BLASTX nr result

ID: Cocculus22_contig00024724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00024724
         (502 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003208050.1| putative polyprotein [Pelargonium vein bandi...    86   5e-15
ref|NP_758808.1| polyprotein [Taro bacilliform virus] gi|2581483...    84   3e-14
ref|YP_006495799.1| polyprotein [Gooseberry vein banding associa...    82   6e-14
gb|AEE39279.1| polyprotein [Gooseberry vein banding associated v...    82   6e-14
gb|AEE39276.1| polyprotein [Gooseberry vein banding associated v...    82   6e-14
gb|AEE39273.1| polyprotein [Gooseberry vein banding associated v...    82   6e-14
gb|AEE39270.1| polyprotein [Gooseberry vein banding associated v...    82   6e-14
ref|YP_610965.1| hypothetical protein DMV_gp3 [Dracaena mottle v...    82   8e-14
ref|YP_003284237.1| unnamed protein product [Sugarcane bacillifo...    82   1e-13
ref|NP_569153.1| poplyprotein [Citrus yellow mosaic virus] gi|16...    82   1e-13
gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]                81   1e-13
gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]                81   1e-13
gb|ACH86210.1| unknown [Citrus yellow mosaic virus]                    81   1e-13
pir||S11479 circular genome protein 3 - Commelina yellow mottle ...    81   2e-13
ref|NP_039820.1| polyprotein [Commelina yellow mottle virus] gi|...    81   2e-13
ref|XP_006858540.1| hypothetical protein AMTR_s00071p00160380 [A...    80   2e-13
ref|YP_002117531.1| ORF3 [Cycad leaf necrosis virus] gi|19439916...    80   2e-13
ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]...    80   3e-13
gb|AER00538.1| ORF III [Citrus yellow mosaic virus]                    80   3e-13
gb|AER00544.1| ORF III [Citrus yellow mosaic virus]                    79   5e-13

>ref|YP_003208050.1| putative polyprotein [Pelargonium vein banding virus]
           gi|258547408|gb|ACV74337.1| putative polyprotein
           [Pelargonium vein banding virus]
          Length = 1970

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 2/127 (1%)
 Frame = +3

Query: 9   GWDSKAV--LYGHYKEEPIKCSSGDSVELRLIERGSQSLLLKEHLNYIHLGCLVVRVKPL 182
           GW S  +  +Y HY EE I  S+G+ VEL  + R S   L +     IHLG +++RV  L
Sbjct: 284 GWSSTRLHRVYQHYSEERI-LSTGEQVELPFVTRRSYERLQRTGYQQIHLGLVLIRVHTL 342

Query: 183 HRNNLGTKVHFVLMDTNHLD*EQSSLVTLELDMNAGGGIIYFVPDYAKMTRDFYNHIRLG 362
           HR + G K   V  DT   D ++S + ++E+D++ G  + Y  PD      DFYNH+ + 
Sbjct: 343 HRRDAGVKALVVFRDTRWRD-DRSIIGSMEIDLSIGTQLAYIAPDMMMSIHDFYNHVEVV 401

Query: 363 TQTKGYK 383
             T+GY+
Sbjct: 402 VATRGYE 408


>ref|NP_758808.1| polyprotein [Taro bacilliform virus]
           gi|25814833|gb|AAN75640.1|AF357836_3 polyprotein [taro
           bacilliform virus]
          Length = 1881

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 44/123 (35%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
 Frame = +3

Query: 30  LYGHYKEEPIKCSS-GDSVELRLIERGSQSLLLKEHLNYIHLGCLVVRVKPLHRNNLGTK 206
           +Y HY EE I C+     + L  I   S   L +    ++H+G +++RV PLHR N GT 
Sbjct: 92  VYQHYSEERILCTGQNQQLNLPFINESSYRALRESGQQHLHIGLIMIRVHPLHRRNAGTT 151

Query: 207 VHFVLMDTNHLD*EQSSLVTLELDMNAGGGIIYFVPDYAKMTRDFYNHIRLGTQTKGYKM 386
              V  D    D ++S + T+E+D++AG  I+Y  P+      DFY +I+L  QT+GY+ 
Sbjct: 152 ALIVPRDIRWND-DRSIIGTMEIDLSAGSQIVYIAPNIMLSVEDFYRNIQLAIQTQGYEN 210

