BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00025096
         (385 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356764.1| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27
ref|XP_006849644.1| hypothetical protein AMTR_s00024p00225420 [A...    93   3e-17
ref|XP_002521664.1| pentatricopeptide repeat-containing protein,...    91   2e-16
ref|XP_004231338.1| PREDICTED: pentatricopeptide repeat-containi...    90   4e-16
ref|XP_006591720.1| PREDICTED: pentatricopeptide repeat-containi...    86   4e-15
gb|EXB96697.1| hypothetical protein L484_011738 [Morus notabilis]      86   5e-15
ref|XP_006435103.1| hypothetical protein CICLE_v10000322mg [Citr...    86   7e-15
ref|XP_002522388.1| pentatricopeptide repeat-containing protein,...    86   7e-15
ref|XP_004498123.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    84   2e-14
ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat...    84   2e-14
ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
gb|EYU35808.1| hypothetical protein MIMGU_mgv1a021697mg, partial...    84   3e-14
ref|XP_004296321.1| PREDICTED: pentatricopeptide repeat-containi...    84   3e-14
ref|XP_006837084.1| hypothetical protein AMTR_s00110p00099550 [A...    83   4e-14
ref|XP_007034693.1| Pentatricopeptide repeat (PPR) superfamily p...    83   4e-14
ref|XP_007203614.1| hypothetical protein PRUPE_ppa002292mg [Prun...    83   4e-14
ref|XP_006603121.1| PREDICTED: pentatricopeptide repeat-containi...    83   5e-14
ref|XP_006583750.1| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14
ref|XP_002866756.1| pentatricopeptide repeat-containing protein ...    82   6e-14

>ref|XP_006356764.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Solanum tuberosum]
          Length = 699

 Score =  127 bits (319), Expect = 2e-27
 Identities = 63/127 (49%), Positives = 89/127 (70%)
 Frame = +3

Query: 3   QVHAIIISLLGYLDLENSKAKEDVVTVIRSALINMYCKCSNVREAQKVFERLPPAQHVSH 182
           QVH + I+L+     + +   ++   +I SALI+MY KCS++ +A+KVFE   P +H   
Sbjct: 317 QVHGLFITLVN--SYKTACLLKESRAIIGSALIDMYGKCSDIGKARKVFESWLPERHAPL 374

Query: 183 WNSMITGYIDNGLLEDAIACFEEMPEKNVVSWTLMISGYVQYGLPREGIRLLANMCNNEN 362
           WNS+++GYI+NGL+EDA A FE MPEK +VSWT M++GYVQ GLPREG+ LLA M + E 
Sbjct: 375 WNSLLSGYINNGLIEDAKALFEHMPEKTIVSWTSMMTGYVQKGLPREGLNLLAKMYSGEE 434

Query: 363 GHGVQGN 383
              ++GN
Sbjct: 435 RDRLEGN 441


>ref|XP_006849644.1| hypothetical protein AMTR_s00024p00225420 [Amborella trichopoda]
           gi|548853219|gb|ERN11225.1| hypothetical protein
           AMTR_s00024p00225420 [Amborella trichopoda]
          Length = 784

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 47/88 (53%), Positives = 60/88 (68%)
 Frame = +3

Query: 84  IRSALINMYCKCSNVREAQKVFERLPPAQHVSHWNSMITGYIDNGLLEDAIACFEEMPEK 263
           I S LI+MY KC   +EA+ VFE +P    VS WNSMI G   NGL+E+A+  FE+MPE+
Sbjct: 370 IGSPLIDMYAKCGKTKEAKMVFEMIPEKNTVS-WNSMIAGLSHNGLVEEALQLFEQMPER 428

Query: 264 NVVSWTLMISGYVQYGLPREGIRLLANM 347
           NVVSW  +ISGYVQ  L  +G+ L + M
Sbjct: 429 NVVSWNAIISGYVQNELCEQGLELYSVM 456


