BLASTX nr result
ID: Cocculus22_contig00025720
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00025720
(299 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 136 3e-30
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 136 3e-30
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera] 136 3e-30
ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A... 124 2e-26
gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza] 123 3e-26
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 119 3e-25
ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Caps... 116 3e-24
ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabid... 115 6e-24
dbj|BAF01243.1| hypothetical protein [Arabidopsis thaliana] 115 6e-24
gb|AAC62123.1| hypothetical protein [Arabidopsis thaliana] 115 6e-24
ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutr... 114 1e-23
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu... 113 2e-23
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu... 113 2e-23
gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Mimulus... 112 4e-23
ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Popu... 112 4e-23
ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prun... 111 1e-22
gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus no... 110 2e-22
gb|EMT22628.1| hypothetical protein F775_22922 [Aegilops tauschii] 110 2e-22
ref|NP_179582.2| RNA-dependent RNA polymerase family protein [Ar... 109 5e-22
ref|NP_001042303.1| Os01g0197900 [Oryza sativa Japonica Group] g... 109 5e-22
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 136 bits (343), Expect = 3e-30
Identities = 66/98 (67%), Positives = 79/98 (80%)
Frame = -1
Query: 296 ELEDRILQKFLTTRFNQSNSIGVAADSWLSFMDRLLTLGNECAMEKNCLKEKILKLVDIY 117
ELE + Q FLTTRF S++IG+AAD+WL FMDRLLTL ++C+ EK CLK K+L+L DIY
Sbjct: 678 ELEHELFQLFLTTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIY 737
Query: 116 YDALDAPKTGKKVLVPDELRAEKFPHFMERTNSYHSKS 3
YDALDAPK+G KV V EL+AEKFPHFM R +SYHS S
Sbjct: 738 YDALDAPKSGMKVNVSKELKAEKFPHFMGRESSYHSTS 775
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 136 bits (343), Expect = 3e-30
Identities = 66/98 (67%), Positives = 79/98 (80%)
Frame = -1
Query: 296 ELEDRILQKFLTTRFNQSNSIGVAADSWLSFMDRLLTLGNECAMEKNCLKEKILKLVDIY 117
ELE + Q FLTTRF S++IG+AAD+WL FMDRLLTL ++C+ EK CLK K+L+L DIY
Sbjct: 692 ELEHELFQLFLTTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIY 751
Query: 116 YDALDAPKTGKKVLVPDELRAEKFPHFMERTNSYHSKS 3
YDALDAPK+G KV V EL+AEKFPHFM R +SYHS S
Sbjct: 752 YDALDAPKSGMKVNVSKELKAEKFPHFMGRESSYHSTS 789
>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
Length = 1202
Score = 136 bits (343), Expect = 3e-30
Identities = 66/98 (67%), Positives = 79/98 (80%)
Frame = -1
