BLASTX nr result

ID: Cocculus22_contig00024812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00024812
         (607 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62256.1| hypothetical protein VITISV_005395 [Vitis vinifera]    70   6e-10
ref|XP_002280853.1| PREDICTED: uncharacterized protein LOC100253...    69   1e-09

>emb|CAN62256.1| hypothetical protein VITISV_005395 [Vitis vinifera]
          Length = 669

 Score = 69.7 bits (169), Expect = 6e-10
 Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 7/163 (4%)
 Frame = -2

Query: 606 QLKPEQVKNLCKLFQITTRERGSMQVGRLGRLESRTLIDRYGIEERHQV-QQGVRHPAFG 430
           +L  +QVKNLCKLFQ  ++   S   GR  R E  T  DR   + R Q+ ++  RHP   
Sbjct: 391 ELNSDQVKNLCKLFQAASKGPKSKDSGRSLRGEGXTASDR---QRRTQLGREEERHPVLH 447

Query: 429 AVKPFPENTGLHERGVL----GSAALSSQLPVPLHSSLPTPSYAYE-GLPDPVYRRRDAE 265
             + + E   L+ER V      S  L + LP+P  +++P PSYAY+  L   VYRR    
Sbjct: 448 EDRLYKEPPALYEREVYTSPRASRPLHAPLPLPPAAAIPPPSYAYKRPLEMEVYRRE--P 505

Query: 264 FEHHHHRQPIEIGLGHREEVALSDPYI-LKGPTQSGESFYPMG 139
               + RQ +++ +  ++++   DPY+  + P  S +  Y  G
Sbjct: 506 LLGGYDRQHLDLEMRRQDDIEYRDPYVRYREPPFSHDLIYSGG 548


>ref|XP_002280853.1| PREDICTED: uncharacterized protein LOC100253495 [Vitis vinifera]
          Length = 517

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 7/163 (4%)
 Frame = -2

Query: 606 QLKPEQVKNLCKLFQITTRERGSMQVGRLGRLESRTLIDRYGIEERHQV-QQGVRHPAFG 430
           +L  +QVKNLCKLFQ  ++   S   GR  R E  T  DR   + R Q+ ++  RHP   
Sbjct: 239 ELNSDQVKNLCKLFQAASKGPKSKDSGRSLRGEGCTASDR---QRRTQLGREEERHPVLH 295

Query: 429 AVKPFPENTGLHERGVL----GSAALSSQLPVPLHSSLPTPSYAYE-GLPDPVYRRRDAE 265
             + + E   L+ER V      S  L + LP+P  +++P PSYAY+  L   VYRR    
Sbjct: 296 EDRLYKEPPALYEREVYTSPRASRPLHAPLPLPPAAAIPPPSYAYKRPLEMEVYRRE--P 353

Query: 264 FEHHHHRQPIEIGLGHREEVALSDPYI-LKGPTQSGESFYPMG 139
               + RQ +++ +  ++++   DPY+  + P  S +  Y  G
Sbjct: 354 LLGGYDRQHLDLEMRRQDDIEYRDPYVRYREPPFSHDLIYSGG 396


Top