>ref|XP_002521664.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539055|gb|EEF40651.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 574

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 46/115 (40%), Positives = 68/115 (59%)
 Frame = +3

Query: 3   QVHAIIISLLGYLDLENSKAKEDVVTVIRSALINMYCKCSNVREAQKVFERLPPAQHVSH 182
           QVHA I+          +    D    + +AL+ +Y KC  V EAQ+VF  +P    VS 
Sbjct: 314 QVHAYILKT-------EAMPSPDFSLPVNNALVTLYWKCGKVDEAQEVFNNMPVRDLVS- 365

Query: 183 WNSMITGYIDNGLLEDAIACFEEMPEKNVVSWTLMISGYVQYGLPREGIRLLANM 347
           WN++++GY++ G +++A   FEEMPEKN++SW +MISG  Q G   EG++L   M
Sbjct: 366 WNTILSGYLNAGRMDEAKTFFEEMPEKNILSWVVMISGLAQNGFGEEGLKLFNQM 420



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 9/100 (9%)
 Frame = +3

Query: 75  VTVIRSALINMYCKCSN---------VREAQKVFERLPPAQHVSHWNSMITGYIDNGLLE 227
           VT + +ALI++Y KC++         +  A+++F+ +P    +S W ++ITGY+ N  L+
Sbjct: 186 VTSVLNALISVYVKCASSPSVISSSLMGAARRLFDEMPVRDELS-WTTIITGYVKNDDLD 244

Query: 228 DAIACFEEMPEKNVVSWTLMISGYVQYGLPREGIRLLANM 347
            A   F+ M EK VV W  MISGY+  GL +E + +   M
Sbjct: 245 AAREVFDGMREKLVVVWNAMISGYMHRGLYQEALEMFRKM 284


>ref|XP_004231338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Solanum lycopersicum]
          Length = 625

 Score = 89.7 bits (221), Expect = 4e-16
 Identities = 41/93 (44%), Positives = 65/93 (69%)
 Frame = +3

Query: 84  IRSALINMYCKCSNVREAQKVFERLPPAQHVSHWNSMITGYIDNGLLEDAIACFEEMPEK 263
           + ++L++MY KC ++ +A+K+F+ +P  + VS WN +I GY+ +GL +DA   FEEMP +
Sbjct: 154 VGTSLVDMYVKCGDLIDARKLFDEMP-VRDVSAWNVLIAGYMKDGLFKDAEELFEEMPIR 212

Query: 264 NVVSWTLMISGYVQYGLPREGIRLLANMCNNEN 362
           N+VSWT MISGY Q GL  E ++L   M + ++
Sbjct: 213 NIVSWTAMISGYAQNGLADESLQLFDKMLDPDS 245


>ref|XP_006591720.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g62890-like [Glycine max]
          Length = 353

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 41/88 (46%), Positives = 56/88 (63%)
 Frame = +3

Query: 84  IRSALINMYCKCSNVREAQKVFERLPPAQHVSHWNSMITGYIDNGLLEDAIACFEEMPEK 263
           +R+ALI  YC CS V  A++VFE       V  WNSM+ GY+ NG +  A   F+EMPE+
Sbjct: 103 VRNALIQFYCDCSRVGSAKRVFEEDTLCSDVVTWNSMLAGYVRNGEVRFAEKMFDEMPER 162

Query: 264 NVVSWTLMISGYVQYGLPREGIRLLANM 347
           +VVSW+ MI+GYV  GL  +G+    +M
Sbjct: 163 DVVSWSTMITGYVLNGLLEDGLECFRDM 190



 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 30/67 (44%), Positives = 44/67 (65%)
 Frame = +3

Query: 69  DVVTVIRSALINMYCKCSNVREAQKVFERLPPAQHVSHWNSMITGYIDNGLLEDAIACFE 248
           DVVT   ++++  Y +   VR A+K+F+ +P    VS W++MITGY+ NGLLED + CF 
Sbjct: 132 DVVTW--NSMLAGYVRNGEVRFAEKMFDEMPERDVVS-WSTMITGYVLNGLLEDGLECFR 188

