BLASTX nr result

ID: Cocculus22_contig00025287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00025287
         (355 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006286961.1| hypothetical protein CARUB_v10000110mg, part...   148   9e-34
ref|XP_006395029.1| hypothetical protein EUTSA_v10003625mg [Eutr...   146   3e-33
ref|XP_004485713.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   145   6e-33
ref|XP_002872326.1| hypothetical protein ARALYDRAFT_489660 [Arab...   145   6e-33
gb|EXB51813.1| Pre-mRNA-splicing factor SYF1 [Morus notabilis]        144   2e-32
ref|XP_007211348.1| hypothetical protein PRUPE_ppa001514mg [Prun...   144   2e-32
ref|XP_007148238.1| hypothetical protein PHAVU_006G191500g [Phas...   143   2e-32
ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   143   2e-32
ref|XP_003545847.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   143   2e-32
ref|XP_007025772.1| Tetratricopeptide repeat-like superfamily pr...   142   4e-32
ref|NP_198226.1| tetratricopeptide repeat domain-containing prot...   142   5e-32
ref|XP_002305003.1| transcription-coupled DNA repair family prot...   142   5e-32
ref|XP_006594623.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   142   6e-32
ref|XP_003635315.1| PREDICTED: pre-mRNA-splicing factor syf1-lik...   141   8e-32
emb|CBI23476.3| unnamed protein product [Vitis vinifera]              141   8e-32
emb|CAN65069.1| hypothetical protein VITISV_003952 [Vitis vinifera]   141   8e-32
ref|XP_002521433.1| XPA-binding protein, putative [Ricinus commu...   141   1e-31
ref|XP_006467884.1| PREDICTED: pre-mRNA-splicing factor SYF1-lik...   140   1e-31
ref|XP_006449232.1| hypothetical protein CICLE_v10014187mg [Citr...   140   1e-31
ref|XP_007210384.1| hypothetical protein PRUPE_ppa001061mg [Prun...   140   1e-31

>ref|XP_006286961.1| hypothetical protein CARUB_v10000110mg, partial [Capsella rubella]
           gi|482555667|gb|EOA19859.1| hypothetical protein
           CARUB_v10000110mg, partial [Capsella rubella]
          Length = 1050

 Score =  148 bits (373), Expect = 9e-34
 Identities = 69/78 (88%), Positives = 75/78 (96%)
 Frame = +3

Query: 120 SSMAISKELYPSEDDLLYEEEILRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPG 299
           S MAISK+LYPS++DLLYEEEILRNPFSLKLWWRYLIA+ ESPFKKR VIYERALKALPG
Sbjct: 131 SQMAISKDLYPSQEDLLYEEEILRNPFSLKLWWRYLIAKAESPFKKRFVIYERALKALPG 190

Query: 300 SYKLWYAYLRERLEVVRN 353
           SYKLWYAYLRERL++VRN
Sbjct: 191 SYKLWYAYLRERLDIVRN 208


>ref|XP_006395029.1| hypothetical protein EUTSA_v10003625mg [Eutrema salsugineum]
           gi|557091668|gb|ESQ32315.1| hypothetical protein
           EUTSA_v10003625mg [Eutrema salsugineum]
          Length = 916

 Score =  146 bits (368), Expect = 3e-33
 Identities = 67/76 (88%), Positives = 74/76 (97%)
 Frame = +3

Query: 126 MAISKELYPSEDDLLYEEEILRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPGSY 305
           MAISK+LYPS++DLLYEEEILRNPFSLKLWWRYLIA+ ESPFKKR +IYERALKALPGSY
Sbjct: 1   MAISKDLYPSQEDLLYEEEILRNPFSLKLWWRYLIAKAESPFKKRFIIYERALKALPGSY 60

Query: 306 KLWYAYLRERLEVVRN 353
           KLWYAYLRERL++VRN
Sbjct: 61  KLWYAYLRERLDIVRN 76


>ref|XP_004485713.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Cicer arietinum]
          Length = 914

