BLASTX nr result
ID: Cocculus22_contig00025551
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00025551
(328 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262... 91 1e-16
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera... 91 2e-16
ref|XP_007048434.1| Transcription elongation factor (TFIIS) fami... 86 4e-15
ref|XP_004288319.1| PREDICTED: probable mediator of RNA polymera... 86 5e-15
ref|XP_003602530.1| hypothetical protein MTR_3g095380 [Medicago ... 86 5e-15
ref|XP_007137683.1| hypothetical protein PHAVU_009G146900g [Phas... 85 1e-14
ref|XP_004502892.1| PREDICTED: probable mediator of RNA polymera... 84 2e-14
ref|XP_002530078.1| conserved hypothetical protein [Ricinus comm... 84 2e-14
emb|CBI37628.3| unnamed protein product [Vitis vinifera] 84 2e-14
ref|XP_006581749.1| PREDICTED: probable mediator of RNA polymera... 83 4e-14
ref|XP_006581748.1| PREDICTED: probable mediator of RNA polymera... 83 5e-14
ref|XP_007205514.1| hypothetical protein PRUPE_ppa008362mg [Prun... 83 5e-14
ref|XP_003526847.1| PREDICTED: probable mediator of RNA polymera... 82 8e-14
ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260... 82 1e-13
gb|EXB36907.1| hypothetical protein L484_016512 [Morus notabilis] 81 2e-13
ref|XP_006351014.1| PREDICTED: probable mediator of RNA polymera... 80 4e-13
ref|XP_004249876.1| PREDICTED: probable mediator of RNA polymera... 80 4e-13
ref|XP_006370923.1| hypothetical protein POPTR_0019s01790g [Popu... 79 9e-13
ref|XP_006578813.1| PREDICTED: probable mediator of RNA polymera... 76 6e-12
ref|XP_003523244.1| PREDICTED: probable mediator of RNA polymera... 76 6e-12
>ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
gi|296081186|emb|CBI18212.3| unnamed protein product
[Vitis vinifera]
Length = 332
Score = 91.3 bits (225), Expect = 1e-16
Identities = 46/72 (63%), Positives = 49/72 (68%)
Frame = +1
Query: 112 SMVAADGDSPLQNPQKSNQNGHHLVPDFTFSPNPHNGSSGSDKNTAEPEPKGKMVIRRVP 291
S + ADGDSP QN KS N HH VPDF +SPNPHNGSSGSDKN E EPK K V RR
Sbjct: 190 SAIVADGDSPQQNHLKSTSNVHHQVPDFAYSPNPHNGSSGSDKNNVELEPKRKAVPRRET 249
Query: 292 PQPKPAQSIPTP 327
P KP Q+ P P
Sbjct: 250 PN-KPNQTPPIP 260
>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Cucumis sativus]
gi|449528150|ref|XP_004171069.1| PREDICTED: probable
mediator of RNA polymerase II transcription subunit
26c-like [Cucumis sativus]
Length = 345
Score = 90.5 bits (223), Expect = 2e-16
Identities = 45/78 (57%), Positives = 54/78 (69%)
Frame = +1
Query: 91 NNLTKRVSMVAADGDSPLQNPQKSNQNGHHLVPDFTFSPNPHNGSSGSDKNTAEPEPKGK 270
