BLASTX nr result
ID: Cocculus22_contig00025761
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00025761
(252 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007034655.1| RING-H2 group F1A, putative isoform 3 [Theob... 63 5e-08
ref|XP_007034654.1| RING-H2 group F1A, putative isoform 2 [Theob... 63 5e-08
ref|XP_007034653.1| RING-H2 group F1A, putative isoform 1 [Theob... 63 5e-08
ref|XP_006286184.1| hypothetical protein CARUB_v10007748mg [Caps... 62 1e-07
ref|XP_002517194.1| protein binding protein, putative [Ricinus c... 61 2e-07
dbj|BAC42605.1| putative RING-H2 finger protein RHF1a [Arabidops... 60 2e-07
ref|XP_006414765.1| hypothetical protein EUTSA_v10025539mg [Eutr... 60 2e-07
gb|AAC69855.1| RING-H2 finger protein RHF1a, partial [Arabidopsi... 60 2e-07
ref|XP_002870329.1| hypothetical protein ARALYDRAFT_493488 [Arab... 60 2e-07
ref|NP_193158.2| E3 ubiquitin-protein ligase RHF1A [Arabidopsis ... 60 2e-07
emb|CAB46003.1| RING-H2 finger protein RHF1a [Arabidopsis thalia... 60 2e-07
ref|XP_002281045.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A... 60 3e-07
ref|XP_006489325.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A... 60 4e-07
ref|XP_006419852.1| hypothetical protein CICLE_v10005221mg [Citr... 60 4e-07
ref|XP_006468313.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 59 9e-07
gb|ABR18468.1| unknown [Picea sitchensis] 58 1e-06
gb|ABK25021.1| unknown [Picea sitchensis] 58 1e-06
ref|XP_006378404.1| hypothetical protein POPTR_0010s10240g [Popu... 58 2e-06
ref|XP_002314719.2| zinc finger family protein [Populus trichoca... 58 2e-06
gb|EXB55010.1| E3 ubiquitin-protein ligase RHF1A [Morus notabilis] 57 2e-06
>ref|XP_007034655.1| RING-H2 group F1A, putative isoform 3 [Theobroma cacao]
gi|508713684|gb|EOY05581.1| RING-H2 group F1A, putative
isoform 3 [Theobroma cacao]
Length = 432
Score = 62.8 bits (151), Expect = 5e-08
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +1
Query: 169 CSICLEPFSSQDPSTVTTCRHEYHLQCI 252
CSICLEPFS+QDP+TVT+CRHEYHLQCI
Sbjct: 50 CSICLEPFSAQDPATVTSCRHEYHLQCI 77
>ref|XP_007034654.1| RING-H2 group F1A, putative isoform 2 [Theobroma cacao]
gi|508713683|gb|EOY05580.1| RING-H2 group F1A, putative
isoform 2 [Theobroma cacao]
Length = 364
Score = 62.8 bits (151), Expect = 5e-08
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +1
Query: 169 CSICLEPFSSQDPSTVTTCRHEYHLQCI 252
CSICLEPFS+QDP+TVT+CRHEYHLQCI
Sbjct: 50 CSICLEPFSAQDPATVTSCRHEYHLQCI 77
>ref|XP_007034653.1| RING-H2 group F1A, putative isoform 1 [Theobroma cacao]
gi|508713682|gb|EOY05579.1| RING-H2 group F1A, putative
isoform 1 [Theobroma cacao]
Length = 407
Score = 62.8 bits (151), Expect = 5e-08
Identities = 25/28 (89%), Positives = 28/28 (100%)
Frame = +1
Query: 169 CSICLEPFSSQDPSTVTTCRHEYHLQCI 252
CSICLEPFS+QDP+TVT+CRHEYHLQCI
Sbjct: 50 CSICLEPFSAQDPATVTSCRHEYHLQCI 77
>ref|XP_006286184.1| hypothetical protein CARUB_v10007748mg [Capsella rubella]
gi|482554889|gb|EOA19082.1| hypothetical protein
