BLASTX nr result
ID: Cocculus22_contig00025864
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00025864
(260 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera] 110 2e-22
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 110 3e-22
gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol... 109 5e-22
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 109 5e-22
emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera] 108 6e-22
emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera] 108 8e-22
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 108 8e-22
emb|CAN60844.1| hypothetical protein VITISV_005976 [Vitis vinifera] 107 2e-21
ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660... 107 2e-21
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 107 2e-21
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 107 2e-21
emb|CAB46043.1| retrotransposon like protein [Arabidopsis thalia... 106 4e-21
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 105 5e-21
emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera] 105 5e-21
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 105 9e-21
emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera] 104 1e-20
ref|XP_007014689.1| Uncharacterized protein TCM_040047 [Theobrom... 104 1e-20
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc... 104 1e-20
gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis tha... 103 2e-20
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 103 3e-20
>emb|CAN59952.1| hypothetical protein VITISV_006720 [Vitis vinifera]
Length = 1365
Score = 110 bits (275), Expect = 2e-22
Identities = 47/85 (55%), Positives = 64/85 (75%)
Frame = +1
Query: 1 RKHRHVIETGLSMLGHASLPLKFWVYSFRIVVYLINRLPSPITNSQSLFQLLYNKALDYS 180
RKHRHV+ETGL++L HA LPLKFW Y+F+ +LINR+PS + + S + L+ + DY
Sbjct: 595 RKHRHVVETGLALLAHAGLPLKFWSYAFQTATFLINRMPSKVLQNASPYFALFKRNPDYK 654
Query: 181 ILRVFGCMCFPLIRP*THYKLQFRS 255
LRVFGC+C+P IRP ++KLQ+RS
Sbjct: 655 FLRVFGCLCYPFIRPYNNHKLQYRS 679
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 110 bits (274), Expect = 3e-22
Identities = 47/85 (55%), Positives = 64/85 (75%)
Frame = +1
Query: 1 RKHRHVIETGLSMLGHASLPLKFWVYSFRIVVYLINRLPSPITNSQSLFQLLYNKALDYS 180
RKHRHV+ETGL++L HA LPLKFW Y+F+ +LINR+PS + + S + L+ + DY
Sbjct: 645 RKHRHVVETGLALLAHAGLPLKFWSYAFQTATFLINRMPSKVLXNASPYFALFKRNPDYK 704
Query: 181 ILRVFGCMCFPLIRP*THYKLQFRS 255
LRVFGC+C+P IRP ++KLQ+RS
Sbjct: 705 FLRVFGCLCYPFIRPYNNHKLQYRS 729
>gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 969
Score = 109 bits (272), Expect = 5e-22
Identities = 48/85 (56%), Positives = 64/85 (75%)
Frame = +1
Query: 1 RKHRHVIETGLSMLGHASLPLKFWVYSFRIVVYLINRLPSPITNSQSLFQLLYNKALDYS 180
RKHRH++E GLS+L HAS+PLKFW +F YLINR P+ I N + F+ L++K DYS
Sbjct: 465 RKHRHIVEVGLSLLAHASMPLKFWDEAFLAAAYLINRTPTKILNLDTPFERLFHKQPDYS 524
Query: 181 ILRVFGCMCFPLIRP*THYKLQFRS 255