N ++ + + ADGDSP QK+ QNG+H VPDF +SPNPHNG SGSD+N +EPEPKGK
Sbjct: 195 NQPGEQTATLLADGDSP---QQKAPQNGYHQVPDFAYSPNPHNGGSGSDRNNSEPEPKGK 251
Query: 271 MVIRRVPPQPKPAQSIPT 324
V RR PKP Q PT
Sbjct: 252 SVPRR-DALPKPTQQAPT 268
>ref|XP_007048434.1| Transcription elongation factor (TFIIS) family protein, putative
isoform 1 [Theobroma cacao]
gi|590709002|ref|XP_007048435.1| Transcription
elongation factor (TFIIS) family protein, putative
isoform 1 [Theobroma cacao] gi|508700695|gb|EOX92591.1|
Transcription elongation factor (TFIIS) family protein,
putative isoform 1 [Theobroma cacao]
gi|508700696|gb|EOX92592.1| Transcription elongation
factor (TFIIS) family protein, putative isoform 1
[Theobroma cacao]
Length = 336
Score = 86.3 bits (212), Expect = 4e-15
Identities = 42/70 (60%), Positives = 48/70 (68%)
Frame = +1
Query: 112 SMVAADGDSPLQNPQKSNQNGHHLVPDFTFSPNPHNGSSGSDKNTAEPEPKGKMVIRRVP 291
S + ADGDSP + P QNG+H VPDF +SPNPHNGSSGSDKN +EPE K K + R
Sbjct: 199 SALMADGDSPQRKPP---QNGYHQVPDFAYSPNPHNGSSGSDKNNSEPERKPKPIPPRNE 255
Query: 292 PQPKPAQSIP 321
P PKP S P
Sbjct: 256 PPPKPTYSAP 265
>ref|XP_004288319.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Fragaria vesca subsp. vesca]
Length = 344
Score = 85.9 bits (211), Expect = 5e-15
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = +1
Query: 118 VAADGDSPLQNPQKSNQNGHHLVPDFTFSPNPHNGSSGSDKNTAEPEPKGKMVIRRVPPQ 297
V DGDSP QK +QNGHH VPDF +SPNPHNGSSGSDKN +EPE K K++ +R P
Sbjct: 202 VMVDGDSP---QQKIHQNGHHQVPDFGYSPNPHNGSSGSDKNNSEPERKPKIIPKREVP- 257
Query: 298 PKPAQSI 318
P+P QS+
Sbjct: 258 PRPTQSV 264
>ref|XP_003602530.1| hypothetical protein MTR_3g095380 [Medicago truncatula]
gi|355491578|gb|AES72781.1| hypothetical protein
MTR_3g095380 [Medicago truncatula]
Length = 357
Score = 85.9 bits (211), Expect = 5e-15
Identities = 49/104 (47%), Positives = 68/104 (65%), Gaps = 4/104 (3%)
Frame = +1
Query: 28 LLSLVLKNNFRFLENSIKVICNNLTKRVSMVAADGDSPLQNPQKSNQNGH-HLVPDFTFS 204
L+ L++K +++ +K N + S + ADGDSPLQ K+ NGH H +PDF +S
Sbjct: 183 LVKLLVKKWKEIVDDWVK---QNPQRGKSTLMADGDSPLQ---KTTPNGHNHQIPDFAYS 236
Query: 205 PNPHNGSSGSDKNT--AEPEPKGKMVIRR-VPPQPKPAQSIPTP 327
PNPHNGSSGSD+NT AEP+PK K V R+ PP+P+P+ + P
Sbjct: 237 PNPHNGSSGSDRNTSEAEPKPKPKSVPRKDPPPKPRPSPPVTAP 280
>ref|XP_007137683.1| hypothetical protein PHAVU_009G146900g [Phaseolus vulgaris]
gi|561010770|gb|ESW09677.1| hypothetical protein
PHAVU_009G146900g [Phaseolus vulgaris]
Length = 353
Score = 84.7 bits (208), Expect = 1e-14
Identities = 43/70 (61%), Positives = 52/70 (74%), Gaps = 2/70 (2%)