Query: 387 LHS 395
            +S
Sbjct: 211 WNS 213


>ref|YP_006495799.1| polyprotein [Gooseberry vein banding associated virus]
           gi|392856295|gb|AFM84639.1| polyprotein [Gooseberry vein
           banding associated virus]
          Length = 1910

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 43/117 (36%), Positives = 65/117 (55%)
 Frame = +3

Query: 30  LYGHYKEEPIKCSSGDSVELRLIERGSQSLLLKEHLNYIHLGCLVVRVKPLHRNNLGTKV 209
           +Y HY+E          ++LR IE  S   L+ E L +IHLG  +VR+  LHRN+ G + 
Sbjct: 99  VYQHYEERSAHVVDRQ-MDLRFIEEESYRRLVDEGLQFIHLGMGMVRIHMLHRNSAGIEA 157

Query: 210 HFVLMDTNHLD*EQSSLVTLELDMNAGGGIIYFVPDYAKMTRDFYNHIRLGTQTKGY 380
             V  DT   D ++  + ++ +DM  G  ++Y +PD      DFYNHI++  QT+GY
Sbjct: 158 MIVFRDTRWTD-DRQVIASMSVDMTHGSQLVYVIPDAMLSIHDFYNHIQVSIQTRGY 213


>gb|AEE39279.1| polyprotein [Gooseberry vein banding associated virus]
          Length = 1910

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 43/117 (36%), Positives = 65/117 (55%)
 Frame = +3

Query: 30  LYGHYKEEPIKCSSGDSVELRLIERGSQSLLLKEHLNYIHLGCLVVRVKPLHRNNLGTKV 209
           +Y HY+E          ++LR IE  S   L+ E L +IHLG  +VR+  LHRN+ G + 
Sbjct: 99  VYQHYEERSAHVVDRQ-MDLRFIEEESYRRLVDEGLQFIHLGMGMVRIHMLHRNSAGIEA 157

Query: 210 HFVLMDTNHLD*EQSSLVTLELDMNAGGGIIYFVPDYAKMTRDFYNHIRLGTQTKGY 380
             V  DT   D ++  + ++ +DM  G  ++Y +PD      DFYNHI++  QT+GY
Sbjct: 158 MIVFRDTRWTD-DRQVIASMSVDMTHGSQLVYVIPDAMLSIHDFYNHIQVSIQTRGY 213


>gb|AEE39276.1| polyprotein [Gooseberry vein banding associated virus]
          Length = 1910

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 43/117 (36%), Positives = 65/117 (55%)
 Frame = +3

Query: 30  LYGHYKEEPIKCSSGDSVELRLIERGSQSLLLKEHLNYIHLGCLVVRVKPLHRNNLGTKV 209
           +Y HY+E          ++LR IE  S   L+ E L +IHLG  +VR+  LHRN+ G + 
Sbjct: 99  VYQHYEERSAHVVDRQ-MDLRFIEEESYRRLVDEGLQFIHLGMGMVRIHMLHRNSAGIEA 157

Query: 210 HFVLMDTNHLD*EQSSLVTLELDMNAGGGIIYFVPDYAKMTRDFYNHIRLGTQTKGY 380
             V  DT   D ++  + ++ +DM  G  ++Y +PD      DFYNHI++  QT+GY
Sbjct: 158 MIVFRDTRWTD-DRQVIASMSVDMTHGSQLVYVIPDAMLSIHDFYNHIQVSIQTRGY 213


>gb|AEE39273.1| polyprotein [Gooseberry vein banding associated virus]
          Length = 1910

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 43/117 (36%), Positives = 65/117 (55%)
 Frame = +3

Query: 30  LYGHYKEEPIKCSSGDSVELRLIERGSQSLLLKEHLNYIHLGCLVVRVKPLHRNNLGTKV 209
           +Y HY+E          ++LR IE  S   L+ E L +IHLG  +VR+  LHRN+ G + 
Sbjct: 99  VYQHYEERSAHVVDRQ-MDLRFIEEESYRRLVDEGLQFIHLGMGMVRIHMLHRNSAGIEA 157