 Score =  145 bits (366), Expect = 6e-33
 Identities = 67/76 (88%), Positives = 75/76 (98%)
 Frame = +3

Query: 126 MAISKELYPSEDDLLYEEEILRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPGSY 305
           M+IS+ELYPSEDDL+YEEE+LRNPFSLKLWWRYLIAR++SPFKKR VIYERALKALPGSY
Sbjct: 1   MSISQELYPSEDDLVYEEELLRNPFSLKLWWRYLIARSDSPFKKRFVIYERALKALPGSY 60

Query: 306 KLWYAYLRERLEVVRN 353
           KLWYAYLRERLE+VR+
Sbjct: 61  KLWYAYLRERLEIVRS 76


>ref|XP_002872326.1| hypothetical protein ARALYDRAFT_489660 [Arabidopsis lyrata subsp.
           lyrata] gi|297318163|gb|EFH48585.1| hypothetical protein
           ARALYDRAFT_489660 [Arabidopsis lyrata subsp. lyrata]
          Length = 928

 Score =  145 bits (366), Expect = 6e-33
 Identities = 66/76 (86%), Positives = 74/76 (97%)
 Frame = +3

Query: 126 MAISKELYPSEDDLLYEEEILRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPGSY 305
           MAISK+LYPS++DLLYEEE+LRNPFSLKLWWRYLIA+ ESPFKKR +IYERALKALPGSY
Sbjct: 1   MAISKDLYPSQEDLLYEEELLRNPFSLKLWWRYLIAKAESPFKKRFIIYERALKALPGSY 60

Query: 306 KLWYAYLRERLEVVRN 353
           KLWYAYLRERL++VRN
Sbjct: 61  KLWYAYLRERLDIVRN 76


>gb|EXB51813.1| Pre-mRNA-splicing factor SYF1 [Morus notabilis]
          Length = 915

 Score =  144 bits (362), Expect = 2e-32
 Identities = 65/76 (85%), Positives = 75/76 (98%)
 Frame = +3

Query: 126 MAISKELYPSEDDLLYEEEILRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPGSY 305
           MA+S+ELYPS+DDLLYEEE+LRNPFSLKLWWRYLIAR+E+PF+KR +IYERALKALPGSY
Sbjct: 1   MAVSQELYPSQDDLLYEEELLRNPFSLKLWWRYLIARSEAPFRKRFIIYERALKALPGSY 60

Query: 306 KLWYAYLRERLEVVRN 353
           KLW+AYLRERLE+VRN
Sbjct: 61  KLWHAYLRERLELVRN 76


>ref|XP_007211348.1| hypothetical protein PRUPE_ppa001514mg [Prunus persica]
           gi|462407213|gb|EMJ12547.1| hypothetical protein
           PRUPE_ppa001514mg [Prunus persica]
          Length = 811

 Score =  144 bits (362), Expect = 2e-32
 Identities = 67/76 (88%), Positives = 74/76 (97%)
 Frame = +3

Query: 126 MAISKELYPSEDDLLYEEEILRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPGSY 305
           M+IS+ELYPS+DDLLYEEE+LRNPFSLKLWWRYLIAR+ESPFKKR +IYERALKALPGSY
Sbjct: 1   MSISQELYPSQDDLLYEEELLRNPFSLKLWWRYLIARSESPFKKRFIIYERALKALPGSY 60

Query: 306 KLWYAYLRERLEVVRN 353
           KLW AYLRERLE+VRN
Sbjct: 61  KLWNAYLRERLELVRN 76


>ref|XP_007148238.1| hypothetical protein PHAVU_006G191500g [Phaseolus vulgaris]
           gi|561021461|gb|ESW20232.1| hypothetical protein
           PHAVU_006G191500g [Phaseolus vulgaris]
          Length = 916

 Score =  143 bits (361), Expect = 2e-32
 Identities = 66/76 (86%), Positives = 75/76 (98%)
 Frame = +3

