BLASTX nr result
ID: Cocculus22_contig00025336
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00025336
(424 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAU20769.1| berberine bridge enzyme [Thalictrum flavum subsp.... 92 7e-17
dbj|BAM44344.1| berberine bridge enzyme [Coptis japonica] 91 2e-16
gb|ACJ76784.1| berberine bridge enzyme 2 [Argemone mexicana] 89 6e-16
gb|AAD17487.1| berberine bridge enzyme [Berberis stolonifera] 88 1e-15
gb|ACJ76783.1| berberine bridge enzyme 1 [Argemone mexicana] 87 2e-15
sp|P30986.1|RETO_ESCCA RecName: Full=Reticuline oxidase; AltName... 87 2e-15
pdb|4EC3|A Chain A, Structure Of Berberine Bridge Enzyme, H174a ... 87 2e-15
pdb|3GSY|A Chain A, Structure Of Berberine Bridge Enzyme In Comp... 87 2e-15
pdb|3FWA|A Chain A, Structure Of Berberine Bridge Enzyme, C166a ... 87 2e-15
pdb|3FW9|A Chain A, Structure Of Berberine Bridge Enzyme In Comp... 87 2e-15
pdb|3FW8|A Chain A, Structure Of Berberine Bridge Enzyme, C166a ... 87 2e-15
pdb|3FW7|A Chain A, Structure Of Berberine Bridge Enzyme, H104a ... 87 2e-15
pdb|3D2D|A Chain A, Structure Of Berberine Bridge Enzyme In Comp... 87 2e-15
gb|EYU45533.1| hypothetical protein MIMGU_mgv1a020959mg, partial... 87 3e-15
ref|XP_002533924.1| d-lactate dehydrogenase, putative [Ricinus c... 86 4e-15
ref|XP_002264336.1| PREDICTED: reticuline oxidase-like [Vitis vi... 86 5e-15
ref|XP_007099511.1| FAD-binding Berberine family protein [Theobr... 85 9e-15
ref|XP_007213478.1| hypothetical protein PRUPE_ppa023762mg [Prun... 84 2e-14
gb|EXC32491.1| Reticuline oxidase [Morus notabilis] 83 3e-14
ref|XP_006478292.1| PREDICTED: reticuline oxidase-like [Citrus s... 83 3e-14
>gb|AAU20769.1| berberine bridge enzyme [Thalictrum flavum subsp. glaucum]
Length = 535
Score = 92.0 bits (227), Expect = 7e-17
Identities = 44/77 (57%), Positives = 53/77 (68%)
Frame = -1
Query: 424 DLDLGVMDWGNRNISADEHVELGRVWGEKYFLMNYDRLVRAKTAIDPNNVFRHQQSIPPK 245
DLDLG +DW N+ IS+ +E+ R WGEKYF+ NYDRLVRAKT IDP NVF H QSIP
Sbjct: 459 DLDLGRIDWVNKTISSGRAIEIARTWGEKYFMSNYDRLVRAKTMIDPKNVFNHPQSIP-- 516
Query: 244 PLQGLCTDEVRNHYTSY 194
PL + D V+ + Y
Sbjct: 517 PLLEIMLDNVKENDVIY 533
>dbj|BAM44344.1| berberine bridge enzyme [Coptis japonica]
Length = 533
Score = 90.9 bits (224), Expect = 2e-16
Identities = 40/59 (67%), Positives = 45/59 (76%)
Frame = -1
Query: 424 DLDLGVMDWGNRNISADEHVELGRVWGEKYFLMNYDRLVRAKTAIDPNNVFRHQQSIPP 248
D D G +DW N +ISA + +E+ R WGEKYFL NYDRLV AKT IDPNNVF H QSIPP
Sbjct: 462 DFDFGTIDWTNSSISASKAIEIARTWGEKYFLSNYDRLVGAKTLIDPNNVFSHPQSIPP 520
>gb|ACJ76784.1| berberine bridge enzyme 2 [Argemone mexicana]
Length = 536