Query: 210 HFVLMDTNHLD*EQSSLVTLELDMNAGGGIIYFVPDYAKMTRDFYNHIRLGTQTKGY 380
             V  DT   D ++  + ++ +DM  G  ++Y +PD      DFYNHI++  QT+GY
Sbjct: 158 MIVFRDTRWTD-DRQVIASMSVDMTHGSQLVYVIPDAMLSIHDFYNHIQVSIQTRGY 213


>gb|AEE39270.1| polyprotein [Gooseberry vein banding associated virus]
          Length = 1910

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 43/117 (36%), Positives = 65/117 (55%)
 Frame = +3

Query: 30  LYGHYKEEPIKCSSGDSVELRLIERGSQSLLLKEHLNYIHLGCLVVRVKPLHRNNLGTKV 209
           +Y HY+E          ++LR IE  S   L+ E L +IHLG  +VR+  LHRN+ G + 
Sbjct: 99  VYQHYEERSAHVVDRQ-MDLRFIEEESYRRLVDEGLQFIHLGMGMVRIHMLHRNSAGIEA 157

Query: 210 HFVLMDTNHLD*EQSSLVTLELDMNAGGGIIYFVPDYAKMTRDFYNHIRLGTQTKGY 380
             V  DT   D ++  + ++ +DM  G  ++Y +PD      DFYNHI++  QT+GY
Sbjct: 158 MIVFRDTRWTD-DRQVIASMSVDMTHGSQLVYVIPDAMLSIHDFYNHIQVSIQTRGY 213


>ref|YP_610965.1| hypothetical protein DMV_gp3 [Dracaena mottle virus]
           gi|92430216|gb|ABE77344.1| hypothetical protein
           [Dracaena mottle virus]
          Length = 1916

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 1/126 (0%)
 Frame = +3

Query: 9   GWDSKA-VLYGHYKEEPIKCSSGDSVELRLIERGSQSLLLKEHLNYIHLGCLVVRVKPLH 185
           GW S    +Y HY E+ +    G  VEL  I   S   LL     +IH+G ++VRV  LH
Sbjct: 90  GWHSTVHKVYQHYDEQRVLVLEGQQVELPFINEQSYRQLLSSGFQHIHVGMVLVRVHALH 149

Query: 186 RNNLGTKVHFVLMDTNHLD*EQSSLVTLELDMNAGGGIIYFVPDYAKMTRDFYNHIRLGT 365
             + GT     L DT      +  + ++E+D+ AG  ++Y VPD     +DFYNHI +  
Sbjct: 150 SRHAGTMALLCLRDTRWKS-SRGIIGSMEVDLTAGSQLVYVVPDILLSVQDFYNHIEVVV 208

Query: 366 QTKGYK 383
            T GY+
Sbjct: 209 MTHGYQ 214


>ref|YP_003284237.1| unnamed protein product [Sugarcane bacilliform virus]
           gi|240114281|gb|ACS44708.1| ORF3 protein [Sugarcane
           bacilliform virus]
          Length = 1792

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 41/117 (35%), Positives = 62/117 (52%)
 Frame = +3

Query: 30  LYGHYKEEPIKCSSGDSVELRLIERGSQSLLLKEHLNYIHLGCLVVRVKPLHRNNLGTKV 209
           +Y H  EE +     D  +   I++ S   L +  L YIHLG L VR + LHR   GT  
Sbjct: 102 VYHHRSEERMLVLRNDQQDRTFIQQESYEALAQAGLEYIHLGVLQVRFQILHRRYAGTVA 161

Query: 210 HFVLMDTNHLD*EQSSLVTLELDMNAGGGIIYFVPDYAKMTRDFYNHIRLGTQTKGY 380
             V  DT   + ++S +  +E+D+  G  ++Y +PD     +DFY HI++  +TKGY
Sbjct: 162 FLVFRDTRWNEDDRSIIAAMEVDLAEGNQLVYVIPDIMMTIKDFYRHIQISIKTKGY 218


