BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00025146
         (270 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29964.3| unnamed protein product [Vitis vinifera]              116   3e-24
ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-lik...   116   3e-24
emb|CAN78747.1| hypothetical protein VITISV_022228 [Vitis vinifera]   116   3e-24
ref|XP_007029119.1| Cleavage and polyadenylation specificity fac...   113   2e-23
ref|XP_007029118.1| Cleavage and polyadenylation specificity fac...   113   2e-23
ref|XP_007029117.1| Cleavage and polyadenylation specificity fac...   113   2e-23
ref|XP_007029116.1| Cleavage and polyadenylation specificity fac...   113   2e-23
ref|XP_002308344.2| hypothetical protein POPTR_0006s21160g [Popu...   104   1e-20
ref|XP_004170344.1| PREDICTED: uncharacterized protein LOC101227...   102   6e-20
ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-lik...   102   6e-20
ref|XP_004303372.1| PREDICTED: pre-mRNA-splicing factor rse-1-li...   102   7e-20
gb|EXB29323.1| DNA damage-binding protein 1b [Morus notabilis]        101   9e-20
ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus ...   101   1e-19
ref|XP_006481687.1| PREDICTED: uncharacterized protein LOC102624...   100   2e-19
ref|XP_006481686.1| PREDICTED: uncharacterized protein LOC102624...   100   2e-19
ref|XP_006481685.1| PREDICTED: uncharacterized protein LOC102624...   100   2e-19
ref|XP_006577114.1| PREDICTED: splicing factor 3B subunit 3-like...   100   3e-19
ref|XP_006577113.1| PREDICTED: splicing factor 3B subunit 3-like...   100   3e-19
ref|XP_006577112.1| PREDICTED: splicing factor 3B subunit 3-like...   100   3e-19
ref|XP_006429954.1| hypothetical protein CICLE_v10011020mg [Citr...    98   1e-18

>emb|CBI29964.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score =  116 bits (291), Expect = 3e-24
 Identities = 54/89 (60%), Positives = 74/89 (83%)
 Frame = +2

Query: 2   GSVVAVSAYKDRLALFSISMSAGNNVVDKKLFYPPENEGNTINAQDIHRTSVRGTIWSMC 181
           G  +A SAY+DRLA+FSISM+  ++++DK++FYPPE EG++  A+ +HRTS+ GTIWSMC
Sbjct: 155 GCFIATSAYEDRLAMFSISMATDSDIIDKRIFYPPEIEGDSGVARSVHRTSISGTIWSMC 214

Query: 182 FIPKDVSQLSKDGYSPVLAIVINRNGAVL 268
           FI KD++Q S  GY+PVLAI++NR GAVL
Sbjct: 215 FISKDLNQPS-GGYNPVLAIILNRRGAVL 242


>ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera]
          Length = 1387

 Score =  116 bits (291), Expect = 3e-24
 Identities = 54/89 (60%), Positives = 74/89 (83%)
 Frame = +2

Query: 2   GSVVAVSAYKDRLALFSISMSAGNNVVDKKLFYPPENEGNTINAQDIHRTSVRGTIWSMC 181
           G  +A SAY+DRLA+FSISM+  ++++DK++FYPPE EG++  A+ +HRTS+ GTIWSMC
Sbjct: 155 GCFIATSAYEDRLAMFSISMATDSDIIDKRIFYPPEIEGDSGVARSVHRTSISGTIWSMC 214

Query: 182 FIPKDVSQLSKDGYSPVLAIVINRNGAVL 268
           FI KD++Q S  GY+PVLAI++NR GAVL
Sbjct: 215 FISKDLNQPS-GGYNPVLAIILNRRGAVL 242


>emb|CAN78747.1| hypothetical protein VITISV_022228 [Vitis vinifera]
          Length = 1298

 Score =  116 bits (291), Expect = 3e-24
 Identities = 54/89 (60%), Positives = 74/89 (83%)
 Frame = +2

Query: 2   GSVVAVSAYKDRLALFSISMSAGNNVVDKKLFYPPENEGNTINAQDIHRTSVRGTIWSMC 181
           G  +A SAY+DRLA+FSISM+  ++++DK++FYPPE EG++  A+ +HRTS+ GTIWSMC
Sbjct: 196 GCFIATSAYEDRLAMFSISMATDSDIIDKRIFYPPEIEGDSGVARSVHRTSISGTIWSMC 255