Score = 89.0 bits (219), Expect = 6e-16
Identities = 39/59 (66%), Positives = 48/59 (81%)
Frame = -1
Query: 424 DLDLGVMDWGNRNISADEHVELGRVWGEKYFLMNYDRLVRAKTAIDPNNVFRHQQSIPP 248
DLDLG +DW N+N S++ +E+ R WGEKYFL NY+RL+RAKT IDPNN+F H QSIPP
Sbjct: 468 DLDLGGIDWSNKN-SSNNAIEIARNWGEKYFLSNYERLIRAKTLIDPNNIFNHPQSIPP 525
>gb|AAD17487.1| berberine bridge enzyme [Berberis stolonifera]
Length = 536
Score = 88.2 bits (217), Expect = 1e-15
Identities = 41/65 (63%), Positives = 48/65 (73%)
Frame = -1
Query: 424 DLDLGVMDWGNRNISADEHVELGRVWGEKYFLMNYDRLVRAKTAIDPNNVFRHQQSIPPK 245
DLDLG +DW N I+++ +E+ R WGEKYFL NY+RLVRAKT IDP NVF H QSIPP
Sbjct: 458 DLDLGRLDWTNSTIASNA-IEIARTWGEKYFLSNYERLVRAKTLIDPKNVFHHPQSIPPM 516
Query: 244 PLQGL 230
P L
Sbjct: 517 PQDDL 521
>gb|ACJ76783.1| berberine bridge enzyme 1 [Argemone mexicana]
Length = 554
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/59 (66%), Positives = 48/59 (81%)
Frame = -1
Query: 424 DLDLGVMDWGNRNISADEHVELGRVWGEKYFLMNYDRLVRAKTAIDPNNVFRHQQSIPP 248
DLDLG +DW ++N S++ +E+ R WGEKYFL NY+RL+RAKT IDPNNVF H QSIPP
Sbjct: 473 DLDLGGIDWSDKN-SSNNAIEIARNWGEKYFLSNYERLIRAKTLIDPNNVFNHPQSIPP 530
>sp|P30986.1|RETO_ESCCA RecName: Full=Reticuline oxidase; AltName: Full=Berberine
bridge-forming enzyme; Short=BBE; AltName:
Full=Tetrahydroprotoberberine synthase; Flags: Precursor
gi|239110|gb|AAB20352.1| (S)-reticuline:oxygen
oxidoreductase (methylene-bridge-forming) [Eschscholzia
californica] gi|2897944|gb|AAC39358.1| berberine bridge
enzyme [Eschscholzia californica]
Length = 538
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = -1
Query: 424 DLDLGVMDWGNRNISADEHVELGRVWGEKYFLMNYDRLVRAKTAIDPNNVFRHQQSIPP 248
DLDLG +DWGN+ + + +E+ R WGE YFL NY+RL+RAKT IDPNNVF H QSIPP
Sbjct: 461 DLDLGGIDWGNKTV-VNNAIEISRSWGESYFLSNYERLIRAKTLIDPNNVFNHPQSIPP 518
>pdb|4EC3|A Chain A, Structure Of Berberine Bridge Enzyme, H174a Variant In
Complex With (S)-Reticuline
Length = 519
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = -1
Query: 424 DLDLGVMDWGNRNISADEHVELGRVWGEKYFLMNYDRLVRAKTAIDPNNVFRHQQSIPP 248
DLDLG +DWGN+ + + +E+ R WGE YFL NY+RL+RAKT IDPNNVF H QSIPP
Sbjct: 442 DLDLGGIDWGNKTV-VNNAIEISRSWGESYFLSNYERLIRAKTLIDPNNVFNHPQSIPP 499
>pdb|3GSY|A Chain A, Structure Of Berberine Bridge Enzyme In Complex With
Dehydroscoulerine
Length = 519
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = -1
Query: 424 DLDLGVMDWGNRNISADEHVELGRVWGEKYFLMNYDRLVRAKTAIDPNNVFRHQQSIPP 248
DLDLG +DWGN+ + + +E+ R WGE YFL NY+RL+RAKT IDPNNVF H QSIPP
Sbjct: 442 DLDLGGIDWGNKTV-VNNAIEISRSWGESYFLSNYERLIRAKTLIDPNNVFNHPQSIPP 499
>pdb|3FWA|A Chain A, Structure Of Berberine Bridge Enzyme, C166a Variant In
