BLASTX nr result
ID: Cocculus22_contig00025962
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00025962
(310 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004305658.1| PREDICTED: putative pentatricopeptide repeat... 159 3e-37
ref|XP_006481751.1| PREDICTED: putative pentatricopeptide repeat... 157 1e-36
ref|XP_007203758.1| hypothetical protein PRUPE_ppa003558mg [Prun... 157 1e-36
ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat... 157 2e-36
emb|CBI30310.3| unnamed protein product [Vitis vinifera] 157 2e-36
ref|XP_007144843.1| hypothetical protein PHAVU_007G188900g [Phas... 156 3e-36
ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat... 155 4e-36
ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat... 155 4e-36
gb|EXB54575.1| hypothetical protein L484_019144 [Morus notabilis] 155 7e-36
ref|XP_006430175.1| hypothetical protein CICLE_v10011274mg [Citr... 155 7e-36
ref|XP_004494044.1| PREDICTED: putative pentatricopeptide repeat... 153 2e-35
ref|XP_007027780.1| Pentatricopeptide repeat (PPR) superfamily p... 151 8e-35
gb|EPS64087.1| hypothetical protein M569_10688 [Genlisea aurea] 151 1e-34
ref|NP_187753.1| mitochondrial RNA editing factor 10 [Arabidopsi... 151 1e-34
ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat... 151 1e-34
ref|XP_002882733.1| pentatricopeptide repeat-containing protein ... 150 1e-34
gb|EYU35508.1| hypothetical protein MIMGU_mgv1a003586mg [Mimulus... 149 5e-34
ref|XP_002309422.2| hypothetical protein POPTR_0006s22800g [Popu... 149 5e-34
ref|XP_006407445.1| hypothetical protein EUTSA_v10022435mg [Eutr... 148 9e-34
ref|XP_006341234.1| PREDICTED: putative pentatricopeptide repeat... 147 2e-33
>ref|XP_004305658.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Fragaria vesca subsp. vesca]
Length = 608
Score = 159 bits (403), Expect = 3e-37
Identities = 72/103 (69%), Positives = 93/103 (90%)
Frame = +2
Query: 2 VKLFDEMLLTGIRPDRAAFVSLLSACSHAGLTEKGLEYFNGMVKNYRLHPGLEHYACVID 181
++LF+EM+++GIRPD+A FV++LSACSHAGLT++GLEYF M KNYRL PG EHY+C++D
Sbjct: 329 LELFEEMIVSGIRPDKAVFVTVLSACSHAGLTDEGLEYFAAMEKNYRLQPGPEHYSCMVD 388
Query: 182 LLGRSGRLEEAEKLIASMPMEPDGAVWGALLGACKIHGNVKLA 310
LLGR+GRL+EA++LI SM ++PDG VWGALLGACKIH NV+LA
Sbjct: 389 LLGRAGRLKEAKELIDSMQVKPDGGVWGALLGACKIHKNVELA 431
>ref|XP_006481751.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Citrus sinensis]
Length = 636
Score = 157 bits (397), Expect = 1e-36
Identities = 76/103 (73%), Positives = 87/103 (84%)
Frame = +2
Query: 2 VKLFDEMLLTGIRPDRAAFVSLLSACSHAGLTEKGLEYFNGMVKNYRLHPGLEHYACVID 181
V+LFDEML +GIRPD AFVS+LSACSHAGLT+KGLEYF GM Y L PG EHY C++D
Sbjct: 354 VQLFDEMLKSGIRPDGTAFVSVLSACSHAGLTDKGLEYFYGMKNKYGLQPGPEHYTCMVD 413
Query: 182 LLGRSGRLEEAEKLIASMPMEPDGAVWGALLGACKIHGNVKLA 310
