BLASTX nr result
ID: Cocculus22_contig00025493
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00025493
(422 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Tritic... 58 7e-12
gb|EMS61456.1| Protein HASTY 1 [Triticum urartu] 61 2e-11
gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu] 57 1e-10
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr... 59 6e-10
gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tausc... 55 9e-09
emb|CCH50976.1| T4.15 [Malus x robusta] 59 3e-08
gb|EMT12744.1| Exostosin-1 [Aegilops tauschii] 49 1e-06
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas... 50 1e-06
>gb|EMS56299.1| Polycomb group protein EMBRYONIC FLOWER 2 [Triticum urartu]
Length = 974
Score = 58.2 bits (139), Expect(3) = 7e-12
Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = +2
Query: 116 KFTSHTIKLWKRVIENXXXXXXXX*INQFGFMPRRSTMEAYFL-RRLIKRY 265
K SHT+KLW+RVIE+ NQFGFMP RSTMEA FL R+L+KRY
Sbjct: 30 KLMSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMKRY 80
Score = 30.8 bits (68), Expect(3) = 7e-12
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 312 AYD*VNKDII*WALC*KRVTNRYIDLIKDM 401
AYD + ++++ WAL +V +YI LIKDM
Sbjct: 97 AYDKIPRNVMWWALEKHKVPTKYITLIKDM 126
Score = 26.2 bits (56), Expect(3) = 7e-12
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 238 LSKKINKEV*GEKKDLNMTFIDLE 309
L +++ K +KKDL+M FIDLE
Sbjct: 72 LVRQLMKRYREQKKDLHMVFIDLE 95
>gb|EMS61456.1| Protein HASTY 1 [Triticum urartu]
Length = 955
Score = 60.8 bits (146), Expect(3) = 2e-11
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Frame = +2
Query: 11 KHKPTHKNKNQTKPVFVAQFGLVCRFGVNRCTPLE--KFTSHTIKLWKRVIENXXXXXXX 184
K P + ++ P+F + + V CT K TSHT KLW+RVIE+
Sbjct: 676 KQMPEERRRSILVPIFKS------KGDVQTCTDYRGIKLTSHTTKLWERVIEHRLRRMTS 729
Query: 185 X*INQFGFMPRRSTMEAYFL-RRLIKRY 265
NQFGFMP RSTMEA FL R+L++RY
Sbjct: 730 VTKNQFGFMPGRSTMEAIFLVRQLMERY 757
Score = 28.1 bits (61), Expect(3) = 2e-11
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +3
Query: 312 AYD*VNKDII*WALC*KRVTNRYIDLIKD 398
AYD + ++++ WAL +V +YI LIKD
Sbjct: 774 AYDKIPRNVMWWALEKHKVLAKYITLIKD 802
Score = 24.6 bits (52), Expect(3) = 2e-11
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +1
Query: 271 EKKDLNMTFIDLE 309
+KKDL+M FIDLE
Sbjct: 760 QKKDLHMLFIDLE 772
>gb|EMS59319.1| V-type proton ATPase subunit B 2 [Triticum urartu]
Length = 605
Score = 56.6 bits (135), Expect(3) = 1e-10
Identities = 30/51 (58%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = +2
Query: 116 KFTSHTIKLWKRVIENXXXXXXXX*INQFGFMPRRSTMEAYFL-RRLIKRY 265
K SHT+KLW+RVIE+ NQFGFMP RSTMEA FL R+L++RY
Sbjct: 64 KLMSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMERY 114
Score = 29.3 bits (64), Expect(3) = 1e-10
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 312 AYD*VNKDII*WALC*KRVTNRYIDLIKDM 401
+YD + ++++ WAL +V +YI LIKDM
Sbjct: 131 SYDKIPRNVMWWALKKHKVPAKYITLIKDM 160
Score = 25.0 bits (53), Expect(3) = 1e-10
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +1
Query: 271 EKKDLNMTFIDLE 309
+KKDL+M FIDLE
Sbjct: 117 QKKDLHMVFIDLE 129
>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
domestica]
Length = 622
Score = 58.9 bits (141), Expect(3) = 6e-10
Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = +2