Query: 296 ELEDRILQKFLTTRFNQSNSIGVAADSWLSFMDRLLTLGNECAMEKNCLKEKILKLVDIY 117
ELE + Q FLTTRF S++IG+AAD+WL FMDRLLTL ++C+ EK CLK K+L+L DIY
Sbjct: 961 ELEHELFQLFLTTRFQTSSAIGMAADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIY 1020
Query: 116 YDALDAPKTGKKVLVPDELRAEKFPHFMERTNSYHSKS 3
YDALDAPK+G KV V EL+AEKFPHFM R +SYHS S
Sbjct: 1021 YDALDAPKSGMKVNVSKELKAEKFPHFMGRESSYHSTS 1058
>ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
gi|548857326|gb|ERN15132.1| hypothetical protein
AMTR_s00056p00110240 [Amborella trichopoda]
Length = 988
Score = 124 bits (310), Expect = 2e-26
Identities = 59/98 (60%), Positives = 75/98 (76%)
Frame = -1
Query: 296 ELEDRILQKFLTTRFNQSNSIGVAADSWLSFMDRLLTLGNECAMEKNCLKEKILKLVDIY 117
ELE + FL +RF+ S + AADSWL +MDRLLTLG+ECA EK CL +K+LKL D+Y
Sbjct: 740 ELETELFDLFLESRFHPSIAKCAAADSWLVYMDRLLTLGDECAEEKGCLHQKMLKLADLY 799
Query: 116 YDALDAPKTGKKVLVPDELRAEKFPHFMERTNSYHSKS 3
Y+A+DAPK+GKKV VP +L+ E++PHFMERT Y S S
Sbjct: 800 YEAVDAPKSGKKVEVPKDLKPERYPHFMERTYQYTSTS 837
>gb|AHL27588.1| RNA-dependent RNA polymerase 5 [Salvia miltiorrhiza]
Length = 898
Score = 123 bits (308), Expect = 3e-26
Identities = 63/101 (62%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Frame = -1
Query: 299 AELEDRILQKFLTTRFNQSNSIGVAADSWLSFMDRLLTLGNECAMEKNCLKEKILKLVDI 120
+ELE + Q FL +R S ++G AADSWL++MDRLLTLG++ A EKN LK K++KLVDI
Sbjct: 743 SELERELFQLFLDSR-TPSYNMGTAADSWLTYMDRLLTLGDDRAAEKNSLKTKMIKLVDI 801
Query: 119 YYDALDAPKTGKKVLVPDELRAEKFPHFMERT--NSYHSKS 3
YYDALDAPK+GKK+ VPD+L+AE FPH ME+ SYHS S
Sbjct: 802 YYDALDAPKSGKKINVPDDLKAELFPHHMEKAIEKSYHSSS 842
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 119 bits (299), Expect = 3e-25
Identities = 58/98 (59%), Positives = 74/98 (75%)
Frame = -1
Query: 296 ELEDRILQKFLTTRFNQSNSIGVAADSWLSFMDRLLTLGNECAMEKNCLKEKILKLVDIY 117
ELE+ + + FL F+ SN IG+AADSWL+ MDRLL LG+E A EK +K+K+LKL+DIY
Sbjct: 732 ELEEELFEMFLKAGFHASNVIGIAADSWLTIMDRLLILGDERAEEKAEMKKKMLKLIDIY 791
Query: 116 YDALDAPKTGKKVLVPDELRAEKFPHFMERTNSYHSKS 3
YDALDAPK G KV +P+ELR + FPH+MER + S S
Sbjct: 792 YDALDAPKKGDKVYLPNELRPDIFPHYMEREKKFKSTS 829
>ref|XP_006296906.1| hypothetical protein CARUB_v10012898mg [Capsella rubella]
gi|482565615|gb|EOA29804.1| hypothetical protein
CARUB_v10012898mg [Capsella rubella]
Length = 982
Score = 116 bits (291), Expect = 3e-24
Identities = 56/98 (57%), Positives = 73/98 (74%)
Frame = -1
Query: 296 ELEDRILQKFLTTRFNQSNSIGVAADSWLSFMDRLLTLGNECAMEKNCLKEKILKLVDIY 117
ELE+ + + FL F+ SN IG+AADSWL+ MDR L LG+E A EK +K+K+L+L+DIY
Sbjct: 735 ELEEELFEMFLKAGFHASNVIGMAADSWLTIMDRFLILGDESADEKAEMKQKMLELIDIY 794
Query: 116 YDALDAPKTGKKVLVPDELRAEKFPHFMERTNSYHSKS 3
YDALDAPK G KV +P+ELR + FPH+MER + S S
Sbjct: 795 YDALDAPKKGAKVYLPNELRPDIFPHYMERDKKFKSTS 832
>ref|NP_179583.3| probable RNA-dependent RNA polymerase 5 [Arabidopsis thaliana]
