BLASTX nr result
ID: Cocculus22_contig00025491
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00025491
(269 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002528715.1| protein with unknown function [Ricinus commu... 69 9e-10
ref|XP_004305348.1| PREDICTED: uncharacterized protein LOC101314... 67 2e-09
ref|XP_002277150.2| PREDICTED: uncharacterized protein LOC100242... 67 3e-09
emb|CBI30264.3| unnamed protein product [Vitis vinifera] 67 3e-09
ref|XP_003542594.1| PREDICTED: transcription initiation factor T... 67 3e-09
ref|XP_004516193.1| PREDICTED: transcription initiation factor T... 66 4e-09
ref|XP_003537062.1| PREDICTED: transcription initiation factor T... 65 1e-08
ref|XP_007145316.1| hypothetical protein PHAVU_007G228800g [Phas... 64 2e-08
ref|XP_007203746.1| hypothetical protein PRUPE_ppa017159mg [Prun... 63 4e-08
ref|XP_006481807.1| PREDICTED: transcription initiation factor T... 63 5e-08
ref|XP_007027691.1| Transcription initiation factor TFIID subuni... 62 6e-08
ref|XP_007027689.1| Transcription initiation factor TFIID subuni... 62 6e-08
ref|XP_006430244.1| hypothetical protein CICLE_v10011440mg [Citr... 61 1e-07
ref|XP_004156257.1| PREDICTED: uncharacterized protein LOC101226... 61 1e-07
ref|XP_004143314.1| PREDICTED: uncharacterized protein LOC101211... 61 1e-07
ref|XP_002308150.1| transcription initiation factor IID subunit ... 61 2e-07
gb|EXB88734.1| Transcription initiation factor TFIID subunit 12 ... 60 3e-07
ref|XP_002884775.1| tata-associated factor II 58 [Arabidopsis ly... 60 3e-07
ref|NP_566367.1| TBP-associated factor 12 [Arabidopsis thaliana]... 59 9e-07
ref|XP_006297380.1| hypothetical protein CARUB_v10013405mg [Caps... 57 3e-06
>ref|XP_002528715.1| protein with unknown function [Ricinus communis]
gi|223531809|gb|EEF33627.1| protein with unknown
function [Ricinus communis]
Length = 451
Score = 68.6 bits (166), Expect = 9e-10
Identities = 31/53 (58%), Positives = 41/53 (77%)
Frame = -1
Query: 269 IKSYKKPMTSDVHKERLVAIKKSMQGSDAVSTKSTGGQATGNAKGHSTKVPSS 111
IK+Y+KP+TSD+HKERL IKKS+ SD S KS+ GQA GNAK + T+ P++
Sbjct: 390 IKTYRKPLTSDIHKERLAVIKKSILASDMASAKSSVGQAAGNAKSNLTRTPAN 442
>ref|XP_004305348.1| PREDICTED: uncharacterized protein LOC101314490 [Fragaria vesca
subsp. vesca]
Length = 538
Score = 67.4 bits (163), Expect = 2e-09
Identities = 30/51 (58%), Positives = 40/51 (78%)
Frame = -1
Query: 269 IKSYKKPMTSDVHKERLVAIKKSMQGSDAVSTKSTGGQATGNAKGHSTKVP 117
IK Y+KP+T+D+HK RL AIKKSM ++ +T+++ GQATGNAKG KVP
Sbjct: 474 IKGYRKPITNDIHKGRLAAIKKSMVATETANTRNSAGQATGNAKGGLVKVP 524
>ref|XP_002277150.2| PREDICTED: uncharacterized protein LOC100242486 [Vitis vinifera]
Length = 496
Score = 67.0 bits (162), Expect = 3e-09
Identities = 29/53 (54%), Positives = 39/53 (73%)
Frame = -1
Query: 269 IKSYKKPMTSDVHKERLVAIKKSMQGSDAVSTKSTGGQATGNAKGHSTKVPSS 111
