BLASTX nr result

ID: Cocculus22_contig00025625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00025625
         (331 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23243.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002268884.1| PREDICTED: tRNA wybutosine-synthesizing prot...    57   2e-06

>emb|CBI23243.3| unnamed protein product [Vitis vinifera]
          Length = 1013

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
 Frame = +1

Query: 16  VMVSKEYVRFLVGIANEKMELNRRRTECFNQVLES-----KLVGNRVLDDNEVGEDHQ-G 177
           V+VS EYVR+LVGIAN+KME NRRRTE F Q L+S        G   LD    G++H   
Sbjct: 169 VLVSPEYVRYLVGIANDKMETNRRRTEGFLQALQSSGFVESFNGGAGLDGAMGGDEHGCS 228

Query: 178 DCFXXXXXXXXXXXXRLVVGECDSEKAEVDAHLG-LGAHHCSISVTKL 318
           DC                 G+ +SE+   +   G +G   CS+S+ ++
Sbjct: 229 DCKD---------------GDANSERIIAEKESGSVGVLGCSLSIVQM 261


>ref|XP_002268884.1| PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4-like [Vitis
           vinifera]
          Length = 1018

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 41/108 (37%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
 Frame = +1

Query: 16  VMVSKEYVRFLVGIANEKMELNRRRTECFNQVLES-----KLVGNRVLDDNEVGEDHQ-G 177
           V+VS EYVR+LVGIAN+KME NRRRTE F Q L+S        G   LD    G++H   
Sbjct: 169 VLVSPEYVRYLVGIANDKMETNRRRTEGFLQALQSSGFVESFNGGAGLDGAMGGDEHGCS 228

Query: 178 DCFXXXXXXXXXXXXRLVVGECDSEKAEVDAHLG-LGAHHCSISVTKL 318
           DC                 G+ +SE+   +   G +G   CS+S+ ++
Sbjct: 229 DCKD---------------GDANSERIIAEKESGSVGVLGCSLSIVQM 261


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