BLASTX nr result
ID: Cocculus22_contig00024656
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00024656
(1116 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006479054.1| PREDICTED: RNA-binding protein 40-like isofo... 346 1e-92
ref|XP_006443354.1| hypothetical protein CICLE_v10020067mg [Citr... 346 1e-92
ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Viti... 341 3e-91
ref|XP_007207453.1| hypothetical protein PRUPE_ppa005530mg [Prun... 340 5e-91
ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ... 332 2e-88
ref|XP_007030222.1| RNA-binding family protein isoform 5 [Theobr... 329 1e-87
ref|XP_007030218.1| RNA-binding family protein isoform 1 [Theobr... 329 1e-87
ref|XP_002525464.1| RNA binding protein, putative [Ricinus commu... 328 3e-87
gb|EXB36255.1| RNA-binding protein 40 [Morus notabilis] 320 7e-85
ref|XP_004493139.1| PREDICTED: RNA-binding protein 40-like isofo... 320 7e-85
ref|XP_004139973.1| PREDICTED: RNA-binding protein 40-like [Cucu... 320 9e-85
ref|XP_004493140.1| PREDICTED: RNA-binding protein 40-like isofo... 318 2e-84
ref|XP_002319145.2| hypothetical protein POPTR_0013s05120g [Popu... 314 4e-83
ref|XP_003548764.1| PREDICTED: RNA-binding protein 40-like [Glyc... 314 4e-83
ref|XP_006853102.1| hypothetical protein AMTR_s00038p00125360 [A... 312 1e-82
ref|XP_004984515.1| PREDICTED: RNA-binding protein 40-like [Seta... 306 1e-80
ref|XP_003624600.1| RNA-binding protein [Medicago truncatula] gi... 306 1e-80
gb|EEE58983.1| hypothetical protein OsJ_10687 [Oryza sativa Japo... 304 5e-80
ref|NP_001049993.1| Os03g0326600 [Oryza sativa Japonica Group] g... 304 5e-80
ref|XP_004230890.1| PREDICTED: RNA-binding protein 40-like isofo... 303 1e-79
>ref|XP_006479054.1| PREDICTED: RNA-binding protein 40-like isoform X2 [Citrus sinensis]
Length = 389
Score = 346 bits (887), Expect = 1e-92
Identities = 192/309 (62%), Positives = 207/309 (66%)
Frame = +2
Query: 2 PPPDGNILTNIVNTLIAVPRFYTQVLHLMNKMNIPAPFRMXXXXXXXXXXXXXXXXXXXX 181
PP DGNILTNIVN LIAVPRFYTQVLHLMNKMNIPAPFRM
Sbjct: 83 PPVDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPPVPTASAPQPP 142
Query: 182 XXXXXXXXXNXXXXXXXXXXXXXXXXNDHNVDKRSFSGGAPSISKHNRKRARREAIVGPA 361
+D + DK + S G ++K RKRARRE+IVGPA
Sbjct: 143 PLPPSVPVQPTPPPTADLSSSESEMDSDEDNDKGN-SFGNSEVAKPGRKRARRESIVGPA 201
Query: 362 IDKDVAHEAVGLKPATLVPKEIPMIKKKNPVLQIKITPKTTQNXXXXXXXXXXXXXXXXX 541
I+KDVAHEAVG+KPATL KEIP+IKKKNPVLQIKITPK +Q
Sbjct: 202 INKDVAHEAVGVKPATLTRKEIPVIKKKNPVLQIKITPKASQTEDKDDSVAKELEEPNKE 261
Query: 542 XXXXVKPFATPEEIERGKLPPEEILSLPMFKNYAAGNPATVLYIKNLSKDVVADDXXXXX 721
VKPFATPEE+E GKLPPEEILSLPMFKNYAAGNPA+VLYIKNL+KDV+ DD
Sbjct: 262 DSD-VKPFATPEELEMGKLPPEEILSLPMFKNYAAGNPASVLYIKNLAKDVIPDDFFFIF 320
Query: 722 XXXXASTDAAKSCLNVKLMQEGRMRGQAFVTFPSIELAHRALNLVNGYVFKGKPMIIQFG 901
S DAAK L VKLMQEGRMRGQAFVTFPS+ELAHRALNLVNGYVFKGKPMIIQFG
Sbjct: 321 GSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQFG 380
Query: 902 RNPVAGKAN 928
RNP A K N
Sbjct: 381 RNPAAAKPN 389
>ref|XP_006443354.1| hypothetical protein CICLE_v10020067mg [Citrus clementina]
gi|567901734|ref|XP_006443355.1| hypothetical protein
CICLE_v10020067mg [Citrus clementina]
gi|568850729|ref|XP_006479053.1| PREDICTED: RNA-binding
protein 40-like isoform X1 [Citrus sinensis]
gi|557545616|gb|ESR56594.1| hypothetical protein
CICLE_v10020067mg [Citrus clementina]
gi|557545617|gb|ESR56595.1| hypothetical protein
CICLE_v10020067mg [Citrus clementina]
Length = 461
Score = 346 bits (887), Expect = 1e-92
Identities = 192/309 (62%), Positives = 207/309 (66%)
Frame = +2