Frame = +1
Query: 124 ADGDSPLQNPQKSNQNGHH-LVPDFTFSPNPHNGSSGSDKNTAEPEPKGKMVIRRVP-PQ 297
ADGDSP+Q K+ QNGHH +PDF +SPNPHNGSSGSD+N +E E K K++ R P P+
Sbjct: 214 ADGDSPVQ---KTTQNGHHHQIPDFAYSPNPHNGSSGSDRNNSEAEHKPKVIPRSEPRPK 270
Query: 298 PKPAQSIPTP 327
P PA SI TP
Sbjct: 271 PTPAPSISTP 280
>ref|XP_004502892.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Cicer arietinum]
Length = 356
Score = 84.3 bits (207), Expect = 2e-14
Identities = 45/73 (61%), Positives = 53/73 (72%), Gaps = 6/73 (8%)
Frame = +1
Query: 124 ADGDSPLQNPQKSNQNGHH-LVPDFTFSPNPHNGSSGSDKNT--AEPEPKGKMVIRRVPP 294
ADGDSPLQ K+NQNGHH +PDF +SPNPHNGSSGSD+N AEP+PK K V R+ PP
Sbjct: 211 ADGDSPLQ---KTNQNGHHHQIPDFAYSPNPHNGSSGSDRNNSEAEPKPKPKPVPRKEPP 267
Query: 295 ---QPKPAQSIPT 324
+P P + PT
Sbjct: 268 PKLKPSPPVTAPT 280
>ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
gi|223530431|gb|EEF32318.1| conserved hypothetical
protein [Ricinus communis]
Length = 362
Score = 84.0 bits (206), Expect = 2e-14
Identities = 45/71 (63%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
Frame = +1
Query: 112 SMVAADGDSPLQNPQKSNQNGHHLVPDFTFSPNPHNGSSGSDKNTAEPEPKGKMVIRRVP 291
S + ADGDSP Q K QNGHH VPDF +SPNPHNGSSGSDKN +EPE + K V R+
Sbjct: 216 SGLMADGDSPRQ---KFPQNGHHQVPDFAYSPNPHNGSSGSDKNNSEPERRPKPVPRKEA 272
Query: 292 PQPKPA-QSIP 321
P P+PA QS+P
Sbjct: 273 P-PRPAQQSVP 282
>emb|CBI37628.3| unnamed protein product [Vitis vinifera]
Length = 332
Score = 84.0 bits (206), Expect = 2e-14
Identities = 43/70 (61%), Positives = 50/70 (71%)
Frame = +1
Query: 112 SMVAADGDSPLQNPQKSNQNGHHLVPDFTFSPNPHNGSSGSDKNTAEPEPKGKMVIRRVP 291
S + A+GDSP PQK + GHH VPDF +SPNP NGSSGSDKN AEPEPK K + R+
Sbjct: 195 SALMAEGDSP---PQKIPRTGHHQVPDFGYSPNPQNGSSGSDKNNAEPEPKVKAIPRKEV 251
Query: 292 PQPKPAQSIP 321
P +PAQS P
Sbjct: 252 P-TRPAQSAP 260
>ref|XP_006581749.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X3 [Glycine max]
Length = 359
Score = 83.2 bits (204), Expect = 4e-14
Identities = 47/103 (45%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
Frame = +1
Query: 28 LLSLVLKNNFRFLENSIKVICNNLTKRVSMVAADGDSPLQNPQKSNQNGHH--LVPDFTF 201
L+ L+++ ++ +K+ N R + + ADGDSP QK+ QNGHH +PDF +
Sbjct: 185 LVKLLVRKWKEIVDEWVKL---NPQGRSNTLMADGDSP--PVQKTTQNGHHHQQIPDFAY 239
Query: 202 SPNPHNGSSGSDKNTAEPEPKGKMVIRRVP-PQPKPAQSIPTP 327
SPNPHNGSSGSD+N +E E K K+V R P P+P P+ S+ TP
Sbjct: 240 SPNPHNGSSGSDRNNSEAEHKPKVVPRSEPRPKPAPSPSVSTP 282
>ref|XP_006581748.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X2 [Glycine max]
Length = 360
Score = 82.8 bits (203), Expect = 5e-14
Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
Frame = +1
Query: 28 LLSLVLKNNFRFLENSIKVICNNLTKRVSMVAADGDSPLQNPQKSNQNGHH---LVPDFT 198
L+ L+++ ++ +K+ N R + + ADGDSP QK+ QNGHH +PDF
Sbjct: 185 LVKLLVRKWKEIVDEWVKL---NPQGRSNTLMADGDSP--PVQKTTQNGHHHQQQIPDFA 239
Query: 199 FSPNPHNGSSGSDKNTAEPEPKGKMVIRRVP-PQPKPAQSIPTP 327
+SPNPHNGSSGSD+N +E E K K+V R P P+P P+ S+ TP
Sbjct: 240 YSPNPHNGSSGSDRNNSEAEHKPKVVPRSEPRPKPAPSPSVSTP 283
>ref|XP_007205514.1| hypothetical protein PRUPE_ppa008362mg [Prunus persica]
gi|462401156|gb|EMJ06713.1| hypothetical protein
PRUPE_ppa008362mg [Prunus persica]
Length = 335
Score = 82.8 bits (203), Expect = 5e-14
Identities = 45/70 (64%), Positives = 47/70 (67%)
Frame = +1
Query: 112 SMVAADGDSPLQNPQKSNQNGHHLVPDFTFSPNPHNGSSGSDKNTAEPEPKGKMVIRRVP 291
S D DSP QK QNG H VPDF +SPNPHNGSSGSDKN +EPE K K V RR
Sbjct: 191 SSAMVDEDSP---QQKIPQNGLHQVPDFAYSPNPHNGSSGSDKNNSEPERKPKAVPRREA 247
Query: 292 PQPKPAQSIP 321
P PKPAQS P
Sbjct: 248 P-PKPAQSTP 256
>ref|XP_003526847.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X1 [Glycine max]
Length = 361
Score = 82.0 bits (201), Expect = 8e-14
Identities = 47/105 (44%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Frame = +1
Query: 28 LLSLVLKNNFRFLENSIKVICNNLTKRVSMVAADGDSPLQNPQKSNQNGHHL----VPDF 195
L+ L+++ ++ +K+ N R + + ADGDSP QK+ QNGHH +PDF
Sbjct: 185 LVKLLVRKWKEIVDEWVKL---NPQGRSNTLMADGDSP--PVQKTTQNGHHHQQVEIPDF 239
Query: 196 TFSPNPHNGSSGSDKNTAEPEPKGKMVIRRVP-PQPKPAQSIPTP 327
+SPNPHNGSSGSD+N +E E K K+V R P P+P P+ S+ TP
Sbjct: 240 AYSPNPHNGSSGSDRNNSEAEHKPKVVPRSEPRPKPAPSPSVSTP 284
>ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260896 isoform 1 [Vitis
vinifera]
Length = 331
Score = 81.6 bits (200), Expect = 1e-13
Identities = 42/70 (60%), Positives = 48/70 (68%)
Frame = +1
Query: 112 SMVAADGDSPLQNPQKSNQNGHHLVPDFTFSPNPHNGSSGSDKNTAEPEPKGKMVIRRVP 291
S +GDSP PQK + GHH VPDF +SPNP NGSSGSDKN AEPEPK K + R+
Sbjct: 194 SSALMEGDSP---PQKIPRTGHHQVPDFGYSPNPQNGSSGSDKNNAEPEPKVKAIPRKEV 250
Query: 292 PQPKPAQSIP 321
P +PAQS P
Sbjct: 251 P-TRPAQSAP 259
>gb|EXB36907.1| hypothetical protein L484_016512 [Morus notabilis]
Length = 418
Score = 80.9 bits (198), Expect = 2e-13
Identities = 42/66 (63%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +1
Query: 127 DGDSPLQNPQKSNQNGHHLVPDFTFSPNPHNGSSGSDKNTAEPEPKGKMVIRRVPPQPKP 306
DGDSP QK QNGHH VPDF +SPNPHNGSSGSDKN +EPE K K V R PKP
Sbjct: 200 DGDSP---QQKIPQNGHHQVPDFAYSPNPHNGSSGSDKNNSEPEQKPKAVPSRREALPKP 256
Query: 307 AQ-SIP 321
S+P
Sbjct: 257 MNPSVP 262