>ref|NP_569153.1| poplyprotein [Citrus yellow mosaic virus]
           gi|16416939|gb|AAL18495.1|AF347695_3 unknown [citrus
           yellow mosaic virus]
          Length = 1983

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 43/117 (36%), Positives = 65/117 (55%)
 Frame = +3

Query: 30  LYGHYKEEPIKCSSGDSVELRLIERGSQSLLLKEHLNYIHLGCLVVRVKPLHRNNLGTKV 209
           +Y H  EE I C  GD V+  LI+  S   L +  +++IH+G + VR++ LHR + GT  
Sbjct: 101 VYIHKSEEAILCVDGDQVDRLLIQPESAEQLSRSGMSFIHMGIVQVRIQILHRQHEGTTA 160

Query: 210 HFVLMDTNHLD*EQSSLVTLELDMNAGGGIIYFVPDYAKMTRDFYNHIRLGTQTKGY 380
             V  D N    +QS   T+ELD+  G  ++Y +PD     RDF  ++++   TKGY
Sbjct: 161 LVVFRD-NRWQGDQSIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKGY 216


>gb|ACE76864.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1968

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 43/117 (36%), Positives = 65/117 (55%)
 Frame = +3

Query: 30  LYGHYKEEPIKCSSGDSVELRLIERGSQSLLLKEHLNYIHLGCLVVRVKPLHRNNLGTKV 209
           +Y H  EE I C  GD V+  LI+  S   L +  +++IH+G + VR++ LHR + GT  
Sbjct: 101 VYIHRSEEAILCVDGDQVDRLLIQPESAEQLNRSGMSFIHMGIVQVRIQILHRQHEGTTA 160

Query: 210 HFVLMDTNHLD*EQSSLVTLELDMNAGGGIIYFVPDYAKMTRDFYNHIRLGTQTKGY 380
             V  D N    +QS   T+ELD+  G  ++Y +PD     RDF  ++++   TKGY
Sbjct: 161 LVVFRD-NRWQGDQSIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKGY 216


>gb|ACE76858.1| polyprotein [Citrus yellow mosaic virus]
          Length = 1967

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 43/117 (36%), Positives = 65/117 (55%)
 Frame = +3

Query: 30  LYGHYKEEPIKCSSGDSVELRLIERGSQSLLLKEHLNYIHLGCLVVRVKPLHRNNLGTKV 209
           +Y H  EE I C  GD V+  LI+  S   L +  +++IH+G + VR++ LHR + GT  
Sbjct: 101 VYIHRSEEAILCVDGDQVDRLLIQPESAEQLNRSGMSFIHMGIVQVRIQILHRQHEGTTA 160

Query: 210 HFVLMDTNHLD*EQSSLVTLELDMNAGGGIIYFVPDYAKMTRDFYNHIRLGTQTKGY 380
             V  D N    +QS   T+ELD+  G  ++Y +PD     RDF  ++++   TKGY
Sbjct: 161 LVVFRD-NRWQGDQSIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKGY 216


>gb|ACH86210.1| unknown [Citrus yellow mosaic virus]
          Length = 463

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 43/117 (36%), Positives = 65/117 (55%)
 Frame = +3

Query: 30  LYGHYKEEPIKCSSGDSVELRLIERGSQSLLLKEHLNYIHLGCLVVRVKPLHRNNLGTKV 209
           +Y H  EE I C  GD V+  LI+  S   L +  +++IH+G + VR++ LHR + GT  
Sbjct: 101 VYIHRSEEAILCVDGDQVDRLLIQPESAEQLNRSGMSFIHMGIVQVRIQILHRQHEGTTA 160

Query: 210 HFVLMDTNHLD*EQSSLVTLELDMNAGGGIIYFVPDYAKMTRDFYNHIRLGTQTKGY 380
             V  D N    +QS   T+ELD+  G  ++Y +PD     RDF  ++++   TKGY
Sbjct: 161 LVVFRD-NRWQGDQSIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKGY 216


>pir||S11479 circular genome protein 3 - Commelina yellow mottle virus
          Length = 407

