BLASTX nr result

ID: Cocculus22_contig00024463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00024463
         (405 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68790.1| hypothetical protein VITISV_001365 [Vitis vinifera]    61   1e-07
ref|XP_002263617.1| PREDICTED: protein SRG1 [Vitis vinifera] gi|...    57   3e-06
ref|XP_002263289.1| PREDICTED: protein SRG1-like [Vitis vinifera]      55   1e-05

>emb|CAN68790.1| hypothetical protein VITISV_001365 [Vitis vinifera]
          Length = 357

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 31/80 (38%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
 Frame = +3

Query: 111 TLLP--SKPAQEIAIGSREPPPRYIRKEIDERPIDDS-SSTALPVVDLHILSSPSSSVQE 281
           T++P  ++  QE+++   EPPP+Y  KE   +P+D    S  +P++D+ +LSS S S + 
Sbjct: 8   TVVPPLAQSVQEMSVNGNEPPPQYFLKENSIQPMDSFLPSDPIPIIDISLLSSSSLSSKG 67

Query: 282 KDAEMEKLKTALVSFGFFQV 341
            + E++KLK+ L+S+G FQV
Sbjct: 68  GEEELQKLKSTLISWGCFQV 87


>ref|XP_002263617.1| PREDICTED: protein SRG1 [Vitis vinifera]
           gi|147790901|emb|CAN77231.1| hypothetical protein
           VITISV_002774 [Vitis vinifera]
           gi|296084536|emb|CBI25557.3| unnamed protein product
           [Vitis vinifera]
          Length = 356

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/79 (36%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
 Frame = +3

Query: 111 TLLP--SKPAQEIAIGSREPPPRYIRKEIDERPIDDS-SSTALPVVDLHILSSPSSSVQE 281
           T++P  ++  QE+++   EPPP+Y  KE   +P+D    S  +P++D+ +LSS S S + 
Sbjct: 8   TVVPPLAQSVQEMSVNGNEPPPQYFLKENSIQPMDSYLPSDPIPIIDISLLSSSSLSSKG 67

Query: 282 KDAEMEKLKTALVSFGFFQ 338
            + E++K K+ L S+G FQ
Sbjct: 68  GEEELQKFKSTLTSWGCFQ 86


>ref|XP_002263289.1| PREDICTED: protein SRG1-like [Vitis vinifera]
          Length = 361

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
 Frame = +3

Query: 135 QEIAIGSREPPPRYIRKEIDERPIDD-SSSTALPVVDLHILSSPS--SSVQEKDAEMEKL 305
           QE+++   EPPP+Y  KE    P+D    S  +P++D+ +LSS S  SS   ++ E++KL
Sbjct: 18  QEMSMNGNEPPPQYFLKENSIHPMDSFLPSDPIPIIDISLLSSSSSLSSRGGEEEELQKL 77

Query: 306 KTALVSFGFFQ 338
           K+AL S+G FQ
Sbjct: 78  KSALTSWGCFQ 88


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