+LR+FGC+C+P +RP +KLQFRS
Sbjct: 525 VLRIFGCVCWPNLRPYNSHKLQFRS 549
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 1313
Score = 109 bits (272), Expect = 5e-22
Identities = 48/85 (56%), Positives = 64/85 (75%)
Frame = +1
Query: 1 RKHRHVIETGLSMLGHASLPLKFWVYSFRIVVYLINRLPSPITNSQSLFQLLYNKALDYS 180
RKHRH++E GLS+L HAS+PLKFW +F YLINR P+ I N + F+ L++K DYS
Sbjct: 465 RKHRHIVEVGLSLLAHASMPLKFWDEAFLAAAYLINRTPTKILNLDTPFERLFHKQPDYS 524
Query: 181 ILRVFGCMCFPLIRP*THYKLQFRS 255
+LR+FGC+C+P +RP +KLQFRS
Sbjct: 525 VLRIFGCVCWPNLRPYNSHKLQFRS 549
>emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]
Length = 1198
Score = 108 bits (271), Expect = 6e-22
Identities = 46/85 (54%), Positives = 64/85 (75%)
Frame = +1
Query: 1 RKHRHVIETGLSMLGHASLPLKFWVYSFRIVVYLINRLPSPITNSQSLFQLLYNKALDYS 180
RKHRHV+ETGL++L HASLP++FW Y+F+ +LINR+PS + + S + L+ K DY
Sbjct: 554 RKHRHVVETGLALLAHASLPMEFWQYAFQTATFLINRMPSKVLQNNSPYFTLFQKVPDYE 613
Query: 181 ILRVFGCMCFPLIRP*THYKLQFRS 255
LRVF C+C+P IRP ++KLQ+RS
Sbjct: 614 SLRVFSCLCYPFIRPYNNHKLQYRS 638
>emb|CAN65942.1| hypothetical protein VITISV_001716 [Vitis vinifera]
Length = 1319
Score = 108 bits (270), Expect = 8e-22
Identities = 46/85 (54%), Positives = 64/85 (75%)
Frame = +1
Query: 1 RKHRHVIETGLSMLGHASLPLKFWVYSFRIVVYLINRLPSPITNSQSLFQLLYNKALDYS 180
RKHRHV+ETGL++L HASLP++FW Y+F+ +LINR+PS + + S + L+ K +Y
Sbjct: 588 RKHRHVVETGLALLAHASLPMEFWQYAFQTATFLINRMPSKVLQNNSPYFTLFQKVPNYK 647
Query: 181 ILRVFGCMCFPLIRP*THYKLQFRS 255
LRVFGC+C+P IRP +KLQ+RS
Sbjct: 648 SLRVFGCLCYPFIRPCNSHKLQYRS 672
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 108 bits (270), Expect = 8e-22
Identities = 46/85 (54%), Positives = 66/85 (77%)
Frame = +1
Query: 1 RKHRHVIETGLSMLGHASLPLKFWVYSFRIVVYLINRLPSPITNSQSLFQLLYNKALDYS 180
RKHRH++E G+++L ASLP K+W +FR VYLINRLP+P+ ++S ++L+++ YS
Sbjct: 667 RKHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLINRLPTPVLKNKSPLEVLFHQKPSYS 726
Query: 181 ILRVFGCMCFPLIRP*THYKLQFRS 255
L+VFGCMC+P +RP H+KLQFRS
Sbjct: 727 XLKVFGCMCYPNLRPFNHHKLQFRS 751
>emb|CAN60844.1| hypothetical protein VITISV_005976 [Vitis vinifera]
Length = 1380
Score = 107 bits (267), Expect = 2e-21
Identities = 47/85 (55%), Positives = 63/85 (74%)
Frame = +1
Query: 1 RKHRHVIETGLSMLGHASLPLKFWVYSFRIVVYLINRLPSPITNSQSLFQLLYNKALDYS 180
RKHRHV+ETGL++L HASLP+K+W Y+F+ +LIN +PS + S + L+ K LDY
Sbjct: 440 RKHRHVVETGLALLSHASLPMKYWHYAFQTSTFLINGMPSKVLKYDSPYFTLFRKHLDYK 499
Query: 181 ILRVFGCMCFPLIRP*THYKLQFRS 255
LRVFGC+C+P IRP +KLQ+RS
Sbjct: 500 SLRVFGCLCYPFIRPYNTHKLQYRS 524
>ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660325 [Glycine max]
Length = 868
Score = 107 bits (266), Expect = 2e-21
Identities = 50/85 (58%), Positives = 62/85 (72%)
Frame = +1
Query: 1 RKHRHVIETGLSMLGHASLPLKFWVYSFRIVVYLINRLPSPITNSQSLFQLLYNKALDYS 180
RKHR+ +ETGL++L ++LPLKFW +SF YLINRLPS N+QSL+ L NK DYS
