BLASTX nr result
ID: Cocculus22_contig00025320
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00025320
(674 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helica... 242 7e-62
emb|CBI22072.3| unnamed protein product [Vitis vinifera] 242 7e-62
ref|XP_006366627.1| PREDICTED: probable ATP-dependent RNA helica... 234 1e-59
ref|XP_004243616.1| PREDICTED: probable ATP-dependent RNA helica... 234 1e-59
ref|XP_002307569.2| NUCLEAR DEIH-BOXHELICASE family protein [Pop... 229 5e-58
ref|XP_007048932.1| ATP-dependent RNA helicase, putative isoform... 226 7e-57
ref|XP_007048931.1| ATP-dependent RNA helicase, putative isoform... 226 7e-57
ref|XP_002456402.1| hypothetical protein SORBIDRAFT_03g035700 [S... 223 3e-56
ref|XP_004970095.1| PREDICTED: probable ATP-dependent RNA helica... 219 8e-55
ref|XP_007217089.1| hypothetical protein PRUPE_ppa000327mg [Prun... 219 8e-55
gb|AFW84953.1| hypothetical protein ZEAMMB73_997107 [Zea mays] 217 2e-54
ref|XP_003567152.1| PREDICTED: probable ATP-dependent RNA helica... 216 4e-54
gb|EXB53675.1| putative ATP-dependent RNA helicase YTHDC2 [Morus... 216 5e-54
ref|XP_006853352.1| hypothetical protein AMTR_s00032p00104970 [A... 216 5e-54
ref|XP_006437089.1| hypothetical protein CICLE_v10033885mg, part... 216 7e-54
ref|XP_006484996.1| PREDICTED: probable ATP-dependent RNA helica... 215 1e-53
ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinu... 213 4e-53
ref|NP_001044362.1| Os01g0767700 [Oryza sativa Japonica Group] g... 208 1e-51
gb|EEC71544.1| hypothetical protein OsI_03881 [Oryza sativa Indi... 208 1e-51
ref|XP_004147777.1| PREDICTED: probable ATP-dependent RNA helica... 205 9e-51
>ref|XP_002278608.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Vitis
vinifera]
Length = 1231
Score = 242 bits (618), Expect = 7e-62
Identities = 132/231 (57%), Positives = 164/231 (70%), Gaps = 10/231 (4%)
Frame = +3
Query: 12 MTRSGRKM---GRRAN--ATEALRIKFVQVLEDFRDRPDEVHTFEAGLKNFERAVVHQLC 176
MTRSG+K G + N E RI+ + L++FR+ +EV+TFEA L N ERAVVH++C
Sbjct: 1 MTRSGKKRQKDGEQNNPGVAEGTRIRISRALQEFRETHNEVYTFEANLTNHERAVVHEVC 60
Query: 177 KKMGMVSKSSGHGDQRCISVFKNRPKEPKQIWNKEKTTSRLSFSDETKEVLCDLFTRYPP 356
+KMGM SKSSG G QR +SV+K + K + KE+ L+FS+E KEVL DLFTRYPP
Sbjct: 61 RKMGMTSKSSGRGSQRRVSVYKTKKKVDTK---KEEGNPYLNFSEEAKEVLLDLFTRYPP 117
Query: 357 SDGEQTQNL--NHAGEVNKGSRKKDGTFCKPLMDKVEIAKKVESYASKAQ---HLRQIME 521
D E + N +G+ K KKD F +P M+K EIAKKVE AS+ + HLRQI E
Sbjct: 118 DDKEMVTQMVENGSGKTEKIWGKKDDIFGRPSMNKAEIAKKVELLASRIEEDPHLRQITE 177
Query: 522 ERTRLPIASFKDTITSTVESHQVVLVSGETGCGKTTQVPQMLLDYMWGRGE 674
R++LPIASFKD ITST+ESHQVVL+SGETGCGKTTQVPQ +LDYMWG+GE
Sbjct: 178 GRSKLPIASFKDVITSTIESHQVVLISGETGCGKTTQVPQFVLDYMWGKGE 228
>emb|CBI22072.3| unnamed protein product [Vitis vinifera]
Length = 1190
Score = 242 bits (618), Expect = 7e-62
Identities = 132/231 (57%), Positives = 164/231 (70%), Gaps = 10/231 (4%)