Query: 2 PPPDGNILTNIVNTLIAVPRFYTQVLHLMNKMNIPAPFRMXXXXXXXXXXXXXXXXXXXX 181
PP DGNILTNIVN LIAVPRFYTQVLHLMNKMNIPAPFRM
Sbjct: 155 PPVDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPPVPTASAPQPP 214
Query: 182 XXXXXXXXXNXXXXXXXXXXXXXXXXNDHNVDKRSFSGGAPSISKHNRKRARREAIVGPA 361
+D + DK + S G ++K RKRARRE+IVGPA
Sbjct: 215 PLPPSVPVQPTPPPTADLSSSESEMDSDEDNDKGN-SFGNSEVAKPGRKRARRESIVGPA 273
Query: 362 IDKDVAHEAVGLKPATLVPKEIPMIKKKNPVLQIKITPKTTQNXXXXXXXXXXXXXXXXX 541
I+KDVAHEAVG+KPATL KEIP+IKKKNPVLQIKITPK +Q
Sbjct: 274 INKDVAHEAVGVKPATLTRKEIPVIKKKNPVLQIKITPKASQTEDKDDSVAKELEEPNKE 333
Query: 542 XXXXVKPFATPEEIERGKLPPEEILSLPMFKNYAAGNPATVLYIKNLSKDVVADDXXXXX 721
VKPFATPEE+E GKLPPEEILSLPMFKNYAAGNPA+VLYIKNL+KDV+ DD
Sbjct: 334 DSD-VKPFATPEELEMGKLPPEEILSLPMFKNYAAGNPASVLYIKNLAKDVIPDDFFFIF 392
Query: 722 XXXXASTDAAKSCLNVKLMQEGRMRGQAFVTFPSIELAHRALNLVNGYVFKGKPMIIQFG 901
S DAAK L VKLMQEGRMRGQAFVTFPS+ELAHRALNLVNGYVFKGKPMIIQFG
Sbjct: 393 GSLFGSIDAAKCGLTVKLMQEGRMRGQAFVTFPSVELAHRALNLVNGYVFKGKPMIIQFG 452
Query: 902 RNPVAGKAN 928
RNP A K N
Sbjct: 453 RNPAAAKPN 461
>ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Vitis vinifera]
gi|298205172|emb|CBI17231.3| unnamed protein product
[Vitis vinifera]
Length = 463
Score = 341 bits (875), Expect = 3e-91
Identities = 187/307 (60%), Positives = 202/307 (65%)
Frame = +2
Query: 2 PPPDGNILTNIVNTLIAVPRFYTQVLHLMNKMNIPAPFRMXXXXXXXXXXXXXXXXXXXX 181
PPPDGNILTNIVN LIAVPRFY QVLHLMNKMNIPAPFRM
Sbjct: 162 PPPDGNILTNIVNALIAVPRFYVQVLHLMNKMNIPAPFRMALPTPPLPPPVPAPPPPPPP 221
Query: 182 XXXXXXXXXNXXXXXXXXXXXXXXXXNDHNVDKRSFSGGAPSISKHNRKRARREAIVGPA 361
+ +D VD ++S G P +K RKR +REAIVGP
Sbjct: 222 PEAARPNLEDLSSGESEMES------SDEEVDGNAYSTGPPRETKPGRKRVKREAIVGPG 275
Query: 362 IDKDVAHEAVGLKPATLVPKEIPMIKKKNPVLQIKITPKTTQNXXXXXXXXXXXXXXXXX 541
+DKDVAHEAVG+KPATLVPKEIPMIKKKNPVLQIKI PK
Sbjct: 276 VDKDVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIVPKVITEHKDECSIMKESEDSEKE 335
Query: 542 XXXXVKPFATPEEIERGKLPPEEILSLPMFKNYAAGNPATVLYIKNLSKDVVADDXXXXX 721
+KP+AT EE++ GKLPPEEILSLPMFKNY AGNPA VLYIKNL+KDVV DD
Sbjct: 336 DFD-LKPYATLEELKSGKLPPEEILSLPMFKNYTAGNPAPVLYIKNLAKDVVVDDFYFIF 394
Query: 722 XXXXASTDAAKSCLNVKLMQEGRMRGQAFVTFPSIELAHRALNLVNGYVFKGKPMIIQFG 901
S DAAKS L+VKLMQEGRMRGQAFVTFPS+ELAH ALNLVNGYVFKGKPMIIQFG
Sbjct: 395 GSLFGSVDAAKSGLSVKLMQEGRMRGQAFVTFPSVELAHHALNLVNGYVFKGKPMIIQFG 454
Query: 902 RNPVAGK 922
RNP A K
Sbjct: 455 RNPAAAK 461
>ref|XP_007207453.1| hypothetical protein PRUPE_ppa005530mg [Prunus persica]
gi|462403095|gb|EMJ08652.1| hypothetical protein
PRUPE_ppa005530mg [Prunus persica]
Length = 456
Score = 340 bits (873), Expect = 5e-91
Identities = 187/309 (60%), Positives = 204/309 (66%)
Frame = +2
Query: 2 PPPDGNILTNIVNTLIAVPRFYTQVLHLMNKMNIPAPFRMXXXXXXXXXXXXXXXXXXXX 181
PPPDGNILTNIVN LIAVPRFYTQVLHLMNKMNIPAPFRM
Sbjct: 161 PPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRMALPSPPLPPSVPVPPPPPPP 220
Query: 182 XXXXXXXXXNXXXXXXXXXXXXXXXXNDHNVDKRSFSGGAPSISKHNRKRARREAIVGPA 361
+D +D + SG + +KR +REAIVGPA
Sbjct: 221 LAAKPPSAD-------LSSEESEMESSDEEIDGKPSSG-----TSRGQKRVKREAIVGPA 268
Query: 362 IDKDVAHEAVGLKPATLVPKEIPMIKKKNPVLQIKITPKTTQNXXXXXXXXXXXXXXXXX 541
+DKDVAHE VGLKPA LVPKE PMIKKKNP++QIKI PK N
Sbjct: 269 VDKDVAHEDVGLKPAILVPKERPMIKKKNPIVQIKIAPKVVNNEHKDDSITKDSEHPKNE 328
Query: 542 XXXXVKPFATPEEIERGKLPPEEILSLPMFKNYAAGNPATVLYIKNLSKDVVADDXXXXX 721
+ FATPEE+ERGKLPPEEILSLPMFKNYAAGNPA+VLYIKNL+KD+VADD
Sbjct: 329 SSD-INSFATPEELERGKLPPEEILSLPMFKNYAAGNPASVLYIKNLAKDIVADDFYYIF 387
Query: 722 XXXXASTDAAKSCLNVKLMQEGRMRGQAFVTFPSIELAHRALNLVNGYVFKGKPMIIQFG 901
S DAAKS L++KLMQEGRMRGQAFVTFPS+ELAH ALNLVNGYVFKGKPMIIQFG