CARUB_v10007748mg [Capsella rubella]
Length = 361
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +1
Query: 169 CSICLEPFSSQDPSTVTTCRHEYHLQCI 252
CSICLEPFS QDPSTVT+C+HEYHLQCI
Sbjct: 40 CSICLEPFSLQDPSTVTSCKHEYHLQCI 67
>ref|XP_002517194.1| protein binding protein, putative [Ricinus communis]
gi|223543829|gb|EEF45357.1| protein binding protein,
putative [Ricinus communis]
Length = 414
Score = 60.8 bits (146), Expect = 2e-07
Identities = 24/28 (85%), Positives = 28/28 (100%)
Frame = +1
Query: 169 CSICLEPFSSQDPSTVTTCRHEYHLQCI 252
CSICLEPF+SQ+PSTVT+C+HEYHLQCI
Sbjct: 54 CSICLEPFTSQNPSTVTSCKHEYHLQCI 81
>dbj|BAC42605.1| putative RING-H2 finger protein RHF1a [Arabidopsis thaliana]
Length = 371
Score = 60.5 bits (145), Expect = 2e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +1
Query: 169 CSICLEPFSSQDPSTVTTCRHEYHLQCI 252
CSICLEPF+ QDPSTVT+C+HEYHLQCI
Sbjct: 46 CSICLEPFTLQDPSTVTSCKHEYHLQCI 73
>ref|XP_006414765.1| hypothetical protein EUTSA_v10025539mg [Eutrema salsugineum]
gi|557115935|gb|ESQ56218.1| hypothetical protein
EUTSA_v10025539mg [Eutrema salsugineum]
Length = 362
Score = 60.5 bits (145), Expect = 2e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +1
Query: 169 CSICLEPFSSQDPSTVTTCRHEYHLQCI 252
CSICLEPF+ QDPSTVT+C+HEYHLQCI
Sbjct: 44 CSICLEPFTVQDPSTVTSCKHEYHLQCI 71
>gb|AAC69855.1| RING-H2 finger protein RHF1a, partial [Arabidopsis thaliana]
Length = 329
Score = 60.5 bits (145), Expect = 2e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +1
Query: 169 CSICLEPFSSQDPSTVTTCRHEYHLQCI 252
CSICLEPF+ QDPSTVT+C+HEYHLQCI
Sbjct: 4 CSICLEPFTLQDPSTVTSCKHEYHLQCI 31
>ref|XP_002870329.1| hypothetical protein ARALYDRAFT_493488 [Arabidopsis lyrata subsp.
lyrata] gi|297316165|gb|EFH46588.1| hypothetical protein
ARALYDRAFT_493488 [Arabidopsis lyrata subsp. lyrata]
Length = 365
Score = 60.5 bits (145), Expect = 2e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +1
Query: 169 CSICLEPFSSQDPSTVTTCRHEYHLQCI 252
CSICLEPF+ QDPSTVT+C+HEYHLQCI
Sbjct: 40 CSICLEPFTLQDPSTVTSCKHEYHLQCI 67
>ref|NP_193158.2| E3 ubiquitin-protein ligase RHF1A [Arabidopsis thaliana]
gi|75339838|sp|Q4TU14.1|RHF1A_ARATH RecName: Full=E3
ubiquitin-protein ligase RHF1A; AltName: Full=RING-H2
zinc finger protein RHF1a gi|66865948|gb|AAY57608.1|
RING finger family protein [Arabidopsis thaliana]
gi|332657995|gb|AEE83395.1| E3 ubiquitin-protein ligase
RHF1A [Arabidopsis thaliana]
Length = 371
Score = 60.5 bits (145), Expect = 2e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +1
Query: 169 CSICLEPFSSQDPSTVTTCRHEYHLQCI 252
CSICLEPF+ QDPSTVT+C+HEYHLQCI
Sbjct: 46 CSICLEPFTLQDPSTVTSCKHEYHLQCI 73
>emb|CAB46003.1| RING-H2 finger protein RHF1a [Arabidopsis thaliana]
gi|7268127|emb|CAB78464.1| RING-H2 finger protein RHF1a
[Arabidopsis thaliana]
Length = 376
Score = 60.5 bits (145), Expect = 2e-07
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +1
Query: 169 CSICLEPFSSQDPSTVTTCRHEYHLQCI 252
CSICLEPF+ QDPSTVT+C+HEYHLQCI
Sbjct: 46 CSICLEPFTLQDPSTVTSCKHEYHLQCI 73