Complex With (S)-Reticuline
Length = 497
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = -1
Query: 424 DLDLGVMDWGNRNISADEHVELGRVWGEKYFLMNYDRLVRAKTAIDPNNVFRHQQSIPP 248
DLDLG +DWGN+ + + +E+ R WGE YFL NY+RL+RAKT IDPNNVF H QSIPP
Sbjct: 436 DLDLGGIDWGNKTV-VNNAIEISRSWGESYFLSNYERLIRAKTLIDPNNVFNHPQSIPP 493
>pdb|3FW9|A Chain A, Structure Of Berberine Bridge Enzyme In Complex With
(S)-Scoulerine
Length = 495
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = -1
Query: 424 DLDLGVMDWGNRNISADEHVELGRVWGEKYFLMNYDRLVRAKTAIDPNNVFRHQQSIPP 248
DLDLG +DWGN+ + + +E+ R WGE YFL NY+RL+RAKT IDPNNVF H QSIPP
Sbjct: 436 DLDLGGIDWGNKTV-VNNAIEISRSWGESYFLSNYERLIRAKTLIDPNNVFNHPQSIPP 493
>pdb|3FW8|A Chain A, Structure Of Berberine Bridge Enzyme, C166a Variant
Length = 495
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = -1
Query: 424 DLDLGVMDWGNRNISADEHVELGRVWGEKYFLMNYDRLVRAKTAIDPNNVFRHQQSIPP 248
DLDLG +DWGN+ + + +E+ R WGE YFL NY+RL+RAKT IDPNNVF H QSIPP
Sbjct: 436 DLDLGGIDWGNKTV-VNNAIEISRSWGESYFLSNYERLIRAKTLIDPNNVFNHPQSIPP 493
>pdb|3FW7|A Chain A, Structure Of Berberine Bridge Enzyme, H104a Variant
Length = 498
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = -1
Query: 424 DLDLGVMDWGNRNISADEHVELGRVWGEKYFLMNYDRLVRAKTAIDPNNVFRHQQSIPP 248
DLDLG +DWGN+ + + +E+ R WGE YFL NY+RL+RAKT IDPNNVF H QSIPP
Sbjct: 439 DLDLGGIDWGNKTV-VNNAIEISRSWGESYFLSNYERLIRAKTLIDPNNVFNHPQSIPP 496
>pdb|3D2D|A Chain A, Structure Of Berberine Bridge Enzyme In Complex With
(S)-Reticuline gi|210060956|pdb|3D2H|A Chain A,
Structure Of Berberine Bridge Enzyme From Eschscholzia
Californica, Monoclinic Crystal Form
gi|210060957|pdb|3D2J|A Chain A, Structure Of Berberine
Bridge Enzyme From Eschscholzia Californica, Tetragonal
Crystal Form
Length = 538
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = -1
Query: 424 DLDLGVMDWGNRNISADEHVELGRVWGEKYFLMNYDRLVRAKTAIDPNNVFRHQQSIPP 248
DLDLG +DWGN+ + + +E+ R WGE YFL NY+RL+RAKT IDPNNVF H QSIPP
Sbjct: 461 DLDLGGIDWGNKTV-VNNAIEISRSWGESYFLSNYERLIRAKTLIDPNNVFNHPQSIPP 518
>gb|EYU45533.1| hypothetical protein MIMGU_mgv1a020959mg, partial [Mimulus
guttatus]
Length = 410
Score = 86.7 bits (213), Expect = 3e-15
Identities = 41/59 (69%), Positives = 47/59 (79%)
Frame = -1
Query: 424 DLDLGVMDWGNRNISADEHVELGRVWGEKYFLMNYDRLVRAKTAIDPNNVFRHQQSIPP 248
D DLGV+D+ NR+ + VE+ RVWGEKYFL NYDRLVRAKT IDP NVFR+QQ IPP
Sbjct: 341 DFDLGVVDFLNRSGYGGDDVEVARVWGEKYFLKNYDRLVRAKTVIDPFNVFRNQQGIPP 399
>ref|XP_002533924.1| d-lactate dehydrogenase, putative [Ricinus communis]
gi|223526119|gb|EEF28466.1| d-lactate dehydrogenase,
putative [Ricinus communis]
Length = 546