Frame = +3
Query: 12 MTRSGRKM---GRRAN--ATEALRIKFVQVLEDFRDRPDEVHTFEAGLKNFERAVVHQLC 176
MTRSG+K G + N E RI+ + L++FR+ +EV+TFEA L N ERAVVH++C
Sbjct: 1 MTRSGKKRQKDGEQNNPGVAEGTRIRISRALQEFRETHNEVYTFEANLTNHERAVVHEVC 60
Query: 177 KKMGMVSKSSGHGDQRCISVFKNRPKEPKQIWNKEKTTSRLSFSDETKEVLCDLFTRYPP 356
+KMGM SKSSG G QR +SV+K + K + KE+ L+FS+E KEVL DLFTRYPP
Sbjct: 61 RKMGMTSKSSGRGSQRRVSVYKTKKKVDTK---KEEGNPYLNFSEEAKEVLLDLFTRYPP 117
Query: 357 SDGEQTQNL--NHAGEVNKGSRKKDGTFCKPLMDKVEIAKKVESYASKAQ---HLRQIME 521
D E + N +G+ K KKD F +P M+K EIAKKVE AS+ + HLRQI E
Sbjct: 118 DDKEMVTQMVENGSGKTEKIWGKKDDIFGRPSMNKAEIAKKVELLASRIEEDPHLRQITE 177
Query: 522 ERTRLPIASFKDTITSTVESHQVVLVSGETGCGKTTQVPQMLLDYMWGRGE 674
R++LPIASFKD ITST+ESHQVVL+SGETGCGKTTQVPQ +LDYMWG+GE
Sbjct: 178 GRSKLPIASFKDVITSTIESHQVVLISGETGCGKTTQVPQFVLDYMWGKGE 228
>ref|XP_006366627.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Solanum
tuberosum]
Length = 1205
Score = 234 bits (598), Expect = 1e-59
Identities = 124/227 (54%), Positives = 156/227 (68%), Gaps = 5/227 (2%)
Frame = +3
Query: 9 KMTRSGRKMGRRANATEALRIKFVQVLEDFRDRPDEVHTFEAGLKNFERAVVHQLCKKMG 188
K + G+K N E+ +I+ QVLE FR DEV+TFE+ L N +RA VH LC+KMG
Sbjct: 14 KRQKKGQKQQEVTNVAESTQIRVAQVLEQFRASNDEVYTFESNLSNRDRAAVHMLCRKMG 73
Query: 189 MVSKSSGHGDQRCISVFKNRPKEPKQIWNKEKTTSRLSFSDETKEVLCDLFTRYPPSDGE 368
M SKSSG GDQR IS+FK K+ + S FS+E K L DLFTRYPP DGE
Sbjct: 74 MKSKSSGRGDQRRISIFKT--KQNMDTLKGKDVLSCFKFSEEAKYALQDLFTRYPPGDGE 131
Query: 369 QTQNL--NHAGEVNKGSRKKDGTFCKPLMDKVEIAKKVESYAS---KAQHLRQIMEERTR 533
++ + H+ + +K KKD FCKP M EIAK+VES+AS K ++RQI +R++
Sbjct: 132 TSEQVVGKHSKKFDKLRGKKDDMFCKPAMSTSEIAKRVESFASRIEKTPNMRQITLQRSK 191
Query: 534 LPIASFKDTITSTVESHQVVLVSGETGCGKTTQVPQMLLDYMWGRGE 674
LPIASFKD ITST+ES+QVVL+SGETGCGKTTQVPQ +LD+MWG+GE
Sbjct: 192 LPIASFKDAITSTIESNQVVLISGETGCGKTTQVPQFILDHMWGKGE 238
>ref|XP_004243616.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Solanum
lycopersicum]
Length = 1199
Score = 234 bits (598), Expect = 1e-59
Identities = 124/227 (54%), Positives = 157/227 (69%), Gaps = 5/227 (2%)
Frame = +3
Query: 9 KMTRSGRKMGRRANATEALRIKFVQVLEDFRDRPDEVHTFEAGLKNFERAVVHQLCKKMG 188
K + G+K N E+ RI+ QVLE FR DEV+TFE+ L N +RA VH LC+KMG
Sbjct: 16 KRQKKGQKQQEVTNVAESTRIRVAQVLEQFRVSNDEVYTFESNLSNRDRAAVHMLCRKMG 75
Query: 189 MVSKSSGHGDQRCISVFKNRPKEPKQIWNKEKTTSRLSFSDETKEVLCDLFTRYPPSDGE 368
M SKSSG GDQR IS+FK K+ + S FS+E K L DLFTRYPP DGE
Sbjct: 76 MKSKSSGRGDQRRISIFKT--KQNTDTMKGKDVLSCFKFSEEAKYALQDLFTRYPPGDGE 133
Query: 369 QTQNL--NHAGEVNKGSRKKDGTFCKPLMDKVEIAKKVESYAS---KAQHLRQIMEERTR 533
+ + H+ + +K KKD FCKP++ EIAK+VES+AS K+ ++RQI +R++
Sbjct: 134 TNEPVVGKHSKKFDKLRGKKDDMFCKPVISTSEIAKRVESFASRIEKSPNMRQITLQRSK 193
Query: 534 LPIASFKDTITSTVESHQVVLVSGETGCGKTTQVPQMLLDYMWGRGE 674
LPIASFKD ITST+ES+QVVL+SGETGCGKTTQVPQ +LD+MWG+GE
Sbjct: 194 LPIASFKDAITSTIESNQVVLISGETGCGKTTQVPQFILDHMWGKGE 240