Sbjct: 388 GSLFGSVDAAKSGLSLKLMQEGRMRGQAFVTFPSVELAHYALNLVNGYVFKGKPMIIQFG 447
Query: 902 RNPVAGKAN 928
RNP AGKAN
Sbjct: 448 RNPAAGKAN 456
>ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 40-like [Vitis
vinifera]
Length = 463
Score = 332 bits (851), Expect = 2e-88
Identities = 183/305 (60%), Positives = 200/305 (65%)
Frame = +2
Query: 8 PDGNILTNIVNTLIAVPRFYTQVLHLMNKMNIPAPFRMXXXXXXXXXXXXXXXXXXXXXX 187
PDGNILTNIVN LIAVPRFY QVLHLMNKMNIPAPFRM
Sbjct: 164 PDGNILTNIVNALIAVPRFYVQVLHLMNKMNIPAPFRMALPTPPIPPPVPAPPTPPPPPE 223
Query: 188 XXXXXXXNXXXXXXXXXXXXXXXXNDHNVDKRSFSGGAPSISKHNRKRARREAIVGPAID 367
+ +D VD +++S G P +K RKR +REAI GP +D
Sbjct: 224 AARPNLEDLSSGESEMES------SDEEVDGKAYSPGPPRETKPGRKRVKREAIAGPGVD 277
Query: 368 KDVAHEAVGLKPATLVPKEIPMIKKKNPVLQIKITPKTTQNXXXXXXXXXXXXXXXXXXX 547
KDVAHEAVG+KPATLVPKEIPMIKKKNPVLQIKI PK
Sbjct: 278 KDVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIAPKVITEHKDECSIMKESEDSEKEDF 337
Query: 548 XXVKPFATPEEIERGKLPPEEILSLPMFKNYAAGNPATVLYIKNLSKDVVADDXXXXXXX 727
+K +AT EE++ GKLPPEEILSLPMFKNYAAGNPA VLYIKNL+KDVV DD
Sbjct: 338 D-LKHYATLEELKSGKLPPEEILSLPMFKNYAAGNPAPVLYIKNLAKDVVVDDFYFIFGS 396
Query: 728 XXASTDAAKSCLNVKLMQEGRMRGQAFVTFPSIELAHRALNLVNGYVFKGKPMIIQFGRN 907
S DAAKS L+VKLMQEGRMRGQAFVTFPS+ELAH ALN+VNGYVFKGKPMIIQFGRN
Sbjct: 397 LFGSVDAAKSGLSVKLMQEGRMRGQAFVTFPSVELAHHALNVVNGYVFKGKPMIIQFGRN 456
Query: 908 PVAGK 922
P A K
Sbjct: 457 PAAAK 461
>ref|XP_007030222.1| RNA-binding family protein isoform 5 [Theobroma cacao]
gi|508718827|gb|EOY10724.1| RNA-binding family protein
isoform 5 [Theobroma cacao]
Length = 345
Score = 329 bits (843), Expect = 1e-87
Identities = 184/310 (59%), Positives = 200/310 (64%), Gaps = 1/310 (0%)
Frame = +2
Query: 2 PPPDGNILTNIVNTLIAVPRFYTQVLHLMNKMNIPAPFRMXXXXXXXXXXXXXXXXXXXX 181
PPPDGNILTNIVN LIAVPRFYTQVLHLMNKMNIPAPFRM
Sbjct: 45 PPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPSVPAPQPPPPP 104
Query: 182 XXXXXXXXXNXXXXXXXXXXXXXXXXNDHNVDKRSFSGGAPSISKHNRKRARREAIVGPA 361
+D V+ + +K RKRARREAIVGPA
Sbjct: 105 PLPASTP--TEPHFADASSSESEMESSDEEVNDKG-------TAKSARKRARREAIVGPA 155
Query: 362 IDKDVAHEAVGLKPATLVPKEIPMIKKKNPVLQIKITPKTTQNXXXXXXXXXXXXXXXXX 541
IDK VAHEAVG+KPATL+PKEIP IKKKNP+LQIKI PK N
Sbjct: 156 IDKSVAHEAVGVKPATLIPKEIPFIKKKNPILQIKIAPKHIPNEQKDDDDDYKRISEEPN 215
Query: 542 XXXX-VKPFATPEEIERGKLPPEEILSLPMFKNYAAGNPATVLYIKNLSKDVVADDXXXX 718
K FAT +E+E+GKLPPEEILSLPMFKNYAAGNPA+VLYIKNL+KDVV +D
Sbjct: 216 EEDSDAKCFATADELEKGKLPPEEILSLPMFKNYAAGNPASVLYIKNLAKDVVPEDFYFI 275
Query: 719 XXXXXASTDAAKSCLNVKLMQEGRMRGQAFVTFPSIELAHRALNLVNGYVFKGKPMIIQF 898
S DAAKS LNVKLMQEGRMRGQAFVTFP++ELAH ALNLVNGYVFKGKP+IIQF
Sbjct: 276 FGSLFGSIDAAKSGLNVKLMQEGRMRGQAFVTFPAVELAHHALNLVNGYVFKGKPIIIQF 335
Query: 899 GRNPVAGKAN 928
GRNP K N
Sbjct: 336 GRNPATAKTN 345
>ref|XP_007030218.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|590641397|ref|XP_007030219.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|590641400|ref|XP_007030220.1| RNA-binding family
protein isoform 1 [Theobroma cacao]
gi|508718823|gb|EOY10720.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508718824|gb|EOY10721.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508718825|gb|EOY10722.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 479
Score = 329 bits (843), Expect = 1e-87
Identities = 184/310 (59%), Positives = 200/310 (64%), Gaps = 1/310 (0%)
Frame = +2
Query: 2 PPPDGNILTNIVNTLIAVPRFYTQVLHLMNKMNIPAPFRMXXXXXXXXXXXXXXXXXXXX 181
PPPDGNILTNIVN LIAVPRFYTQVLHLMNKMNIPAPFRM
Sbjct: 179 PPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPSVPAPQPPPPP 238
