BLASTX nr result
ID: Cocculus22_contig00025388
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00025388
(311 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI24229.3| unnamed protein product [Vitis vinifera] 95 9e-18
ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containi... 95 9e-18
emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera] 95 9e-18
ref|XP_006470740.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
ref|XP_004291741.1| PREDICTED: pentatricopeptide repeat-containi... 93 4e-17
gb|EXC12414.1| hypothetical protein L484_001796 [Morus notabilis] 92 7e-17
ref|XP_007015317.1| Tetratricopeptide repeat-like superfamily pr... 91 2e-16
ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
ref|XP_007212464.1| hypothetical protein PRUPE_ppa015027mg, part... 81 2e-13
ref|XP_007146280.1| hypothetical protein PHAVU_006G027400g [Phas... 78 1e-12
ref|XP_004499531.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
ref|XP_006446259.1| hypothetical protein CICLE_v10014446mg [Citr... 77 2e-12
gb|EYU18584.1| hypothetical protein MIMGU_mgv1a025869mg [Mimulus... 75 1e-11
ref|XP_006345300.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
ref|XP_002872288.1| pentatricopeptide repeat-containing protein ... 73 4e-11
ref|XP_006286461.1| hypothetical protein CARUB_v10000365mg [Caps... 70 2e-10
ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containi... 70 2e-10
ref|XP_003588887.1| Pentatricopeptide repeat-containing protein ... 70 2e-10
>emb|CBI24229.3| unnamed protein product [Vitis vinifera]
Length = 547
Score = 95.1 bits (235), Expect = 9e-18
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = -2
Query: 310 NDVRKIRLKMKELKLKKNPGCSWIEIDKRIHPFYIEDKSHPQAEMIYDCSANLKKNMEDD 131
++VRK+RLK+KEL LKKNPGCSWIE+ KRIHPF +EDKSHPQA+MIY+C + L ++E
Sbjct: 483 DEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEKY 542
Query: 130 ELL 122
++L
Sbjct: 543 QVL 545
>ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 95.1 bits (235), Expect = 9e-18
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = -2
Query: 310 NDVRKIRLKMKELKLKKNPGCSWIEIDKRIHPFYIEDKSHPQAEMIYDCSANLKKNMEDD 131
++VRK+RLK+KEL LKKNPGCSWIE+ KRIHPF +EDKSHPQA+MIY+C + L ++E
Sbjct: 630 DEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEKY 689
Query: 130 ELL 122
++L
Sbjct: 690 QVL 692
>emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 95.1 bits (235), Expect = 9e-18
Identities = 41/63 (65%), Positives = 54/63 (85%)
Frame = -2
Query: 310 NDVRKIRLKMKELKLKKNPGCSWIEIDKRIHPFYIEDKSHPQAEMIYDCSANLKKNMEDD 131
++VRK+RLK+KEL LKKNPGCSWIE+ KRIHPF +EDKSHPQA+MIY+C + L ++E
Sbjct: 822 DEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADMIYECMSILASHVEKY 881
Query: 130 ELL 122
++L
Sbjct: 882 QVL 884
>ref|XP_006470740.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Citrus sinensis]