>ref|XP_006351014.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Solanum tuberosum]
Length = 348
Score = 79.7 bits (195), Expect = 4e-13
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = +1
Query: 112 SMVAADGDSPLQNPQKSNQNGHHLVPDFTFSPNPHNGSSGSDKNTAEPEPKGKMVIRRVP 291
+++AAD DSP Q+ +++ QNG+H VPDF +SPNP NGSS SD+N +E E K K V +R
Sbjct: 204 NLIAADDDSPQQSVRRNQQNGNHQVPDFAYSPNPRNGSSSSDRNNSESEYKPKPVPQRNV 263
Query: 292 PQPKPAQSIPTP 327
+P QS P P
Sbjct: 264 TPTRPLQSAPKP 275
>ref|XP_004249876.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like [Solanum lycopersicum]
Length = 349
Score = 79.7 bits (195), Expect = 4e-13
Identities = 37/72 (51%), Positives = 50/72 (69%)
Frame = +1
Query: 112 SMVAADGDSPLQNPQKSNQNGHHLVPDFTFSPNPHNGSSGSDKNTAEPEPKGKMVIRRVP 291
+++AAD DSP Q+ +++ QNG+H VPDF +SPNP NGSS SD+N +E E K K V +R
Sbjct: 204 NLIAADDDSPQQSVRRNQQNGNHQVPDFAYSPNPRNGSSSSDRNNSESEYKPKPVPQRNV 263
Query: 292 PQPKPAQSIPTP 327
+P QS P P
Sbjct: 264 TPTRPLQSAPKP 275
>ref|XP_006370923.1| hypothetical protein POPTR_0019s01790g [Populus trichocarpa]
gi|550316504|gb|ERP48720.1| hypothetical protein
POPTR_0019s01790g [Populus trichocarpa]
Length = 357
Score = 78.6 bits (192), Expect = 9e-13
Identities = 42/72 (58%), Positives = 46/72 (63%)
Frame = +1
Query: 112 SMVAADGDSPLQNPQKSNQNGHHLVPDFTFSPNPHNGSSGSDKNTAEPEPKGKMVIRRVP 291
S + ADGDSP QK QNGHH VPDF +SPNPHNGSSGSD+N +EPE K K R
Sbjct: 212 SGLMADGDSP---QQKIPQNGHHQVPDFAYSPNPHNGSSGSDRNNSEPERKPKPAPPRNQ 268
Query: 292 PQPKPAQSIPTP 327
KP Q P P
Sbjct: 269 APTKPTQK-PVP 279
>ref|XP_006578813.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X3 [Glycine max]
Length = 364
Score = 75.9 bits (185), Expect = 6e-12
Identities = 40/70 (57%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Frame = +1
Query: 124 ADGDSPLQNPQKSNQNGHHL-VPDFTFSPNPHNGSSGSDKNTAEPEPKGKMVIRRVP-PQ 297
ADGDS QK+ QNGHH +PDF +SPNPHNGSSGSD+N +E E K K+V R P P+
Sbjct: 213 ADGDS--SPVQKTTQNGHHQQIPDFAYSPNPHNGSSGSDRNNSEAERKPKVVPRSEPRPK 270
Query: 298 PKPAQSIPTP 327
P+ S+ TP
Sbjct: 271 HAPSPSVSTP 280
>ref|XP_003523244.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26c-like isoform X1 [Glycine max]
Length = 356
Score = 75.9 bits (185), Expect = 6e-12
Identities = 40/70 (57%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Frame = +1
Query: 124 ADGDSPLQNPQKSNQNGHHL-VPDFTFSPNPHNGSSGSDKNTAEPEPKGKMVIRRVP-PQ 297
ADGDS QK+ QNGHH +PDF +SPNPHNGSSGSD+N +E E K K+V R P P+
Sbjct: 213 ADGDS--SPVQKTTQNGHHQQIPDFAYSPNPHNGSSGSDRNNSEAERKPKVVPRSEPRPK 270
Query: 298 PKPAQSIPTP 327
P+ S+ TP
Sbjct: 271 HAPSPSVSTP 280