Query: 182 XXXXXXXXXNXXXXXXXXXXXXXXXXNDHNVDKRSFSGGAPSISKHNRKRARREAIVGPA 361
+D V+ + +K RKRARREAIVGPA
Sbjct: 239 PLPASTP--TEPHFADASSSESEMESSDEEVNDKG-------TAKSARKRARREAIVGPA 289
Query: 362 IDKDVAHEAVGLKPATLVPKEIPMIKKKNPVLQIKITPKTTQNXXXXXXXXXXXXXXXXX 541
IDK VAHEAVG+KPATL+PKEIP IKKKNP+LQIKI PK N
Sbjct: 290 IDKSVAHEAVGVKPATLIPKEIPFIKKKNPILQIKIAPKHIPNEQKDDDDDYKRISEEPN 349
Query: 542 XXXX-VKPFATPEEIERGKLPPEEILSLPMFKNYAAGNPATVLYIKNLSKDVVADDXXXX 718
K FAT +E+E+GKLPPEEILSLPMFKNYAAGNPA+VLYIKNL+KDVV +D
Sbjct: 350 EEDSDAKCFATADELEKGKLPPEEILSLPMFKNYAAGNPASVLYIKNLAKDVVPEDFYFI 409
Query: 719 XXXXXASTDAAKSCLNVKLMQEGRMRGQAFVTFPSIELAHRALNLVNGYVFKGKPMIIQF 898
S DAAKS LNVKLMQEGRMRGQAFVTFP++ELAH ALNLVNGYVFKGKP+IIQF
Sbjct: 410 FGSLFGSIDAAKSGLNVKLMQEGRMRGQAFVTFPAVELAHHALNLVNGYVFKGKPIIIQF 469
Query: 899 GRNPVAGKAN 928
GRNP K N
Sbjct: 470 GRNPATAKTN 479
>ref|XP_002525464.1| RNA binding protein, putative [Ricinus communis]
gi|223535277|gb|EEF36954.1| RNA binding protein, putative
[Ricinus communis]
Length = 450
Score = 328 bits (840), Expect = 3e-87
Identities = 182/309 (58%), Positives = 200/309 (64%)
Frame = +2
Query: 2 PPPDGNILTNIVNTLIAVPRFYTQVLHLMNKMNIPAPFRMXXXXXXXXXXXXXXXXXXXX 181
PPPDGNILTNIVN LIAVPRFYTQVLHLMNKMNIPAPFRM
Sbjct: 151 PPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPSAPPPPPPPPP 210
Query: 182 XXXXXXXXXNXXXXXXXXXXXXXXXXNDHNVDKRSFSGGAPSISKHNRKRARREAIVGPA 361
+ +D ++D ++ K RKR R+EAIVGP
Sbjct: 211 TVAGKPHLADLSSSEAEMES------SDEDIDNKTHPVSREI--KSRRKRVRQEAIVGPG 262
Query: 362 IDKDVAHEAVGLKPATLVPKEIPMIKKKNPVLQIKITPKTTQNXXXXXXXXXXXXXXXXX 541
+DKDV HEAVGLKP++LVPKEIP+IKKKNPVLQIKI PK +Q
Sbjct: 263 VDKDVVHEAVGLKPSSLVPKEIPVIKKKNPVLQIKIAPKVSQTEQTDDISMKESDEQDEE 322
Query: 542 XXXXVKPFATPEEIERGKLPPEEILSLPMFKNYAAGNPATVLYIKNLSKDVVADDXXXXX 721
KPFATPEE+E KL PEEILSLP FKNY GNPA+VLYIKNLSKD+VADD
Sbjct: 323 GLDH-KPFATPEELESNKLAPEEILSLPQFKNYTVGNPASVLYIKNLSKDMVADDFFYIF 381
Query: 722 XXXXASTDAAKSCLNVKLMQEGRMRGQAFVTFPSIELAHRALNLVNGYVFKGKPMIIQFG 901
S DAAK L+VKLMQEGRMRGQAFVTFPS+ELAH+ALNLVNGYVFKGKPMIIQFG
Sbjct: 382 GSLFGSLDAAKVGLSVKLMQEGRMRGQAFVTFPSVELAHQALNLVNGYVFKGKPMIIQFG 441
Query: 902 RNPVAGKAN 928
RNP A K N
Sbjct: 442 RNPSASKTN 450
>gb|EXB36255.1| RNA-binding protein 40 [Morus notabilis]
Length = 486
Score = 320 bits (820), Expect = 7e-85
Identities = 179/309 (57%), Positives = 197/309 (63%)
Frame = +2
Query: 2 PPPDGNILTNIVNTLIAVPRFYTQVLHLMNKMNIPAPFRMXXXXXXXXXXXXXXXXXXXX 181
PPPDGNILTNIVN LIAVPRFYTQVLHLMNKMNIPAPFRM
Sbjct: 187 PPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRMAMPTPPLPPLAPAPPPPPPP 246
Query: 182 XXXXXXXXXNXXXXXXXXXXXXXXXXNDHNVDKRSFSGGAPSISKHNRKRARREAIVGPA 361
+D VD+ + G PS KR +R AIVGPA
Sbjct: 247 LESAKQPLA------VSSSEESEMESSDEEVDENINTSG-PS---RGSKRIKRAAIVGPA 296
Query: 362 IDKDVAHEAVGLKPATLVPKEIPMIKKKNPVLQIKITPKTTQNXXXXXXXXXXXXXXXXX 541
+ KDVAHEAVG+KPATL+PKEIP+IKK+N VLQIK K Q
Sbjct: 297 VHKDVAHEAVGVKPATLIPKEIPVIKKRNSVLQIKFANKAAQKEHNDVGVSGETEDPNTE 356
Query: 542 XXXXVKPFATPEEIERGKLPPEEILSLPMFKNYAAGNPATVLYIKNLSKDVVADDXXXXX 721
+KP+ATPEEI+ GKL PEE+LSLP+FKNY AGNPA+VLYIKNL+KDVV DD
Sbjct: 357 SLD-IKPYATPEEIQNGKLGPEELLSLPVFKNYKAGNPASVLYIKNLAKDVVVDDFYYIF 415
Query: 722 XXXXASTDAAKSCLNVKLMQEGRMRGQAFVTFPSIELAHRALNLVNGYVFKGKPMIIQFG 901
STD AKS LNVKLMQEGRMRGQAFVTFPS+ELAH ALNLVNGY FKGKPM+IQFG
Sbjct: 416 GSLFGSTDVAKSSLNVKLMQEGRMRGQAFVTFPSVELAHHALNLVNGYQFKGKPMVIQFG 475
Query: 902 RNPVAGKAN 928
RNP A K N
Sbjct: 476 RNPAAAKEN 484
>ref|XP_004493139.1| PREDICTED: RNA-binding protein 40-like isoform X1 [Cicer arietinum]
Length = 459
Score = 320 bits (820), Expect = 7e-85