IK++KKP SD+HKERL AIKKS G+++ +TKS+ GQ GN KGH K ++
Sbjct: 431 IKTFKKPFVSDIHKERLAAIKKSAVGTESANTKSSSGQGAGNTKGHPAKTSAN 483
>emb|CBI30264.3| unnamed protein product [Vitis vinifera]
Length = 372
Score = 67.0 bits (162), Expect = 3e-09
Identities = 29/53 (54%), Positives = 39/53 (73%)
Frame = -1
Query: 269 IKSYKKPMTSDVHKERLVAIKKSMQGSDAVSTKSTGGQATGNAKGHSTKVPSS 111
IK++KKP SD+HKERL AIKKS G+++ +TKS+ GQ GN KGH K ++
Sbjct: 307 IKTFKKPFVSDIHKERLAAIKKSAVGTESANTKSSSGQGAGNTKGHPAKTSAN 359
>ref|XP_003542594.1| PREDICTED: transcription initiation factor TFIID subunit 12-like
[Glycine max]
Length = 507
Score = 66.6 bits (161), Expect = 3e-09
Identities = 32/58 (55%), Positives = 43/58 (74%), Gaps = 2/58 (3%)
Frame = -1
Query: 269 IKSYKKPMTSDVHKERLVAIKKSMQGSDAVSTKSTGGQATGNAKGHSTKVPSS--GSP 102
IKSY++P+TSD+HKERL IKKSM ++A K + GQA+G+AKG+ K P + GSP
Sbjct: 445 IKSYRRPITSDIHKERLAVIKKSMASTEAAHGKGSAGQASGSAKGNQGKTPLNIIGSP 502
>ref|XP_004516193.1| PREDICTED: transcription initiation factor TFIID subunit 12-like
isoform X1 [Cicer arietinum]
gi|502178179|ref|XP_004516194.1| PREDICTED:
transcription initiation factor TFIID subunit 12-like
isoform X2 [Cicer arietinum]
Length = 523
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Frame = -1
Query: 269 IKSYKKPMTSDVHKERLVAIKKSMQGSDAVSTKSTGGQATGNAKGHSTKVPSS--GSP 102
IK+Y+KP+ SD+HKERL AIKKSM ++ +K T GQA+G+AKG K P + GSP
Sbjct: 461 IKNYRKPVPSDIHKERLAAIKKSMVATEVAHSKGTAGQASGSAKGGQAKTPFNVIGSP 518
>ref|XP_003537062.1| PREDICTED: transcription initiation factor TFIID subunit 12-like
[Glycine max]
Length = 507
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = -1
Query: 269 IKSYKKPMTSDVHKERLVAIKKSMQGSDAVSTKSTGGQATGNAKGHSTKVP 117
IKSY++P TSD+HKERL IKKSM ++A K + GQA+G+AKG+ K P
Sbjct: 445 IKSYRRPTTSDIHKERLTVIKKSMAATEAAHGKGSAGQASGSAKGNQGKTP 495
>ref|XP_007145316.1| hypothetical protein PHAVU_007G228800g [Phaseolus vulgaris]
gi|561018506|gb|ESW17310.1| hypothetical protein
PHAVU_007G228800g [Phaseolus vulgaris]
Length = 506
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 2/58 (3%)
Frame = -1
Query: 269 IKSYKKPMTSDVHKERLVAIKKSMQGSDAVSTKSTGGQATGNAKGHSTKVPSS--GSP 102
IKSY++ +TSD+HKERL AIKKSM ++ K + GQA+G+AKG+ K P + GSP
Sbjct: 444 IKSYRRQITSDIHKERLSAIKKSMTATELAHAKGSAGQASGSAKGNQAKTPMNIIGSP 501
>ref|XP_007203746.1| hypothetical protein PRUPE_ppa017159mg [Prunus persica]
gi|462399277|gb|EMJ04945.1| hypothetical protein
PRUPE_ppa017159mg [Prunus persica]
Length = 509
Score = 63.2 bits (152), Expect = 4e-08
Identities = 27/53 (50%), Positives = 40/53 (75%)
Frame = -1
Query: 269 IKSYKKPMTSDVHKERLVAIKKSMQGSDAVSTKSTGGQATGNAKGHSTKVPSS 111
IK ++KP+T+D+HKERL IKKS+ ++ + +S+ GQATGNAKG K P++
Sbjct: 440 IKGFRKPLTNDIHKERLSVIKKSIVATETANARSSTGQATGNAKGSLVKAPAN 492
>ref|XP_006481807.1| PREDICTED: transcription initiation factor TFIID subunit 12-like
[Citrus sinensis]
Length = 538
