BLASTX nr result
ID: Cocculus22_contig00024218
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00024218
(388 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003572619.1| PREDICTED: zinc finger CCCH domain-containin... 105 5e-21
gb|EMT04775.1| Zinc finger CCCH domain-containing protein 16 [Ae... 105 7e-21
ref|XP_006836876.1| hypothetical protein AMTR_s00099p00102890 [A... 103 2e-20
gb|AEV45842.1| rough endosperm 3 epsilon isoform [Zea mays] 103 2e-20
gb|AEV45823.1| rough endosperm 3-umu1 alpha isoform [Zea mays] 103 2e-20
ref|NP_001241852.1| RGH3 splicing factor [Zea mays] gi|330470888... 103 2e-20
ref|XP_006494300.1| PREDICTED: zinc finger CCCH domain-containin... 102 4e-20
ref|XP_006494299.1| PREDICTED: zinc finger CCCH domain-containin... 102 4e-20
ref|XP_006431454.1| hypothetical protein CICLE_v10003415mg, part... 102 4e-20
ref|XP_007023104.1| Zinc finger C-x8-C-x5-C-x3-H type family pro... 102 6e-20
ref|XP_007023103.1| Zinc finger C-x8-C-x5-C-x3-H type family pro... 102 6e-20
ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247... 102 6e-20
ref|XP_004952780.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 102 7e-20
ref|NP_172503.1| zinc finger CCCH domain-containing protein 5 [A... 101 9e-20
ref|XP_002892559.1| hypothetical protein ARALYDRAFT_471143 [Arab... 101 1e-19
ref|XP_006585389.1| PREDICTED: zinc finger CCCH domain-containin... 99 5e-19
ref|XP_003532902.2| PREDICTED: zinc finger CCCH domain-containin... 99 5e-19
gb|EEE57196.1| hypothetical protein OsJ_07143 [Oryza sativa Japo... 99 5e-19
gb|EEC73406.1| hypothetical protein OsI_07661 [Oryza sativa Indi... 99 5e-19
sp|Q6YVX9.2|C3H16_ORYSJ RecName: Full=Zinc finger CCCH domain-co... 99 5e-19
>ref|XP_003572619.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
[Brachypodium distachyon]
Length = 748
Score = 105 bits (263), Expect = 5e-21
Identities = 55/89 (61%), Positives = 63/89 (70%)
Frame = -1
Query: 271 CLLLAYPGLMNVLFDRGLLLANDLDLQYTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVC 92
C LL + N+ GL L D L++TD EDVHTEFLKFGE+VNFKVC
Sbjct: 238 CTLL----MKNMYNGPGLALEQDEGLEFTDEEVEQSYEEFYEDVHTEFLKFGELVNFKVC 293
Query: 91 RNGSFHLRGNVYVHYKSLESAILAYNSIN 5
RNGSFHLRGNVYVHYKSL+SA+LAYNS+N
Sbjct: 294 RNGSFHLRGNVYVHYKSLDSALLAYNSMN 322
>gb|EMT04775.1| Zinc finger CCCH domain-containing protein 16 [Aegilops tauschii]
Length = 837
Score = 105 bits (262), Expect = 7e-21
Identities = 54/89 (60%), Positives = 64/89 (71%)
Frame = -1
Query: 271 CLLLAYPGLMNVLFDRGLLLANDLDLQYTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVC 92