Sbjct: 729 RKHRYTVETGLALLAQSTLPLKFWDHSFVTAAYLINRLPSVSLNNQSLYFKLLNKQPDYS 788
Query: 181 ILRVFGCMCFPLIRP*THYKLQFRS 255
LRVFGC CFP +RP +KL +RS
Sbjct: 789 CLRVFGCSCFPFLRPYNSHKLDYRS 813
>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
Length = 1449
Score = 107 bits (266), Expect = 2e-21
Identities = 46/86 (53%), Positives = 65/86 (75%)
Frame = +1
Query: 1 RKHRHVIETGLSMLGHASLPLKFWVYSFRIVVYLINRLPSPITNSQSLFQLLYNKALDYS 180
RK RH+IETGL++L ASLP KFW+Y+F ++LINRLP+ + N QS FQ+L+ K+ +Y
Sbjct: 681 RKLRHIIETGLALLATASLPFKFWLYAFHTAIFLINRLPTKVLNYQSPFQILFGKSPNYH 740
Query: 181 ILRVFGCMCFPLIRP*THYKLQFRSA 258
I ++FGC+C+P IRP KL +RS+
Sbjct: 741 IFKIFGCLCYPYIRPYNKNKLSYRSS 766
>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
Length = 1271
Score = 107 bits (266), Expect = 2e-21
Identities = 46/86 (53%), Positives = 65/86 (75%)
Frame = +1
Query: 1 RKHRHVIETGLSMLGHASLPLKFWVYSFRIVVYLINRLPSPITNSQSLFQLLYNKALDYS 180
RK RH+IETGL++L ASLP KFW+Y+F ++LINRLP+ + N QS FQ+L+ K+ +Y
Sbjct: 490 RKLRHIIETGLALLATASLPFKFWLYAFHTTIFLINRLPTKVLNYQSPFQILFGKSPNYH 549
Query: 181 ILRVFGCMCFPLIRP*THYKLQFRSA 258
I ++FGC+C+P IRP KL +RS+
Sbjct: 550 IFKIFGCLCYPYIRPYNKNKLSYRSS 575
>emb|CAB46043.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7268438|emb|CAB80958.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1474
Score = 106 bits (264), Expect = 4e-21
Identities = 46/85 (54%), Positives = 64/85 (75%)
Frame = +1
Query: 1 RKHRHVIETGLSMLGHASLPLKFWVYSFRIVVYLINRLPSPITNSQSLFQLLYNKALDYS 180
RKHRH++ETGL++L AS+P ++W Y+F VYLINR+P+P+ + +S FQ L+ +Y
Sbjct: 628 RKHRHIVETGLTLLTQASVPREYWPYAFAAAVYLINRMPTPVLSMESPFQKLFGSKPNYE 687
Query: 181 ILRVFGCMCFPLIRP*THYKLQFRS 255
LRVFGC+CFP +RP TH KL+ RS
Sbjct: 688 RLRVFGCLCFPWLRPYTHNKLEERS 712
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 105 bits (263), Expect = 5e-21
Identities = 46/85 (54%), Positives = 65/85 (76%)
Frame = +1
Query: 1 RKHRHVIETGLSMLGHASLPLKFWVYSFRIVVYLINRLPSPITNSQSLFQLLYNKALDYS 180
RKHRH++E GLS+L HAS+PLKFW +F++ YLINR+PS + ++ S + L+ + DYS
Sbjct: 612 RKHRHIVEIGLSLLSHASMPLKFWDEAFQVATYLINRVPSRVIHNISPLEKLFKQKPDYS 671
Query: 181 ILRVFGCMCFPLIRP*THYKLQFRS 255
LR+FGC C+P +RP ++KLQFRS
Sbjct: 672 SLRIFGCACWPNLRPYNNHKLQFRS 696
>emb|CAN63649.1| hypothetical protein VITISV_037657 [Vitis vinifera]
Length = 1131
Score = 105 bits (263), Expect = 5e-21
Identities = 45/85 (52%), Positives = 63/85 (74%)
Frame = +1
Query: 1 RKHRHVIETGLSMLGHASLPLKFWVYSFRIVVYLINRLPSPITNSQSLFQLLYNKALDYS 180
RKHRHV+E GLS+L HAS+PLK+W ++F+ +YLINRLPS + N S ++ LY+ +YS
Sbjct: 595 RKHRHVVEVGLSLLAHASIPLKYWPFAFQSALYLINRLPSSVLNFSSPYKTLYHCLPNYS 654
Query: 181 ILRVFGCMCFPLIRP*THYKLQFRS 255
LRV+GC C+P +RP +K +RS
Sbjct: 655 FLRVYGCTCYPFLRPFNRHKFAYRS 679
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 105 bits (261), Expect = 9e-21
Identities = 45/85 (52%), Positives = 62/85 (72%)
Frame = +1
Query: 1 RKHRHVIETGLSMLGHASLPLKFWVYSFRIVVYLINRLPSPITNSQSLFQLLYNKALDYS 180