>ref|XP_002307569.2| NUCLEAR DEIH-BOXHELICASE family protein [Populus trichocarpa]
gi|550339560|gb|EEE94565.2| NUCLEAR DEIH-BOXHELICASE
family protein [Populus trichocarpa]
Length = 1207
Score = 229 bits (585), Expect = 5e-58
Identities = 129/237 (54%), Positives = 162/237 (68%), Gaps = 13/237 (5%)
Frame = +3
Query: 3 ETKMTRS--GRKMGRRA------NATEALRIKFVQVLEDFRDRPDEVHTFEAGLKNFERA 158
ETK + G+K R+A EA I+ ++LE FR PD+V+TFEA L N++RA
Sbjct: 5 ETKAQKGKMGKKNQRKAAQQQNPRVAEATLIRISKILERFRAAPDQVYTFEANLSNYDRA 64
Query: 159 VVHQLCKKMGMVSKSSGHGDQRCISVFKNRPKEPKQIWNKEKTTSRLSFSDETKEVLCDL 338
VVH++CKKMGM SKSSG G QR +SV+KN K+ + KE T L+FS E+K VL +L
Sbjct: 65 VVHEVCKKMGMKSKSSGRGGQRRVSVYKNT-KKLDDVKGKENLT-HLTFSGESKMVLGEL 122
Query: 339 FTRYPPSDGEQTQNLN--HAGEVNKGSRKKDGTFCKPLMDKVEIAKKVESYASKAQH--- 503
F+ YPP +G L H+G K KKD F KP K EIAKKVES+AS+ +
Sbjct: 123 FSNYPPEEGGFGAELEGKHSGTAGKTREKKDDIFSKPSRKKAEIAKKVESFASRIEKDVK 182
Query: 504 LRQIMEERTRLPIASFKDTITSTVESHQVVLVSGETGCGKTTQVPQMLLDYMWGRGE 674
L+QI+E R++LPIASF D ITST+ESHQVVL+SGETGCGKTTQVPQ LLD+MWG+GE
Sbjct: 183 LKQIVEGRSKLPIASFMDVITSTIESHQVVLISGETGCGKTTQVPQFLLDHMWGKGE 239
>ref|XP_007048932.1| ATP-dependent RNA helicase, putative isoform 2 [Theobroma cacao]
gi|508701193|gb|EOX93089.1| ATP-dependent RNA helicase,
putative isoform 2 [Theobroma cacao]
Length = 1181
Score = 226 bits (575), Expect = 7e-57
Identities = 121/219 (55%), Positives = 155/219 (70%), Gaps = 5/219 (2%)
Frame = +3
Query: 33 MGRRANATEALRIKFVQVLEDFRDRPDEVHTFEAGLKNFERAVVHQLCKKMGMVSKSSGH 212
MG++ + E+ RI+ Q LE FR+ DEV+TF++ L N ERA+VH+ C+KMGM SKSSG
Sbjct: 1 MGKKKSVAESTRIQLAQTLEKFRESKDEVYTFDSTLSNKERALVHRACRKMGMKSKSSGR 60
Query: 213 GDQRCISVFKNRPKEPKQIWNKEKTTSRLSFSDETKEVLCDLFTRYPPSDGEQTQNL--N 386
G QR ISV+K R K ++ + ++FS + VL DLFT YPP DGE + L
Sbjct: 61 GSQRRISVYKIRGKVDNM--KGMESLTNMTFSGGAQVVLQDLFTHYPPDDGELGEKLVGK 118
Query: 387 HAGEVNKGSRKKDGTFCKPLMDKVEIAKKVESYAS---KAQHLRQIMEERTRLPIASFKD 557
++G+ K +KKD F KPLM EIA+KV++ AS K +LRQI EE ++LPIASF+D
Sbjct: 119 YSGKTAKVRKKKDDIFSKPLMSDTEIAEKVKTLASTIEKDPNLRQINEEMSKLPIASFRD 178
Query: 558 TITSTVESHQVVLVSGETGCGKTTQVPQMLLDYMWGRGE 674
ITSTVESHQVVL+SGETGCGKTTQVPQ LLDYMWG+G+
Sbjct: 179 VITSTVESHQVVLISGETGCGKTTQVPQYLLDYMWGKGK 217
>ref|XP_007048931.1| ATP-dependent RNA helicase, putative isoform 1 [Theobroma cacao]
gi|590710814|ref|XP_007048933.1| ATP-dependent RNA
helicase, putative isoform 1 [Theobroma cacao]
gi|508701192|gb|EOX93088.1| ATP-dependent RNA helicase,
putative isoform 1 [Theobroma cacao]
gi|508701194|gb|EOX93090.1| ATP-dependent RNA helicase,
putative isoform 1 [Theobroma cacao]
Length = 1207
Score = 226 bits (575), Expect = 7e-57
Identities = 121/219 (55%), Positives = 155/219 (70%), Gaps = 5/219 (2%)
Frame = +3
Query: 33 MGRRANATEALRIKFVQVLEDFRDRPDEVHTFEAGLKNFERAVVHQLCKKMGMVSKSSGH 212
MG++ + E+ RI+ Q LE FR+ DEV+TF++ L N ERA+VH+ C+KMGM SKSSG