C LL + N+ GL+L D L++TD EDVHTEFLKFGE+VNFKVC
Sbjct: 134 CTLL----MKNMYNGPGLVLEQDEGLEFTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVC 189
Query: 91 RNGSFHLRGNVYVHYKSLESAILAYNSIN 5
RNGSFHLRGNVYVHYK+L+SA+LAYNS+N
Sbjct: 190 RNGSFHLRGNVYVHYKALDSALLAYNSMN 218
>ref|XP_006836876.1| hypothetical protein AMTR_s00099p00102890 [Amborella trichopoda]
gi|548839440|gb|ERM99729.1| hypothetical protein
AMTR_s00099p00102890 [Amborella trichopoda]
Length = 760
Score = 103 bits (257), Expect = 2e-20
Identities = 56/89 (62%), Positives = 61/89 (68%)
Frame = -1
Query: 271 CLLLAYPGLMNVLFDRGLLLANDLDLQYTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVC 92
C LL + N+ GL D L+YTD EDVHTEFLKFGEIVNFKVC
Sbjct: 232 CTLL----IKNMYNGPGLAWEQDEGLEYTDEEMERSYEEFYEDVHTEFLKFGEIVNFKVC 287
Query: 91 RNGSFHLRGNVYVHYKSLESAILAYNSIN 5
RNGS HLRGNVYVHY+SL+SAILAYNSIN
Sbjct: 288 RNGSSHLRGNVYVHYRSLDSAILAYNSIN 316
>gb|AEV45842.1| rough endosperm 3 epsilon isoform [Zea mays]
Length = 368
Score = 103 bits (257), Expect = 2e-20
Identities = 51/81 (62%), Positives = 60/81 (74%)
Frame = -1
Query: 247 LMNVLFDRGLLLANDLDLQYTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVCRNGSFHLR 68
+ N+ GL L D L++TD EDVHTEFLKFGE+VNFKVCRNGSFHLR
Sbjct: 256 MKNMYNGPGLALEQDEGLEFTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFHLR 315
Query: 67 GNVYVHYKSLESAILAYNSIN 5
GNVYVHYKSL+SA+LAY+S+N
Sbjct: 316 GNVYVHYKSLDSALLAYSSMN 336
>gb|AEV45823.1| rough endosperm 3-umu1 alpha isoform [Zea mays]
Length = 790
Score = 103 bits (257), Expect = 2e-20
Identities = 51/81 (62%), Positives = 60/81 (74%)
Frame = -1
Query: 247 LMNVLFDRGLLLANDLDLQYTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVCRNGSFHLR 68
+ N+ GL L D L++TD EDVHTEFLKFGE+VNFKVCRNGSFHLR
Sbjct: 291 MKNMYNGPGLALEQDEGLEFTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFHLR 350
Query: 67 GNVYVHYKSLESAILAYNSIN 5
GNVYVHYKSL+SA+LAY+S+N
Sbjct: 351 GNVYVHYKSLDSALLAYSSMN 371
>ref|NP_001241852.1| RGH3 splicing factor [Zea mays] gi|330470888|gb|AEC32092.1| RGH3
splicing factor [Zea mays] gi|356609668|gb|AET25330.1|
RGH3/ZmURP alpha protein isoform [Zea mays]
gi|359392836|gb|AEV45825.1| rough endosperm 3 alpha
isoform [Zea mays]
Length = 755
Score = 103 bits (257), Expect = 2e-20
Identities = 51/81 (62%), Positives = 60/81 (74%)
Frame = -1
Query: 247 LMNVLFDRGLLLANDLDLQYTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVCRNGSFHLR 68
+ N+ GL L D L++TD EDVHTEFLKFGE+VNFKVCRNGSFHLR
Sbjct: 256 MKNMYNGPGLALEQDEGLEFTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFHLR 315