Query: 182 FIPKDVSQLSKDGYSPVLAIVINRNGAVL 268
           FI KD++Q S  GY+PVLAI++NR GAVL
Sbjct: 256 FISKDLNQPS-GGYNPVLAIILNRRGAVL 283


>ref|XP_007029119.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
           protein isoform 4 [Theobroma cacao]
           gi|508717724|gb|EOY09621.1| Cleavage and polyadenylation
           specificity factor (CPSF) A subunit protein isoform 4
           [Theobroma cacao]
          Length = 1127

 Score =  113 bits (283), Expect = 2e-23
 Identities = 52/89 (58%), Positives = 72/89 (80%)
 Frame = +2

Query: 2   GSVVAVSAYKDRLALFSISMSAGNNVVDKKLFYPPENEGNTINAQDIHRTSVRGTIWSMC 181
           G  +A SAY+DRLALFS+SMSAG++++D+++FYPPENEG+  + +   RTS+RGTIWSMC
Sbjct: 56  GCFIATSAYEDRLALFSLSMSAGDDIIDERIFYPPENEGSVSSTRSAQRTSIRGTIWSMC 115

Query: 182 FIPKDVSQLSKDGYSPVLAIVINRNGAVL 268
           F+ KD  Q +K+ ++PVLAIV+NR G  L
Sbjct: 116 FVSKDSFQPNKE-HNPVLAIVLNRKGNAL 143


>ref|XP_007029118.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
           protein isoform 3 [Theobroma cacao]
           gi|508717723|gb|EOY09620.1| Cleavage and polyadenylation
           specificity factor (CPSF) A subunit protein isoform 3
           [Theobroma cacao]
          Length = 1254

 Score =  113 bits (283), Expect = 2e-23
 Identities = 52/89 (58%), Positives = 72/89 (80%)
 Frame = +2

Query: 2   GSVVAVSAYKDRLALFSISMSAGNNVVDKKLFYPPENEGNTINAQDIHRTSVRGTIWSMC 181
           G  +A SAY+DRLALFS+SMSAG++++D+++FYPPENEG+  + +   RTS+RGTIWSMC
Sbjct: 164 GCFIATSAYEDRLALFSLSMSAGDDIIDERIFYPPENEGSVSSTRSAQRTSIRGTIWSMC 223

Query: 182 FIPKDVSQLSKDGYSPVLAIVINRNGAVL 268
           F+ KD  Q +K+ ++PVLAIV+NR G  L
Sbjct: 224 FVSKDSFQPNKE-HNPVLAIVLNRKGNAL 251


>ref|XP_007029117.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
           protein isoform 2, partial [Theobroma cacao]
           gi|508717722|gb|EOY09619.1| Cleavage and polyadenylation
           specificity factor (CPSF) A subunit protein isoform 2,
           partial [Theobroma cacao]
          Length = 1237

 Score =  113 bits (283), Expect = 2e-23
 Identities = 52/89 (58%), Positives = 72/89 (80%)
 Frame = +2

Query: 2   GSVVAVSAYKDRLALFSISMSAGNNVVDKKLFYPPENEGNTINAQDIHRTSVRGTIWSMC 181
           G  +A SAY+DRLALFS+SMSAG++++D+++FYPPENEG+  + +   RTS+RGTIWSMC
Sbjct: 76  GCFIATSAYEDRLALFSLSMSAGDDIIDERIFYPPENEGSVSSTRSAQRTSIRGTIWSMC 135

Query: 182 FIPKDVSQLSKDGYSPVLAIVINRNGAVL 268
           F+ KD  Q +K+ ++PVLAIV+NR G  L
Sbjct: 136 FVSKDSFQPNKE-HNPVLAIVLNRKGNAL 163


>ref|XP_007029116.1| Cleavage and polyadenylation specificity factor (CPSF) A subunit
           protein isoform 1 [Theobroma cacao]
           gi|508717721|gb|EOY09618.1| Cleavage and polyadenylation
           specificity factor (CPSF) A subunit protein isoform 1
           [Theobroma cacao]
          Length = 1391

 Score =  113 bits (283), Expect = 2e-23
 Identities = 52/89 (58%), Positives = 72/89 (80%)
 Frame = +2