Score = 86.3 bits (212), Expect = 4e-15
Identities = 37/65 (56%), Positives = 51/65 (78%)
Frame = -1
Query: 424 DLDLGVMDWGNRNISADEHVELGRVWGEKYFLMNYDRLVRAKTAIDPNNVFRHQQSIPPK 245
D D+G M +++ +++ VE+ RVWGEKYFL N+DRLVRAKT IDP+NVF ++QSIPP
Sbjct: 476 DFDIGAMGMIKKSVPSEDAVEIARVWGEKYFLRNFDRLVRAKTLIDPDNVFNNEQSIPPL 535
Query: 244 PLQGL 230
PL+ +
Sbjct: 536 PLESV 540
>ref|XP_002264336.1| PREDICTED: reticuline oxidase-like [Vitis vinifera]
Length = 540
Score = 85.9 bits (211), Expect = 5e-15
Identities = 39/59 (66%), Positives = 46/59 (77%)
Frame = -1
Query: 424 DLDLGVMDWGNRNISADEHVELGRVWGEKYFLMNYDRLVRAKTAIDPNNVFRHQQSIPP 248
DLDLGVM+ N + S+ + VE+ R WGEKYFL NY+RLVR KT IDPNNVF +QQ IPP
Sbjct: 475 DLDLGVMEMVNSSFSSGDPVEIARAWGEKYFLNNYERLVRVKTLIDPNNVFNNQQGIPP 533
>ref|XP_007099511.1| FAD-binding Berberine family protein [Theobroma cacao]
gi|508728622|gb|EOY20519.1| FAD-binding Berberine family
protein [Theobroma cacao]
Length = 875
Score = 85.1 bits (209), Expect = 9e-15
Identities = 37/59 (62%), Positives = 48/59 (81%)
Frame = -1
Query: 424 DLDLGVMDWGNRNISADEHVELGRVWGEKYFLMNYDRLVRAKTAIDPNNVFRHQQSIPP 248
D D+GVM+ N ++ + + VE+ RVWGEKYFL NYDRLV+AKT IDPNN+F++QQ IPP
Sbjct: 517 DFDIGVMELINTSVPSYDTVEIARVWGEKYFLNNYDRLVKAKTLIDPNNIFKNQQGIPP 575
>ref|XP_007213478.1| hypothetical protein PRUPE_ppa023762mg [Prunus persica]
gi|462409343|gb|EMJ14677.1| hypothetical protein
PRUPE_ppa023762mg [Prunus persica]
Length = 422
Score = 84.0 bits (206), Expect = 2e-14
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = -1
Query: 424 DLDLGVMDWGNRNISADEHVELGRVWGEKYFLMNYDRLVRAKTAIDPNNVFRHQQSIPPK 245
DLDLG M + + +++ + VE+ R WGEKYFL NY+RLV+AKT IDP+NVFR+QQ IPP
Sbjct: 350 DLDLGTMRFVDPSVTTKDAVEIARDWGEKYFLNNYNRLVKAKTLIDPSNVFRNQQGIPPM 409
Query: 244 PLQGL 230
L GL
Sbjct: 410 SLAGL 414
>gb|EXC32491.1| Reticuline oxidase [Morus notabilis]
Length = 557
Score = 83.2 bits (204), Expect = 3e-14
Identities = 43/70 (61%), Positives = 49/70 (70%)
Frame = -1
Query: 424 DLDLGVMDWGNRNISADEHVELGRVWGEKYFLMNYDRLVRAKTAIDPNNVFRHQQSIPPK 245
D DLGVM N + D+ VE+ RVWGEKYFL N+DRLVRAKT IDP+NVF +QQ IPP
Sbjct: 486 DFDLGVM----LNSTIDDFVEIARVWGEKYFLDNFDRLVRAKTLIDPDNVFSNQQGIPPM 541
Query: 244 PLQGLCTDEV 215
L L EV
Sbjct: 542 TLVSLRAQEV 551
>ref|XP_006478292.1| PREDICTED: reticuline oxidase-like [Citrus sinensis]
Length = 551
Score = 83.2 bits (204), Expect = 3e-14
Identities = 37/59 (62%), Positives = 46/59 (77%)
Frame = -1
Query: 424 DLDLGVMDWGNRNISADEHVELGRVWGEKYFLMNYDRLVRAKTAIDPNNVFRHQQSIPP 248
D+DLG M+ N + + + VE+ RVWGEKYFL NYDRLV+AKT IDPNN+F +QQ IPP
Sbjct: 481 DIDLGEMELINSSFPSKDAVEIARVWGEKYFLKNYDRLVKAKTIIDPNNIFSNQQGIPP 539