Query: 67 GNVYVHYKSLESAILAYNSIN 5
GNVYVHYKSL+SA+LAY+S+N
Sbjct: 316 GNVYVHYKSLDSALLAYSSMN 336
>ref|XP_006494300.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
isoform X2 [Citrus sinensis]
Length = 829
Score = 102 bits (255), Expect = 4e-20
Identities = 55/89 (61%), Positives = 60/89 (67%)
Frame = -1
Query: 271 CLLLAYPGLMNVLFDRGLLLANDLDLQYTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVC 92
C LL + N+ GL D L+YTD EDVHTEFLKFGEIVNFKVC
Sbjct: 244 CTLL----IKNMYNGPGLAWEQDEGLEYTDEEVECSYEEFYEDVHTEFLKFGEIVNFKVC 299
Query: 91 RNGSFHLRGNVYVHYKSLESAILAYNSIN 5
RNGS HLRGNVYVHYKSLESA+LAY S+N
Sbjct: 300 RNGSSHLRGNVYVHYKSLESAVLAYRSVN 328
>ref|XP_006494299.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
isoform X1 [Citrus sinensis]
Length = 836
Score = 102 bits (255), Expect = 4e-20
Identities = 55/89 (61%), Positives = 60/89 (67%)
Frame = -1
Query: 271 CLLLAYPGLMNVLFDRGLLLANDLDLQYTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVC 92
C LL + N+ GL D L+YTD EDVHTEFLKFGEIVNFKVC
Sbjct: 251 CTLL----IKNMYNGPGLAWEQDEGLEYTDEEVECSYEEFYEDVHTEFLKFGEIVNFKVC 306
Query: 91 RNGSFHLRGNVYVHYKSLESAILAYNSIN 5
RNGS HLRGNVYVHYKSLESA+LAY S+N
Sbjct: 307 RNGSSHLRGNVYVHYKSLESAVLAYRSVN 335
>ref|XP_006431454.1| hypothetical protein CICLE_v10003415mg, partial [Citrus clementina]
gi|557533576|gb|ESR44694.1| hypothetical protein
CICLE_v10003415mg, partial [Citrus clementina]
Length = 755
Score = 102 bits (255), Expect = 4e-20
Identities = 55/89 (61%), Positives = 60/89 (67%)
Frame = -1
Query: 271 CLLLAYPGLMNVLFDRGLLLANDLDLQYTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVC 92
C LL + N+ GL D L+YTD EDVHTEFLKFGEIVNFKVC
Sbjct: 198 CTLL----IKNMYNGPGLAWEQDEGLEYTDEEVERSYEEFYEDVHTEFLKFGEIVNFKVC 253
Query: 91 RNGSFHLRGNVYVHYKSLESAILAYNSIN 5
RNGS HLRGNVYVHYKSLESA+LAY S+N
Sbjct: 254 RNGSSHLRGNVYVHYKSLESAVLAYRSVN 282
>ref|XP_007023104.1| Zinc finger C-x8-C-x5-C-x3-H type family protein isoform 3
[Theobroma cacao] gi|508778470|gb|EOY25726.1| Zinc
finger C-x8-C-x5-C-x3-H type family protein isoform 3
[Theobroma cacao]
Length = 850
Score = 102 bits (254), Expect = 6e-20
Identities = 54/89 (60%), Positives = 61/89 (68%)
Frame = -1
Query: 271 CLLLAYPGLMNVLFDRGLLLANDLDLQYTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVC 92
C LL + N+ GL D L+YTD EDVHTEFLKFGEIVNFKVC
Sbjct: 243 CTLL----MRNMYNGPGLAWEQDEGLEYTDEEVERCYEEFYEDVHTEFLKFGEIVNFKVC 298
Query: 91 RNGSFHLRGNVYVHYKSLESAILAYNSIN 5
+NG+FHLRGNVYVHYK LESA+LAY+SIN
Sbjct: 299 KNGAFHLRGNVYVHYKMLESAVLAYHSIN 327