Query: 126 MAISKELYPSEDDLLYEEEILRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPGSY 305
           MAI+++LYPSEDDLLYEEE+LRNPFSLKLWWRYLIAR+E+PFKKR VIYERALKALPGSY
Sbjct: 1   MAIAQDLYPSEDDLLYEEELLRNPFSLKLWWRYLIARSEAPFKKRFVIYERALKALPGSY 60

Query: 306 KLWYAYLRERLEVVRN 353
           KLW+AYLRERL++VRN
Sbjct: 61  KLWHAYLRERLDLVRN 76


>ref|XP_004134724.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Cucumis sativus]
          Length = 912

 Score =  143 bits (361), Expect = 2e-32
 Identities = 65/76 (85%), Positives = 74/76 (97%)
 Frame = +3

Query: 126 MAISKELYPSEDDLLYEEEILRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPGSY 305
           M+IS++LYPS+DDLLYEEE+LRNPFSLKLWWRYLIAR E+PFKKR +IYERALKALPGSY
Sbjct: 1   MSISQDLYPSQDDLLYEEELLRNPFSLKLWWRYLIARAEAPFKKRFIIYERALKALPGSY 60

Query: 306 KLWYAYLRERLEVVRN 353
           KLWYAYLRERL++VRN
Sbjct: 61  KLWYAYLRERLDLVRN 76


>ref|XP_003545847.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Glycine max]
          Length = 918

 Score =  143 bits (361), Expect = 2e-32
 Identities = 66/76 (86%), Positives = 75/76 (98%)
 Frame = +3

Query: 126 MAISKELYPSEDDLLYEEEILRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPGSY 305
           MAI+++LYPSEDDLLYEEE+LRNPFSLKLWWRYLIAR+E+PFKKR VIYERALKALPGSY
Sbjct: 1   MAIAQDLYPSEDDLLYEEELLRNPFSLKLWWRYLIARSEAPFKKRFVIYERALKALPGSY 60

Query: 306 KLWYAYLRERLEVVRN 353
           KLW+AYLRERL++VRN
Sbjct: 61  KLWHAYLRERLDLVRN 76


>ref|XP_007025772.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
           gi|508781138|gb|EOY28394.1| Tetratricopeptide
           repeat-like superfamily protein [Theobroma cacao]
          Length = 1041

 Score =  142 bits (359), Expect = 4e-32
 Identities = 64/76 (84%), Positives = 74/76 (97%)
 Frame = +3

Query: 126 MAISKELYPSEDDLLYEEEILRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPGSY 305
           M++ KELYPS+DDLLYEEE+LRNPFSLKLWWRYLIAR+++PFKKR +IYERALKALPGSY
Sbjct: 1   MSLPKELYPSQDDLLYEEELLRNPFSLKLWWRYLIARSDAPFKKRFIIYERALKALPGSY 60

Query: 306 KLWYAYLRERLEVVRN 353
           KLW+AYLRERLE+VRN
Sbjct: 61  KLWHAYLRERLEIVRN 76


>ref|NP_198226.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana] gi|7682783|gb|AAF67364.1| Hypothetical protein
           T32B20.g [Arabidopsis thaliana]
           gi|332006447|gb|AED93830.1| tetratricopeptide repeat
           domain-containing protein [Arabidopsis thaliana]
          Length = 917

 Score =  142 bits (358), Expect = 5e-32
 Identities = 65/76 (85%), Positives = 73/76 (96%)
 Frame = +3

Query: 126 MAISKELYPSEDDLLYEEEILRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPGSY 305
           MAISK+LYPS++DLLYEEE+LRN FSLKLWWRYLIA+ ESPFKKR +IYERALKALPGSY
Sbjct: 1   MAISKDLYPSQEDLLYEEELLRNQFSLKLWWRYLIAKAESPFKKRFIIYERALKALPGSY 60