>ref|XP_002281045.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A [Vitis vinifera]
gi|297737001|emb|CBI26202.3| unnamed protein product
[Vitis vinifera]
Length = 391
Score = 60.1 bits (144), Expect = 3e-07
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +1
Query: 169 CSICLEPFSSQDPSTVTTCRHEYHLQCI 252
CSICLEPFS+ DP+T+T CRHEYHLQCI
Sbjct: 29 CSICLEPFSTDDPATITNCRHEYHLQCI 56
>ref|XP_006489325.1| PREDICTED: E3 ubiquitin-protein ligase RHF1A-like [Citrus sinensis]
Length = 367
Score = 59.7 bits (143), Expect = 4e-07
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +1
Query: 169 CSICLEPFSSQDPSTVTTCRHEYHLQCI 252
CSICLEPFS+ DP+TVT+C+HEYHLQCI
Sbjct: 28 CSICLEPFSTDDPATVTSCKHEYHLQCI 55
>ref|XP_006419852.1| hypothetical protein CICLE_v10005221mg [Citrus clementina]
gi|557521725|gb|ESR33092.1| hypothetical protein
CICLE_v10005221mg [Citrus clementina]
Length = 367
Score = 59.7 bits (143), Expect = 4e-07
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +1
Query: 169 CSICLEPFSSQDPSTVTTCRHEYHLQCI 252
CSICLEPFS+ DP+TVT+C+HEYHLQCI
Sbjct: 28 CSICLEPFSTDDPATVTSCKHEYHLQCI 55
>ref|XP_006468313.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X2
[Citrus sinensis]
Length = 378
Score = 58.5 bits (140), Expect = 9e-07
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +1
Query: 169 CSICLEPFSSQDPSTVTTCRHEYHLQCI 252
CSICLEPFS DPST+T+CRHE+HLQC+
Sbjct: 30 CSICLEPFSDSDPSTLTSCRHEFHLQCV 57
>gb|ABR18468.1| unknown [Picea sitchensis]
Length = 423
Score = 58.2 bits (139), Expect = 1e-06
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +1
Query: 169 CSICLEPFSSQDPSTVTTCRHEYHLQCI 252
CSICLEPF+ DP+TVT+C+HEYHLQCI
Sbjct: 30 CSICLEPFTDNDPATVTSCKHEYHLQCI 57
>gb|ABK25021.1| unknown [Picea sitchensis]
Length = 422
Score = 58.2 bits (139), Expect = 1e-06
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +1
Query: 169 CSICLEPFSSQDPSTVTTCRHEYHLQCI 252
CSICLEPF DPSTVT+C+HEYHLQCI
Sbjct: 27 CSICLEPFCETDPSTVTSCKHEYHLQCI 54
>ref|XP_006378404.1| hypothetical protein POPTR_0010s10240g [Populus trichocarpa]
gi|550329497|gb|ERP56201.1| hypothetical protein
POPTR_0010s10240g [Populus trichocarpa]
Length = 405
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +1
Query: 169 CSICLEPFSSQDPSTVTTCRHEYHLQCI 252
CSICL+PF++QDP+TVT C HEYHLQCI
Sbjct: 45 CSICLDPFTAQDPATVTCCNHEYHLQCI 72
>ref|XP_002314719.2| zinc finger family protein [Populus trichocarpa]
gi|550329496|gb|EEF00890.2| zinc finger family protein
[Populus trichocarpa]
Length = 418
Score = 57.8 bits (138), Expect = 2e-06
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +1
Query: 169 CSICLEPFSSQDPSTVTTCRHEYHLQCI 252
CSICL+PF++QDP+TVT C HEYHLQCI
Sbjct: 45 CSICLDPFTAQDPATVTCCNHEYHLQCI 72
>gb|EXB55010.1| E3 ubiquitin-protein ligase RHF1A [Morus notabilis]
Length = 424
Score = 57.4 bits (137), Expect = 2e-06
Identities = 21/28 (75%), Positives = 26/28 (92%)
Frame = +1
Query: 169 CSICLEPFSSQDPSTVTTCRHEYHLQCI 252
CSICLEPF+S DP+T+T+C+HEYHL CI
Sbjct: 43 CSICLEPFNSDDPATITSCKHEYHLHCI 70