gi|322967572|sp|O82188.2|RDR5_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 5;
Short=AtRDRP5; AltName: Full=RNA-directed RNA polymerase
5 gi|330251850|gb|AEC06944.1| probable RNA-dependent RNA
polymerase 5 [Arabidopsis thaliana]
Length = 977
Score = 115 bits (288), Expect = 6e-24
Identities = 54/98 (55%), Positives = 74/98 (75%)
Frame = -1
Query: 296 ELEDRILQKFLTTRFNQSNSIGVAADSWLSFMDRLLTLGNECAMEKNCLKEKILKLVDIY 117
ELE+ + + FLT F+ SN IG+AADSWL+ MDR L LG++ A EK +K+K+L+L+DIY
Sbjct: 728 ELEEELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIY 787
Query: 116 YDALDAPKTGKKVLVPDELRAEKFPHFMERTNSYHSKS 3
YDALDAPK G KV +P++L+ + FPH+MER + S S
Sbjct: 788 YDALDAPKKGDKVYLPNKLKPDIFPHYMERDKKFQSTS 825
>dbj|BAF01243.1| hypothetical protein [Arabidopsis thaliana]
Length = 339
Score = 115 bits (288), Expect = 6e-24
Identities = 54/98 (55%), Positives = 74/98 (75%)
Frame = -1
Query: 296 ELEDRILQKFLTTRFNQSNSIGVAADSWLSFMDRLLTLGNECAMEKNCLKEKILKLVDIY 117
ELE+ + + FLT F+ SN IG+AADSWL+ MDR L LG++ A EK +K+K+L+L+DIY
Sbjct: 90 ELEEELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIY 149
Query: 116 YDALDAPKTGKKVLVPDELRAEKFPHFMERTNSYHSKS 3
YDALDAPK G KV +P++L+ + FPH+MER + S S
Sbjct: 150 YDALDAPKKGDKVYLPNKLKPDIFPHYMERDKKFQSTS 187
>gb|AAC62123.1| hypothetical protein [Arabidopsis thaliana]
Length = 929
Score = 115 bits (288), Expect = 6e-24
Identities = 54/98 (55%), Positives = 74/98 (75%)
Frame = -1
Query: 296 ELEDRILQKFLTTRFNQSNSIGVAADSWLSFMDRLLTLGNECAMEKNCLKEKILKLVDIY 117
ELE+ + + FLT F+ SN IG+AADSWL+ MDR L LG++ A EK +K+K+L+L+DIY
Sbjct: 648 ELEEELFEMFLTAGFHASNVIGIAADSWLTIMDRFLILGDDRAEEKAEMKKKMLELIDIY 707
Query: 116 YDALDAPKTGKKVLVPDELRAEKFPHFMERTNSYHSKS 3
YDALDAPK G KV +P++L+ + FPH+MER + S S
Sbjct: 708 YDALDAPKKGDKVYLPNKLKPDIFPHYMERDKKFQSTS 745
>ref|XP_006408908.1| hypothetical protein EUTSA_v10001897mg [Eutrema salsugineum]
gi|557110064|gb|ESQ50361.1| hypothetical protein
EUTSA_v10001897mg [Eutrema salsugineum]
Length = 988
Score = 114 bits (285), Expect = 1e-23
Identities = 56/98 (57%), Positives = 70/98 (71%)
Frame = -1
Query: 296 ELEDRILQKFLTTRFNQSNSIGVAADSWLSFMDRLLTLGNECAMEKNCLKEKILKLVDIY 117
ELE+ + FL RF+ SN IG+AADSWL+ MDR LTLG+E A EK +K K+L L+DIY
Sbjct: 740 ELEEELFDMFLKARFHSSNVIGMAADSWLTIMDRFLTLGDERAEEKAEMKRKMLSLIDIY 799
Query: 116 YDALDAPKTGKKVLVPDELRAEKFPHFMERTNSYHSKS 3
YDALDA K G KV +PD L+ + FPH+MER + S S
Sbjct: 800 YDALDAAKKGVKVSLPDALKPDIFPHYMERDKKFKSTS 837
>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334280|gb|ERP58267.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 877
Score = 113 bits (283), Expect = 2e-23
Identities = 58/101 (57%), Positives = 74/101 (73%), Gaps = 3/101 (2%)
Frame = -1
