BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00024196
         (494 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-li...   264   8e-69
emb|CBI24290.3| unnamed protein product [Vitis vinifera]              264   8e-69
ref|XP_007010535.1| Replication factor C subunit 1 [Theobroma ca...   254   1e-65
gb|EYU22111.1| hypothetical protein MIMGU_mgv1a000730mg [Mimulus...   253   2e-65
gb|EXB57307.1| Replication factor C subunit 1 [Morus notabilis]       253   3e-65
ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-li...   251   6e-65
ref|XP_006487829.1| PREDICTED: replication factor C subunit 1-li...   249   3e-64
ref|XP_006424055.1| hypothetical protein CICLE_v10027762mg [Citr...   249   4e-64
gb|EYU22986.1| hypothetical protein MIMGU_mgv1a0010613mg, partia...   247   1e-63
ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana] gi...   246   2e-63
ref|XP_007199003.1| hypothetical protein PRUPE_ppa000922mg [Prun...   246   2e-63
ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-li...   246   2e-63
ref|XP_006400706.1| hypothetical protein EUTSA_v10012587mg [Eutr...   245   4e-63
dbj|BAJ33988.1| unnamed protein product [Thellungiella halophila]     245   4e-63
ref|XP_004979519.1| PREDICTED: replication factor C subunit 1-li...   244   7e-63
ref|XP_002874040.1| AAA-type ATPase family protein [Arabidopsis ...   244   9e-63
ref|XP_006826419.1| hypothetical protein AMTR_s00004p00160120 [A...   243   2e-62
ref|XP_006663537.1| PREDICTED: replication factor C subunit 1-li...   243   3e-62
dbj|BAC76085.1| replication factor C 110 kDa subunit [Oryza sati...   242   3e-62
gb|EEE52306.1| hypothetical protein OsJ_34316 [Oryza sativa Japo...   242   4e-62

>ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-like [Vitis vinifera]
          Length = 933

 Score =  264 bits (675), Expect = 8e-69
 Identities = 129/151 (85%), Positives = 141/151 (93%)
 Frame = +3

Query: 42  ALTWTEKYKPKVPNDIIGNQSLVKQLHDWLVHWNDNFLHTGPKGKGKKQIDNGSKKAVLL 221
           +LTWTEKYKPKVPNDIIGNQSLVKQLH+WL HWN+ FLHTG KGKGKKQ D+G+KKAVLL
Sbjct: 313 SLTWTEKYKPKVPNDIIGNQSLVKQLHEWLAHWNEQFLHTGTKGKGKKQNDSGAKKAVLL 372

Query: 222 SGSPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKILKGIGGSTANSVKELVSNESL 401
           SG+PGIGKTTSAKLVSQMLGFQAIEVNASD+RGKA++KI KGIGGS ANS+KELVSNE+L
Sbjct: 373 SGTPGIGKTTSAKLVSQMLGFQAIEVNASDNRGKANAKIDKGIGGSNANSIKELVSNEAL 432

Query: 402 SVKMDWSKHPKSVLIMDEVDGMSAGDRGGVA 494
              MD SKHPK+VLIMDEVDGMSAGDRGGVA
Sbjct: 433 GAHMDRSKHPKTVLIMDEVDGMSAGDRGGVA 463


>emb|CBI24290.3| unnamed protein product [Vitis vinifera]
          Length = 941

 Score =  264 bits (675), Expect = 8e-69
 Identities = 129/151 (85%), Positives = 141/151 (93%)
 Frame = +3

Query: 42  ALTWTEKYKPKVPNDIIGNQSLVKQLHDWLVHWNDNFLHTGPKGKGKKQIDNGSKKAVLL 221
           +LTWTEKYKPKVPNDIIGNQSLVKQLH+WL HWN+ FLHTG KGKGKKQ D+G+KKAVLL
Sbjct: 321 SLTWTEKYKPKVPNDIIGNQSLVKQLHEWLAHWNEQFLHTGTKGKGKKQNDSGAKKAVLL 380

Query: 222 SGSPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKILKGIGGSTANSVKELVSNESL 401
           SG+PGIGKTTSAKLVSQMLGFQAIEVNASD+RGKA++KI KGIGGS ANS+KELVSNE+L
Sbjct: 381 SGTPGIGKTTSAKLVSQMLGFQAIEVNASDNRGKANAKIDKGIGGSNANSIKELVSNEAL 440