Query: 306 KLWYAYLRERLEVVRN 353
           KLWYAYLRERL++VRN
Sbjct: 61  KLWYAYLRERLDIVRN 76


>ref|XP_002305003.1| transcription-coupled DNA repair family protein [Populus
           trichocarpa] gi|222847967|gb|EEE85514.1|
           transcription-coupled DNA repair family protein [Populus
           trichocarpa]
          Length = 908

 Score =  142 bits (358), Expect = 5e-32
 Identities = 66/76 (86%), Positives = 73/76 (96%)
 Frame = +3

Query: 126 MAISKELYPSEDDLLYEEEILRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPGSY 305
           M+ISKELYPS+DDLLYEEEILRNPFSLKLWWRYLIAR ESPFKKR +IYERAL+ALPGSY
Sbjct: 1   MSISKELYPSQDDLLYEEEILRNPFSLKLWWRYLIARRESPFKKRFIIYERALRALPGSY 60

Query: 306 KLWYAYLRERLEVVRN 353
           KLW+AYL ERL++VRN
Sbjct: 61  KLWHAYLVERLDIVRN 76


>ref|XP_006594623.1| PREDICTED: pre-mRNA-splicing factor SYF1-like isoform X1 [Glycine
           max]
          Length = 919

 Score =  142 bits (357), Expect = 6e-32
 Identities = 65/76 (85%), Positives = 74/76 (97%)
 Frame = +3

Query: 126 MAISKELYPSEDDLLYEEEILRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPGSY 305
           M I+++LYPSEDDLLYEEE+LRNPFSLKLWWRYLIAR+E+PFKKR VIYERALKALPGSY
Sbjct: 1   MVIAQDLYPSEDDLLYEEELLRNPFSLKLWWRYLIARSEAPFKKRFVIYERALKALPGSY 60

Query: 306 KLWYAYLRERLEVVRN 353
           KLW+AYLRERL++VRN
Sbjct: 61  KLWHAYLRERLDLVRN 76


>ref|XP_003635315.1| PREDICTED: pre-mRNA-splicing factor syf1-like [Vitis vinifera]
          Length = 816

 Score =  141 bits (356), Expect = 8e-32
 Identities = 65/76 (85%), Positives = 74/76 (97%)
 Frame = +3

Query: 126 MAISKELYPSEDDLLYEEEILRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPGSY 305
           MAI++ELYPS++DLLYEEE+LRN FSLKLWWRYLIAR++SPFKKR +IYERALKALPGSY
Sbjct: 1   MAIAEELYPSQEDLLYEEELLRNQFSLKLWWRYLIARSDSPFKKRFLIYERALKALPGSY 60

Query: 306 KLWYAYLRERLEVVRN 353
           KLWYAYLRERLE+VRN
Sbjct: 61  KLWYAYLRERLEIVRN 76


>emb|CBI23476.3| unnamed protein product [Vitis vinifera]
          Length = 914

 Score =  141 bits (356), Expect = 8e-32
 Identities = 65/76 (85%), Positives = 74/76 (97%)
 Frame = +3

Query: 126 MAISKELYPSEDDLLYEEEILRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPGSY 305
           MAI++ELYPS++DLLYEEE+LRN FSLKLWWRYLIAR++SPFKKR +IYERALKALPGSY
Sbjct: 1   MAIAEELYPSQEDLLYEEELLRNQFSLKLWWRYLIARSDSPFKKRFLIYERALKALPGSY 60

Query: 306 KLWYAYLRERLEVVRN 353
           KLWYAYLRERLE+VRN
Sbjct: 61  KLWYAYLRERLEIVRN 76


>emb|CAN65069.1| hypothetical protein VITISV_003952 [Vitis vinifera]
          Length = 920

 Score =  141 bits (356), Expect = 8e-32
 Identities = 65/76 (85%), Positives = 74/76 (97%)
 Frame = +3

Query: 126 MAISKELYPSEDDLLYEEEILRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPGSY 305
           MAI++ELYPS++DLLYEEE+LRN FSLKLWWRYLIAR++SPFKKR +IYERALKALPGSY
Sbjct: 1   MAIAEELYPSQEDLLYEEELLRNQFSLKLWWRYLIARSDSPFKKRFLIYERALKALPGSY 60

