFTQIAQGHGIMLSEKKSQIAQTNIDFLGMHFSQGKYQPQPHIAQELLNFPDENLT 136
Query: 184 VKQVQLFLGIVNFLRQFLPKAAPYVHSLAQLLKKQPPPW 300
VKQ+Q FLGI+N++R F+PK A Y L+QLLKK PPPW
Sbjct: 137 VKQIQQFLGIINYIRNFIPKLAKYTSPLSQLLKKNPPPW 175
>ref|XP_004497811.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1951
Score = 133 bits (335), Expect = 2e-29
Identities = 62/99 (62%), Positives = 75/99 (75%)
Frame = +1
Query: 4 QLVKQFLDITDQYGIMLSSKKSILVQQNIEFLGLQFSNGVYRP*PHIAAELSNFPDENLT 183
QL+ QF+ I +GIMLS KKS + Q I+FLG+ FS G Y+P PHIA EL NFPDENLT
Sbjct: 1511 QLLGQFVQIAQNHGIMLSEKKSQIAQTEIDFLGMHFSQGKYQPQPHIAQELLNFPDENLT 1570
Query: 184 VKQVQLFLGIVNFLRQFLPKAAPYVHSLAQLLKKQPPPW 300
VKQ+Q FLGI+N++R F+PK A Y L+QLLKK PPPW
Sbjct: 1571 VKQIQQFLGIINYIRDFIPKLAKYTSPLSQLLKKNPPPW 1609
>ref|XP_004491299.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 894
Score = 133 bits (334), Expect = 3e-29
Identities = 62/99 (62%), Positives = 75/99 (75%)
Frame = +1
Query: 4 QLVKQFLDITDQYGIMLSSKKSILVQQNIEFLGLQFSNGVYRP*PHIAAELSNFPDENLT 183
QL+ QF+ I +GIMLS KKS + Q I+FLG+ FS G Y+P PHIA EL NFPDENLT
Sbjct: 721 QLLGQFVQIAQNHGIMLSEKKSQIAQTEIDFLGMHFSQGKYQPQPHIAQELLNFPDENLT 780
Query: 184 VKQVQLFLGIVNFLRQFLPKAAPYVHSLAQLLKKQPPPW 300
VKQ+Q FLGI+N++R F+PK A Y L+QLLKK PPPW
Sbjct: 781 VKQIQQFLGIINYIRNFIPKLARYTSPLSQLLKKNPPPW 819
>ref|XP_004499727.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 1645
Score = 130 bits (328), Expect = 1e-28
Identities = 61/99 (61%), Positives = 74/99 (74%)
Frame = +1
Query: 4 QLVKQFLDITDQYGIMLSSKKSILVQQNIEFLGLQFSNGVYRP*PHIAAELSNFPDENLT 183
QL+ QF I +GIMLS KKS + Q I+FLG+ FS G Y+P PHIA EL NFPDENLT
Sbjct: 1456 QLLGQFSQIAQDHGIMLSEKKSQITQTEIDFLGMHFSQGKYQPHPHIAQELLNFPDENLT 1515
Query: 184 VKQVQLFLGIVNFLRQFLPKAAPYVHSLAQLLKKQPPPW 300
VKQ+Q FLGI+N++R F+PK A Y L+QLL+K PPPW
Sbjct: 1516 VKQIQQFLGIINYIRNFIPKLARYTSPLSQLLRKNPPPW 1554
>ref|XP_004488974.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 260
Score = 125 bits (313), Expect = 8e-27
Identities = 60/99 (60%), Positives = 72/99 (72%)
Frame = +1
Query: 4 QLVKQFLDITDQYGIMLSSKKSILVQQNIEFLGLQFSNGVYRP*PHIAAELSNFPDENLT 183
QL+ QF I +GIMLS KKS + Q I+FLG+ FS G Y+P PHIA EL NF DENLT
Sbjct: 147 QLLGQFSQIAQDHGIMLSEKKSQIAQTEIDFLGMHFSQGKYQPQPHIAQELLNFSDENLT 206
Query: 184 VKQVQLFLGIVNFLRQFLPKAAPYVHSLAQLLKKQPPPW 300
VKQ+Q FLGIVN++ F+PK A Y L+QLL+K PPPW