Query: 249 EMPEKNV 269
           +M E  V
Sbjct: 189 DMRETKV 195


>gb|EXB96697.1| hypothetical protein L484_011738 [Morus notabilis]
          Length = 610

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 41/93 (44%), Positives = 61/93 (65%)
 Frame = +3

Query: 69  DVVTVIRSALINMYCKCSNVREAQKVFERLPPAQHVSHWNSMITGYIDNGLLEDAIACFE 248
           ++  ++R+AL++MY KC N++ AQ +F+R+     VS W S++T Y  NGL+E A   F+
Sbjct: 221 EIDQIVRNALLDMYAKCGNLQSAQTIFDRMSDKNVVS-WTSVVTAYAKNGLVESAKEFFD 279

Query: 249 EMPEKNVVSWTLMISGYVQYGLPREGIRLLANM 347
           +MP KNVVSW  MIS YV+ G  +E + L   M
Sbjct: 280 QMPVKNVVSWNAMISCYVREGQFKEALDLFQEM 312


>ref|XP_006435103.1| hypothetical protein CICLE_v10000322mg [Citrus clementina]
           gi|557537225|gb|ESR48343.1| hypothetical protein
           CICLE_v10000322mg [Citrus clementina]
          Length = 799

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 43/115 (37%), Positives = 69/115 (60%)
 Frame = +3

Query: 3   QVHAIIISLLGYLDLENSKAKEDVVTVIRSALINMYCKCSNVREAQKVFERLPPAQHVSH 182
           QVHA       YL    +K   +    + +AL+ +Y KC  V EA+ +F ++P    VS 
Sbjct: 312 QVHA-------YLLRTEAKRTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVS- 363

Query: 183 WNSMITGYIDNGLLEDAIACFEEMPEKNVVSWTLMISGYVQYGLPREGIRLLANM 347
           WN++++ Y+  GL+++A + FE M E+N++SWT+MISG  Q G   EG++L + M
Sbjct: 364 WNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQM 418



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
 Frame = +3

Query: 57  KAKEDVVTVIRSALINMYCKC---------SNVREAQKVFERLPPAQHVSHWNSMITGYI 209
           K+   + T + +ALI++Y KC         S +  A++VF+ +P    +S W +M+TGY+
Sbjct: 178 KSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELS-WTTMMTGYV 236

Query: 210 DNGLLEDAIACFEEMPEKNVVSWTLMISGYVQYGLPREGIRLLANM 347
            N  L+ A    + M E   V+W  +ISGYV   L +E + +   M
Sbjct: 237 KNDYLDAAREFLDGMSENVGVAWNALISGYVHRELYQEALEMFRKM 282


>ref|XP_002522388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538466|gb|EEF40072.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 472

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 46/89 (51%), Positives = 58/89 (65%)
 Frame = +3

Query: 81  VIRSALINMYCKCSNVREAQKVFERLPPAQHVSHWNSMITGYIDNGLLEDAIACFEEMPE 260
           V R+ALI+MY KC  +  A++VF+++P    VS W SMIT Y   GL+E A   F++MPE
Sbjct: 225 VARNALIDMYAKCGALVLAERVFQQMPNKNVVS-WTSMITAYAKQGLVEYARKSFDQMPE 283

Query: 261 KNVVSWTLMISGYVQYGLPREGIRLLANM 347
           KNVVSW  MIS YVQ G  RE + L   M
Sbjct: 284 KNVVSWNSMISSYVQGGQCREALDLFHEM 312


>ref|XP_004498123.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g35030, mitochondrial-like [Cicer arietinum]
          Length = 665

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 41/90 (45%), Positives = 60/90 (66%)
 Frame = +3