Identities = 183/307 (59%), Positives = 200/307 (65%)
Frame = +2
Query: 2 PPPDGNILTNIVNTLIAVPRFYTQVLHLMNKMNIPAPFRMXXXXXXXXXXXXXXXXXXXX 181
PPPDGNILTNIVN LIAVPRFYTQVLHLMNKMNIPAPFRM
Sbjct: 165 PPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPEVPAPPPPVPP 224
Query: 182 XXXXXXXXXNXXXXXXXXXXXXXXXXNDHNVDKRSFSGGAPSISKHNRKRARREAIVGPA 361
+ ++ ++ GA + S RKRARREAIVGPA
Sbjct: 225 PHSVTVKPQSADMSS-----------DESEMESSDEEDGARTESS-GRKRARREAIVGPA 272
Query: 362 IDKDVAHEAVGLKPATLVPKEIPMIKKKNPVLQIKITPKTTQNXXXXXXXXXXXXXXXXX 541
IDKDVAHE+VG+KPATL+PKEIPMIKK N VL+I I PK +
Sbjct: 273 IDKDVAHESVGVKPATLIPKEIPMIKK-NHVLKINIAPKASLKEHKDNDTKQELQEPDKE 331
Query: 542 XXXXVKPFATPEEIERGKLPPEEILSLPMFKNYAAGNPATVLYIKNLSKDVVADDXXXXX 721
K F T +E+ERGKLPPEEILSLPMFKNY AGNPA+VLYIKNL+KDV+ADD
Sbjct: 332 ALDPNK-FLTTDELERGKLPPEEILSLPMFKNYTAGNPASVLYIKNLAKDVIADDFYFLF 390
Query: 722 XXXXASTDAAKSCLNVKLMQEGRMRGQAFVTFPSIELAHRALNLVNGYVFKGKPMIIQFG 901
ST+AAKS L VKLMQEGRMRGQAFVTFPS ELAHRALNLVNGYVFKGKPMIIQFG
Sbjct: 391 GSFFGSTEAAKSGLQVKLMQEGRMRGQAFVTFPSTELAHRALNLVNGYVFKGKPMIIQFG 450
Query: 902 RNPVAGK 922
RNP A K
Sbjct: 451 RNPAAAK 457
>ref|XP_004139973.1| PREDICTED: RNA-binding protein 40-like [Cucumis sativus]
Length = 359
Score = 320 bits (819), Expect = 9e-85
Identities = 174/303 (57%), Positives = 193/303 (63%)
Frame = +2
Query: 2 PPPDGNILTNIVNTLIAVPRFYTQVLHLMNKMNIPAPFRMXXXXXXXXXXXXXXXXXXXX 181
PPPDGNILTNIVN LIAVPRFYTQVLHLMNKMNIPAPFR+
Sbjct: 53 PPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRLPLPTPPLPPSIPAPPSPSLT 112
Query: 182 XXXXXXXXXNXXXXXXXXXXXXXXXXNDHNVDKRSFSGGAPSISKHNRKRARREAIVGPA 361
++ +V+ + G +K KR R E IVGP
Sbjct: 113 LPPLPPPVTTRSQVTNMPSDESEMESSEEDVEGKYNPSGVSKTAKSGYKRPRCETIVGPG 172
Query: 362 IDKDVAHEAVGLKPATLVPKEIPMIKKKNPVLQIKITPKTTQNXXXXXXXXXXXXXXXXX 541
IDKDVAHEAVG+KP+TLVPKEIPMIKKKNPV+QI+I PK +
Sbjct: 173 IDKDVAHEAVGVKPSTLVPKEIPMIKKKNPVIQIRIAPKVIHDGKVGNINNDGEEAEKEA 232
Query: 542 XXXXVKPFATPEEIERGKLPPEEILSLPMFKNYAAGNPATVLYIKNLSKDVVADDXXXXX 721
+KP+AT E++ERGKLPPEEILSLPMFKNY AG P +VLYIKNL+KDV+ DD
Sbjct: 233 DD--LKPYATLEDLERGKLPPEEILSLPMFKNYTAGTPTSVLYIKNLAKDVLNDDLYYIF 290
Query: 722 XXXXASTDAAKSCLNVKLMQEGRMRGQAFVTFPSIELAHRALNLVNGYVFKGKPMIIQFG 901
D AKS L VKLMQEGRMRGQAFVTFPSIELA RALNLVNGYVFKGKPMIIQFG
Sbjct: 291 GSLFEGIDEAKSALTVKLMQEGRMRGQAFVTFPSIELAQRALNLVNGYVFKGKPMIIQFG 350
Query: 902 RNP 910
RNP
Sbjct: 351 RNP 353
>ref|XP_004493140.1| PREDICTED: RNA-binding protein 40-like isoform X2 [Cicer arietinum]
Length = 439
Score = 318 bits (816), Expect = 2e-84
Identities = 184/308 (59%), Positives = 198/308 (64%), Gaps = 1/308 (0%)
Frame = +2
Query: 2 PPPDGNILTNIVNTLIAVPRFYTQVLHLMNKMNIPAPFRMXXXXXXXXXXXXXXXXXXXX 181
PPPDGNILTNIVN LIAVPRFYTQVLHLMNKMNIPAPFRM
Sbjct: 165 PPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPEPQSA------ 218
Query: 182 XXXXXXXXXNXXXXXXXXXXXXXXXXNDHNVDKRSF-SGGAPSISKHNRKRARREAIVGP 358
D + D+ S + S RKRARREAIVGP
Sbjct: 219 ---------------------------DMSSDESEMESSDEVTSSVSGRKRARREAIVGP 251
Query: 359 AIDKDVAHEAVGLKPATLVPKEIPMIKKKNPVLQIKITPKTTQNXXXXXXXXXXXXXXXX 538
AIDKDVAHE+VG+KPATL+PKEIPMIKK N VL+I I PK +
Sbjct: 252 AIDKDVAHESVGVKPATLIPKEIPMIKK-NHVLKINIAPKASLKEHKDNDTKQELQEPDK 310
Query: 539 XXXXXVKPFATPEEIERGKLPPEEILSLPMFKNYAAGNPATVLYIKNLSKDVVADDXXXX 718
K F T +E+ERGKLPPEEILSLPMFKNY AGNPA+VLYIKNL+KDV+ADD
Sbjct: 311 EALDPNK-FLTTDELERGKLPPEEILSLPMFKNYTAGNPASVLYIKNLAKDVIADDFYFL 369
Query: 719 XXXXXASTDAAKSCLNVKLMQEGRMRGQAFVTFPSIELAHRALNLVNGYVFKGKPMIIQF 898
ST+AAKS L VKLMQEGRMRGQAFVTFPS ELAHRALNLVNGYVFKGKPMIIQF
Sbjct: 370 FGSFFGSTEAAKSGLQVKLMQEGRMRGQAFVTFPSTELAHRALNLVNGYVFKGKPMIIQF 429