Length = 694
Score = 93.2 bits (230), Expect = 3e-17
Identities = 43/63 (68%), Positives = 52/63 (82%)
Frame = -2
Query: 310 NDVRKIRLKMKELKLKKNPGCSWIEIDKRIHPFYIEDKSHPQAEMIYDCSANLKKNMEDD 131
++VRKIRLKMKEL L+KNPGCSWIEI RI PF+ EDK +PQA+M+Y+C A L +ME D
Sbjct: 630 DEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFAEDKLYPQADMVYECLAILAGHMEKD 689
Query: 130 ELL 122
ELL
Sbjct: 690 ELL 692
>ref|XP_004291741.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Fragaria vesca subsp. vesca]
Length = 703
Score = 92.8 bits (229), Expect = 4e-17
Identities = 38/63 (60%), Positives = 54/63 (85%)
Frame = -2
Query: 310 NDVRKIRLKMKELKLKKNPGCSWIEIDKRIHPFYIEDKSHPQAEMIYDCSANLKKNMEDD 131
N++RK+RLKMKEL L+KNPGCSWIE+++RI F+++DKSHP++EM+Y C LK +M+ D
Sbjct: 630 NEMRKVRLKMKELGLRKNPGCSWIEVNRRIQYFFVQDKSHPESEMVYQCLKLLKTHMDGD 689
Query: 130 ELL 122
EL+
Sbjct: 690 ELV 692
>gb|EXC12414.1| hypothetical protein L484_001796 [Morus notabilis]
Length = 694
Score = 92.0 bits (227), Expect = 7e-17
Identities = 39/58 (67%), Positives = 51/58 (87%)
Frame = -2
Query: 310 NDVRKIRLKMKELKLKKNPGCSWIEIDKRIHPFYIEDKSHPQAEMIYDCSANLKKNME 137
+++RK+RLKMKEL L+KNPGCSWIEI+K+IH F++EDKSHPQAE+IY+C L NM+
Sbjct: 630 HELRKVRLKMKELGLRKNPGCSWIEINKQIHNFFLEDKSHPQAEIIYECLKMLSSNMD 687
>ref|XP_007015317.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
gi|508785680|gb|EOY32936.1| Tetratricopeptide
repeat-like superfamily protein [Theobroma cacao]
Length = 704
Score = 90.9 bits (224), Expect = 2e-16
Identities = 39/67 (58%), Positives = 52/67 (77%)
Frame = -2
Query: 310 NDVRKIRLKMKELKLKKNPGCSWIEIDKRIHPFYIEDKSHPQAEMIYDCSANLKKNMEDD 131
N VRK+RLKM++L L+KNPGCSWIE+D+RI F++ED SHPQA++IYDC ++L ME D
Sbjct: 630 NKVRKVRLKMRQLGLRKNPGCSWIEVDQRIQLFFVEDNSHPQAKIIYDCLSSLNSYMEKD 689
Query: 130 ELLLVTE 110
+ E
Sbjct: 690 NVTAAFE 696
>ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 84.3 bits (207), Expect = 2e-14
Identities = 39/64 (60%), Positives = 52/64 (81%)
Frame = -2
Query: 310 NDVRKIRLKMKELKLKKNPGCSWIEIDKRIHPFYIEDKSHPQAEMIYDCSANLKKNMEDD 131
++VRK+R KMKEL LKK+PGCSWIEI++RIHPF+ EDKS+P A+ +Y+C L +ME +
Sbjct: 630 DEVRKVRRKMKELGLKKSPGCSWIEINQRIHPFFAEDKSNPLADGVYECLNILGCHMEKN 689
Query: 130 ELLL 119
EL L
Sbjct: 690 ELEL 693
>ref|XP_007212464.1| hypothetical protein PRUPE_ppa015027mg, partial [Prunus persica]
gi|462408329|gb|EMJ13663.1| hypothetical protein
PRUPE_ppa015027mg, partial [Prunus persica]
Length = 660
Score = 80.9 bits (198), Expect = 2e-13
Identities = 33/45 (73%), Positives = 43/45 (95%)
Frame = -2
Query: 310 NDVRKIRLKMKELKLKKNPGCSWIEIDKRIHPFYIEDKSHPQAEM 176
++V+K+RLKMKEL L+KNPGCSWIEI+K+IHPF++ DKSHPQ+EM
Sbjct: 616 DEVKKVRLKMKELGLRKNPGCSWIEINKKIHPFFVGDKSHPQSEM 660
>ref|XP_007146280.1| hypothetical protein PHAVU_006G027400g [Phaseolus vulgaris]
gi|561019503|gb|ESW18274.1| hypothetical protein