Query: 116 KFTSHTIKLWKRVIENXXXXXXXX*INQFGFMPRRSTMEA-YFLRRLIKRY 265
K SHT+KLW+RVIE+ NQFGFMP RSTMEA Y LRRL++RY
Sbjct: 245 KLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERY 295
Score = 25.4 bits (54), Expect(3) = 6e-10
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = +3
Query: 312 AYD*VNKDII*WALC*KRVTNRYIDLIKDM 401
AYD V++DII L K V YI IKDM
Sbjct: 312 AYDRVSRDIIWRILEKKGVRVAYIQAIKDM 341
Score = 24.3 bits (51), Expect(3) = 6e-10
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 274 KKDLNMTFIDLE 309
KKDL+M FIDLE
Sbjct: 299 KKDLHMVFIDLE 310
>gb|EMT14674.1| Methyltransferase-like protein 13 [Aegilops tauschii]
Length = 1134
Score = 55.5 bits (132), Expect(3) = 9e-09
Identities = 30/51 (58%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Frame = +2
Query: 116 KFTSHTIKLWKRVIENXXXXXXXX*INQFGFMPRRSTMEAYFL-RRLIKRY 265
K SHT+KLW+RVIE+ NQFGFMP RSTMEA FL R+L+ RY
Sbjct: 394 KLMSHTMKLWERVIEHRLRRMTSVTKNQFGFMPGRSTMEAIFLVRQLMVRY 444
Score = 25.0 bits (53), Expect(3) = 9e-09
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +1
Query: 271 EKKDLNMTFIDLE 309
+KKDL+M FIDLE
Sbjct: 447 QKKDLHMVFIDLE 459
Score = 23.9 bits (50), Expect(3) = 9e-09
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 345 WALC*KRVTNRYIDLIKDM 401
WAL +V +YI LIKDM
Sbjct: 471 WALDKHKVPAKYITLIKDM 489
>emb|CCH50976.1| T4.15 [Malus x robusta]
Length = 986
Score = 58.9 bits (141), Expect(2) = 3e-08
Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = +2
Query: 116 KFTSHTIKLWKRVIENXXXXXXXX*INQFGFMPRRSTMEA-YFLRRLIKRY 265
K SHT+KLW+RVIE+ NQFGFMP RSTMEA Y LRRL++RY
Sbjct: 641 KLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERY 691
Score = 24.3 bits (51), Expect(2) = 3e-08
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1
Query: 274 KKDLNMTFIDLE 309
KKDL+M FIDLE
Sbjct: 695 KKDLHMVFIDLE 706
>gb|EMT12744.1| Exostosin-1 [Aegilops tauschii]
Length = 549
Score = 48.9 bits (115), Expect(3) = 1e-06
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +2
Query: 128 HTIKLWKRVIENXXXXXXXX*INQFGFMPRRSTMEAYFL-RRLIKRY 265
HT+KLW+RVIE+ NQFGF+P RS ME FL R+L++RY
Sbjct: 418 HTMKLWERVIEHRLRSMTSMTKNQFGFVPGRSIMEVIFLIRQLVERY 464
Score = 25.0 bits (53), Expect(3) = 1e-06
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +3
Query: 312 AYD*VNKDII*WALC*KRVTNRYIDLIKDM 401
AY+ + ++++ WAL +V +YI LI++M
Sbjct: 480 AYNKIPRNVMWWALEKHKVPAKYITLIRNM 509
Score = 23.1 bits (48), Expect(3) = 1e-06
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1
Query: 271 EKKDLNMTFIDLE 309
EKK L+M FIDLE
Sbjct: 466 EKKALHMVFIDLE 478
>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 517
Score = 50.4 bits (119), Expect(3) = 1e-06
Identities = 27/51 (52%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +2
Query: 116 KFTSHTIKLWKRVIENXXXXXXXX*INQFGFMPRRSTMEA-YFLRRLIKRY 265
K SHT+KLW+RVI+ NQFGFM RSTMEA Y L+R+++RY
Sbjct: 223 KLMSHTMKLWERVIKRRLRKETLVTDNQFGFMLGRSTMEAIYLLQRVMERY 273
Score = 24.3 bits (51), Expect(3) = 1e-06
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3
Query: 315 YD*VNKDII*WALC*KRVTNRYIDLIKDM 401
YD V ++I+ AL KRV YI IKDM
Sbjct: 291 YDRVPREILWKALEKKRVRIAYIRAIKDM 319
Score = 22.3 bits (46), Expect(3) = 1e-06
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = +1
Query: 271 EKKDLNMTFIDLE 309
+KKDL++ F DLE
Sbjct: 276 DKKDLHLVFFDLE 288