Sbjct: 1 MGKKKSVAESTRIQLAQTLEKFRESKDEVYTFDSTLSNKERALVHRACRKMGMKSKSSGR 60
Query: 213 GDQRCISVFKNRPKEPKQIWNKEKTTSRLSFSDETKEVLCDLFTRYPPSDGEQTQNL--N 386
G QR ISV+K R K ++ + ++FS + VL DLFT YPP DGE + L
Sbjct: 61 GSQRRISVYKIRGKVDNM--KGMESLTNMTFSGGAQVVLQDLFTHYPPDDGELGEKLVGK 118
Query: 387 HAGEVNKGSRKKDGTFCKPLMDKVEIAKKVESYAS---KAQHLRQIMEERTRLPIASFKD 557
++G+ K +KKD F KPLM EIA+KV++ AS K +LRQI EE ++LPIASF+D
Sbjct: 119 YSGKTAKVRKKKDDIFSKPLMSDTEIAEKVKTLASTIEKDPNLRQINEEMSKLPIASFRD 178
Query: 558 TITSTVESHQVVLVSGETGCGKTTQVPQMLLDYMWGRGE 674
ITSTVESHQVVL+SGETGCGKTTQVPQ LLDYMWG+G+
Sbjct: 179 VITSTVESHQVVLISGETGCGKTTQVPQYLLDYMWGKGK 217
>ref|XP_002456402.1| hypothetical protein SORBIDRAFT_03g035700 [Sorghum bicolor]
gi|241928377|gb|EES01522.1| hypothetical protein
SORBIDRAFT_03g035700 [Sorghum bicolor]
Length = 1299
Score = 223 bits (569), Expect = 3e-56
Identities = 117/238 (49%), Positives = 158/238 (66%), Gaps = 14/238 (5%)
Frame = +3
Query: 3 ETKMTRSGRK---------MGRRANATEALRIKFVQVLEDFRDRPDEVHTFEAGLKNFER 155
+ +M R GRK G EA ++ +VLEDFR EV+TFE G+ ER
Sbjct: 102 DERMGRKGRKGKGAAAGPAAGGSGGMREATLVRVSKVLEDFRASNAEVYTFEPGISRQER 161
Query: 156 AVVHQLCKKMGMVSKSSGHGDQRCISVFKNRPKEPKQIWNKEKTTSRLSFSDETKEVLCD 335
A +HQ+C+KMGM+SKSSG+G++RC+SV+K + K ++ E+ S L FS+E + VL D
Sbjct: 162 AAIHQMCRKMGMLSKSSGNGEKRCLSVYKRKQKREPEM---EEGPSYLGFSEEARHVLQD 218
Query: 336 LFTRYPPSDGEQTQNL--NHAGEVNKGSRKKDGTFCKPLMDKVEIAKKVESYASKAQ--- 500
LF YPP D + + N + + K D FC+P+M K++I KKVE ASK
Sbjct: 219 LFMHYPPGDADLNGDFDRNSSDKAANIKWKTDSAFCRPVMSKLDITKKVEMLASKVNGSY 278
Query: 501 HLRQIMEERTRLPIASFKDTITSTVESHQVVLVSGETGCGKTTQVPQMLLDYMWGRGE 674
LR+IME+RT+LPI+SFKD ITST+E+HQVVL+SG+TGCGKTTQVPQ +LD+MWG+GE
Sbjct: 279 QLRKIMEDRTKLPISSFKDVITSTLENHQVVLISGQTGCGKTTQVPQYILDHMWGKGE 336
>ref|XP_004970095.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Setaria
italica]
Length = 1197
Score = 219 bits (557), Expect = 8e-55
Identities = 120/232 (51%), Positives = 155/232 (66%), Gaps = 11/232 (4%)
Frame = +3
Query: 12 MTRSGRKMGRRANAT------EALRIKFVQVLEDFRDRPDEVHTFEAGLKNFERAVVHQL 173
M R GRK G+ A A EA ++ +VLEDFR EV+TFE + ER +HQ+
Sbjct: 1 MGRKGRK-GKDAAAAGGGGVREATLVRVSKVLEDFRASDAEVYTFEPDISRLERGAIHQM 59
Query: 174 CKKMGMVSKSSGHGDQRCISVFKNRPKEPKQIWNKEKTTSRLSFSDETKEVLCDLFTRYP 353
C+KMGM SKSSG G+QR +SV+K++ K+ + E+ S L FS+E VL DLFT YP
Sbjct: 60 CRKMGMTSKSSGFGEQRRLSVYKSKRKQGPAM---EEGPSHLRFSEEAIHVLQDLFTHYP 116
Query: 354 PSDGEQ--TQNLNHAGEVNKGSRKKDGTFCKPLMDKVEIAKKVESYASK---AQHLRQIM 518
P D + N N +G+ K D FC+P M K +I KKVE ASK + LR+IM
Sbjct: 117 PDDADLHGDANRNSSGKAANTKWKTDSAFCRPAMSKPDITKKVEMLASKINGSTQLRKIM 176
Query: 519 EERTRLPIASFKDTITSTVESHQVVLVSGETGCGKTTQVPQMLLDYMWGRGE 674
E+R++LPI+SFKD ITST+E+HQVVL+SGETGCGKTTQVPQ +LD+MWG+GE
Sbjct: 177 EDRSKLPISSFKDAITSTLENHQVVLISGETGCGKTTQVPQYILDHMWGKGE 228
>ref|XP_007217089.1| hypothetical protein PRUPE_ppa000327mg [Prunus persica]