Query: 899 GRNPVAGK 922
GRNP A K
Sbjct: 430 GRNPAAAK 437
>ref|XP_002319145.2| hypothetical protein POPTR_0013s05120g [Populus trichocarpa]
gi|550325000|gb|EEE95068.2| hypothetical protein
POPTR_0013s05120g [Populus trichocarpa]
Length = 479
Score = 314 bits (805), Expect = 4e-83
Identities = 179/309 (57%), Positives = 197/309 (63%)
Frame = +2
Query: 2 PPPDGNILTNIVNTLIAVPRFYTQVLHLMNKMNIPAPFRMXXXXXXXXXXXXXXXXXXXX 181
PPPDGNILTNIVN LIAVPRFYTQVLHLMNKMNIPAPFRM
Sbjct: 178 PPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPLPPPSPPPPPPP 237
Query: 182 XXXXXXXXXNXXXXXXXXXXXXXXXXNDHNVDKRSFSGGAPSISKHNRKRARREAIVGPA 361
+D VD ++ G + ++ K RKR +R+AIVGPA
Sbjct: 238 PCLT-----ENSSLAEQSSSESEMESSDEEVDDKAPYGASGAV-KQRRKRIKRKAIVGPA 291
Query: 362 IDKDVAHEAVGLKPATLVPKEIPMIKKKNPVLQIKITPKTTQNXXXXXXXXXXXXXXXXX 541
DKDV HE+VGLKPA+LVPKEIP+IKKKN VLQIKI PK T N
Sbjct: 292 ADKDVVHESVGLKPASLVPKEIPIIKKKNTVLQIKIAPKVTHNEYKDDSIMTESEDPGTE 351
Query: 542 XXXXVKPFATPEEIERGKLPPEEILSLPMFKNYAAGNPATVLYIKNLSKDVVADDXXXXX 721
K +AT EEIE +L PEEILSLP FKNY GNPA+VLYIKNL K+VVADD
Sbjct: 352 GSDQ-KHYATAEEIESKRLVPEEILSLPKFKNYTVGNPASVLYIKNLDKEVVADDFFYIF 410
Query: 722 XXXXASTDAAKSCLNVKLMQEGRMRGQAFVTFPSIELAHRALNLVNGYVFKGKPMIIQFG 901
S DAAKS L+VKLMQEGRMRGQAFVTF S+ELAH+ALNLVNGYVFK KPMIIQFG
Sbjct: 411 GSLFGSIDAAKSGLSVKLMQEGRMRGQAFVTFSSVELAHQALNLVNGYVFKDKPMIIQFG 470
Query: 902 RNPVAGKAN 928
RNP A K N
Sbjct: 471 RNPSAAKPN 479
>ref|XP_003548764.1| PREDICTED: RNA-binding protein 40-like [Glycine max]
Length = 456
Score = 314 bits (805), Expect = 4e-83
Identities = 181/308 (58%), Positives = 195/308 (63%)
Frame = +2
Query: 2 PPPDGNILTNIVNTLIAVPRFYTQVLHLMNKMNIPAPFRMXXXXXXXXXXXXXXXXXXXX 181
PPPDGNILTNIVN LIAVPRFYTQVLHLMNKMNIPAPFRM
Sbjct: 163 PPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPEVPALPPPPPA 222
Query: 182 XXXXXXXXXNXXXXXXXXXXXXXXXXNDHNVDKRSFSGGAPSISKHNRKRARREAIVGPA 361
+D V+ R+ K +KRARRE IVGPA
Sbjct: 223 PTVTVNPRS-----ADLSSGESEMESSDEEVEART--------KKSGQKRARRETIVGPA 269
Query: 362 IDKDVAHEAVGLKPATLVPKEIPMIKKKNPVLQIKITPKTTQNXXXXXXXXXXXXXXXXX 541
IDK VAHE+VG+KPATLVPKEIP+IKK N VL+I I PK T
Sbjct: 270 IDKGVAHESVGVKPATLVPKEIPVIKK-NHVLKINIVPKATVKEHKDDDTTQELQEPEKD 328
Query: 542 XXXXVKPFATPEEIERGKLPPEEILSLPMFKNYAAGNPATVLYIKNLSKDVVADDXXXXX 721
K F TP+E+ERGKLPPEEILSLPMFKNY AGNPA VLYIKNL+KDV+ADD
Sbjct: 329 VPDPNK-FFTPDELERGKLPPEEILSLPMFKNYTAGNPAPVLYIKNLAKDVIADDFYFIF 387
Query: 722 XXXXASTDAAKSCLNVKLMQEGRMRGQAFVTFPSIELAHRALNLVNGYVFKGKPMIIQFG 901
S +AAKS L VKLMQEGRMRGQAF+TFPSIELAH ALNLVNGYV KGKPMIIQFG
Sbjct: 388 GSLFGSIEAAKSGLQVKLMQEGRMRGQAFITFPSIELAHHALNLVNGYVLKGKPMIIQFG 447
Query: 902 RNPVAGKA 925
RNP A KA
Sbjct: 448 RNPAAAKA 455
>ref|XP_006853102.1| hypothetical protein AMTR_s00038p00125360 [Amborella trichopoda]
gi|548856741|gb|ERN14569.1| hypothetical protein
AMTR_s00038p00125360 [Amborella trichopoda]
Length = 471
Score = 312 bits (800), Expect = 1e-82
Identities = 169/309 (54%), Positives = 195/309 (63%)
Frame = +2
Query: 2 PPPDGNILTNIVNTLIAVPRFYTQVLHLMNKMNIPAPFRMXXXXXXXXXXXXXXXXXXXX 181
PPPDGNILTNIVN LIAVPRFYTQVLHLMNKMN+PAPFR
Sbjct: 169 PPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNLPAPFRPALRTPPLPSSIPVPPPPPPS 228
Query: 182 XXXXXXXXXNXXXXXXXXXXXXXXXXNDHNVDKRSFSGGAPSISKHNRKRARREAIVGPA 361
++ + D+++ + G+ RKR +R AIVGPA
Sbjct: 229 PPPDPVGVEKPHRADISSDESELESSDEGDTDEKNQTVGSA------RKRVKRVAIVGPA 282
Query: 362 IDKDVAHEAVGLKPATLVPKEIPMIKKKNPVLQIKITPKTTQNXXXXXXXXXXXXXXXXX 541
+DKDV+HEAVG+KP ++VPK I IKKKN VLQIKITPK Q
Sbjct: 283 VDKDVSHEAVGVKPISVVPKGITAIKKKNSVLQIKITPKVVQKEKNEDIDGVEEATEQAD 342