Query: 296 ELEDRILQKFLTTRFNQSNSIGVAADSWLSFMDRLLTLGNECAMEKNCLKEKILKLVDIY 117
ELE + + FL RF S+++GVAADSWL+ MDRLLTLGN+CA E C+KE I L+DIY
Sbjct: 625 ELEVELFKLFLRNRFQPSSTVGVAADSWLAMMDRLLTLGNDCAEEIVCMKENINLLIDIY 684
Query: 116 YDALDAPKT-GKKVLVPDELRAEKFPHFMERT--NSYHSKS 3
YDALDAPK G+++ VP+ L+AE FPHFM + +Y S S
Sbjct: 685 YDALDAPKKGGRRIEVPEGLKAELFPHFMGKNEKKTYRSTS 725
>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334279|gb|ERP58266.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 899
Score = 113 bits (283), Expect = 2e-23
Identities = 58/101 (57%), Positives = 74/101 (73%), Gaps = 3/101 (2%)
Frame = -1
Query: 296 ELEDRILQKFLTTRFNQSNSIGVAADSWLSFMDRLLTLGNECAMEKNCLKEKILKLVDIY 117
ELE + + FL RF S+++GVAADSWL+ MDRLLTLGN+CA E C+KE I L+DIY
Sbjct: 647 ELEVELFKLFLRNRFQPSSTVGVAADSWLAMMDRLLTLGNDCAEEIVCMKENINLLIDIY 706
Query: 116 YDALDAPKT-GKKVLVPDELRAEKFPHFMERT--NSYHSKS 3
YDALDAPK G+++ VP+ L+AE FPHFM + +Y S S
Sbjct: 707 YDALDAPKKGGRRIEVPEGLKAELFPHFMGKNEKKTYRSTS 747
>gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Mimulus guttatus]
Length = 878
Score = 112 bits (281), Expect = 4e-23
Identities = 59/100 (59%), Positives = 75/100 (75%), Gaps = 2/100 (2%)
Frame = -1
Query: 296 ELEDRILQKFLTTRFNQSNSIGVAADSWLSFMDRLLTLGNECAMEKNCLKEKILKLVDIY 117
ELE+ + Q L R S ++ AADSWL+FMDRLLTLG++ EK L +K+++LVDIY
Sbjct: 620 ELENELFQLCLEAR-TPSFNMATAADSWLTFMDRLLTLGDDRTAEKKSLMKKMIRLVDIY 678
Query: 116 YDALDAPKTGKKVLVPDELRAEKFPHFMERTN--SYHSKS 3
YDALDAPK+GKKV VP+ELRAE +PH ME+ + SYHS S
Sbjct: 679 YDALDAPKSGKKVKVPEELRAEMYPHHMEKGSELSYHSSS 718
>ref|XP_006381765.1| hypothetical protein POPTR_0006s17780g [Populus trichocarpa]
gi|550336519|gb|ERP59562.1| hypothetical protein
POPTR_0006s17780g [Populus trichocarpa]
Length = 866
Score = 112 bits (281), Expect = 4e-23
Identities = 58/101 (57%), Positives = 73/101 (72%), Gaps = 3/101 (2%)
Frame = -1
Query: 296 ELEDRILQKFLTTRFNQSNSIGVAADSWLSFMDRLLTLGNECAMEKNCLKEKILKLVDIY 117
ELE + + FL RF S ++GVAADSWL+ MDRLLTLGN+C E C+K+ I L+DIY
Sbjct: 625 ELEVELFKLFLRNRFQPSFTVGVAADSWLAMMDRLLTLGNDCTEEIACVKKNINLLIDIY 684
Query: 116 YDALDAPKT-GKKVLVPDELRAEKFPHFMER--TNSYHSKS 3
YDALDAPK G+K+ VP+ L+AE FPHFME+ +Y S S
Sbjct: 685 YDALDAPKKGGRKIEVPEALKAELFPHFMEKHEKKTYRSTS 725
>ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prunus persica]
gi|462399806|gb|EMJ05474.1| hypothetical protein
PRUPE_ppa001584mg [Prunus persica]
Length = 798
Score = 111 bits (277), Expect = 1e-22
Identities = 53/97 (54%), Positives = 71/97 (73%)
Frame = -1
Query: 293 LEDRILQKFLTTRFNQSNSIGVAADSWLSFMDRLLTLGNECAMEKNCLKEKILKLVDIYY 114
+ED +++ FL TRF S ++ A+DSWL+ MDRLL LG+ EK +K +L+LVD+YY
Sbjct: 548 IEDALIKLFLKTRFEPSFAMSEASDSWLAMMDRLLILGDSSNSEKTHVKANMLRLVDLYY 607
Query: 113 DALDAPKTGKKVLVPDELRAEKFPHFMERTNSYHSKS 3
+ALDAPK G KV+VP EL++ FPH+MER NSY S S