Sbjct: 207 VKQIQQFLGIVNYIWNFIPKLARYTSPLSQLLRKNPPPW 245
>ref|XP_004511185.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 803
Score = 123 bits (308), Expect = 3e-26
Identities = 59/99 (59%), Positives = 72/99 (72%)
Frame = +1
Query: 4 QLVKQFLDITDQYGIMLSSKKSILVQQNIEFLGLQFSNGVYRP*PHIAAELSNFPDENLT 183
QL+ QF I ++GIMLS KKS + Q I+FLG+ FS G Y+ PHIA EL NFPDENLT
Sbjct: 587 QLLGQFSQIAQEHGIMLSEKKSQIAQTEIDFLGMHFSQGKYQHQPHIAQELLNFPDENLT 646
Query: 184 VKQVQLFLGIVNFLRQFLPKAAPYVHSLAQLLKKQPPPW 300
VKQ+Q FLGI+N++R F+PK A Y L+QLLKK PW
Sbjct: 647 VKQIQQFLGIINYIRNFIPKLARYTSPLSQLLKKNSSPW 685
>ref|XP_004499473.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 441
Score = 120 bits (301), Expect = 2e-25
Identities = 56/99 (56%), Positives = 71/99 (71%)
Frame = +1
Query: 4 QLVKQFLDITDQYGIMLSSKKSILVQQNIEFLGLQFSNGVYRP*PHIAAELSNFPDENLT 183
QL+ QF + YG+MLS KKS L Q I+FLG+ FS G Y+P PHIA EL NF DENLT
Sbjct: 258 QLLGQFSHVAQNYGMMLSKKKSQLAQTEIDFLGMHFSQGKYQPQPHIAQELLNFLDENLT 317
Query: 184 VKQVQLFLGIVNFLRQFLPKAAPYVHSLAQLLKKQPPPW 300
+KQ+Q FLGI+N+++ F+PK A Y L+ LL+K PPW
Sbjct: 318 IKQIQQFLGIINYIKNFIPKLAKYTSPLSLLLRKNHPPW 356
>ref|XP_004500032.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 313
Score = 120 bits (300), Expect = 3e-25
Identities = 56/100 (56%), Positives = 72/100 (72%)
Frame = +1
Query: 1 LQLVKQFLDITDQYGIMLSSKKSILVQQNIEFLGLQFSNGVYRP*PHIAAELSNFPDENL 180
L+L+ QF I +GIM S KKS + Q I+FLG+ FS Y+P PHIA EL NFPDENL
Sbjct: 81 LKLLGQFSQIAQDHGIMFSEKKSQIAQTKIDFLGMHFSQRKYQPQPHIAQELLNFPDENL 140
Query: 181 TVKQVQLFLGIVNFLRQFLPKAAPYVHSLAQLLKKQPPPW 300
TVK++Q FLGI+N+++ F+PK A Y L+QLL+K PPW
Sbjct: 141 TVKKIQQFLGIINYIQNFIPKLARYTSPLSQLLRKNSPPW 180
>gb|AAO67369.1| polyprotein 1 [Petunia vein clearing virus]
Length = 1886
Score = 114 bits (286), Expect = 1e-23
Identities = 48/100 (48%), Positives = 74/100 (74%)
Frame = +1
Query: 1 LQLVKQFLDITDQYGIMLSSKKSILVQQNIEFLGLQFSNGVYRP*PHIAAELSNFPDENL 180
++L+ QF+ + ++G+MLS+KK IL Q I+FLG+ F++G + P HI+ EL FPD NL
Sbjct: 1556 IKLLNQFISLVKKFGVMLSAKKMILAQNKIQFLGMDFADGTFSPAGHISLELQKFPDTNL 1615
Query: 181 TVKQVQLFLGIVNFLRQFLPKAAPYVHSLAQLLKKQPPPW 300
+VKQ+Q FLGIVN++R F+P+ ++ L+ +LKK+PP W
Sbjct: 1616 SVKQIQQFLGIVNYIRDFIPEVTEHISPLSDMLKKKPPAW 1655
>sp|Q6XKE6.1|POLG_PVCV2 RecName: Full=Genome polyprotein; Contains: RecName: Full=Movement
