BLASTX nr result
ID: Cocculus22_contig00025417
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00025417
(679 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004298112.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 61 3e-07
ref|XP_007035513.1| RING/U-box superfamily protein, putative iso... 59 1e-06
ref|XP_007035512.1| RING/U-box superfamily protein, putative iso... 59 1e-06
emb|CBI26097.3| unnamed protein product [Vitis vinifera] 59 2e-06
ref|XP_004169429.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 58 2e-06
ref|XP_004143083.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 58 2e-06
gb|ABR17356.1| unknown [Picea sitchensis] 58 2e-06
ref|XP_002276564.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 58 3e-06
ref|XP_006380195.1| zinc finger family protein [Populus trichoca... 58 3e-06
emb|CAN77823.1| hypothetical protein VITISV_043444 [Vitis vinifera] 58 3e-06
ref|XP_004241072.1| PREDICTED: E3 ubiquitin-protein ligase Topor... 57 7e-06
>ref|XP_004298112.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Fragaria vesca
subsp. vesca]
Length = 282
Score = 61.2 bits (147), Expect = 3e-07
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +1
Query: 25 FVEQLKPFLYEKTNMFWHELRCFALSVFDITTYDSVVVY 141
F+E L+PFL E+T+MFWHELRCFA S F++ TYD+VV Y
Sbjct: 240 FLEPLRPFLLERTDMFWHELRCFAESPFNMQTYDAVVEY 278
>ref|XP_007035513.1| RING/U-box superfamily protein, putative isoform 2 [Theobroma
cacao] gi|508714542|gb|EOY06439.1| RING/U-box
superfamily protein, putative isoform 2 [Theobroma
cacao]
Length = 289
Score = 59.3 bits (142), Expect = 1e-06
Identities = 27/43 (62%), Positives = 31/43 (72%)
Frame = +1
Query: 13 IEHKFVEQLKPFLYEKTNMFWHELRCFALSVFDITTYDSVVVY 141
+E F+ LKPFL+ TNMFWHEL CFA S F I TYD+VV Y
Sbjct: 243 VEDDFLVPLKPFLHNWTNMFWHELSCFAESSFTIETYDAVVEY 285
>ref|XP_007035512.1| RING/U-box superfamily protein, putative isoform 1 [Theobroma
cacao] gi|508714541|gb|EOY06438.1| RING/U-box
superfamily protein, putative isoform 1 [Theobroma
cacao]
Length = 301
Score = 59.3 bits (142), Expect = 1e-06
Identities = 27/43 (62%), Positives = 31/43 (72%)
Frame = +1
Query: 13 IEHKFVEQLKPFLYEKTNMFWHELRCFALSVFDITTYDSVVVY 141
+E F+ LKPFL+ TNMFWHEL CFA S F I TYD+VV Y
Sbjct: 255 VEDDFLVPLKPFLHNWTNMFWHELSCFAESSFTIETYDAVVEY 297
>emb|CBI26097.3| unnamed protein product [Vitis vinifera]
Length = 308
Score = 58.5 bits (140), Expect = 2e-06
Identities = 27/53 (50%), Positives = 37/53 (69%)
Frame = +1
Query: 7 LGIEHKFVEQLKPFLYEKTNMFWHELRCFALSVFDITTYDSVVVYE*T*IVNG 165
LG E F+ L+ FL+ +TN FWHEL CFA S F++ TYD+VV YE + ++ G
Sbjct: 214 LGGEDDFLAPLRSFLHNQTNTFWHELSCFADSTFNMETYDAVVKYEPSDLMGG 266
>ref|XP_004169429.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis
sativus]
Length = 288
Score = 58.2 bits (139), Expect = 2e-06
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = +1
Query: 7 LGIEHKFVEQLKPFLYEKTNMFWHELRCFALSVFDITTYDSVVVY 141
L E F+ L+PFL+EKT++FWHELRCFA S + YDSVV Y
Sbjct: 240 LNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEY 284
>ref|XP_004143083.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Cucumis
sativus]
Length = 288
Score = 58.2 bits (139), Expect = 2e-06
Identities = 26/45 (57%), Positives = 32/45 (71%)
Frame = +1
Query: 7 LGIEHKFVEQLKPFLYEKTNMFWHELRCFALSVFDITTYDSVVVY 141
L E F+ L+PFL+EKT++FWHELRCFA S + YDSVV Y
Sbjct: 240 LNAEDDFLSPLRPFLFEKTDLFWHELRCFAGSPLRMEEYDSVVEY 284
>gb|ABR17356.1| unknown [Picea sitchensis]
Length = 346
Score = 58.2 bits (139), Expect = 2e-06
Identities = 23/43 (53%), Positives = 33/43 (76%)
Frame = +1
Query: 16 EHKFVEQLKPFLYEKTNMFWHELRCFALSVFDITTYDSVVVYE 144
E +F++QL+PF+ +K N FWHELRCFA S F ++ YDS+ Y+
Sbjct: 294 EDEFMQQLEPFIGDKANAFWHELRCFAESPFTMSAYDSIAEYQ 336
>ref|XP_002276564.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Vitis vinifera]
Length = 294
Score = 57.8 bits (138), Expect = 3e-06
Identities = 26/46 (56%), Positives = 33/46 (71%)
Frame = +1
Query: 7 LGIEHKFVEQLKPFLYEKTNMFWHELRCFALSVFDITTYDSVVVYE 144
LG E F+ L+ FL+ +TN FWHEL CFA S F++ TYD+VV YE
Sbjct: 246 LGGEDDFLAPLRSFLHNQTNTFWHELSCFADSTFNMETYDAVVKYE 291
>ref|XP_006380195.1| zinc finger family protein [Populus trichocarpa]
gi|550333716|gb|ERP57992.1| zinc finger family protein
[Populus trichocarpa]
Length = 289
Score = 57.8 bits (138), Expect = 3e-06
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = +1
Query: 1 DCLGIEHKFVEQLKPFLYEKTNMFWHELRCFALSVFDITTYDSVVVYE 144
D LG+E F+E L+ FL+ TN FWHELRCFA S + TYD VV Y+
Sbjct: 239 DQLGVEDHFLEPLRRFLHGWTNTFWHELRCFAESSLTMETYDMVVEYK 286
>emb|CAN77823.1| hypothetical protein VITISV_043444 [Vitis vinifera]
Length = 321
Score = 57.8 bits (138), Expect = 3e-06
Identities = 26/46 (56%), Positives = 33/46 (71%)
Frame = +1
Query: 7 LGIEHKFVEQLKPFLYEKTNMFWHELRCFALSVFDITTYDSVVVYE 144
LG E F+ L+ FL+ +TN FWHEL CFA S F++ TYD+VV YE
Sbjct: 244 LGGEDDFLAPLRSFLHNQTNTFWHELSCFADSTFNMETYDAVVKYE 289
>ref|XP_004241072.1| PREDICTED: E3 ubiquitin-protein ligase Topors-like [Solanum
lycopersicum]
Length = 272
Score = 56.6 bits (135), Expect = 7e-06
Identities = 23/41 (56%), Positives = 32/41 (78%)
Frame = +1
Query: 19 HKFVEQLKPFLYEKTNMFWHELRCFALSVFDITTYDSVVVY 141
++F+ L+PFL+E+ +FWHELRCFA S F + TYD+VV Y
Sbjct: 228 NEFLAPLRPFLHERAEVFWHELRCFAESPFSMQTYDTVVEY 268