gi|462413239|gb|EMJ18288.1| hypothetical protein
PRUPE_ppa000327mg [Prunus persica]
Length = 1282
Score = 219 bits (557), Expect = 8e-55
Identities = 116/227 (51%), Positives = 156/227 (68%), Gaps = 5/227 (2%)
Frame = +3
Query: 9 KMTRSGRKMGRRANATEALRIKFVQVLEDFRDRPDEVHTFEAGLKNFERAVVHQLCKKMG 188
K R G++ + + E++R + Q+L F DEV+TFEAGL N +RA VHQ C+KMG
Sbjct: 3 KKNRGGQQ--QNSKVPESMRNRIAQLLSRFNSADDEVYTFEAGLSNHDRAEVHQQCRKMG 60
Query: 189 MVSKSSGHGDQRCISVFKNRPKEPKQIWNKEKTTSRLSFSDETKEVLCDLFTRYPPSDGE 368
M SKS G G +R +SV+K PK+ + + L+FS+ TKEVL DLF YPP D
Sbjct: 61 MKSKSKGSGKKRVVSVYK--PKKKAAAVDGIPKLTHLTFSEGTKEVLRDLFMCYPPGDEV 118
Query: 369 QTQNL--NHAGEVNKGSRKKDGTFCKPLMDKVEIAKKVESYASKAQH---LRQIMEERTR 533
+ + + ++ E K RKKD FCKPLM K EIAKKV+S AS+ ++ LR+I +E+++
Sbjct: 119 EGREMYGTNSNENVKAKRKKDSMFCKPLMTKAEIAKKVQSLASRIKNSDKLRKITKEKSK 178
Query: 534 LPIASFKDTITSTVESHQVVLVSGETGCGKTTQVPQMLLDYMWGRGE 674
LPI S++D ITS VESHQV+L+SGETGCGKTTQVPQ +LD+MWG+GE
Sbjct: 179 LPITSYRDVITSAVESHQVILISGETGCGKTTQVPQFILDHMWGKGE 225
>gb|AFW84953.1| hypothetical protein ZEAMMB73_997107 [Zea mays]
Length = 985
Score = 217 bits (553), Expect = 2e-54
Identities = 113/234 (48%), Positives = 158/234 (67%), Gaps = 10/234 (4%)
Frame = +3
Query: 3 ETKMTRSGRK-----MGRRANATEALRIKFVQVLEDFRDRPDEVHTFEAGLKNFERAVVH 167
E M R GRK G A EA ++ + LEDFR EV+TFE + ERA +H
Sbjct: 77 EELMGRKGRKGKGAAAGGSAGMKEATLVRVSKALEDFRASNAEVYTFEPDISKQERAAIH 136
Query: 168 QLCKKMGMVSKSSGHGDQRCISVFKNRPKEPKQIWNKEKTTSRLSFSDETKEVLCDLFTR 347
++C+KMGM+SKSSG+G++R +SV+K + K ++ E+ S L FS+E + VL DLF
Sbjct: 137 EMCRKMGMISKSSGNGERRRLSVYKRKQKRGPEL---EQGPSYLGFSEEARHVLQDLFMH 193
Query: 348 YPPSDGEQTQNLNHAGEVNKGSRK--KDGTFCKPLMDKVEIAKKVESYASK---AQHLRQ 512
YPP D + + +++ + + K D FC+P M K++I KKVE ASK ++ LR+
Sbjct: 194 YPPGDADLSGDVDQSSSDKAANIKWRTDNAFCRPAMSKLDITKKVEMLASKINGSEQLRK 253
Query: 513 IMEERTRLPIASFKDTITSTVESHQVVLVSGETGCGKTTQVPQMLLDYMWGRGE 674
+ME+RT+LPI+SFKD ITST+E+HQVVL+SG+TGCGKTTQVPQ +LD+MWG+GE
Sbjct: 254 VMEDRTKLPISSFKDVITSTLENHQVVLISGQTGCGKTTQVPQYILDHMWGKGE 307
>ref|XP_003567152.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Brachypodium
distachyon]
Length = 1272
Score = 216 bits (551), Expect = 4e-54
Identities = 113/231 (48%), Positives = 159/231 (68%), Gaps = 7/231 (3%)
Frame = +3
Query: 3 ETKMTRSGRKM--GRRANATEALRIKFVQVLEDFRDRPDEVHTFEAGLKNFERAVVHQLC 176
E M R GRK G +E ++ VLE+FR +VHTFEA + ERA +H++C
Sbjct: 75 ERGMGRKGRKGNDGGLGGLSEETLVRVTTVLEEFRASDAQVHTFEANISKQERAAIHEIC 134
Query: 177 KKMGMVSKSSGHGDQRCISVFKNRPKEPKQIWNKEKTTSRLSFSDETKEVLCDLFTRYPP 356
+KMGM+SKS G+ ++RC+SV+K + + +KE+ S+L FS+E + VL DLFT YPP
Sbjct: 135 RKMGMISKSKGYAERRCLSVYKRKQTQGP---DKEEGPSKLGFSEEARNVLQDLFTHYPP 191
Query: 357 SDGEQTQNL--NHAGEVNKGSRKKDGTFCKPLMDKVEIAKKVESYASK---AQHLRQIME 521
+D E N + + K K D FC+P+M K +IAKKVE ASK ++ LR+I+E
Sbjct: 192 TDAELNGEAVKNSSDKAAKIQWKTDSAFCRPVMHKHDIAKKVEILASKINESRQLRKIVE 251