protein; Short=MP; Contains: RecName: Full=Capsid
protein; Short=CP; Contains: RecName: Full=Aspartic
protease; Short=PR; Contains: RecName: Full=Reverse
transcriptase; Short=RT gi|34328896|gb|AAO67368.1|
polyprotein 1 [Petunia vein clearing virus]
Length = 2180
Score = 114 bits (286), Expect = 1e-23
Identities = 48/100 (48%), Positives = 74/100 (74%)
Frame = +1
Query: 1 LQLVKQFLDITDQYGIMLSSKKSILVQQNIEFLGLQFSNGVYRP*PHIAAELSNFPDENL 180
++L+ QF+ + ++G+MLS+KK IL Q I+FLG+ F++G + P HI+ EL FPD NL
Sbjct: 1556 IKLLNQFISLVKKFGVMLSAKKMILAQNKIQFLGMDFADGTFSPAGHISLELQKFPDTNL 1615
Query: 181 TVKQVQLFLGIVNFLRQFLPKAAPYVHSLAQLLKKQPPPW 300
+VKQ+Q FLGIVN++R F+P+ ++ L+ +LKK+PP W
Sbjct: 1616 SVKQIQQFLGIVNYIRDFIPEVTEHISPLSDMLKKKPPAW 1655
>ref|NP_127504.1| ORF I polyprotein [Petunia vein clearing virus]
gi|82061579|sp|Q91DM0.1|POLG_PVCV1 RecName: Full=Genome
polyprotein; Contains: RecName: Full=Movement protein;
Short=MP; Contains: RecName: Full=Capsid protein;
Short=CP; Contains: RecName: Full=Aspartic protease;
Short=PR; Contains: RecName: Full=Reverse transcriptase;
Short=RT gi|14574598|gb|AAK68664.1| ORF I polyprotein
[petunia vein clearing virus]
Length = 2179
Score = 114 bits (286), Expect = 1e-23
Identities = 48/100 (48%), Positives = 74/100 (74%)
Frame = +1
Query: 1 LQLVKQFLDITDQYGIMLSSKKSILVQQNIEFLGLQFSNGVYRP*PHIAAELSNFPDENL 180
++L+ QF+ + ++G+MLS+KK IL Q I+FLG+ F++G + P HI+ EL FPD NL
Sbjct: 1555 IKLLNQFISLVKKFGVMLSAKKMILAQNKIQFLGMDFADGTFSPAGHISLELQKFPDTNL 1614
Query: 181 TVKQVQLFLGIVNFLRQFLPKAAPYVHSLAQLLKKQPPPW 300
+VKQ+Q FLGIVN++R F+P+ ++ L+ +LKK+PP W
Sbjct: 1615 SVKQIQQFLGIVNYIRDFIPEVTEHISPLSDMLKKKPPAW 1654
>ref|XP_004509900.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 181
Score = 111 bits (278), Expect = 9e-23
Identities = 51/84 (60%), Positives = 62/84 (73%)
Frame = +1
Query: 49 MLSSKKSILVQQNIEFLGLQFSNGVYRP*PHIAAELSNFPDENLTVKQVQLFLGIVNFLR 228
MLS KK L Q I+FLG+ FS G ++P PHIA EL NFPDENLT+KQ+Q FLGI+N++R
Sbjct: 1 MLSKKKRQLAQTKIDFLGIHFSQGKFQPQPHIAQELLNFPDENLTIKQIQQFLGIINYIR 60
Query: 229 QFLPKAAPYVHSLAQLLKKQPPPW 300
F+PK A Y L+QLL K P PW
Sbjct: 61 NFIPKLAKYTSPLSQLLSKNPSPW 84
>ref|XP_004509642.1| PREDICTED: genome polyprotein-like [Cicer arietinum]
Length = 168
Score = 109 bits (273), Expect = 3e-22