Query: 306 KLWYAYLRERLEVVRN 353
           KLWYAYLRERLE+VRN
Sbjct: 61  KLWYAYLRERLEIVRN 76


>ref|XP_002521433.1| XPA-binding protein, putative [Ricinus communis]
           gi|223539332|gb|EEF40923.1| XPA-binding protein,
           putative [Ricinus communis]
          Length = 916

 Score =  141 bits (355), Expect = 1e-31
 Identities = 64/76 (84%), Positives = 72/76 (94%)
 Frame = +3

Query: 126 MAISKELYPSEDDLLYEEEILRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPGSY 305
           M+I +ELYPS+DDLLYEEE+LRNPFSLKLWWRYL+AR ESPFKKR +IYERALKALPGSY
Sbjct: 1   MSIPRELYPSQDDLLYEEELLRNPFSLKLWWRYLVARRESPFKKRFIIYERALKALPGSY 60

Query: 306 KLWYAYLRERLEVVRN 353
           KLW+AYL ERLE+VRN
Sbjct: 61  KLWHAYLTERLEIVRN 76


>ref|XP_006467884.1| PREDICTED: pre-mRNA-splicing factor SYF1-like [Citrus sinensis]
          Length = 917

 Score =  140 bits (354), Expect = 1e-31
 Identities = 65/76 (85%), Positives = 72/76 (94%)
 Frame = +3

Query: 126 MAISKELYPSEDDLLYEEEILRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPGSY 305
           MAISKELYPSEDDLLYEEE+LRNPFSLKLWWRYL+A+ E+PFKKR VIYERALKALPGSY
Sbjct: 1   MAISKELYPSEDDLLYEEELLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALKALPGSY 60

Query: 306 KLWYAYLRERLEVVRN 353
           KLW+AYL ERL +V+N
Sbjct: 61  KLWHAYLIERLSIVKN 76


>ref|XP_006449232.1| hypothetical protein CICLE_v10014187mg [Citrus clementina]
           gi|557551843|gb|ESR62472.1| hypothetical protein
           CICLE_v10014187mg [Citrus clementina]
          Length = 916

 Score =  140 bits (354), Expect = 1e-31
 Identities = 65/76 (85%), Positives = 72/76 (94%)
 Frame = +3

Query: 126 MAISKELYPSEDDLLYEEEILRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPGSY 305
           MAISKELYPSEDDLLYEEE+LRNPFSLKLWWRYL+A+ E+PFKKR VIYERALKALPGSY
Sbjct: 1   MAISKELYPSEDDLLYEEELLRNPFSLKLWWRYLVAKREAPFKKRFVIYERALKALPGSY 60

Query: 306 KLWYAYLRERLEVVRN 353
           KLW+AYL ERL +V+N
Sbjct: 61  KLWHAYLIERLSIVKN 76


>ref|XP_007210384.1| hypothetical protein PRUPE_ppa001061mg [Prunus persica]
           gi|462406119|gb|EMJ11583.1| hypothetical protein
           PRUPE_ppa001061mg [Prunus persica]
          Length = 921

 Score =  140 bits (354), Expect = 1e-31
 Identities = 65/76 (85%), Positives = 73/76 (96%)
 Frame = +3

Query: 126 MAISKELYPSEDDLLYEEEILRNPFSLKLWWRYLIARTESPFKKRAVIYERALKALPGSY 305
           M+IS+ELYPS+DDLLYEEE+LRNPFSLK+WWRYLIAR+ESPFKKR +IYERALKALPGSY
Sbjct: 1   MSISQELYPSQDDLLYEEELLRNPFSLKVWWRYLIARSESPFKKRFIIYERALKALPGSY 60

Query: 306 KLWYAYLRERLEVVRN 353
           KLW AYL ERLE+VRN
Sbjct: 61  KLWSAYLHERLELVRN 76


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