Query: 522 ERTRLPIASFKDTITSTVESHQVVLVSGETGCGKTTQVPQMLLDYMWGRGE 674
+R++LPI+SFKD I+ST+E++QVVL+SGETGCGKTTQVPQ +LD++WG+GE
Sbjct: 252 DRSKLPISSFKDHISSTLENNQVVLISGETGCGKTTQVPQYILDHVWGKGE 302
>gb|EXB53675.1| putative ATP-dependent RNA helicase YTHDC2 [Morus notabilis]
Length = 723
Score = 216 bits (550), Expect = 5e-54
Identities = 117/221 (52%), Positives = 156/221 (70%), Gaps = 6/221 (2%)
Frame = +3
Query: 30 KMGRRANATEALRIKFVQVLEDFRDRPDEVHTFEAGLKNFERAVVHQLCKKMGMVSKSSG 209
+ G +A+ +E I + L+ F+ +V+TFEAG+ N ERA VH LC++ GM SKSSG
Sbjct: 6 RKGGKASVSEGAGIHIRRALDRFQASNAKVYTFEAGMSNQERAFVHDLCRRRGMKSKSSG 65
Query: 210 HGDQRCISVFKNRPKEPKQIWNKE-KTTSRLSFSDETKEVLCDLFTRYPPSDGEQTQNL- 383
G+QRC++VFKN+ K NKE + + LSFS E + VL DLFTR+PP +GE+ Q
Sbjct: 66 RGNQRCVAVFKNKKKAED---NKELEGVTSLSFSKEAELVLQDLFTRFPPEEGEEGQATV 122
Query: 384 -NHAGEVNKGSRKKDGTFCKPLMDKVEIAKKVESYASKAQH---LRQIMEERTRLPIASF 551
+G++ R +D FC+PLM K +IAKKVES ASK ++ LRQ+ R++LPIA+F
Sbjct: 123 GGISGKIPNVHRWRDDMFCRPLMSKEQIAKKVESLASKIKNDAQLRQVTAGRSKLPIAAF 182
Query: 552 KDTITSTVESHQVVLVSGETGCGKTTQVPQMLLDYMWGRGE 674
+D ITSTVES+QVVL+SGETGCGKTTQVPQ LLDYMW +G+
Sbjct: 183 RDVITSTVESNQVVLLSGETGCGKTTQVPQFLLDYMWAKGK 223
>ref|XP_006853352.1| hypothetical protein AMTR_s00032p00104970 [Amborella trichopoda]
gi|548857005|gb|ERN14819.1| hypothetical protein
AMTR_s00032p00104970 [Amborella trichopoda]
Length = 1198
Score = 216 bits (550), Expect = 5e-54
Identities = 119/222 (53%), Positives = 154/222 (69%), Gaps = 5/222 (2%)
Frame = +3
Query: 18 RSGRKMGRRANATEALRIKFVQVLEDFRDRPDEVHTFEAGLKNFERAVVHQLCKKMGMVS 197
R G G + N E RIK ++ LE+F D V+TF+A L ERA VH + ++MG+VS
Sbjct: 4 RKGAWQGGKRNVGEESRIKILRTLEEFCAGNDIVYTFDADLDKEERAEVHFVSRRMGLVS 63
Query: 198 KSSGHGDQRCISVFKNRPKEPKQIWNKEKTTSRLSFSDETKEVLCDLFTRYPPSDGEQTQ 377
KSSGHGD+RC+SV K + + + L+FSDETK +L +LFT+YPP + E +Q
Sbjct: 64 KSSGHGDRRCVSVHKQSNGKAQMKKKENIEIEHLTFSDETKLILQNLFTQYPPFE-EVSQ 122
Query: 378 NLN-HAGEVNKG-SRKKDGTFCKPLMDKVEIAKKVESYASK---AQHLRQIMEERTRLPI 542
+N HA E G RK D TF KP M KVEIAK+VE AS+ ++HL++I E+R++LPI
Sbjct: 123 KINMHANECAMGVDRKNDSTFSKPSMLKVEIAKRVELLASRLRESRHLQEISEQRSKLPI 182
Query: 543 ASFKDTITSTVESHQVVLVSGETGCGKTTQVPQMLLDYMWGR 668
ASFKD ITS VE HQVVL++GETGCGKTTQVPQ LLD+MWG+
Sbjct: 183 ASFKDAITSAVEKHQVVLIAGETGCGKTTQVPQFLLDHMWGK 224
>ref|XP_006437089.1| hypothetical protein CICLE_v10033885mg, partial [Citrus clementina]
gi|557539285|gb|ESR50329.1| hypothetical protein
CICLE_v10033885mg, partial [Citrus clementina]
Length = 1197
Score = 216 bits (549), Expect = 7e-54
Identities = 119/211 (56%), Positives = 152/211 (72%), Gaps = 5/211 (2%)
Frame = +3
Query: 57 EALRIKFVQVLEDFRDRPDEVHTFEAGLKNFERAVVHQLCKKMGMVSKSSGHGDQRCISV 236
EA RI+ Q+L+ F DEV+TF+A L N ERAVVH++CKKMGM SKSSG G QR +SV
Sbjct: 26 EATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSV 85
Query: 237 FKNRPKEPKQIWNKEKTTSRLSFSDETKEVLCDLFTRYPPSDGEQTQNL--NHAGEVNKG 410