LLGR+G+L EA +LI SM +EPDGAVWGALLGACKIH NV+LA
Sbjct: 414 LLGRAGQLNEALELIESMLVEPDGAVWGALLGACKIHKNVELA 456
>ref|XP_007203758.1| hypothetical protein PRUPE_ppa003558mg [Prunus persica]
gi|462399289|gb|EMJ04957.1| hypothetical protein
PRUPE_ppa003558mg [Prunus persica]
Length = 566
Score = 157 bits (397), Expect = 1e-36
Identities = 71/102 (69%), Positives = 91/102 (89%)
Frame = +2
Query: 5 KLFDEMLLTGIRPDRAAFVSLLSACSHAGLTEKGLEYFNGMVKNYRLHPGLEHYACVIDL 184
+LF++M++TGIRPD+A FV++LSACSHAGLT+KGLEYF M K L PG EHY+C++DL
Sbjct: 301 ELFNKMIMTGIRPDKAVFVTILSACSHAGLTDKGLEYFAAMEKRCGLQPGPEHYSCMVDL 360
Query: 185 LGRSGRLEEAEKLIASMPMEPDGAVWGALLGACKIHGNVKLA 310
LGR+GRL+EA++LI SMP++PDGAVWGALLGACKIH NV++A
Sbjct: 361 LGRAGRLQEAKELIESMPVKPDGAVWGALLGACKIHKNVEIA 402
>ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 157 bits (396), Expect = 2e-36
Identities = 76/103 (73%), Positives = 87/103 (84%)
Frame = +2
Query: 2 VKLFDEMLLTGIRPDRAAFVSLLSACSHAGLTEKGLEYFNGMVKNYRLHPGLEHYACVID 181
V+LFDEM+ + PD AAFVS+LSACSHAGLTEKGL YF M ++Y L PG EHY+CV+D
Sbjct: 346 VQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVD 405
Query: 182 LLGRSGRLEEAEKLIASMPMEPDGAVWGALLGACKIHGNVKLA 310
LLGR+GRLEEA KLI SM +EPDGAVWGALLGACKIH NV+LA
Sbjct: 406 LLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELA 448
>emb|CBI30310.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 157 bits (396), Expect = 2e-36
Identities = 76/103 (73%), Positives = 87/103 (84%)
Frame = +2
Query: 2 VKLFDEMLLTGIRPDRAAFVSLLSACSHAGLTEKGLEYFNGMVKNYRLHPGLEHYACVID 181
V+LFDEM+ + PD AAFVS+LSACSHAGLTEKGL YF M ++Y L PG EHY+CV+D
Sbjct: 346 VQLFDEMISSDELPDGAAFVSVLSACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVD 405
Query: 182 LLGRSGRLEEAEKLIASMPMEPDGAVWGALLGACKIHGNVKLA 310
LLGR+GRLEEA KLI SM +EPDGAVWGALLGACKIH NV+LA
Sbjct: 406 LLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHRNVELA 448
>ref|XP_007144843.1| hypothetical protein PHAVU_007G188900g [Phaseolus vulgaris]
gi|561018033|gb|ESW16837.1| hypothetical protein
PHAVU_007G188900g [Phaseolus vulgaris]
Length = 626
Score = 156 bits (394), Expect = 3e-36
Identities = 72/103 (69%), Positives = 87/103 (84%)
Frame = +2
Query: 2 VKLFDEMLLTGIRPDRAAFVSLLSACSHAGLTEKGLEYFNGMVKNYRLHPGLEHYACVID 181
++LFDEM+ +G+RPD+ FVS+LSACSHAGLT++GLEYF M Y L PG EHY+CV+D
Sbjct: 344 IELFDEMVKSGVRPDQTVFVSVLSACSHAGLTDRGLEYFEDMKMKYGLQPGPEHYSCVVD 403
Query: 182 LLGRSGRLEEAEKLIASMPMEPDGAVWGALLGACKIHGNVKLA 310
LLGR+GRLEEA LI SM ++PDGAVWGALLGACKIH NVK+A
Sbjct: 404 LLGRAGRLEEAVDLIMSMKVKPDGAVWGALLGACKIHKNVKIA 446
>ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 155 bits (393), Expect = 4e-36
Identities = 72/103 (69%), Positives = 89/103 (86%)
Frame = +2
Query: 2 VKLFDEMLLTGIRPDRAAFVSLLSACSHAGLTEKGLEYFNGMVKNYRLHPGLEHYACVID 181
