BLASTX nr result

ID: Cocculus22_contig00025633 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00025633
         (276 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006478490.1| PREDICTED: F-box/ankyrin repeat protein SKIP...    67   3e-09
ref|XP_006441987.1| hypothetical protein CICLE_v10019310mg [Citr...    67   3e-09
ref|XP_002276275.1| PREDICTED: F-box/ankyrin repeat protein SKIP...    60   2e-07
ref|XP_006372306.1| hypothetical protein POPTR_0017s00410g [Popu...    60   3e-07
ref|XP_007203611.1| hypothetical protein PRUPE_ppa002867mg [Prun...    58   2e-06
emb|CBI24769.3| unnamed protein product [Vitis vinifera]               58   2e-06

>ref|XP_006478490.1| PREDICTED: F-box/ankyrin repeat protein SKIP35-like [Citrus
           sinensis]
          Length = 626

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
 Frame = -2

Query: 275 MERGTLLCGERDGLHLVNETSAEEGYMCASMEMDES--ATRSSNMMKLSHLTQEGSNVVF 102
           M +      + D ++L +    EE + CA ME DE+   T ++ +   +    EGSNVVF
Sbjct: 1   MVKERFFVSKNDNMYLEDGIDHEEPF-CAEMEADENETGTPANEVHGFTSEGSEGSNVVF 59

Query: 101 PTEAPLLSKEPRITGGCSCSAKKPKSRTSVA 9
             EAPL+SKE RI+ GCSCSAK  KSR  +A
Sbjct: 60  SREAPLISKESRISSGCSCSAKNLKSRRIIA 90


>ref|XP_006441987.1| hypothetical protein CICLE_v10019310mg [Citrus clementina]
           gi|567899000|ref|XP_006441988.1| hypothetical protein
           CICLE_v10019310mg [Citrus clementina]
           gi|557544249|gb|ESR55227.1| hypothetical protein
           CICLE_v10019310mg [Citrus clementina]
           gi|557544250|gb|ESR55228.1| hypothetical protein
           CICLE_v10019310mg [Citrus clementina]
          Length = 626

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
 Frame = -2

Query: 275 MERGTLLCGERDGLHLVNETSAEEGYMCASMEMDES--ATRSSNMMKLSHLTQEGSNVVF 102
           M +      + D ++L +    EE + CA ME DE+   T ++ +   +    EGSNVVF
Sbjct: 1   MVKERFFVSKNDNMYLEDGIDHEEPF-CAEMEADENETGTPANEVHGFTSEGSEGSNVVF 59

Query: 101 PTEAPLLSKEPRITGGCSCSAKKPKSRTSVA 9
             EAPL+SKE RI+ GCSCSAK  KSR  +A
Sbjct: 60  SREAPLISKESRISSGCSCSAKNLKSRRIIA 90


>ref|XP_002276275.1| PREDICTED: F-box/ankyrin repeat protein SKIP35-like [Vitis
           vinifera]
          Length = 674

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 38/92 (41%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
 Frame = -2

Query: 275 MERGTLLCGERDGLHLVNETSAEEGYMCASMEMDESATRSSN--MMKLSHLTQEGSNVVF 102
           ME   +     + LH  N T+ ++  +CA ME + +            S    EGSNVVF
Sbjct: 49  MEEEFISVAGSNNLHSGNGTNPKDP-LCAEMESNNNGIGHPKDASENFSSENGEGSNVVF 107

Query: 101 PTEAPLLSKEPRITGGCSCSAKKPKSRTSVAD 6
             EAPL+SK+ R +GGCSCS KK KSR  V D
Sbjct: 108 SREAPLVSKDSRTSGGCSCSPKKLKSRMVVTD 139


>ref|XP_006372306.1| hypothetical protein POPTR_0017s00410g [Populus trichocarpa]
           gi|566210438|ref|XP_006372307.1| hypothetical protein
           POPTR_0017s00410g [Populus trichocarpa]
           gi|550318920|gb|ERP50103.1| hypothetical protein
           POPTR_0017s00410g [Populus trichocarpa]
           gi|550318921|gb|ERP50104.1| hypothetical protein
           POPTR_0017s00410g [Populus trichocarpa]
          Length = 625

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 37/78 (47%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
 Frame = -2

Query: 248 ERDGLHLVNETSAEEGYMCASMEMDESATRS--SNMMKLSHLTQEGSNVVFPTEAPLLSK 75
           E   +HL +E   E+ +    ME +E+   S  S +   S  T EGSNVVF  EAPL+SK
Sbjct: 9   EGTDMHLEDEFCPEQSFS-VEMETEENEIGSPKSEIQCFSSETGEGSNVVFSREAPLISK 67

Query: 74  EPRITGGCSCSAKKPKSR 21
           E RI+G CSCS KK K R
Sbjct: 68  ETRISGVCSCSTKKLKPR 85


>ref|XP_007203611.1| hypothetical protein PRUPE_ppa002867mg [Prunus persica]
           gi|462399142|gb|EMJ04810.1| hypothetical protein
           PRUPE_ppa002867mg [Prunus persica]
          Length = 626

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
 Frame = -2

Query: 239 GLHLVNETSAEEGYMCASMEMDESATRSSN--MMKLSHLTQEGSNVVFPTEAPLLSKEPR 66
           G  +VNET++E+      ME +ES     N  +  L+    EGSNVVF  E PL+ KE R
Sbjct: 13  GWIVVNETNSEDPTYI-EMEAEESGIDCPNNGVQGLASDKGEGSNVVFSREGPLVRKESR 71

Query: 65  ITGGCSCSAKKPKSRTSVAD 6
           ++  CSCSAKK KS+ +V D
Sbjct: 72  MSTNCSCSAKKLKSQAAVVD 91


>emb|CBI24769.3| unnamed protein product [Vitis vinifera]
          Length = 969

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 36/87 (41%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
 Frame = -2

Query: 275 MERGTLLCGERDGLHLVNETSAEEGYMCASMEMDESATRSSN--MMKLSHLTQEGSNVVF 102
           ME   +     + LH  N T+ ++  +CA ME + +            S    EGSNVVF
Sbjct: 356 MEEEFISVAGSNNLHSGNGTNPKDP-LCAEMESNNNGIGHPKDASENFSSENGEGSNVVF 414

Query: 101 PTEAPLLSKEPRITGGCSCSAKKPKSR 21
             EAPL+SK+ R +GGCSCS KK KSR
Sbjct: 415 SREAPLVSKDSRTSGGCSCSPKKLKSR 441


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