K++ K + KE S L+FS+ +K VL DLFT YPP DGE + L N + + +K
Sbjct: 86 CKSK-KRVETDKGKEILPS-LTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 143
Query: 411 SRKKDGTFCKPLMDKVEIAKKVESYASKAQ---HLRQIMEERTRLPIASFKDTITSTVES 581
K+D FCKP M K EIA KVES S+ + +LRQI+E R++LPI+SFKD ITSTV+S
Sbjct: 144 RGKRDDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEGRSKLPISSFKDVITSTVDS 203
Query: 582 HQVVLVSGETGCGKTTQVPQMLLDYMWGRGE 674
+QVVL+SGETGCGKTTQVPQ LL+++W +GE
Sbjct: 204 NQVVLISGETGCGKTTQVPQFLLEHIWSKGE 234
>ref|XP_006484996.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Citrus
sinensis]
Length = 1233
Score = 215 bits (547), Expect = 1e-53
Identities = 119/211 (56%), Positives = 152/211 (72%), Gaps = 5/211 (2%)
Frame = +3
Query: 57 EALRIKFVQVLEDFRDRPDEVHTFEAGLKNFERAVVHQLCKKMGMVSKSSGHGDQRCISV 236
EA RI+ Q+L+ F DEV+TF+A L N ERAVVH++CKKMGM SKSSG G QR +SV
Sbjct: 34 EATRIRISQILDGFLASKDEVYTFDANLSNRERAVVHEVCKKMGMTSKSSGRGKQRRVSV 93
Query: 237 FKNRPKEPKQIWNKEKTTSRLSFSDETKEVLCDLFTRYPPSDGEQTQNL--NHAGEVNKG 410
K++ K + KE S L+FS+ +K VL DLFT YPP DGE + L N + + +K
Sbjct: 94 CKSK-KRVETDKGKEILPS-LTFSEGSKLVLQDLFTHYPPDDGEPGEKLDANQSRKSDKT 151
Query: 411 SRKKDGTFCKPLMDKVEIAKKVESYASKAQ---HLRQIMEERTRLPIASFKDTITSTVES 581
K+ FCKP M K EIA KVES S+ + +LRQI+EER++LPI+SFKD ITSTV+S
Sbjct: 152 RGKRVDIFCKPKMSKAEIAMKVESLTSRIEKDANLRQIVEERSKLPISSFKDVITSTVDS 211
Query: 582 HQVVLVSGETGCGKTTQVPQMLLDYMWGRGE 674
+QVVL+SGETGCGKTTQVPQ LL+++W +GE
Sbjct: 212 NQVVLISGETGCGKTTQVPQFLLEHIWSKGE 242
>ref|XP_002520395.1| ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223540442|gb|EEF42011.1| ATP-dependent RNA helicase,
putative [Ricinus communis]
Length = 1229
Score = 213 bits (542), Expect = 4e-53
Identities = 118/227 (51%), Positives = 155/227 (68%), Gaps = 10/227 (4%)
Frame = +3
Query: 24 GRKMGRRA-----NATEALRIKFVQVLEDFRDRPDEVHTFEAGLKNFERAVVHQLCKKMG 188
G+K ++A N EA RI+ Q+LE FR D+V TFEA L N ERAVVH++CKK+G
Sbjct: 2 GKKRQKKAEQGNPNVAEATRIRISQILEQFRAAKDQVFTFEANLSNRERAVVHEVCKKLG 61
Query: 189 MVSKSSGHGDQRCISVFKNRPKEPKQIWNKEKTTSRLSFSDETKEVLCDLFTRYPPSDGE 368
M SKS+G G QR +S++K K N +++ + L+FS+E+K VL +LF YPP DGE
Sbjct: 62 MKSKSTGRGHQRRVSIYKIIQKA--DTGNGKESLTNLTFSEESKLVLQELFAYYPPEDGE 119
Query: 369 QTQNL--NHAGEVNKGSRKKDGTFCKPLMDKVEIAKKVESYASKAQ---HLRQIMEERTR 533
+ N + + KKDG F P M K +I KKVES S+ + +LRQI+E+R++
Sbjct: 120 LGAKIVGNCKAKDSIIQGKKDGIFSMPSMAKADITKKVESLNSRIEKDANLRQIVEQRSK 179
Query: 534 LPIASFKDTITSTVESHQVVLVSGETGCGKTTQVPQMLLDYMWGRGE 674
LPIASF+D ITSTVESHQ+VL+SGETGCGKTTQVPQ LL+Y WG+ E
Sbjct: 180 LPIASFRDVITSTVESHQIVLISGETGCGKTTQVPQYLLEYKWGKCE 226
>ref|NP_001044362.1| Os01g0767700 [Oryza sativa Japonica Group]
gi|53792445|dbj|BAD53353.1| putative DEIH-box RNA/DNA
helicase [Oryza sativa Japonica Group]
gi|53793557|dbj|BAD53327.1| putative DEIH-box RNA/DNA
helicase [Oryza sativa Japonica Group]