Query: 90  SALINMYCKCSNVREAQKVFERLPPAQHVSHWNSMITGYIDNGLLEDAIACFEEMPEKNV 269
           +A+I  Y +   + EA K+FER+P     S WN+MITG+I NG L  A   F+EMP+KNV
Sbjct: 240 NAMITGYAQNGRLDEALKLFERMPERDMPS-WNTMITGFIQNGDLNRAEKLFDEMPQKNV 298

Query: 270 VSWTLMISGYVQYGLPREGIRLLANMCNNE 359
           ++WT M++GYVQ+GL  E +++   M  N+
Sbjct: 299 ITWTSMMTGYVQHGLSEEALKIFNKMQAND 328



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 33/86 (38%), Positives = 53/86 (61%)
 Frame = +3

Query: 90  SALINMYCKCSNVREAQKVFERLPPAQHVSHWNSMITGYIDNGLLEDAIACFEEMPEKNV 269
           + +I+ Y KC  ++EA+K+F+R    ++V  W +M++GY+    +E+A   F EMP +NV
Sbjct: 84  TTMISGYIKCGMIKEARKLFDRSDAEKNVIVWTAMVSGYVKLNRIEEAERLFYEMPVRNV 143

Query: 270 VSWTLMISGYVQYGLPREGIRLLANM 347
           VSW  MI GY + G  +E + L   M
Sbjct: 144 VSWNTMIDGYARNGRTQEALDLFRRM 169



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 31/88 (35%), Positives = 56/88 (63%)
 Frame = +3

Query: 48  ENSKAKEDVVTVIRSALINMYCKCSNVREAQKVFERLPPAQHVSHWNSMITGYIDNGLLE 227
           + S A+++V+  + +A+++ Y K + + EA+++F  +P  ++V  WN+MI GY  NG  +
Sbjct: 104 DRSDAEKNVI--VWTAMVSGYVKLNRIEEAERLFYEMP-VRNVVSWNTMIDGYARNGRTQ 160

Query: 228 DAIACFEEMPEKNVVSWTLMISGYVQYG 311
           +A+  F  MPE+NVVSW  +I+     G
Sbjct: 161 EALDLFRRMPERNVVSWNTIITALAHSG 188



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 35/103 (33%), Positives = 54/103 (52%)
 Frame = +3

Query: 39  LDLENSKAKEDVVTVIRSALINMYCKCSNVREAQKVFERLPPAQHVSHWNSMITGYIDNG 218
           LDL     + +VV+   + +I        + +AQ +F ++     VS W +M+ G   NG
Sbjct: 163 LDLFRRMPERNVVSW--NTIITALAHSGRIDDAQGIFSKMQERDVVS-WTTMVAGLSKNG 219

Query: 219 LLEDAIACFEEMPEKNVVSWTLMISGYVQYGLPREGIRLLANM 347
            ++DA   F+ MP +NVVSW  MI+GY Q G   E ++L   M
Sbjct: 220 RIDDARELFDRMPVRNVVSWNAMITGYAQNGRLDEALKLFERM 262



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
 Frame = +3

Query: 99  INMYCKCSNVREAQKVFERLPPAQHVSHWNSMITGYIDNGLLEDAIACFEEM-PEKNVVS 275
           I+  CK   + EA+KVF+ +   + +  W +MI+GYI  G++++A   F+    EKNV+ 
Sbjct: 56  ISSLCKQGKIDEARKVFDEMSE-RDICLWTTMISGYIKCGMIKEARKLFDRSDAEKNVIV 114

Query: 276 WTLMISGYVQYGLPREGIRLLANM 347
           WT M+SGYV+     E  RL   M
Sbjct: 115 WTAMVSGYVKLNRIEEAERLFYEM 138


>ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 642

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 38/94 (40%), Positives = 61/94 (64%)
 Frame = +3