PHAVU_006G027400g [Phaseolus vulgaris]
Length = 701
Score = 78.2 bits (191), Expect = 1e-12
Identities = 33/60 (55%), Positives = 47/60 (78%)
Frame = -2
Query: 310 NDVRKIRLKMKELKLKKNPGCSWIEIDKRIHPFYIEDKSHPQAEMIYDCSANLKKNMEDD 131
++VRK+R K+KEL LKKNPGCSWIEI++ I PF++ED SH E++Y C + L +M+D+
Sbjct: 630 DEVRKVRSKIKELGLKKNPGCSWIEINQNILPFFVEDNSHLHLELVYKCLSYLTGHMDDE 689
>ref|XP_004499531.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cicer arietinum]
Length = 697
Score = 78.2 bits (191), Expect = 1e-12
Identities = 34/60 (56%), Positives = 46/60 (76%)
Frame = -2
Query: 310 NDVRKIRLKMKELKLKKNPGCSWIEIDKRIHPFYIEDKSHPQAEMIYDCSANLKKNMEDD 131
++VR +R KMKEL LKKNPGCSWIEI+++I PF++ED SH E+I C + L +MED+
Sbjct: 630 DEVRMVRSKMKELGLKKNPGCSWIEINQKIEPFFVEDNSHHHLEVINKCLSYLTSHMEDE 689
>ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like isoform X1 [Glycine max]
gi|571520914|ref|XP_006598078.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g27110-like isoform X2 [Glycine max]
gi|571520917|ref|XP_006598079.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g27110-like isoform X3 [Glycine max]
gi|571520921|ref|XP_006598080.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g27110-like isoform X4 [Glycine max]
gi|571520925|ref|XP_006598081.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g27110-like isoform X5 [Glycine max]
gi|571520929|ref|XP_006598082.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g27110-like isoform X6 [Glycine max]
gi|571520932|ref|XP_006598083.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g27110-like isoform X7 [Glycine max]
Length = 705
Score = 78.2 bits (191), Expect = 1e-12
Identities = 33/60 (55%), Positives = 47/60 (78%)
Frame = -2
Query: 310 NDVRKIRLKMKELKLKKNPGCSWIEIDKRIHPFYIEDKSHPQAEMIYDCSANLKKNMEDD 131
++VR +R KMKEL LKKNPGCSWIEI+++I PF++ED SH E+++ C + L +MED+
Sbjct: 630 DEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMEDE 689
>ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like isoform X1 [Glycine max]
gi|571473832|ref|XP_006586046.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g27110-like isoform X2 [Glycine max]
gi|571473834|ref|XP_006586047.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g27110-like isoform X3 [Glycine max]
gi|571473836|ref|XP_006586048.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g27110-like isoform X4 [Glycine max]
Length = 705
Score = 78.2 bits (191), Expect = 1e-12
Identities = 33/60 (55%), Positives = 47/60 (78%)
Frame = -2
Query: 310 NDVRKIRLKMKELKLKKNPGCSWIEIDKRIHPFYIEDKSHPQAEMIYDCSANLKKNMEDD 131
++VR +R KMKEL LKKNPGCSWIEI+++I PF++ED SH E+++ C + L +MED+
Sbjct: 630 DEVRVVRSKMKELGLKKNPGCSWIEINQKILPFFVEDNSHLHLELVFKCLSYLSDHMEDE 689
>ref|XP_006446259.1| hypothetical protein CICLE_v10014446mg [Citrus clementina]
gi|557548870|gb|ESR59499.1| hypothetical protein