Query: 2   GSVVAVSAYKDRLALFSISMSAGNNVVDKKLFYPPENEGNTINAQDIHRTSVRGTIWSMC 181
           G  +A SAY+DRLALFS+SMSAG++++D+++FYPPENEG+  + +   RTS+RGTIWSMC
Sbjct: 164 GCFIATSAYEDRLALFSLSMSAGDDIIDERIFYPPENEGSVSSTRSAQRTSIRGTIWSMC 223

Query: 182 FIPKDVSQLSKDGYSPVLAIVINRNGAVL 268
           F+ KD  Q +K+ ++PVLAIV+NR G  L
Sbjct: 224 FVSKDSFQPNKE-HNPVLAIVLNRKGNAL 251


>ref|XP_002308344.2| hypothetical protein POPTR_0006s21160g [Populus trichocarpa]
           gi|550336774|gb|EEE91867.2| hypothetical protein
           POPTR_0006s21160g [Populus trichocarpa]
          Length = 1397

 Score =  104 bits (259), Expect = 1e-20
 Identities = 50/89 (56%), Positives = 67/89 (75%)
 Frame = +2

Query: 2   GSVVAVSAYKDRLALFSISMSAGNNVVDKKLFYPPENEGNTINAQDIHRTSVRGTIWSMC 181
           G  VA SAY+D+LALFS+S S G+ ++D+++ YPPENEGN   A+ I R    GTIWSMC
Sbjct: 165 GCFVATSAYEDQLALFSLSASGGSEIIDERILYPPENEGNANVARSIQRPLTSGTIWSMC 224

Query: 182 FIPKDVSQLSKDGYSPVLAIVINRNGAVL 268
           FI +D S  SK+ ++PVLAI++NR GA+L
Sbjct: 225 FISRDSSHPSKE-HNPVLAIILNRRGALL 252


>ref|XP_004170344.1| PREDICTED: uncharacterized protein LOC101227016, partial [Cucumis
           sativus]
          Length = 997

 Score =  102 bits (254), Expect = 6e-20
 Identities = 45/89 (50%), Positives = 71/89 (79%)
 Frame = +2

Query: 2   GSVVAVSAYKDRLALFSISMSAGNNVVDKKLFYPPENEGNTINAQDIHRTSVRGTIWSMC 181
           G  +A SAY++RLALFS S+SAG+++VDK++ YPP++EG+++  + + + S+ GTIWSMC
Sbjct: 157 GCFIAASAYENRLALFSTSISAGSDIVDKRITYPPDSEGDSVAPRSMQKASICGTIWSMC 216

Query: 182 FIPKDVSQLSKDGYSPVLAIVINRNGAVL 268
           FI KD   L++D  +P+LA+++NR GA+L
Sbjct: 217 FISKDRGHLTQDN-NPILAVLLNRRGAIL 244


>ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
          Length = 1376

 Score =  102 bits (254), Expect = 6e-20
 Identities = 45/89 (50%), Positives = 71/89 (79%)
 Frame = +2

Query: 2   GSVVAVSAYKDRLALFSISMSAGNNVVDKKLFYPPENEGNTINAQDIHRTSVRGTIWSMC 181
           G  +A SAY++RLALFS S+SAG+++VDK++ YPP++EG+++  + + + S+ GTIWSMC
Sbjct: 157 GCFIAASAYENRLALFSTSISAGSDIVDKRITYPPDSEGDSVAPRSMQKASICGTIWSMC 216

Query: 182 FIPKDVSQLSKDGYSPVLAIVINRNGAVL 268
           FI KD   L++D  +P+LA+++NR GA+L
Sbjct: 217 FISKDRGHLTQDN-NPILAVLLNRRGAIL 244


>ref|XP_004303372.1| PREDICTED: pre-mRNA-splicing factor rse-1-like [Fragaria vesca
           subsp. vesca]
          Length = 1396

 Score =  102 bits (253), Expect = 7e-20
 Identities = 48/89 (53%), Positives = 69/89 (77%)
 Frame = +2

Query: 2   GSVVAVSAYKDRLALFSISMSAGNNVVDKKLFYPPENEGNTINAQDIHRTSVRGTIWSMC 181
           G  +A SAY DRLA+FS+SMS G++++DKK+ YPPEN+ + +NA  + + S+ GTIWSM 
Sbjct: 160 GCFIAASAYVDRLAMFSVSMSGGSDIIDKKIVYPPEND-DDVNAARVQKNSISGTIWSMS 218

Query: 182 FIPKDVSQLSKDGYSPVLAIVINRNGAVL 268
           FI +D +Q    G++P+LA+VINR+GAVL
Sbjct: 219 FISQDPNQ--SKGHNPILAVVINRSGAVL 245