Identities = 50/84 (59%), Positives = 63/84 (75%)
Frame = +1
Query: 49 MLSSKKSILVQQNIEFLGLQFSNGVYRP*PHIAAELSNFPDENLTVKQVQLFLGIVNFLR 228
ML KKS + Q I+FLG+ FS G Y+P PH+A EL NF DENLTVKQ+Q FLGI+N++R
Sbjct: 1 MLFEKKSHIAQIEIDFLGMHFSQGKYQPQPHVAKELLNFLDENLTVKQIQQFLGIINYIR 60
Query: 229 QFLPKAAPYVHSLAQLLKKQPPPW 300
F+P+ A Y L+QLL+K PPPW
Sbjct: 61 NFIPRLARYTSPLSQLLRKNPPPW 84
>gb|AHC13200.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1701
Score = 107 bits (268), Expect = 1e-21
Identities = 50/99 (50%), Positives = 68/99 (68%)
Frame = +1
Query: 4 QLVKQFLDITDQYGIMLSSKKSILVQQNIEFLGLQFSNGVYRP*PHIAAELSNFPDENLT 183
+L+ QF DI +GIMLS+KKS + IEFLG+ +G Y+P H+A EL +FPD+ L+
Sbjct: 1399 RLLNQFYDIVHSHGIMLSAKKSTIATDTIEFLGMIIKDGHYQPGKHVAQELLHFPDQQLS 1458
Query: 184 VKQVQLFLGIVNFLRQFLPKAAPYVHSLAQLLKKQPPPW 300
KQVQ FLGI+N++R F+P Y L+ LLKK+PP W
Sbjct: 1459 KKQVQQFLGIINYIRDFIPHVDHYTRHLSALLKKKPPEW 1497
>gb|AHC13197.1| polyprotein [Citrus endogenous pararetrovirus]
Length = 1799
Score = 107 bits (268), Expect = 1e-21
Identities = 50/99 (50%), Positives = 68/99 (68%)
Frame = +1
Query: 4 QLVKQFLDITDQYGIMLSSKKSILVQQNIEFLGLQFSNGVYRP*PHIAAELSNFPDENLT 183
+L+ QF DI +GIMLS+KKS + IEFLG+ +G Y+P H+A EL +FPD+ L+
Sbjct: 1497 RLLNQFYDIVHSHGIMLSAKKSTIATDTIEFLGMIIKDGHYQPGKHVAQELLHFPDQQLS 1556
Query: 184 VKQVQLFLGIVNFLRQFLPKAAPYVHSLAQLLKKQPPPW 300
KQVQ FLGI+N++R F+P Y L+ LLKK+PP W
Sbjct: 1557 KKQVQQFLGIINYIRDFIPHVDHYTRHLSALLKKKPPEW 1595
>ref|YP_008992013.1| polyprotein [Citrus endogenous pararetrovirus]
gi|565672276|gb|AHC13194.1| polyprotein [Citrus
endogenous pararetrovirus]
Length = 1812
Score = 107 bits (268), Expect = 1e-21
Identities = 50/99 (50%), Positives = 68/99 (68%)
Frame = +1
Query: 4 QLVKQFLDITDQYGIMLSSKKSILVQQNIEFLGLQFSNGVYRP*PHIAAELSNFPDENLT 183
+L+ QF DI +GIMLS+KKS + IEFLG+ +G Y+P H+A EL +FPD+ L+
Sbjct: 1510 RLLNQFYDIVHSHGIMLSAKKSTIATDTIEFLGMIIKDGHYQPGKHVAQELLHFPDQQLS 1569
Query: 184 VKQVQLFLGIVNFLRQFLPKAAPYVHSLAQLLKKQPPPW 300
KQVQ FLGI+N++R F+P Y L+ LLKK+PP W
Sbjct: 1570 KKQVQQFLGIINYIRDFIPHVDHYTRHLSALLKKKPPEW 1608
>ref|XP_006419165.1| hypothetical protein EUTSA_v100029341mg, partial [Eutrema
salsugineum] gi|557097093|gb|ESQ37601.1| hypothetical
protein EUTSA_v100029341mg, partial [Eutrema
salsugineum]
Length = 735
Score = 104 bits (259), Expect = 1e-20