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 39/117 (33%), Positives = 65/117 (55%)
 Frame = +3

Query: 30  LYGHYKEEPIKCSSGDSVELRLIERGSQSLLLKEHLNYIHLGCLVVRVKPLHRNNLGTKV 209
           +Y H  EE +   +G  V+   I+  S  +L +  + +IH+G ++VR++ LHR   GT  
Sbjct: 102 VYSHRSEERMMVVNGSQVDRSFIQESSFEVLSRTGIEFIHIGVMLVRIQILHRKFAGTMA 161

Query: 210 HFVLMDTNHLD*EQSSLVTLELDMNAGGGIIYFVPDYAKMTRDFYNHIRLGTQTKGY 380
             V  DT   D +++ L  +E+D++ G  I+Y +PD     + FY HI++   TKGY
Sbjct: 162 LIVFRDTRWSD-DRAVLAAMEIDLSEGNQIVYVLPDIMMTIKSFYRHIQICVMTKGY 217


>ref|NP_039820.1| polyprotein [Commelina yellow mottle virus]
           gi|130594|sp|P19199.2|POL_COYMV RecName:
           Full=Polyprotein P3; Includes: RecName: Full=Putative
           movement protein; Short=MP; Includes: RecName:
           Full=Capsid protein; AltName: Full=Coat protein;
           Short=CP; Includes: RecName: Full=Protease; Short=PR;
           Includes: RecName: Full=Reverse transcriptase; Short=RT;
           Includes: RecName: Full=Ribonuclease H
           gi|59050|emb|CAA37110.1| unnamed protein product
           [Commelina yellow mottle virus]
          Length = 1886

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 39/117 (33%), Positives = 65/117 (55%)
 Frame = +3

Query: 30  LYGHYKEEPIKCSSGDSVELRLIERGSQSLLLKEHLNYIHLGCLVVRVKPLHRNNLGTKV 209
           +Y H  EE +   +G  V+   I+  S  +L +  + +IH+G ++VR++ LHR   GT  
Sbjct: 102 VYSHRSEERMMVVNGSQVDRSFIQESSFEVLSRTGIEFIHIGVMLVRIQILHRKFAGTMA 161

Query: 210 HFVLMDTNHLD*EQSSLVTLELDMNAGGGIIYFVPDYAKMTRDFYNHIRLGTQTKGY 380
             V  DT   D +++ L  +E+D++ G  I+Y +PD     + FY HI++   TKGY
Sbjct: 162 LIVFRDTRWSD-DRAVLAAMEIDLSEGNQIVYVLPDIMMTIKSFYRHIQICVMTKGY 217


>ref|XP_006858540.1| hypothetical protein AMTR_s00071p00160380 [Amborella trichopoda]
           gi|548862649|gb|ERN20007.1| hypothetical protein
           AMTR_s00071p00160380 [Amborella trichopoda]
          Length = 899

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 36/118 (30%), Positives = 68/118 (57%)
 Frame = +3

Query: 30  LYGHYKEEPIKCSSGDSVELRLIERGSQSLLLKEHLNYIHLGCLVVRVKPLHRNNLGTKV 209
           +Y HY E  I C+    V+++ I   S   L +  + ++H+G +++R++ LHR++ GT  
Sbjct: 266 VYQHYSESRILCTGEQQVDMQFINSQSYEKLRRAGMQHVHIGLIMIRIQALHRSDAGTNA 325

Query: 210 HFVLMDTNHLD*EQSSLVTLELDMNAGGGIIYFVPDYAKMTRDFYNHIRLGTQTKGYK 383
             V+ DT   D +++ + T+E D+     ++Y  P+      DF+NHI++  QT+GY+
Sbjct: 326 LIVIRDTRWPD-DRAVIGTMEADLTTRTQLVYIAPNMMLSLVDFHNHIQISIQTQGYE 382


>ref|YP_002117531.1| ORF3 [Cycad leaf necrosis virus] gi|194399161|gb|ACF60613.1| ORF3
           [Cycad leaf necrosis virus]
          Length = 1916