>gb|EXB29323.1| DNA damage-binding protein 1b [Morus notabilis]
          Length = 1388

 Score =  101 bits (252), Expect = 9e-20
 Identities = 46/84 (54%), Positives = 67/84 (79%)
 Frame = +2

Query: 2   GSVVAVSAYKDRLALFSISMSAGNNVVDKKLFYPPENEGNTINAQDIHRTSVRGTIWSMC 181
           GS +A SAY+++LA+FS+S+SAG++++DK++ YPPENEG+    + + + S+ GTIW MC
Sbjct: 159 GSFIAASAYENQLAMFSVSVSAGSDIIDKRIVYPPENEGDLSITRSVQKNSINGTIWGMC 218

Query: 182 FIPKDVSQLSKDGYSPVLAIVINR 253
           FI KD SQ SK G +PVLAI++NR
Sbjct: 219 FISKDPSQPSK-GNNPVLAILLNR 241


>ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus communis]
           gi|223528782|gb|EEF30789.1| spliceosomal protein sap,
           putative [Ricinus communis]
          Length = 1220

 Score =  101 bits (251), Expect = 1e-19
 Identities = 45/89 (50%), Positives = 71/89 (79%)
 Frame = +2

Query: 2   GSVVAVSAYKDRLALFSISMSAGNNVVDKKLFYPPENEGNTINAQDIHRTSVRGTIWSMC 181
           G  +A SAY DRLALFS+S++  ++++D+++FYPPE+EG+T   + I R ++ GTIWS+C
Sbjct: 159 GCFIATSAYVDRLALFSLSITGSSDIIDEQIFYPPESEGHTSFTRSIQRPNISGTIWSIC 218

Query: 182 FIPKDVSQLSKDGYSPVLAIVINRNGAVL 268
           FI +D+SQ SK+ ++PVLAI++NR+  +L
Sbjct: 219 FISRDLSQSSKE-HNPVLAIILNRSSELL 246


>ref|XP_006481687.1| PREDICTED: uncharacterized protein LOC102624787 isoform X3 [Citrus
           sinensis]
          Length = 1182

 Score =  100 bits (249), Expect = 2e-19
 Identities = 47/89 (52%), Positives = 70/89 (78%)
 Frame = +2

Query: 2   GSVVAVSAYKDRLALFSISMSAGNNVVDKKLFYPPENEGNTINAQDIHRTSVRGTIWSMC 181
           G ++AVSAY+DRL LFS+SMS+G++++DKK+ YP E+E +T  ++   + S+ GTIWSMC
Sbjct: 164 GCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMC 223

Query: 182 FIPKDVSQLSKDGYSPVLAIVINRNGAVL 268
           FI  D  Q SK+ ++P+LAI++NR GA+L
Sbjct: 224 FISTDPRQPSKE-HNPILAIILNRRGALL 251


>ref|XP_006481686.1| PREDICTED: uncharacterized protein LOC102624787 isoform X2 [Citrus
           sinensis]
          Length = 1265

 Score =  100 bits (249), Expect = 2e-19
 Identities = 47/89 (52%), Positives = 70/89 (78%)
 Frame = +2

Query: 2   GSVVAVSAYKDRLALFSISMSAGNNVVDKKLFYPPENEGNTINAQDIHRTSVRGTIWSMC 181
           G ++AVSAY+DRL LFS+SMS+G++++DKK+ YP E+E +T  ++   + S+ GTIWSMC
Sbjct: 35  GCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMC 94

Query: 182 FIPKDVSQLSKDGYSPVLAIVINRNGAVL 268
           FI  D  Q SK+ ++P+LAI++NR GA+L
Sbjct: 95  FISTDPRQPSKE-HNPILAIILNRRGALL 122


>ref|XP_006481685.1| PREDICTED: uncharacterized protein LOC102624787 isoform X1 [Citrus
           sinensis]
          Length = 1394

 Score =  100 bits (249), Expect = 2e-19
 Identities = 47/89 (52%), Positives = 70/89 (78%)
 Frame = +2

Query: 2   GSVVAVSAYKDRLALFSISMSAGNNVVDKKLFYPPENEGNTINAQDIHRTSVRGTIWSMC 181
           G ++AVSAY+DRL LFS+SMS+G++++DKK+ YP E+E +T  ++   + S+ GTIWSMC
Sbjct: 164 GCLIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIAQKNSISGTIWSMC 223

Query: 182 FIPKDVSQLSKDGYSPVLAIVINRNGAVL 268
           FI  D  Q SK+ ++P+LAI++NR GA+L
Sbjct: 224 FISTDPRQPSKE-HNPILAIILNRRGALL 251


>ref|XP_006577114.1| PREDICTED: splicing factor 3B subunit 3-like isoform X3 [Glycine
           max]
          Length = 1226

 Score =  100 bits (248), Expect = 3e-19
 Identities = 48/89 (53%), Positives = 69/89 (77%)
 Frame = +2

Query: 2   GSVVAVSAYKDRLALFSISMSAGNNVVDKKLFYPPENEGNTINAQDIHRTSVRGTIWSMC 181
           G  +A SAY+DRLALFS+SMS+G+ ++D+++ YP ENEG    ++ I R  +RGTIWS+C
Sbjct: 162 GCFIASSAYEDRLALFSLSMSSGD-IIDERIVYPSENEGTASTSRSIQRIGIRGTIWSIC 220

Query: 182 FIPKDVSQLSKDGYSPVLAIVINRNGAVL 268
           FI +D  Q SK+ ++PVLA++INR GA+L
Sbjct: 221 FISQDSRQPSKE-HNPVLAVIINRRGALL 248


>ref|XP_006577113.1| PREDICTED: splicing factor 3B subunit 3-like isoform X2 [Glycine
           max]
          Length = 1373

 Score =  100 bits (248), Expect = 3e-19
 Identities = 48/89 (53%), Positives = 69/89 (77%)
 Frame = +2

Query: 2   GSVVAVSAYKDRLALFSISMSAGNNVVDKKLFYPPENEGNTINAQDIHRTSVRGTIWSMC 181
           G  +A SAY+DRLALFS+SMS+G+ ++D+++ YP ENEG    ++ I R  +RGTIWS+C
Sbjct: 162 GCFIASSAYEDRLALFSLSMSSGD-IIDERIVYPSENEGTASTSRSIQRIGIRGTIWSIC 220

Query: 182 FIPKDVSQLSKDGYSPVLAIVINRNGAVL 268
           FI +D  Q SK+ ++PVLA++INR GA+L
Sbjct: 221 FISQDSRQPSKE-HNPVLAVIINRRGALL 248


>ref|XP_006577112.1| PREDICTED: splicing factor 3B subunit 3-like isoform X1 [Glycine
           max]
          Length = 1387

 Score =  100 bits (248), Expect = 3e-19
 Identities = 48/89 (53%), Positives = 69/89 (77%)
 Frame = +2

Query: 2   GSVVAVSAYKDRLALFSISMSAGNNVVDKKLFYPPENEGNTINAQDIHRTSVRGTIWSMC 181
           G  +A SAY+DRLALFS+SMS+G+ ++D+++ YP ENEG    ++ I R  +RGTIWS+C
Sbjct: 162 GCFIASSAYEDRLALFSLSMSSGD-IIDERIVYPSENEGTASTSRSIQRIGIRGTIWSIC 220

Query: 182 FIPKDVSQLSKDGYSPVLAIVINRNGAVL 268
           FI +D  Q SK+ ++PVLA++INR GA+L
Sbjct: 221 FISQDSRQPSKE-HNPVLAVIINRRGALL 248


>ref|XP_006429954.1| hypothetical protein CICLE_v10011020mg [Citrus clementina]
           gi|557532011|gb|ESR43194.1| hypothetical protein
           CICLE_v10011020mg [Citrus clementina]
          Length = 926

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 46/89 (51%), Positives = 68/89 (76%)
 Frame = +2

Query: 2   GSVVAVSAYKDRLALFSISMSAGNNVVDKKLFYPPENEGNTINAQDIHRTSVRGTIWSMC 181
           G  +AVSAY+DRL LFS+SMS+G++++DKK+ YP E+E +T  ++   +  + GTIWSMC
Sbjct: 164 GCFIAVSAYEDRLGLFSLSMSSGSDIIDKKICYPSESEVDTSASRIAQKNRISGTIWSMC 223

Query: 182 FIPKDVSQLSKDGYSPVLAIVINRNGAVL 268
           FI  D  Q SK+ ++P+LAI++NR GA+L
Sbjct: 224 FISTDPRQPSKE-HNPILAIILNRRGALL 251