Query: 84  IRSALINMYCKCSNVREAQKVFERLPPAQHVSHWNSMITGYIDNGLLEDAIACFEEMPEK 263
           + ++LI +Y KC  + +A KVF+ +   + VS WN+++ GY  +G ++ A+A FE MP +
Sbjct: 171 VATSLIILYGKCGEINDAGKVFDNMT-IRDVSSWNALLAGYTKSGCIDAALAIFERMPWR 229

Query: 264 NVVSWTLMISGYVQYGLPREGIRLLANMCNNENG 365
           N+VSWT MISGY Q GL ++ + L   M   ++G
Sbjct: 230 NIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSG 263


>ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cucumis sativus]
          Length = 679

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 38/94 (40%), Positives = 61/94 (64%)
 Frame = +3

Query: 84  IRSALINMYCKCSNVREAQKVFERLPPAQHVSHWNSMITGYIDNGLLEDAIACFEEMPEK 263
           + ++LI +Y KC  + +A KVF+ +   + VS WN+++ GY  +G ++ A+A FE MP +
Sbjct: 208 VATSLIILYGKCGEINDAGKVFDNMT-IRDVSSWNALLAGYTKSGCIDAALAIFERMPWR 266

Query: 264 NVVSWTLMISGYVQYGLPREGIRLLANMCNNENG 365
           N+VSWT MISGY Q GL ++ + L   M   ++G
Sbjct: 267 NIVSWTTMISGYSQSGLAQQALSLFDEMVKEDSG 300


>ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 43/115 (37%), Positives = 69/115 (60%)
 Frame = +3

Query: 3   QVHAIIISLLGYLDLENSKAKEDVVTVIRSALINMYCKCSNVREAQKVFERLPPAQHVSH 182
           QVHA I+           +   D    + +AL  +Y KC  V EA++VF ++P    VS 
Sbjct: 312 QVHAYILRT-------EPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVS- 363

Query: 183 WNSMITGYIDNGLLEDAIACFEEMPEKNVVSWTLMISGYVQYGLPREGIRLLANM 347
           WN++++GY++ G +++A + FEEMPE+N+++WT+MISG  Q G   E ++L   M
Sbjct: 364 WNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRM 418



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
 Frame = +3

Query: 57  KAKEDVVTVIRSALINMYCKCSN---------VREAQKVFERLPPAQHVSHWNSMITGYI 209
           K+    VT + +AL++++ KC++         +  A+K+F+ +     +S W +MI GY+
Sbjct: 178 KSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELS-WTTMIAGYV 236

Query: 210 DNGLLEDAIACFEEMPEKNVVSWTLMISGYVQYGLPREGIRLLANM 347
            NG L+ A    + M EK VV+W  MISGYV +G   E + +   M
Sbjct: 237 RNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKM 282


>gb|EYU35808.1| hypothetical protein MIMGU_mgv1a021697mg, partial [Mimulus
           guttatus]
          Length = 598

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 38/89 (42%), Positives = 60/89 (67%)
 Frame = +3

Query: 81  VIRSALINMYCKCSNVREAQKVFERLPPAQHVSHWNSMITGYIDNGLLEDAIACFEEMPE 260
           V+++A++++Y  C N+R+A  VF+ +P    V+ WN+MIT  + +G +  A   F +MPE
Sbjct: 130 VLQNAILHLYASCGNIRDAYLVFDNMPQRDIVT-WNTMITQLVKSGDINSAYEMFLQMPE 188

Query: 261 KNVVSWTLMISGYVQYGLPREGIRLLANM 347
           +NV SWT +ISG+VQ G P+E I L + M
Sbjct: 189 RNVRSWTAIISGFVQCGKPKEAIELFSKM 217


>ref|XP_004296321.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 465

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 38/84 (45%), Positives = 58/84 (69%)
 Frame = +3