Query: 542 XXXXVKPFATPEEIERGKLPPEEILSLPMFKNYAAGNPATVLYIKNLSKDVVADDXXXXX 721
VKP+ATP+EI+ KLPPEEILSLPMFKNY AGNP+ VLYIKNL+KDVV DD
Sbjct: 343 VALEVKPYATPQEIKAAKLPPEEILSLPMFKNYVAGNPSPVLYIKNLAKDVVRDDIYFIF 402
Query: 722 XXXXASTDAAKSCLNVKLMQEGRMRGQAFVTFPSIELAHRALNLVNGYVFKGKPMIIQFG 901
S +A KS +++KLMQEGRMRGQAFVTFPS ELAH L LVNGYVFKGKPMIIQFG
Sbjct: 403 GSLFGSAEAIKSGIDIKLMQEGRMRGQAFVTFPSTELAHHGLKLVNGYVFKGKPMIIQFG 462
Query: 902 RNPVAGKAN 928
RNP GK++
Sbjct: 463 RNPATGKSS 471
>ref|XP_004984515.1| PREDICTED: RNA-binding protein 40-like [Setaria italica]
Length = 459
Score = 306 bits (784), Expect = 1e-80
Identities = 169/309 (54%), Positives = 189/309 (61%)
Frame = +2
Query: 2 PPPDGNILTNIVNTLIAVPRFYTQVLHLMNKMNIPAPFRMXXXXXXXXXXXXXXXXXXXX 181
PPPDGNIL NIVN LIAVPRFYTQVLHLMNKMN+PAPFRM
Sbjct: 167 PPPDGNILNNIVNALIAVPRFYTQVLHLMNKMNLPAPFRMALPTPPLPSQVSAPPHPPPP 226
Query: 182 XXXXXXXXXNXXXXXXXXXXXXXXXXNDHNVDKRSFSGGAPSISKHNRKRARREAIVGPA 361
D + D+ + K KRA+ EAIVGPA
Sbjct: 227 LQPTTTEEPRSA---------------DLSSDESELESSDDDVDKRKSKRAKHEAIVGPA 271
Query: 362 IDKDVAHEAVGLKPATLVPKEIPMIKKKNPVLQIKITPKTTQNXXXXXXXXXXXXXXXXX 541
+DK VAHEAVG+KPA LV E+ +IKKKNPVLQIKI PK TQ
Sbjct: 272 VDKSVAHEAVGVKPAALVSTELQVIKKKNPVLQIKIAPKATQKEPPIPSTTDKELDSTNE 331
Query: 542 XXXXVKPFATPEEIERGKLPPEEILSLPMFKNYAAGNPATVLYIKNLSKDVVADDXXXXX 721
K F TP+EIE+ KLPPEEILSLPMFKNY GNPA VLYIKNL+KDV DD
Sbjct: 332 QLEE-KHFVTPQEIEKDKLPPEEILSLPMFKNYTPGNPAIVLYIKNLAKDVTHDDFFYVF 390
Query: 722 XXXXASTDAAKSCLNVKLMQEGRMRGQAFVTFPSIELAHRALNLVNGYVFKGKPMIIQFG 901
S D+ +S L++KLMQEGRMRGQAFVTFP++ELA RALNL +GYVFKGKPMIIQFG
Sbjct: 391 GSLFESMDSVRSGLSIKLMQEGRMRGQAFVTFPTVELAQRALNLAHGYVFKGKPMIIQFG 450
Query: 902 RNPVAGKAN 928
RNP A KA+
Sbjct: 451 RNPAANKAS 459
>ref|XP_003624600.1| RNA-binding protein [Medicago truncatula] gi|355499615|gb|AES80818.1|
RNA-binding protein [Medicago truncatula]
Length = 492
Score = 306 bits (783), Expect = 1e-80
Identities = 183/341 (53%), Positives = 198/341 (58%), Gaps = 33/341 (9%)
Frame = +2
Query: 2 PPPDGNILTNIVNTLIAVPRFYTQVLHLMNKMNIPAPFRMXXXXXXXXXXXXXXXXXXXX 181
PPPDGNILTNIVN LIAVPRFYTQVLHLMNKMNIPAPFRM
Sbjct: 165 PPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPPEVPAPLPPVPP 224
Query: 182 XXXXXXXXXNXXXXXXXXXXXXXXXXNDHNVDKRSFSGGAPSISKHNRKRARREAIVGPA 361
+ +D + + S G H RKRARR AIVGPA
Sbjct: 225 PHSVTAMPRSANMS------------SDESEMESSDEEGGARTGNHGRKRARRGAIVGPA 272
Query: 362 IDKDVAHEAVGLKPATLVPKEIPMIKKKNPVLQIKITPKTTQNXXXXXXXXXXXXXXXXX 541
IDKDVAHE+VG+KPATL+PKEIPMIKK N VL+I I PK T N
Sbjct: 273 IDKDVAHESVGVKPATLIPKEIPMIKK-NLVLKINIAPKATLNEHKDNATGIELQETEKD 331
Query: 542 XXXXVKPFATPEEIERGKLPPEEILSLPMFKNYAAGNPATVLYIKNLSKDVVADDXXXXX 721
K F TP+E+ERGKLPPEEILSLP FKNY GNPA+VLYIKNL+KDVVADD
Sbjct: 332 TLDPNK-FLTPDELERGKLPPEEILSLPKFKNYTPGNPASVLYIKNLAKDVVADDFYLLF 390
Query: 722 XXXXASTDAAKSCLNVKLMQEGRMRGQAFVTFPSIELAHRAL------------------ 847
STDAAKS L VKLMQEGRM+GQAF+TFPS ELAH+AL
Sbjct: 391 GSFFGSTDAAKSGLQVKLMQEGRMKGQAFLTFPSTELAHQALAFMFEGFFRHCMLNKKIS 450
Query: 848 ---------------NLVNGYVFKGKPMIIQFGRNPVAGKA 925
NLVNGY FKGKPMIIQFGRNP A KA
Sbjct: 451 SHGTSYFGDRNKHHHNLVNGYKFKGKPMIIQFGRNPAAAKA 491
>gb|EEE58983.1| hypothetical protein OsJ_10687 [Oryza sativa Japonica Group]
Length = 560
Score = 304 bits (778), Expect = 5e-80
Identities = 165/309 (53%), Positives = 191/309 (61%)
Frame = +2
Query: 2 PPPDGNILTNIVNTLIAVPRFYTQVLHLMNKMNIPAPFRMXXXXXXXXXXXXXXXXXXXX 181
PPPDGNILTNIVN LIAVPRFYTQVLHLMNKMN+PAPFRM
Sbjct: 268 PPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNLPAPFRMALPTPPLPSQVPAPPPPPPP 327