V+LF EM+ +GI PD AFV +LSACSHAGLT++GLEYF M +NY+L PG EHY+C++D
Sbjct: 330 VQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVD 389
Query: 182 LLGRSGRLEEAEKLIASMPMEPDGAVWGALLGACKIHGNVKLA 310
LLGR+GRL+EA+ LI SMP++PDGAVWGALLGACKIH NV+LA
Sbjct: 390 LLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELA 432
>ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 155 bits (393), Expect = 4e-36
Identities = 72/103 (69%), Positives = 89/103 (86%)
Frame = +2
Query: 2 VKLFDEMLLTGIRPDRAAFVSLLSACSHAGLTEKGLEYFNGMVKNYRLHPGLEHYACVID 181
V+LF EM+ +GI PD AFV +LSACSHAGLT++GLEYF M +NY+L PG EHY+C++D
Sbjct: 339 VQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHYSCMVD 398
Query: 182 LLGRSGRLEEAEKLIASMPMEPDGAVWGALLGACKIHGNVKLA 310
LLGR+GRL+EA+ LI SMP++PDGAVWGALLGACKIH NV+LA
Sbjct: 399 LLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKIHKNVELA 441
>gb|EXB54575.1| hypothetical protein L484_019144 [Morus notabilis]
Length = 636
Score = 155 bits (391), Expect = 7e-36
Identities = 71/103 (68%), Positives = 88/103 (85%)
Frame = +2
Query: 2 VKLFDEMLLTGIRPDRAAFVSLLSACSHAGLTEKGLEYFNGMVKNYRLHPGLEHYACVID 181
V+LF+EM+ TGIRPD+ AFVS++SACSH+G+T+KGLEYF+ M Y L PG EHY+CV+D
Sbjct: 352 VQLFEEMIKTGIRPDKTAFVSIISACSHSGMTDKGLEYFSAMKSKYGLQPGPEHYSCVVD 411
Query: 182 LLGRSGRLEEAEKLIASMPMEPDGAVWGALLGACKIHGNVKLA 310
LLGR+GRL+EA+ LI SM + PDGAVWGALL ACKIH NV+LA
Sbjct: 412 LLGRAGRLKEAKDLINSMQVNPDGAVWGALLNACKIHKNVELA 454
>ref|XP_006430175.1| hypothetical protein CICLE_v10011274mg [Citrus clementina]
gi|557532232|gb|ESR43415.1| hypothetical protein
CICLE_v10011274mg [Citrus clementina]
Length = 636
Score = 155 bits (391), Expect = 7e-36
Identities = 75/103 (72%), Positives = 86/103 (83%)
Frame = +2
Query: 2 VKLFDEMLLTGIRPDRAAFVSLLSACSHAGLTEKGLEYFNGMVKNYRLHPGLEHYACVID 181
V+LFDEML +GIRPD AFVS+LSACSHAGLT+KGLEYF M Y L PG EHY C++D
Sbjct: 354 VQLFDEMLKSGIRPDGTAFVSVLSACSHAGLTDKGLEYFYAMKNKYGLQPGPEHYTCMVD 413
Query: 182 LLGRSGRLEEAEKLIASMPMEPDGAVWGALLGACKIHGNVKLA 310
LLGR+G+L EA +LI SM +EPDGAVWGALLGACKIH NV+LA
Sbjct: 414 LLGRAGQLNEALELIESMLVEPDGAVWGALLGACKIHKNVELA 456
>ref|XP_004494044.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cicer arietinum]
Length = 641
Score = 153 bits (387), Expect = 2e-35
Identities = 71/103 (68%), Positives = 88/103 (85%)
Frame = +2
Query: 2 VKLFDEMLLTGIRPDRAAFVSLLSACSHAGLTEKGLEYFNGMVKNYRLHPGLEHYACVID 181
V+LFDEM+ +G+RPDR FV++LSACSHAGLTEKGLEYF+ M + + L PG EHY+C++D
Sbjct: 359 VELFDEMVRSGVRPDRTVFVTVLSACSHAGLTEKGLEYFDEMERKFGLQPGPEHYSCLVD 418
Query: 182 LLGRSGRLEEAEKLIASMPMEPDGAVWGALLGACKIHGNVKLA 310
LLGR+GRL+EA I SM ++PDGAVWGALLGACKIH NV+LA
Sbjct: 419 LLGRAGRLKEAMNQIESMKVKPDGAVWGALLGACKIHRNVELA 461
>ref|XP_007027780.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508716385|gb|EOY08282.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 610
