BLASTX nr result

ID: Cocculus22_contig00024896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00024896
         (406 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34809.3| unnamed protein product [Vitis vinifera]               72   8e-11
ref|XP_003631396.1| PREDICTED: armadillo repeat-containing kines...    70   2e-10
emb|CBI34812.3| unnamed protein product [Vitis vinifera]               70   2e-10

>emb|CBI34809.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
 Frame = -1

Query: 250 RIMASTGYRNGVAKGSMKLERTVAVNPSVKSTGVKAKPNP-SLASSGVRRSSPGSLGGTA 74
           ++ AS GYRNG  KG+MK++R V+++ + KS+ +K+KP+P S ASSG+RR+S GS+GG A
Sbjct: 71  KMAASGGYRNGTHKGNMKVDRLVSLSSATKSSSLKSKPSPASPASSGLRRNSTGSVGG-A 129

Query: 73  KDDASXXXXXXXXXXXXXRNAEEM 2
           KDDA              RNAEE+
Sbjct: 130 KDDAGVPGRVRVAVRLRPRNAEEL 153


>ref|XP_003631396.1| PREDICTED: armadillo repeat-containing kinesin-like protein 3-like
           [Vitis vinifera]
          Length = 779

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 41/80 (51%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
 Frame = -1

Query: 241 ASTGYRNGVAKGSMKLERTVAVNPSVKSTGVKAKPNP-SLASSGVRRSSPGSLGGTAKDD 65
           AS GYRNG  KG+MK++R V+++ + KS+ +K+KP+P S ASSG+RR+S GS+GG AKDD
Sbjct: 3   ASGGYRNGTHKGNMKVDRLVSLSSATKSSSLKSKPSPASPASSGLRRNSTGSVGG-AKDD 61

Query: 64  ASXXXXXXXXXXXXXRNAEE 5
           A              RNAEE
Sbjct: 62  AGVPGRVRVAVRLRPRNAEE 81


>emb|CBI34812.3| unnamed protein product [Vitis vinifera]
          Length = 774

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 41/80 (51%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
 Frame = -1

Query: 241 ASTGYRNGVAKGSMKLERTVAVNPSVKSTGVKAKPNP-SLASSGVRRSSPGSLGGTAKDD 65
           AS GYRNG  KG+MK++R V+++ + KS+ +K+KP+P S ASSG+RR+S GS+GG AKDD
Sbjct: 3   ASGGYRNGTHKGNMKVDRLVSLSSATKSSSLKSKPSPASPASSGLRRNSTGSVGG-AKDD 61

Query: 64  ASXXXXXXXXXXXXXRNAEE 5
           A              RNAEE
Sbjct: 62  AGVPGRVRVAVRLRPRNAEE 81


Top