Score = 62.8 bits (151), Expect = 5e-08
Identities = 26/53 (49%), Positives = 41/53 (77%)
Frame = -1
Query: 269 IKSYKKPMTSDVHKERLVAIKKSMQGSDAVSTKSTGGQATGNAKGHSTKVPSS 111
IK+++KP+ D+HKERL AIKKS+ ++ S ++TGGQA +AKG+ K+P++
Sbjct: 481 IKTFRKPLVCDIHKERLAAIKKSVMATEVASARTTGGQAAASAKGNLGKMPAN 533
>ref|XP_007027691.1| Transcription initiation factor TFIID subunit 12, putative isoform
3 [Theobroma cacao] gi|508716296|gb|EOY08193.1|
Transcription initiation factor TFIID subunit 12,
putative isoform 3 [Theobroma cacao]
Length = 561
Score = 62.4 bits (150), Expect = 6e-08
Identities = 31/58 (53%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Frame = -1
Query: 269 IKSYKKPMTSDVHKERLVAIKKSMQGSDAVSTKSTGGQATGNAKGHSTKVPSS--GSP 102
IK+Y+KP+T+++HKERL AIKKS+ ++A +TK GGQA NAKG+ K ++ GSP
Sbjct: 496 IKTYRKPLTNEIHKERLAAIKKSILVTEATNTKHFGGQAAVNAKGNLGKAAANILGSP 553
>ref|XP_007027689.1| Transcription initiation factor TFIID subunit 12, putative isoform
1 [Theobroma cacao] gi|590631895|ref|XP_007027690.1|
Transcription initiation factor TFIID subunit 12,
putative isoform 1 [Theobroma cacao]
gi|508716294|gb|EOY08191.1| Transcription initiation
factor TFIID subunit 12, putative isoform 1 [Theobroma
cacao] gi|508716295|gb|EOY08192.1| Transcription
initiation factor TFIID subunit 12, putative isoform 1
[Theobroma cacao]
Length = 560
Score = 62.4 bits (150), Expect = 6e-08
Identities = 31/58 (53%), Positives = 44/58 (75%), Gaps = 2/58 (3%)
Frame = -1
Query: 269 IKSYKKPMTSDVHKERLVAIKKSMQGSDAVSTKSTGGQATGNAKGHSTKVPSS--GSP 102
IK+Y+KP+T+++HKERL AIKKS+ ++A +TK GGQA NAKG+ K ++ GSP
Sbjct: 495 IKTYRKPLTNEIHKERLAAIKKSILVTEATNTKHFGGQAAVNAKGNLGKAAANILGSP 552
>ref|XP_006430244.1| hypothetical protein CICLE_v10011440mg [Citrus clementina]
gi|557532301|gb|ESR43484.1| hypothetical protein
CICLE_v10011440mg [Citrus clementina]
Length = 537
Score = 61.2 bits (147), Expect = 1e-07
Identities = 25/53 (47%), Positives = 40/53 (75%)
Frame = -1
Query: 269 IKSYKKPMTSDVHKERLVAIKKSMQGSDAVSTKSTGGQATGNAKGHSTKVPSS 111
IK+++KP+ D+HKERL AIKKS+ ++ S ++TGGQ +AKG+ K+P++
Sbjct: 480 IKTFRKPLVCDIHKERLAAIKKSVMATEVASARTTGGQTAASAKGNLGKMPAN 532
>ref|XP_004156257.1| PREDICTED: uncharacterized protein LOC101226357 [Cucumis sativus]
Length = 511
Score = 61.2 bits (147), Expect = 1e-07
Identities = 26/52 (50%), Positives = 38/52 (73%)
Frame = -1
Query: 269 IKSYKKPMTSDVHKERLVAIKKSMQGSDAVSTKSTGGQATGNAKGHSTKVPS 114
IK ++KP+T+D H+ER+ A+KKS+ S+ ST+S+ GQA GN K TK P+
Sbjct: 459 IKIFRKPLTNDTHRERVAAVKKSIVASEMASTRSSAGQAAGNTKSSLTKTPA 510
>ref|XP_004143314.1| PREDICTED: uncharacterized protein LOC101211513 [Cucumis sativus]
Length = 511
Score = 61.2 bits (147), Expect = 1e-07
Identities = 26/52 (50%), Positives = 38/52 (73%)
Frame = -1
Query: 269 IKSYKKPMTSDVHKERLVAIKKSMQGSDAVSTKSTGGQATGNAKGHSTKVPS 114
IK ++KP+T+D H+ER+ A+KKS+ S+ ST+S+ GQA GN K TK P+