Query: 402 SVKMDWSKHPKSVLIMDEVDGMSAGDRGGVA 494
              MD SKHPK+VLIMDEVDGMSAGDRGGVA
Sbjct: 441 GAHMDRSKHPKTVLIMDEVDGMSAGDRGGVA 471


>ref|XP_007010535.1| Replication factor C subunit 1 [Theobroma cacao]
           gi|508727448|gb|EOY19345.1| Replication factor C subunit
           1 [Theobroma cacao]
          Length = 1012

 Score =  254 bits (648), Expect = 1e-65
 Identities = 125/154 (81%), Positives = 138/154 (89%)
 Frame = +3

Query: 33  QVDALTWTEKYKPKVPNDIIGNQSLVKQLHDWLVHWNDNFLHTGPKGKGKKQIDNGSKKA 212
           Q  +LTWTEKY+PKVPN++ GNQSLV QLH+WL HWN+ FL TG KGKGKKQ D G+KKA
Sbjct: 334 QHSSLTWTEKYRPKVPNEMTGNQSLVNQLHNWLAHWNEQFLGTGSKGKGKKQNDPGAKKA 393

Query: 213 VLLSGSPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKILKGIGGSTANSVKELVSN 392
           VLLSG+PGIGKTTSAKLVSQMLGFQ IEVNASDSRGKAD+KI KGIGGS ANS+KELVSN
Sbjct: 394 VLLSGTPGIGKTTSAKLVSQMLGFQTIEVNASDSRGKADAKISKGIGGSNANSIKELVSN 453

Query: 393 ESLSVKMDWSKHPKSVLIMDEVDGMSAGDRGGVA 494
           E+LSV MD SKH K+VLIMDEVDGMSAGDRGG+A
Sbjct: 454 EALSVNMDRSKHVKTVLIMDEVDGMSAGDRGGIA 487


>gb|EYU22111.1| hypothetical protein MIMGU_mgv1a000730mg [Mimulus guttatus]
          Length = 1000

 Score =  253 bits (646), Expect = 2e-65
 Identities = 129/161 (80%), Positives = 144/161 (89%), Gaps = 3/161 (1%)
 Frame = +3

Query: 21  KRRDQVDALT---WTEKYKPKVPNDIIGNQSLVKQLHDWLVHWNDNFLHTGPKGKGKKQI 191
           KR++Q  A T   WTEKY+PKVPNDI+GNQSLVKQLHDWLV WN+ FL+TG K KGKKQ 
Sbjct: 370 KRKNQPAAQTSLPWTEKYRPKVPNDIVGNQSLVKQLHDWLVSWNEQFLNTGKKEKGKKQS 429

Query: 192 DNGSKKAVLLSGSPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKILKGIGGSTANS 371
           D+G KKAVLLSG+PGIGKTTSAKL+SQMLGFQAIEVNASDSRGKAD+KI KGIGGST+NS
Sbjct: 430 DSGPKKAVLLSGTPGIGKTTSAKLISQMLGFQAIEVNASDSRGKADAKIQKGIGGSTSNS 489

Query: 372 VKELVSNESLSVKMDWSKHPKSVLIMDEVDGMSAGDRGGVA 494
           VKELVSNESLS KM+ ++  K+VLIMDEVDGMSAGDRGGVA
Sbjct: 490 VKELVSNESLSHKMERTQQQKTVLIMDEVDGMSAGDRGGVA 530


>gb|EXB57307.1| Replication factor C subunit 1 [Morus notabilis]
          Length = 1047

 Score =  253 bits (645), Expect = 3e-65
 Identities = 126/151 (83%), Positives = 135/151 (89%)
 Frame = +3

Query: 42  ALTWTEKYKPKVPNDIIGNQSLVKQLHDWLVHWNDNFLHTGPKGKGKKQIDNGSKKAVLL 221
           ALTWTEKYKPKV NDIIGNQSLVKQLH WL +W++ FL  G K KGKK  D G KKAVLL
Sbjct: 428 ALTWTEKYKPKVTNDIIGNQSLVKQLHYWLANWHEQFLDAGSKKKGKKANDPGVKKAVLL 487