Query: 96  LINMYCKCSNVREAQKVFERLPPAQHVSHWNSMITGYIDNGLLEDAIACFEEMPEKNVVS 275
           ++N+Y  C  VR+A+K+F+++P    V+ WN+M+T  +  G +E+A   F  MPE+NV S
Sbjct: 2   ILNLYALCGEVRDARKMFDKMPQRDVVT-WNTMMTVLVKRGDVEEAYDLFLRMPERNVRS 60

Query: 276 WTLMISGYVQYGLPREGIRLLANM 347
           WTLMISG+VQ G P+E +R+   M
Sbjct: 61  WTLMISGFVQRGKPKEAVRVFLEM 84


>ref|XP_006837084.1| hypothetical protein AMTR_s00110p00099550 [Amborella trichopoda]
           gi|548839677|gb|ERM99937.1| hypothetical protein
           AMTR_s00110p00099550 [Amborella trichopoda]
          Length = 683

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 40/88 (45%), Positives = 58/88 (65%)
 Frame = +3

Query: 84  IRSALINMYCKCSNVREAQKVFERLPPAQHVSHWNSMITGYIDNGLLEDAIACFEEMPEK 263
           + SAL+  Y KC ++ EA+KVFE +P  + V  WN+M+ GY+ +G +ED I  FEE+P K
Sbjct: 153 VGSALVEFYGKCGDIDEARKVFESMPDRE-VFSWNTMLLGYVQSGRIEDGILFFEEIPCK 211

Query: 264 NVVSWTLMISGYVQYGLPREGIRLLANM 347
           NVVSWT +ISG V+ G   + I   + +
Sbjct: 212 NVVSWTTIISGCVRCGWRDKAIHFFSGL 239



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = +3

Query: 81  VIRSALINMYCKCSNVREAQKVFERLPPAQH-VSHWNSMITGYIDNGLLEDAIACFEEMP 257
           V+ ++LI+MY KC ++  A   F  +   QH V  W +++  Y+  G+ E A   FE+MP
Sbjct: 516 VVGTSLIDMYGKCRDMDHALCAFSTI--TQHSVFSWTALLGSYVKCGMWESANELFEKMP 573

Query: 258 EKNVVSWTLMISGYVQYGLPREGIRLLANM 347
           EKN+VSW  M+SG+ Q G   E I+L + M
Sbjct: 574 EKNIVSWNTMLSGHAQNGSGFEAIKLYSLM 603


>ref|XP_007034693.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508713722|gb|EOY05619.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 788

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 41/115 (35%), Positives = 68/115 (59%)
 Frame = +3

Query: 3   QVHAIIISLLGYLDLENSKAKEDVVTVIRSALINMYCKCSNVREAQKVFERLPPAQHVSH 182
           QVHA ++   G       K   D    + +AL+ +Y KC  V  A++VF  +P    VS 
Sbjct: 301 QVHAYVLRTEG-------KPTPDFSLPVNNALVTLYWKCDKVDWAREVFNNMPVRDLVS- 352

Query: 183 WNSMITGYIDNGLLEDAIACFEEMPEKNVVSWTLMISGYVQYGLPREGIRLLANM 347
           WN++++GY++ G +++ ++ F EMPE+N+++W +MISG  Q G   EG++L   M
Sbjct: 353 WNAILSGYVNAGRIDEGMSFFREMPERNLLTWIVMISGLAQNGFGEEGLKLFNQM 407



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 33/91 (36%), Positives = 54/91 (59%)
 Frame = +3

Query: 75  VTVIRSALINMYCKCSNVREAQKVFERLPPAQHVSHWNSMITGYIDNGLLEDAIACFEEM 254
           VT + +AL+++Y  C+ + EA+K+F+ +     +S W +M+TGY+ N  L+ A    + M
Sbjct: 182 VTSVLNALVSVYVNCTLMFEARKLFDEMSEKDELS-WTTMVTGYVKNDELDAARELVDGM 240

Query: 255 PEKNVVSWTLMISGYVQYGLPREGIRLLANM 347
            EK  V+W  MISGYV +G   E + +   M
Sbjct: 241 NEKLAVAWNAMISGYVHHGRYEEALDMFRKM 271