RKHRHV+ETGL++L HASLP+K+W Y+F+ +LINR+PS + S + L+ + DY
Sbjct: 650 RKHRHVVETGLALLSHASLPMKYWHYAFQTXTFLINRMPSKVLEYDSPYFTLFRRHPDYK 709
Query: 181 ILRVFGCMCFPLIRP*THYKLQFRS 255
RVFGC+C+P IRP +KLQ+RS
Sbjct: 710 SFRVFGCLCYPFIRPYNTHKLQYRS 734
>emb|CAN65591.1| hypothetical protein VITISV_042091 [Vitis vinifera]
Length = 1427
Score = 104 bits (260), Expect = 1e-20
Identities = 49/85 (57%), Positives = 61/85 (71%)
Frame = +1
Query: 1 RKHRHVIETGLSMLGHASLPLKFWVYSFRIVVYLINRLPSPITNSQSLFQLLYNKALDYS 180
RKHRHV+ETGL+ML ASLPLK+W Y+F YLINRLP+PI QS F+ L+ +Y
Sbjct: 613 RKHRHVVETGLAMLHKASLPLKYWSYAFLAAAYLINRLPTPILKHQSPFESLFQHMPNYD 672
Query: 181 ILRVFGCMCFPLIRP*THYKLQFRS 255
LR FGC+CFP +RP + +KL RS
Sbjct: 673 KLRAFGCLCFPWMRPYSDHKLDKRS 697
>ref|XP_007014689.1| Uncharacterized protein TCM_040047 [Theobroma cacao]
gi|508785052|gb|EOY32308.1| Uncharacterized protein
TCM_040047 [Theobroma cacao]
Length = 678
Score = 104 bits (259), Expect = 1e-20
Identities = 42/85 (49%), Positives = 68/85 (80%)
Frame = +1
Query: 1 RKHRHVIETGLSMLGHASLPLKFWVYSFRIVVYLINRLPSPITNSQSLFQLLYNKALDYS 180
R+H+H++ETGL++L HAS+PLKFW ++F++ VY IN+LP+P+ N +S F++L+ +YS
Sbjct: 338 RRHKHIVETGLTLLHHASMPLKFWSHAFQVAVYPINKLPTPLLNLKSPFEILFETPPNYS 397
Query: 181 ILRVFGCMCFPLIRP*THYKLQFRS 255
L+VFGC+C+P ++P +KLQ +S
Sbjct: 398 KLKVFGCLCYPWLKPYNKHKLQPKS 422
>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1478
Score = 104 bits (259), Expect = 1e-20
Identities = 46/85 (54%), Positives = 64/85 (75%)
Frame = +1
Query: 1 RKHRHVIETGLSMLGHASLPLKFWVYSFRIVVYLINRLPSPITNSQSLFQLLYNKALDYS 180
RKHRH++E GLS+L HAS+PLKFW +F+ YLINR+PS + ++ S + L+ + DYS
Sbjct: 645 RKHRHIVEIGLSLLSHASMPLKFWDEAFQAATYLINRVPSRVIHNISPLEKLFKQKPDYS 704
Query: 181 ILRVFGCMCFPLIRP*THYKLQFRS 255
LR+FGC C+P +RP ++KLQFRS
Sbjct: 705 SLRIFGCACWPNLRPYNNHKLQFRS 729
>gb|AAK43485.1|AC084807_10 polyprotein, putative [Arabidopsis thaliana]
gi|225898008|dbj|BAH30336.1| hypothetical protein
[Arabidopsis thaliana]
Length = 1459
Score = 103 bits (258), Expect = 2e-20
Identities = 46/85 (54%), Positives = 63/85 (74%)
Frame = +1
Query: 1 RKHRHVIETGLSMLGHASLPLKFWVYSFRIVVYLINRLPSPITNSQSLFQLLYNKALDYS 180
RKHRH++ETGL++L AS+P ++W Y+F VYLINR+P+P+ QS FQ L+ + +Y
Sbjct: 633 RKHRHIVETGLTLLTQASVPREYWTYAFATAVYLINRMPTPVLCLQSPFQKLFGSSPNYQ 692
Query: 181 ILRVFGCMCFPLIRP*THYKLQFRS 255
LRVFGC+CFP +RP T KL+ RS
Sbjct: 693 RLRVFGCLCFPWLRPYTRNKLEERS 717
>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 103 bits (257), Expect = 3e-20
Identities = 44/85 (51%), Positives = 62/85 (72%)
Frame = +1
Query: 1 RKHRHVIETGLSMLGHASLPLKFWVYSFRIVVYLINRLPSPITNSQSLFQLLYNKALDYS 180
RKHRH++ETGL++L HAS+P +W Y+F + VYLINRLP+P+ +S FQ L+ + +Y
Sbjct: 592 RKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYD 651
Query: 181 ILRVFGCMCFPLIRP*THYKLQFRS 255
LRVFGC C+P +RP +KL +S
Sbjct: 652 KLRVFGCACYPWLRPYNQHKLDDKS 676