>ref|XP_007023103.1| Zinc finger C-x8-C-x5-C-x3-H type family protein isoform 2
[Theobroma cacao] gi|508778469|gb|EOY25725.1| Zinc
finger C-x8-C-x5-C-x3-H type family protein isoform 2
[Theobroma cacao]
Length = 855
Score = 102 bits (254), Expect = 6e-20
Identities = 54/89 (60%), Positives = 61/89 (68%)
Frame = -1
Query: 271 CLLLAYPGLMNVLFDRGLLLANDLDLQYTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVC 92
C LL + N+ GL D L+YTD EDVHTEFLKFGEIVNFKVC
Sbjct: 248 CTLL----MRNMYNGPGLAWEQDEGLEYTDEEVERCYEEFYEDVHTEFLKFGEIVNFKVC 303
Query: 91 RNGSFHLRGNVYVHYKSLESAILAYNSIN 5
+NG+FHLRGNVYVHYK LESA+LAY+SIN
Sbjct: 304 KNGAFHLRGNVYVHYKMLESAVLAYHSIN 332
>ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera]
Length = 887
Score = 102 bits (254), Expect = 6e-20
Identities = 55/89 (61%), Positives = 61/89 (68%)
Frame = -1
Query: 271 CLLLAYPGLMNVLFDRGLLLANDLDLQYTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVC 92
C LL + N+ GL D L+YTD EDV TEFLKFGEIVNFKVC
Sbjct: 232 CTLL----IKNMYNGPGLAWEQDEGLEYTDEEVERCYEEFYEDVQTEFLKFGEIVNFKVC 287
Query: 91 RNGSFHLRGNVYVHYKSLESAILAYNSIN 5
RNGSFHLRGNVYVHYKSL+SA+LAY+SIN
Sbjct: 288 RNGSFHLRGNVYVHYKSLDSAVLAYHSIN 316
>ref|XP_004952780.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 16-like [Setaria italica]
Length = 759
Score = 102 bits (253), Expect = 7e-20
Identities = 50/81 (61%), Positives = 59/81 (72%)
Frame = -1
Query: 247 LMNVLFDRGLLLANDLDLQYTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVCRNGSFHLR 68
+ N+ GL L D L++TD EDVHTEFLKFGE+ NFKVCRNGSFHLR
Sbjct: 257 MKNMYNGPGLALEQDEGLEFTDEEIEQSYEEFYEDVHTEFLKFGELANFKVCRNGSFHLR 316
Query: 67 GNVYVHYKSLESAILAYNSIN 5
GNVYVHYKSL+SA+LAY+S+N
Sbjct: 317 GNVYVHYKSLDSALLAYSSMN 337
>ref|NP_172503.1| zinc finger CCCH domain-containing protein 5 [Arabidopsis thaliana]
gi|229621703|sp|Q9SY74.2|C3H5_ARATH RecName: Full=Zinc
finger CCCH domain-containing protein 5; Short=AtC3H5
gi|332190444|gb|AEE28565.1| zinc finger CCCH
domain-containing protein 5 [Arabidopsis thaliana]
Length = 757
Score = 101 bits (252), Expect = 9e-20
Identities = 53/89 (59%), Positives = 61/89 (68%)
Frame = -1
Query: 271 CLLLAYPGLMNVLFDRGLLLANDLDLQYTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVC 92
C LL + N+ G+ D L+YTD EDVHTEFLK+GE+VNFKVC
Sbjct: 272 CTLL----MKNMYNGPGITWEQDEGLEYTDEEAELCYEEFYEDVHTEFLKYGELVNFKVC 327
Query: 91 RNGSFHLRGNVYVHYKSLESAILAYNSIN 5
RNGSFHL+GNVYVHY+SLESAILAY SIN
Sbjct: 328 RNGSFHLKGNVYVHYRSLESAILAYQSIN 356
>ref|XP_002892559.1| hypothetical protein ARALYDRAFT_471143 [Arabidopsis lyrata subsp.