gi|113533893|dbj|BAF06276.1| Os01g0767700 [Oryza sativa
Japonica Group]
Length = 1223
Score = 208 bits (529), Expect = 1e-51
Identities = 105/218 (48%), Positives = 150/218 (68%), Gaps = 5/218 (2%)
Frame = +3
Query: 36 GRRANATEALRIKFVQVLEDFRDRPDEVHTFEAGLKNFERAVVHQLCKKMGMVSKSSGHG 215
G EA ++ +VLEDF+ +V+ FE G+ ERA +H++C+KMGM+SKSSG+G
Sbjct: 38 GGGGGVREATLVRVSKVLEDFQASDAQVYKFEPGISKQERAAIHEMCRKMGMISKSSGNG 97
Query: 216 DQRCISVFKNRPKEPKQIWNKEKTTSRLSFSDETKEVLCDLFTRYPPSDGEQTQNL--NH 389
++RC+SV+K + + + E+ S L FS E + VL DLF YPP D E + N
Sbjct: 98 ERRCLSVYKRKQNQGLET---EEGPSHLGFSVEARNVLQDLFMHYPPDDAELNGHTVRNS 154
Query: 390 AGEVNKGSRKKDGTFCKPLMDKVEIAKKVESYASK---AQHLRQIMEERTRLPIASFKDT 560
+ + K K DG FC+P + K +I KKVE ASK ++ LR+I+++R++LPI+S+KD
Sbjct: 155 SDKAVKIQWKPDGAFCRPALRKPDILKKVEMLASKVNKSEQLRKIVQDRSKLPISSYKDA 214
Query: 561 ITSTVESHQVVLVSGETGCGKTTQVPQMLLDYMWGRGE 674
I+ST+E+HQVVL+SGETGCGKTTQVPQ +LD+MWG+GE
Sbjct: 215 ISSTLENHQVVLISGETGCGKTTQVPQYILDHMWGKGE 252
>gb|EEC71544.1| hypothetical protein OsI_03881 [Oryza sativa Indica Group]
Length = 1277
Score = 208 bits (529), Expect = 1e-51
Identities = 105/218 (48%), Positives = 150/218 (68%), Gaps = 5/218 (2%)
Frame = +3
Query: 36 GRRANATEALRIKFVQVLEDFRDRPDEVHTFEAGLKNFERAVVHQLCKKMGMVSKSSGHG 215
G EA ++ +VLEDF+ +V+ FE G+ ERA +H++C+KMGM+SKSSG+G
Sbjct: 118 GGGGGVREATLVRVSKVLEDFQASDAQVYKFEPGISKQERAAIHEMCRKMGMISKSSGNG 177
Query: 216 DQRCISVFKNRPKEPKQIWNKEKTTSRLSFSDETKEVLCDLFTRYPPSDGEQTQNL--NH 389
++RC+SV+K + + + E+ S L FS E + VL DLF YPP D E + N
Sbjct: 178 ERRCLSVYKRKQNQGLET---EEGPSHLGFSVEARNVLQDLFMHYPPDDAELNGHTVRNS 234
Query: 390 AGEVNKGSRKKDGTFCKPLMDKVEIAKKVESYASK---AQHLRQIMEERTRLPIASFKDT 560
+ + K K DG FC+P + K +I KKVE ASK ++ LR+I+++R++LPI+S+KD
Sbjct: 235 SDKAVKIQWKPDGAFCRPALRKPDILKKVEMLASKVNKSEQLRKIVQDRSKLPISSYKDA 294
Query: 561 ITSTVESHQVVLVSGETGCGKTTQVPQMLLDYMWGRGE 674
I+ST+E+HQVVL+SGETGCGKTTQVPQ +LD+MWG+GE
Sbjct: 295 ISSTLENHQVVLISGETGCGKTTQVPQYILDHMWGKGE 332
>ref|XP_004147777.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
sativus]
Length = 1230
Score = 205 bits (522), Expect = 9e-51
Identities = 109/201 (54%), Positives = 140/201 (69%), Gaps = 3/201 (1%)
Frame = +3
Query: 81 QVLEDFRDRPDEVHTFEAGLKNFERAVVHQLCKKMGMVSKSSGHGDQRCISVFKNRPKEP 260
Q L+ F DEV TFEA L ERA+VH++C+KMGM SKSSGHGDQR +SV+K++ +
Sbjct: 27 QALQRFCLTHDEVFTFEADLSKRERALVHEVCRKMGMTSKSSGHGDQRRVSVYKSKLQ-- 84
Query: 261 KQIWNKEKTTSRLSFSDETKEVLCDLFTRYPPSDGEQTQNL--NHAGEVNKGSRKKDGTF 434
+ FS++TK VL DLF+ YPP DGE + NH + +K R+KD F
Sbjct: 85 ---------METVKFSEKTKTVLDDLFSMYPPDDGELGKETVGNHHKKADKPRRRKDDIF 135
Query: 435 CKPLMDKVEIAKKVESYASK-AQHLRQIMEERTRLPIASFKDTITSTVESHQVVLVSGET 611
+P M K E+ KKV SY K +++++ +R++LPIASF+D ITSTVESHQVVL+SGET
Sbjct: 136 WRPSMTKEELTKKVGSYTLKNVANMKKVSLKRSKLPIASFEDVITSTVESHQVVLISGET 195
Query: 612 GCGKTTQVPQMLLDYMWGRGE 674
GCGKTTQVPQ LLDYMWG+GE
Sbjct: 196 GCGKTTQVPQFLLDYMWGKGE 216