Identities = 45/100 (45%), Positives = 70/100 (70%)
Frame = +1
Query: 1 LQLVKQFLDITDQYGIMLSSKKSILVQQNIEFLGLQFSNGVYRP*PHIAAELSNFPDENL 180
++ ++QF I ++YGIMLS++K I+ Q NI+FLG+Q + G + P H+A L +FPDENL
Sbjct: 583 IRSLRQFQGIVEEYGIMLSARKMIIAQPNIDFLGMQITEGRFTPQAHLATALLDFPDENL 642
Query: 181 TVKQVQLFLGIVNFLRQFLPKAAPYVHSLAQLLKKQPPPW 300
T +QVQ FLG++N++ F+P+ + L ++L K PP W
Sbjct: 643 TRRQVQQFLGVINYISDFIPQLSQITRPLQKMLTKNPPTW 682
>ref|XP_006403349.1| hypothetical protein EUTSA_v10003417mg, partial [Eutrema salsugineum]
gi|557104462|gb|ESQ44802.1| hypothetical protein
EUTSA_v10003417mg, partial [Eutrema salsugineum]
Length = 988
Score = 103 bits (258), Expect = 2e-20
Identities = 45/100 (45%), Positives = 70/100 (70%)
Frame = +1
Query: 1 LQLVKQFLDITDQYGIMLSSKKSILVQQNIEFLGLQFSNGVYRP*PHIAAELSNFPDENL 180
++ ++QF I ++YGIMLS++K I+ Q NI+FLG+Q + G + P H+A L +FPDENL
Sbjct: 836 IRSLRQFQGIVEEYGIMLSARKMIVAQPNIDFLGMQITEGKFTPQAHLATALLDFPDENL 895
Query: 181 TVKQVQLFLGIVNFLRQFLPKAAPYVHSLAQLLKKQPPPW 300
T +QVQ FLG++N++ F+P+ + L ++L K PP W
Sbjct: 896 TRRQVQQFLGVINYISDFIPQISQRTRPLQKMLTKNPPTW 935
>ref|XP_006405665.1| hypothetical protein EUTSA_v10028343mg, partial [Eutrema salsugineum]
gi|557106803|gb|ESQ47118.1| hypothetical protein
EUTSA_v10028343mg, partial [Eutrema salsugineum]
Length = 1104
Score = 103 bits (256), Expect = 3e-20
Identities = 43/100 (43%), Positives = 70/100 (70%)
Frame = +1
Query: 1 LQLVKQFLDITDQYGIMLSSKKSILVQQNIEFLGLQFSNGVYRP*PHIAAELSNFPDENL 180
++ ++QF I ++YGIMLS++K ++ Q NI+FLG+Q + G + P H+A L +FPDENL
Sbjct: 970 IRSLRQFQGIVEEYGIMLSARKMMIAQPNIDFLGMQITEGKFTPQAHLATALLDFPDENL 1029
Query: 181 TVKQVQLFLGIVNFLRQFLPKAAPYVHSLAQLLKKQPPPW 300
T +Q+Q FLG++N++ F+P+ + L ++L K PP W
Sbjct: 1030 TRRQIQQFLGVINYISDFIPQLSQMTRPLQKMLTKNPPTW 1069
>gb|AHN13810.1| reverse transcriptase [Aristotelia chilensis vein clearing virus]
Length = 758
Score = 102 bits (253), Expect = 7e-20
Identities = 49/100 (49%), Positives = 65/100 (65%)
Frame = +1
Query: 1 LQLVKQFLDITDQYGIMLSSKKSILVQQNIEFLGLQFSNGVYRP*PHIAAELSNFPDENL 180
+Q++ QF + QYGIMLS KK I+ + ++FLG+ G Y PHIA +L +FPDENL
Sbjct: 163 IQILYQFHQLCLQYGIMLSEKKMIIGTETVDFLGMHIHKGQYSLQPHIAKQLEDFPDENL 222
Query: 181 TVKQVQLFLGIVNFLRQFLPKAAPYVHSLAQLLKKQPPPW 300
T KQVQ FLGIVN++ F+ P + L Q+LKK P W
Sbjct: 223 TKKQVQQFLGIVNYMTDFIKGLTPVIRPLQQILKKNPLAW 262