Sbjct: 459 IKIFRKPLTNDTHRERVAAVKKSIVASEMASTRSSAGQAAGNTKSSLTKTPA 510
>ref|XP_002308150.1| transcription initiation factor IID subunit A family protein
[Populus trichocarpa] gi|222854126|gb|EEE91673.1|
transcription initiation factor IID subunit A family
protein [Populus trichocarpa]
Length = 497
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/53 (54%), Positives = 40/53 (75%)
Frame = -1
Query: 269 IKSYKKPMTSDVHKERLVAIKKSMQGSDAVSTKSTGGQATGNAKGHSTKVPSS 111
IKSY+K +T+D+HKERL AIKKS+ S+ + K++ GQA GNAK +TK S+
Sbjct: 435 IKSYRKQVTNDIHKERLAAIKKSILTSEMANAKNSVGQAAGNAKSSTTKTLSN 487
>gb|EXB88734.1| Transcription initiation factor TFIID subunit 12 [Morus notabilis]
Length = 603
Score = 60.1 bits (144), Expect = 3e-07
Identities = 27/50 (54%), Positives = 38/50 (76%)
Frame = -1
Query: 269 IKSYKKPMTSDVHKERLVAIKKSMQGSDAVSTKSTGGQATGNAKGHSTKV 120
IKS++KP+ +D+H ERLVAIKKSM ++ +T++ GQA GNAKG +V
Sbjct: 512 IKSFRKPVVNDIHMERLVAIKKSMLTTETANTRNPSGQAAGNAKGSLPRV 561
>ref|XP_002884775.1| tata-associated factor II 58 [Arabidopsis lyrata subsp. lyrata]
gi|297330615|gb|EFH61034.1| tata-associated factor II 58
[Arabidopsis lyrata subsp. lyrata]
Length = 541
Score = 60.1 bits (144), Expect = 3e-07
Identities = 25/52 (48%), Positives = 39/52 (75%)
Frame = -1
Query: 266 KSYKKPMTSDVHKERLVAIKKSMQGSDAVSTKSTGGQATGNAKGHSTKVPSS 111
K+++KP+T+D+HKERL AIKKS+ ++A S ++ G T NA+G +K PS+
Sbjct: 481 KTFRKPLTTDIHKERLAAIKKSVTATEAASARNQFGHGTANARGGQSKTPSN 532
>ref|NP_566367.1| TBP-associated factor 12 [Arabidopsis thaliana]
gi|75266219|sp|Q9SR71.1|TAF12_ARATH RecName:
Full=Transcription initiation factor TFIID subunit 12;
AltName: Full=TBP-associated factor 12; Short=AtTAF12
gi|6143870|gb|AAF04417.1|AC010927_10 unknown protein
[Arabidopsis thaliana]
gi|13492646|gb|AAK28289.1|AF344878_1 putative
TBP-associated 58 kDa subunit protein [Arabidopsis
thaliana] gi|39545904|gb|AAR28015.1| TAF12 [Arabidopsis
thaliana] gi|62320727|dbj|BAD95394.1| hypothetical
protein [Arabidopsis thaliana]
gi|332641335|gb|AEE74856.1| TBP-associated factor 12
[Arabidopsis thaliana]
Length = 539
Score = 58.5 bits (140), Expect = 9e-07
Identities = 24/52 (46%), Positives = 38/52 (73%)
Frame = -1
Query: 266 KSYKKPMTSDVHKERLVAIKKSMQGSDAVSTKSTGGQATGNAKGHSTKVPSS 111
K+++KP+T+D+HKERL AIKKS+ ++A + ++ G T NA+G K PS+
Sbjct: 479 KTFRKPLTTDIHKERLAAIKKSVTATEAANARNQFGHGTANARGGQAKTPSN 530
>ref|XP_006297380.1| hypothetical protein CARUB_v10013405mg [Capsella rubella]
gi|482566089|gb|EOA30278.1| hypothetical protein
CARUB_v10013405mg [Capsella rubella]
Length = 539
Score = 57.0 bits (136), Expect = 3e-06
Identities = 22/52 (42%), Positives = 38/52 (73%)
Frame = -1
Query: 266 KSYKKPMTSDVHKERLVAIKKSMQGSDAVSTKSTGGQATGNAKGHSTKVPSS 111
K+++KP+T+D+HKERL IKKS+ ++A + +++ G T NA+G K P++
Sbjct: 480 KTFRKPLTTDIHKERLATIKKSVMATEAANARNSFGHGTANARGGQAKTPAN 531