>ref|XP_007203614.1| hypothetical protein PRUPE_ppa002292mg [Prunus persica]
           gi|462399145|gb|EMJ04813.1| hypothetical protein
           PRUPE_ppa002292mg [Prunus persica]
          Length = 691

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 42/93 (45%), Positives = 62/93 (66%)
 Frame = +3

Query: 84  IRSALINMYCKCSNVREAQKVFERLPPAQHVSHWNSMITGYIDNGLLEDAIACFEEMPEK 263
           I + LI++Y KC ++ +AQKVF+ +      S WN+MI+GY   GLL +A   F+EMPEK
Sbjct: 122 ICNRLIDLYAKCGSLVDAQKVFDEMSERDLCS-WNTMISGYAKVGLLGEARKLFDEMPEK 180

Query: 264 NVVSWTLMISGYVQYGLPREGIRLLANMCNNEN 362
           +  SWT MISGYV++  P+E ++L   M  ++N
Sbjct: 181 DNFSWTAMISGYVRHERPKEALQLYRMMQRHDN 213


>ref|XP_006603121.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Glycine max]
          Length = 294

 Score = 82.8 bits (203), Expect = 5e-14
 Identities = 39/82 (47%), Positives = 56/82 (68%)
 Frame = +3

Query: 84  IRSALINMYCKCSNVREAQKVFERLPPAQHVSHWNSMITGYIDNGLLEDAIACFEEMPEK 263
           +R+ALI++YC+CS V  A++VF        V  WNSM+ G + NG +  A   F+EMPE+
Sbjct: 153 VRNALIHLYCECSCVDSAKRVFAEDTLCSDVVTWNSMLAGAVRNGEVRFAEKMFDEMPER 212

Query: 264 NVVSWTLMISGYVQYGLPREGI 329
           +VVSW+ MI+GYVQ GL  +G+
Sbjct: 213 DVVSWSTMITGYVQNGLLEDGV 234


>ref|XP_006583750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g31430-like isoform X1 [Glycine max]
          Length = 621

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 38/93 (40%), Positives = 61/93 (65%)
 Frame = +3

Query: 69  DVVTVIRSALINMYCKCSNVREAQKVFERLPPAQHVSHWNSMITGYIDNGLLEDAIACFE 248
           D+ T++ +AL++MYCKC +V  A+++F+ +   ++V+ W SM+TGY+  G L+ A   FE
Sbjct: 248 DLTTIMGNALLDMYCKCGHVSVAREIFDAMT-VKNVNCWTSMVTGYVICGQLDQARNLFE 306

Query: 249 EMPEKNVVSWTLMISGYVQYGLPREGIRLLANM 347
             P +++V WT MI+GYVQ+    E I L   M
Sbjct: 307 RSPSRDIVLWTAMINGYVQFNRFEETIALFGEM 339


>ref|XP_002866756.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312591|gb|EFH43015.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 649

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 49/119 (41%), Positives = 69/119 (57%)
 Frame = +3

Query: 3   QVHAIIISLLGYLDLENSKAKEDVVTVIRSALINMYCKCSNVREAQKVFERLPPAQHVSH 182
           Q+HA I  L GY        + DV  V  ++LIN Y    N + A  +F+R+P    VS 
Sbjct: 165 QIHAQITKL-GY--------ENDVYAV--NSLINSYAATGNFKLAHLLFDRIPKPDAVS- 212

Query: 183 WNSMITGYIDNGLLEDAIACFEEMPEKNVVSWTLMISGYVQYGLPREGIRLLANMCNNE 359
           WNS+I GY   G ++ A+  F +M EKN +SWT MISGYVQ G+ +E ++L   M N++
Sbjct: 213 WNSVIKGYAKAGKMDIALTLFRKMVEKNAISWTTMISGYVQAGMHKEALQLFHEMQNSD 271