lyrata] gi|297338401|gb|EFH68818.1| hypothetical protein
ARALYDRAFT_471143 [Arabidopsis lyrata subsp. lyrata]
Length = 772
Score = 101 bits (251), Expect = 1e-19
Identities = 52/89 (58%), Positives = 61/89 (68%)
Frame = -1
Query: 271 CLLLAYPGLMNVLFDRGLLLANDLDLQYTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVC 92
C LL + N+ G+ D L+YTD EDVHTEFLK+GE++NFKVC
Sbjct: 272 CTLL----MKNMYNGPGIAWEQDEGLEYTDEEAEHCYEEFYEDVHTEFLKYGELINFKVC 327
Query: 91 RNGSFHLRGNVYVHYKSLESAILAYNSIN 5
RNGSFHL+GNVYVHY+SLESAILAY SIN
Sbjct: 328 RNGSFHLKGNVYVHYRSLESAILAYQSIN 356
>ref|XP_006585389.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
isoform X2 [Glycine max]
Length = 598
Score = 99.4 bits (246), Expect = 5e-19
Identities = 51/83 (61%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Frame = -1
Query: 247 LMNVLFDRGLLLANDLD--LQYTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVCRNGSFH 74
+ N+ GL D D L+YTD EDVHTEFLKFGEIVNFKVC+NGSFH
Sbjct: 217 IKNMYSGPGLACDQDQDEGLEYTDEEVERCFEEFYEDVHTEFLKFGEIVNFKVCKNGSFH 276
Query: 73 LRGNVYVHYKSLESAILAYNSIN 5
LRGNVYV YKSL+SA+LAYN++N
Sbjct: 277 LRGNVYVQYKSLDSALLAYNTVN 299
>ref|XP_003532902.2| PREDICTED: zinc finger CCCH domain-containing protein 5-like
isoform X1 [Glycine max]
Length = 599
Score = 99.4 bits (246), Expect = 5e-19
Identities = 51/83 (61%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Frame = -1
Query: 247 LMNVLFDRGLLLANDLD--LQYTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVCRNGSFH 74
+ N+ GL D D L+YTD EDVHTEFLKFGEIVNFKVC+NGSFH
Sbjct: 218 IKNMYSGPGLACDQDQDEGLEYTDEEVERCFEEFYEDVHTEFLKFGEIVNFKVCKNGSFH 277
Query: 73 LRGNVYVHYKSLESAILAYNSIN 5
LRGNVYV YKSL+SA+LAYN++N
Sbjct: 278 LRGNVYVQYKSLDSALLAYNTVN 300
>gb|EEE57196.1| hypothetical protein OsJ_07143 [Oryza sativa Japonica Group]
Length = 635
Score = 99.4 bits (246), Expect = 5e-19
Identities = 52/89 (58%), Positives = 61/89 (68%)
Frame = -1
Query: 271 CLLLAYPGLMNVLFDRGLLLANDLDLQYTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVC 92
C LL + N+ GL L D L+ TD EDVHTEFLKFGE+VNFKVC
Sbjct: 152 CTLL----MRNMYSGPGLALEQDEGLECTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVC 207
Query: 91 RNGSFHLRGNVYVHYKSLESAILAYNSIN 5
RNGS HLRGNVYVHYKSL+SA++AY+S+N
Sbjct: 208 RNGSLHLRGNVYVHYKSLDSALIAYSSMN 236
>gb|EEC73406.1| hypothetical protein OsI_07661 [Oryza sativa Indica Group]
Length = 731
Score = 99.4 bits (246), Expect = 5e-19
Identities = 52/89 (58%), Positives = 61/89 (68%)
Frame = -1
Query: 271 CLLLAYPGLMNVLFDRGLLLANDLDLQYTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVC 92
C LL + N+ GL L D L+ TD EDVHTEFLKFGE+VNFKVC
Sbjct: 248 CTLL----MRNMYSGPGLALEQDEGLECTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVC 303
Query: 91 RNGSFHLRGNVYVHYKSLESAILAYNSIN 5
RNGS HLRGNVYVHYKSL+SA++AY+S+N
Sbjct: 304 RNGSLHLRGNVYVHYKSLDSALIAYSSMN 332
>sp|Q6YVX9.2|C3H16_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 16;
Short=OsC3H16
Length = 678
Score = 99.4 bits (246), Expect = 5e-19
Identities = 52/89 (58%), Positives = 61/89 (68%)
Frame = -1
Query: 271 CLLLAYPGLMNVLFDRGLLLANDLDLQYTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVC 92
C LL + N+ GL L D L+ TD EDVHTEFLKFGE+VNFKVC
Sbjct: 195 CTLL----MRNMYSGPGLALEQDEGLECTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVC 250
Query: 91 RNGSFHLRGNVYVHYKSLESAILAYNSIN 5
RNGS HLRGNVYVHYKSL+SA++AY+S+N
Sbjct: 251 RNGSLHLRGNVYVHYKSLDSALIAYSSMN 279