Query: 182 XXXXXXXXXNXXXXXXXXXXXXXXXXNDHNVDKRSFSGGAPSISKHNRKRARREAIVGPA 361
+ D + D+ + K KR + EAIVGPA
Sbjct: 328 PQPSAANKPHL---------------TDLSSDESELESSDEDVDKRKVKRTKHEAIVGPA 372
Query: 362 IDKDVAHEAVGLKPATLVPKEIPMIKKKNPVLQIKITPKTTQNXXXXXXXXXXXXXXXXX 541
+DK +AHEAVG+KPA LV E+ +IKKKNPVLQI I PK Q
Sbjct: 373 VDKSIAHEAVGVKPAALVSSELQVIKKKNPVLQINIAPKAAQKELTVQSTTDKELVPTAE 432
Query: 542 XXXXVKPFATPEEIERGKLPPEEILSLPMFKNYAAGNPATVLYIKNLSKDVVADDXXXXX 721
K F TP++IE+ KLPPEEILSLPMFKNY GNPA+VLYIKNL+KDV+ DD
Sbjct: 433 QLQG-KHFVTPQDIEKEKLPPEEILSLPMFKNYTPGNPASVLYIKNLAKDVIQDDFYYVF 491
Query: 722 XXXXASTDAAKSCLNVKLMQEGRMRGQAFVTFPSIELAHRALNLVNGYVFKGKPMIIQFG 901
+ D A+S L++KLMQEGRMRGQAFVTFPS+ELA RALNLV+G+VFKGKPMIIQFG
Sbjct: 492 GSVFENMDIARSSLSIKLMQEGRMRGQAFVTFPSVELAQRALNLVHGFVFKGKPMIIQFG 551
Query: 902 RNPVAGKAN 928
RNP A K++
Sbjct: 552 RNPAANKSS 560
>ref|NP_001049993.1| Os03g0326600 [Oryza sativa Japonica Group]
gi|108707928|gb|ABF95723.1| RNA recognition motif family
protein, expressed [Oryza sativa Japonica Group]
gi|113548464|dbj|BAF11907.1| Os03g0326600 [Oryza sativa
Japonica Group] gi|218192743|gb|EEC75170.1| hypothetical
protein OsI_11395 [Oryza sativa Indica Group]
Length = 467
Score = 304 bits (778), Expect = 5e-80
Identities = 165/309 (53%), Positives = 191/309 (61%)
Frame = +2
Query: 2 PPPDGNILTNIVNTLIAVPRFYTQVLHLMNKMNIPAPFRMXXXXXXXXXXXXXXXXXXXX 181
PPPDGNILTNIVN LIAVPRFYTQVLHLMNKMN+PAPFRM
Sbjct: 175 PPPDGNILTNIVNALIAVPRFYTQVLHLMNKMNLPAPFRMALPTPPLPSQVPAPPPPPPP 234
Query: 182 XXXXXXXXXNXXXXXXXXXXXXXXXXNDHNVDKRSFSGGAPSISKHNRKRARREAIVGPA 361
+ D + D+ + K KR + EAIVGPA
Sbjct: 235 PQPSAANKPHL---------------TDLSSDESELESSDEDVDKRKVKRTKHEAIVGPA 279
Query: 362 IDKDVAHEAVGLKPATLVPKEIPMIKKKNPVLQIKITPKTTQNXXXXXXXXXXXXXXXXX 541
+DK +AHEAVG+KPA LV E+ +IKKKNPVLQI I PK Q
Sbjct: 280 VDKSIAHEAVGVKPAALVSSELQVIKKKNPVLQINIAPKAAQKELTVQSTTDKELVPTAE 339
Query: 542 XXXXVKPFATPEEIERGKLPPEEILSLPMFKNYAAGNPATVLYIKNLSKDVVADDXXXXX 721
K F TP++IE+ KLPPEEILSLPMFKNY GNPA+VLYIKNL+KDV+ DD
Sbjct: 340 QLQG-KHFVTPQDIEKEKLPPEEILSLPMFKNYTPGNPASVLYIKNLAKDVIQDDFYYVF 398
Query: 722 XXXXASTDAAKSCLNVKLMQEGRMRGQAFVTFPSIELAHRALNLVNGYVFKGKPMIIQFG 901
+ D A+S L++KLMQEGRMRGQAFVTFPS+ELA RALNLV+G+VFKGKPMIIQFG
Sbjct: 399 GSVFENMDIARSSLSIKLMQEGRMRGQAFVTFPSVELAQRALNLVHGFVFKGKPMIIQFG 458
Query: 902 RNPVAGKAN 928
RNP A K++
Sbjct: 459 RNPAANKSS 467
>ref|XP_004230890.1| PREDICTED: RNA-binding protein 40-like isoform 1 [Solanum
lycopersicum]
Length = 448
Score = 303 bits (775), Expect = 1e-79
Identities = 164/309 (53%), Positives = 191/309 (61%)
Frame = +2
Query: 2 PPPDGNILTNIVNTLIAVPRFYTQVLHLMNKMNIPAPFRMXXXXXXXXXXXXXXXXXXXX 181
PPPDG+ILTNIVN LIAVPRFYTQVLHLMNKMNIPAPFRM
Sbjct: 155 PPPDGHILTNIVNALIAVPRFYTQVLHLMNKMNIPAPFRMALPTPPLPTSLSVPPPPPPP 214
Query: 182 XXXXXXXXXNXXXXXXXXXXXXXXXXNDHNVDKRSFSGGAPSISKHNRKRARREAIVGPA 361
+ + S A + +KR R EAI+GPA
Sbjct: 215 PAPIVSKSR-------------MEDLSSSESEMESSDEEATIVGGPKKKRIRHEAILGPA 261
Query: 362 IDKDVAHEAVGLKPATLVPKEIPMIKKKNPVLQIKITPKTTQNXXXXXXXXXXXXXXXXX 541
+DKDV HEAVGL+ A LVPKE+P++KKKNP++QIK+TPK QN
Sbjct: 262 VDKDVGHEAVGLRAAALVPKEMPVVKKKNPIIQIKVTPKQVQNEEKGDASALSLTLEEKE 321
Query: 542 XXXXVKPFATPEEIERGKLPPEEILSLPMFKNYAAGNPATVLYIKNLSKDVVADDXXXXX 721
KPF T EE++ G+LPPEEILSLPMFKNY AGNP+ +LY+KNL+K+V+ DD
Sbjct: 322 NDH--KPFTTLEELKSGRLPPEEILSLPMFKNYCAGNPSQILYLKNLAKEVIVDDIYFIF 379
Query: 722 XXXXASTDAAKSCLNVKLMQEGRMRGQAFVTFPSIELAHRALNLVNGYVFKGKPMIIQFG 901
S D AKS L VKLMQEGRMRGQAFVTFPSIELA ALNLVNGYVFKGKP++IQFG
Sbjct: 380 GSLFVSIDEAKSSLAVKLMQEGRMRGQAFVTFPSIELAQNALNLVNGYVFKGKPVVIQFG 439
Query: 902 RNPVAGKAN 928
R+P K +
Sbjct: 440 RDPAKAKTS 448