CICLE_v10014446mg [Citrus clementina]
Length = 705
Score = 77.4 bits (189), Expect = 2e-12
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = -2
Query: 310 NDVRKIRLKMKELKLKKNPGCSWIEIDKRIHPFYIEDKSHPQAEMI 173
++VRKIRLKMKEL L+KNPGCSWIEI RI PF+ EDK HPQA+M+
Sbjct: 616 DEVRKIRLKMKELGLRKNPGCSWIEIGDRIQPFFAEDKLHPQADMV 661
>gb|EYU18584.1| hypothetical protein MIMGU_mgv1a025869mg [Mimulus guttatus]
Length = 630
Score = 74.7 bits (182), Expect = 1e-11
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = -2
Query: 301 RKIRLKMKELKLKKNPGCSWIEIDKRIHPFYIEDKSHPQAEMIYDCSANLKKNMEDDELL 122
R +R KMKE+ L+KNPGCSWIE+DKRI F DK+ QAE +Y C A++ +ME DE++
Sbjct: 570 RGVRFKMKEMGLRKNPGCSWIEVDKRIESFVAGDKTLAQAESVYGCLASIYGHMEKDEIV 629
>ref|XP_006345300.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Solanum tuberosum]
Length = 705
Score = 74.7 bits (182), Expect = 1e-11
Identities = 35/70 (50%), Positives = 47/70 (67%)
Frame = -2
Query: 310 NDVRKIRLKMKELKLKKNPGCSWIEIDKRIHPFYIEDKSHPQAEMIYDCSANLKKNMEDD 131
N+VRK+RLKMKEL L+K PGCSWIE+DKRI F +DKS + +Y C + + +ME
Sbjct: 628 NEVRKLRLKMKELGLRKKPGCSWIEVDKRIQTFLADDKSFLLVDDVYQCLSLINSDMETY 687
Query: 130 ELLLVTEEID 101
E L + + D
Sbjct: 688 ECLNIDSKGD 697
>ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297318125|gb|EFH48547.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 690
Score = 73.2 bits (178), Expect = 4e-11
Identities = 29/55 (52%), Positives = 45/55 (81%)
Frame = -2
Query: 301 RKIRLKMKELKLKKNPGCSWIEIDKRIHPFYIEDKSHPQAEMIYDCSANLKKNME 137
+++RLKMKE+ ++K PGCSWIE+++++ F+ ED+SHPQAE +Y+C A L +ME
Sbjct: 633 KRVRLKMKEVGMRKKPGCSWIEMNEKVCHFFAEDRSHPQAENVYECLALLSGHME 687
>ref|XP_006286461.1| hypothetical protein CARUB_v10000365mg [Capsella rubella]
gi|482555167|gb|EOA19359.1| hypothetical protein
CARUB_v10000365mg [Capsella rubella]
Length = 690
Score = 70.5 bits (171), Expect = 2e-10
Identities = 29/55 (52%), Positives = 42/55 (76%)
Frame = -2
Query: 301 RKIRLKMKELKLKKNPGCSWIEIDKRIHPFYIEDKSHPQAEMIYDCSANLKKNME 137
R++RLKMKE+ L K PGCSWIE+D+++ F+ +DKSHPQAE + +C L ++E
Sbjct: 633 RRVRLKMKEVGLMKKPGCSWIEMDEKVCHFFADDKSHPQAENVCECLTRLSGHIE 687
>ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 70.5 bits (171), Expect = 2e-10
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = -2
Query: 310 NDVRKIRLKMKELKLKKNPGCSWIEIDKRIHPFYIEDKSHPQAEMIY 170
NDV ++RL+MK LKKNPGCSWIE+D +IH F DKSHPQ + IY
Sbjct: 770 NDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIY 816
>ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 697
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/60 (53%), Positives = 45/60 (75%)
Frame = -2
Query: 310 NDVRKIRLKMKELKLKKNPGCSWIEIDKRIHPFYIEDKSHPQAEMIYDCSANLKKNMEDD 131
++VR +R KMK+L LKKNPGCSWIEI+++I PF++ED SH E I + + L +MED+
Sbjct: 630 DEVRMVRSKMKDLGLKKNPGCSWIEINEKIVPFFVEDNSHYHLEGIGNILSYLTSHMEDE 689