Score = 151 bits (382), Expect = 8e-35
Identities = 73/103 (70%), Positives = 87/103 (84%)
Frame = +2
Query: 2 VKLFDEMLLTGIRPDRAAFVSLLSACSHAGLTEKGLEYFNGMVKNYRLHPGLEHYACVID 181
V+LFDEM+ GIRPD AAFVS+L ACSHAGLTEKGL+YF M +RL PG EHY+CV+D
Sbjct: 328 VELFDEMIKGGIRPDGAAFVSVLCACSHAGLTEKGLDYFVEMETKHRLQPGPEHYSCVVD 387
Query: 182 LLGRSGRLEEAEKLIASMPMEPDGAVWGALLGACKIHGNVKLA 310
LLGR+GRL +A +LI SM ++PDGAVWGALLGACKIH NV++A
Sbjct: 388 LLGRAGRLYDALELIKSMQVKPDGAVWGALLGACKIHHNVEIA 430
>gb|EPS64087.1| hypothetical protein M569_10688 [Genlisea aurea]
Length = 628
Score = 151 bits (381), Expect = 1e-34
Identities = 70/102 (68%), Positives = 84/102 (82%)
Frame = +2
Query: 5 KLFDEMLLTGIRPDRAAFVSLLSACSHAGLTEKGLEYFNGMVKNYRLHPGLEHYACVIDL 184
+LFD+M+ I PD AAFVS+L+ACSHAGLT KGL+YF+ M + YRL P LEHYACV+DL
Sbjct: 348 ELFDDMVAAKIEPDGAAFVSVLAACSHAGLTRKGLDYFDSMERTYRLKPALEHYACVVDL 407
Query: 185 LGRSGRLEEAEKLIASMPMEPDGAVWGALLGACKIHGNVKLA 310
LGR+GRL +A +LI SMP++ DG VWGALLGACKIH NV LA
Sbjct: 408 LGRAGRLSDASRLIESMPIQADGPVWGALLGACKIHKNVSLA 449
>ref|NP_187753.1| mitochondrial RNA editing factor 10 [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At3g11460 gi|12322902|gb|AAG51440.1|AC008153_13
hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| mitochondrial RNA editing
factor 10 [Arabidopsis thaliana]
Length = 623
Score = 151 bits (381), Expect = 1e-34
Identities = 69/101 (68%), Positives = 84/101 (83%)
Frame = +2
Query: 8 LFDEMLLTGIRPDRAAFVSLLSACSHAGLTEKGLEYFNGMVKNYRLHPGLEHYACVIDLL 187
LFD+M+ GIRPD A FV +LSACSH+GLT+KGLE F M + Y+L PG EHY+C++DLL
Sbjct: 345 LFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLL 404
Query: 188 GRSGRLEEAEKLIASMPMEPDGAVWGALLGACKIHGNVKLA 310
GR+GRL+EA + I SMP+EPDGAVWGALLGACKIH NV +A
Sbjct: 405 GRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMA 445
>ref|XP_003537073.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Glycine max]
Length = 630
Score = 151 bits (381), Expect = 1e-34
Identities = 69/103 (66%), Positives = 86/103 (83%)
Frame = +2
Query: 2 VKLFDEMLLTGIRPDRAAFVSLLSACSHAGLTEKGLEYFNGMVKNYRLHPGLEHYACVID 181
++LFDEM+ + +RPD+ FVS+LSACSHAGLT++GLEYF M + Y L PG EHY+CV+D
Sbjct: 348 LELFDEMVESAVRPDKTVFVSVLSACSHAGLTDRGLEYFKEMERKYGLQPGPEHYSCVVD 407
Query: 182 LLGRSGRLEEAEKLIASMPMEPDGAVWGALLGACKIHGNVKLA 310
LLGR+GRLEEA LI SM ++PDGAVWGALLGACKIH N ++A
Sbjct: 408 LLGRAGRLEEAVNLIKSMKVKPDGAVWGALLGACKIHKNAEIA 450
>ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297328573|gb|EFH58992.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 620
Score = 150 bits (380), Expect = 1e-34
Identities = 69/101 (68%), Positives = 84/101 (83%)
Frame = +2
Query: 8 LFDEMLLTGIRPDRAAFVSLLSACSHAGLTEKGLEYFNGMVKNYRLHPGLEHYACVIDLL 187
LFD+M+ GIRPD A FV +LSACSH+GLT+KGLE F M + Y+L PG EHY+C++DLL