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
 Frame = +3

Query: 30  LYGHYKEEPIKCSSGDSVELRLIERGSQSLLLKEHLNYIHLGCLVVRVKPLHRNNLGTKV 209
           +Y H  EE +       V+   I + S   L KEH+ YIHLG + VR++ LHR   GT  
Sbjct: 99  VYYHRSEERLLIIGNTQVDRTFIPQQSYEALSKEHMEYIHLGVIQVRLQILHRKFAGTLA 158

Query: 210 HFVLMDTNHLD*EQSSLVT-LELDMNAGGGIIYFVPDYAKMTRDFYNHIRLGTQTKGY 380
                DT     +   L++ +E+D++ G  +IY +PD     +DFY HI++  QTKGY
Sbjct: 159 LISFRDTRWAGDDDRQLISVMEVDLSEGCQLIYVIPDMMLTLKDFYRHIQVSIQTKGY 216


>ref|YP_009002585.1| polyprotein [Hibiscus bacilliform virus GD1]
           gi|584388573|gb|AHI90954.1| polyprotein [Hibiscus
           bacilliform virus GD1]
          Length = 1892

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 43/117 (36%), Positives = 65/117 (55%)
 Frame = +3

Query: 30  LYGHYKEEPIKCSSGDSVELRLIERGSQSLLLKEHLNYIHLGCLVVRVKPLHRNNLGTKV 209
           +Y H  EE I C+ G+ V+   I+  S   L +  +++IH+G + VR++ LHR N GT  
Sbjct: 105 VYSHRSEEAILCTDGNQVDRTFIQPESMEALQRTGISFIHIGIMQVRLQILHRQNEGTMA 164

Query: 210 HFVLMDTNHLD*EQSSLVTLELDMNAGGGIIYFVPDYAKMTRDFYNHIRLGTQTKGY 380
             V  DT   + +QS   T+E+D+  G  IIY VPD      DF  +I++   T+GY
Sbjct: 165 LVVFRDT-RWNGDQSIFATMEVDLTEGRQIIYVVPDTMMTIGDFARNIQISILTRGY 220


>gb|AER00538.1| ORF III [Citrus yellow mosaic virus]
          Length = 1982

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 43/117 (36%), Positives = 64/117 (54%)
 Frame = +3

Query: 30  LYGHYKEEPIKCSSGDSVELRLIERGSQSLLLKEHLNYIHLGCLVVRVKPLHRNNLGTKV 209
           +Y H  EE I C  GD V+  LI+  S   L +  + +IH+G + VR++ LHR + GT  
Sbjct: 101 VYIHRSEEAILCVDGDQVDRLLIQPESAEQLNRSGMPFIHMGIVQVRIQILHRQHEGTTA 160

Query: 210 HFVLMDTNHLD*EQSSLVTLELDMNAGGGIIYFVPDYAKMTRDFYNHIRLGTQTKGY 380
             V  D N    +QS   T+ELD+  G  ++Y +PD     RDF  ++++   TKGY
Sbjct: 161 LVVFRD-NRWQGDQSIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKGY 216


>gb|AER00544.1| ORF III [Citrus yellow mosaic virus]
          Length = 1976

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 43/117 (36%), Positives = 63/117 (53%)
 Frame = +3

Query: 30  LYGHYKEEPIKCSSGDSVELRLIERGSQSLLLKEHLNYIHLGCLVVRVKPLHRNNLGTKV 209
           +Y H  EE I C  GD V+  LI+  S   L +  + +IH+G + VR+  LHR + GT  
Sbjct: 101 VYIHRSEEAILCVDGDQVDRLLIQPESAEQLNRSGMPFIHMGIVQVRIPILHRQHEGTTA 160

Query: 210 HFVLMDTNHLD*EQSSLVTLELDMNAGGGIIYFVPDYAKMTRDFYNHIRLGTQTKGY 380
             V  D N    +QS   T+ELD+  G  ++Y +PD     RDF  ++++   TKGY
Sbjct: 161 LVVFRD-NRWQGDQSIFATMELDLTKGMQMVYIIPDTMMTVRDFCRNVQISILTKGY 216


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