Sbjct: 608 EALDAPKKGGKVVVPGELKSNLFPHYMERVNSYKSTS 644
>gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus notabilis]
Length = 521
Score = 110 bits (275), Expect = 2e-22
Identities = 55/117 (47%), Positives = 74/117 (63%), Gaps = 19/117 (16%)
Frame = -1
Query: 296 ELEDRILQKFLTTRFNQSNSIGVAADSWLSFMDRLLTLGNECAMEKNCLKEKILKLVDIY 117
ELED +++ FLT RF S + A++ WL+ MDR LTLG++C EKN +K+ + +LVDIY
Sbjct: 252 ELEDELIKLFLTVRFKPSFAKSEASEGWLALMDRFLTLGDDCVAEKNAVKDNLFELVDIY 311
Query: 116 YDALDAPKTGKK-------------------VLVPDELRAEKFPHFMERTNSYHSKS 3
YDALDAPK G K V VP EL+ +FPH+ME+ NS+HS+S
Sbjct: 312 YDALDAPKQGGKQQDLAKFFEAYAALELSFQVEVPRELKPNRFPHYMEKQNSFHSRS 368
>gb|EMT22628.1| hypothetical protein F775_22922 [Aegilops tauschii]
Length = 460
Score = 110 bits (275), Expect = 2e-22
Identities = 56/97 (57%), Positives = 71/97 (73%)
Frame = -1
Query: 293 LEDRILQKFLTTRFNQSNSIGVAADSWLSFMDRLLTLGNECAMEKNCLKEKILKLVDIYY 114
LE + +FL RF +SN++G AAD+WL +MDRLLT G + E N L++KI KLVDIYY
Sbjct: 178 LERSLFHEFLKARFARSNALGAAADTWLVYMDRLLTDGVD-EYESNILEKKIKKLVDIYY 236
Query: 113 DALDAPKTGKKVLVPDELRAEKFPHFMERTNSYHSKS 3
ALDAPK G K+ VP EL A+K+PH+M+R SYHS S
Sbjct: 237 LALDAPKAGTKINVPAELTAKKYPHYMDRKESYHSTS 273
>ref|NP_179582.2| RNA-dependent RNA polymerase family protein [Arabidopsis thaliana]
gi|322967571|sp|O82189.2|RDR4_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 4;
Short=AtRDRP4; AltName: Full=RNA-directed RNA polymerase
4 gi|330251849|gb|AEC06943.1| RNA-dependent RNA
polymerase family protein [Arabidopsis thaliana]
Length = 927
Score = 109 bits (272), Expect = 5e-22
Identities = 52/98 (53%), Positives = 73/98 (74%)
Frame = -1
Query: 296 ELEDRILQKFLTTRFNQSNSIGVAADSWLSFMDRLLTLGNECAMEKNCLKEKILKLVDIY 117
+LE+ + + FL T F+ S+ IG AADSWL+ MDR LTLG+E EK +K+K+LKL DIY
Sbjct: 728 QLEEELFKIFLKTGFSPSSVIGQAADSWLAIMDRFLTLGDENVKEKAEMKKKMLKLTDIY 787
Query: 116 YDALDAPKTGKKVLVPDELRAEKFPHFMERTNSYHSKS 3
YDA+DAPKTG +V +P +++ + FPH+MER ++ S S
Sbjct: 788 YDAIDAPKTGTEVNLPLDVKVDLFPHYMERNKTFKSTS 825
>ref|NP_001042303.1| Os01g0197900 [Oryza sativa Japonica Group]
gi|56201770|dbj|BAD73220.1| unknown protein [Oryza
sativa Japonica Group] gi|56201877|dbj|BAD73327.1|
unknown protein [Oryza sativa Japonica Group]
gi|113531834|dbj|BAF04217.1| Os01g0197900 [Oryza sativa
Japonica Group]
Length = 387
Score = 109 bits (272), Expect = 5e-22
Identities = 54/99 (54%), Positives = 74/99 (74%)
Frame = -1
Query: 299 AELEDRILQKFLTTRFNQSNSIGVAADSWLSFMDRLLTLGNECAMEKNCLKEKILKLVDI 120
++LE + +FL TRF S ++G AADSWL++MDRLLT + +EK ++EK+LKLVD+
Sbjct: 126 SKLERLLFHEFLKTRFTPSFALGTAADSWLAYMDRLLTDSLD-EIEKKLIEEKMLKLVDL 184
Query: 119 YYDALDAPKTGKKVLVPDELRAEKFPHFMERTNSYHSKS 3
YY ALDAPKTG KV +P +L +++PHFM R+ SYHS S
Sbjct: 185 YYLALDAPKTGNKVNIPSDLMVKQYPHFMGRSFSYHSSS 223