Sbjct: 342 LFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLL 401
Query: 188 GRSGRLEEAEKLIASMPMEPDGAVWGALLGACKIHGNVKLA 310
GR+GRL+EA + I SMP+EPDGAVWGALLGACKIH NV +A
Sbjct: 402 GRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHKNVDMA 442
>gb|EYU35508.1| hypothetical protein MIMGU_mgv1a003586mg [Mimulus guttatus]
Length = 576
Score = 149 bits (375), Expect = 5e-34
Identities = 71/103 (68%), Positives = 83/103 (80%)
Frame = +2
Query: 2 VKLFDEMLLTGIRPDRAAFVSLLSACSHAGLTEKGLEYFNGMVKNYRLHPGLEHYACVID 181
V+LFD M+ IRPD+A FV +L+ACSHAGLT+KGL+YF+ M Y L PG EHY+CV+D
Sbjct: 301 VELFDRMITARIRPDKAVFVCVLTACSHAGLTQKGLDYFHSMKSVYDLDPGSEHYSCVVD 360
Query: 182 LLGRSGRLEEAEKLIASMPMEPDGAVWGALLGACKIHGNVKLA 310
LLGR+GRL EA +LI SMPM PDG VWGALLGACKIH NV LA
Sbjct: 361 LLGRAGRLAEACRLIDSMPMGPDGPVWGALLGACKIHKNVDLA 403
>ref|XP_002309422.2| hypothetical protein POPTR_0006s22800g [Populus trichocarpa]
gi|550336888|gb|EEE92945.2| hypothetical protein
POPTR_0006s22800g [Populus trichocarpa]
Length = 604
Score = 149 bits (375), Expect = 5e-34
Identities = 70/103 (67%), Positives = 84/103 (81%)
Frame = +2
Query: 2 VKLFDEMLLTGIRPDRAAFVSLLSACSHAGLTEKGLEYFNGMVKNYRLHPGLEHYACVID 181
V+LFDEM+ GI+PD AFVS+LSACSHAGLT KGL+YF M + Y L PG EHY+C++D
Sbjct: 300 VELFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSCMVD 359
Query: 182 LLGRSGRLEEAEKLIASMPMEPDGAVWGALLGACKIHGNVKLA 310
LLGR+GRL EA +LI SM + DGA+WGALLGACKIH NV+LA
Sbjct: 360 LLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELA 402
>ref|XP_006407445.1| hypothetical protein EUTSA_v10022435mg [Eutrema salsugineum]
gi|557108591|gb|ESQ48898.1| hypothetical protein
EUTSA_v10022435mg [Eutrema salsugineum]
Length = 625
Score = 148 bits (373), Expect = 9e-34
Identities = 67/103 (65%), Positives = 85/103 (82%)
Frame = +2
Query: 2 VKLFDEMLLTGIRPDRAAFVSLLSACSHAGLTEKGLEYFNGMVKNYRLHPGLEHYACVID 181
+KLFD+M+ +G+RPD FV +LSACSH+GLT+KGLE F M + Y + PG EHY+CV+D
Sbjct: 345 LKLFDDMIKSGMRPDGTVFVMVLSACSHSGLTDKGLELFGSMKREYNVKPGPEHYSCVVD 404
Query: 182 LLGRSGRLEEAEKLIASMPMEPDGAVWGALLGACKIHGNVKLA 310
LLGR+GRL+EA + I SMP+EPDGAVWGALLGACKI+ NV +A
Sbjct: 405 LLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIYKNVDMA 447
>ref|XP_006341234.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Solanum tuberosum]
Length = 646
Score = 147 bits (370), Expect = 2e-33
Identities = 71/103 (68%), Positives = 83/103 (80%)
Frame = +2
Query: 2 VKLFDEMLLTGIRPDRAAFVSLLSACSHAGLTEKGLEYFNGMVKNYRLHPGLEHYACVID 181
V+LFD+M+ TGI+PD FVS+L+ACSH GLTEKGL Y + M + Y L P EHY+CV+D
Sbjct: 363 VELFDKMIKTGIQPDGTVFVSVLNACSHVGLTEKGLNYLDLMKREYGLKPCSEHYSCVVD 422
Query: 182 LLGRSGRLEEAEKLIASMPMEPDGAVWGALLGACKIHGNVKLA 310
LLGR+GRLEEA KLI M EPDGAVWGALLGACKIH NV+LA
Sbjct: 423 LLGRAGRLEEARKLIELMEDEPDGAVWGALLGACKIHKNVELA 465