Query: 222 SGSPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKILKGIGGSTANSVKELVSNESL 401
           SG+PGIGKTTSAKLVSQMLGFQ IEVNASDSRGKAD+KI KGIGGS ANS+KELVSNE+L
Sbjct: 488 SGTPGIGKTTSAKLVSQMLGFQMIEVNASDSRGKADAKIEKGIGGSNANSIKELVSNEAL 547

Query: 402 SVKMDWSKHPKSVLIMDEVDGMSAGDRGGVA 494
           SV MDWSKHPK+VLIMDEVDGMSAGDRGG+A
Sbjct: 548 SVNMDWSKHPKTVLIMDEVDGMSAGDRGGIA 578


>ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
          Length = 981

 Score =  251 bits (642), Expect = 6e-65
 Identities = 126/166 (75%), Positives = 141/166 (84%), Gaps = 3/166 (1%)
 Frame = +3

Query: 6   GTSPAKRRD---QVDALTWTEKYKPKVPNDIIGNQSLVKQLHDWLVHWNDNFLHTGPKGK 176
           G SPAK++    +   LTWTEKY+PKVPNDIIGNQSLVKQLHDWL HWN+NFL  G K K
Sbjct: 334 GASPAKQKSGTAEFSNLTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKK 393

Query: 177 GKKQIDNGSKKAVLLSGSPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKILKGIGG 356
            KK  D+G+KKAVLL G PGIGKTTSAKLVSQMLGF+AIEVNASD+RGK+D+KI KGIGG
Sbjct: 394 VKKASDSGAKKAVLLCGGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGG 453

Query: 357 STANSVKELVSNESLSVKMDWSKHPKSVLIMDEVDGMSAGDRGGVA 494
           S ANS+KEL+SNESL  KM+  KH K+VLIMDEVDGMSAGDRGGVA
Sbjct: 454 SNANSIKELISNESLHFKMNQPKHHKTVLIMDEVDGMSAGDRGGVA 499


>ref|XP_006487829.1| PREDICTED: replication factor C subunit 1-like isoform X1 [Citrus
           sinensis] gi|568869228|ref|XP_006487830.1| PREDICTED:
           replication factor C subunit 1-like isoform X2 [Citrus
           sinensis]
          Length = 958

 Score =  249 bits (636), Expect = 3e-64
 Identities = 123/164 (75%), Positives = 139/164 (84%), Gaps = 3/164 (1%)
 Frame = +3

Query: 12  SPAKRRDQ---VDALTWTEKYKPKVPNDIIGNQSLVKQLHDWLVHWNDNFLHTGPKGKGK 182
           SPAKR+ Q     +LTWTEKY+PK PN+I+GNQ LVKQLH WL HWN+ FL TG K  GK
Sbjct: 330 SPAKRKGQNIQQSSLTWTEKYRPKTPNEIVGNQQLVKQLHTWLAHWNEKFLDTGTKRNGK 389

Query: 183 KQIDNGSKKAVLLSGSPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKILKGIGGST 362
           KQ D  ++KA +LSGSPG+GKTT+AKLV QMLGFQAIEVNASDSRGKAD+KI KGIGGS 
Sbjct: 390 KQNDASAEKAAILSGSPGMGKTTAAKLVCQMLGFQAIEVNASDSRGKADAKISKGIGGSN 449

Query: 363 ANSVKELVSNESLSVKMDWSKHPKSVLIMDEVDGMSAGDRGGVA 494
           ANS+KELVSNE+LS  MD SKHPK+VLIMDEVDGMSAGDRGG+A
Sbjct: 450 ANSIKELVSNEALSANMDRSKHPKTVLIMDEVDGMSAGDRGGIA 493


>ref|XP_006424055.1| hypothetical protein CICLE_v10027762mg [Citrus clementina]
           gi|557525989|gb|ESR37295.1| hypothetical protein
           CICLE_v10027762mg [Citrus clementina]
          Length = 958

 Score =  249 bits (635), Expect = 4e-64
 Identities = 124/164 (75%), Positives = 138/164 (84%), Gaps = 3/164 (1%)
 Frame = +3

Query: 12  SPAKRRDQ---VDALTWTEKYKPKVPNDIIGNQSLVKQLHDWLVHWNDNFLHTGPKGKGK 182
           SPAKR+ Q      LTWTEKY+PK PN+I+GNQ LVKQLH WL HWN+ FL TG K  GK
Sbjct: 330 SPAKRKGQNIQQSLLTWTEKYRPKTPNEIVGNQQLVKQLHAWLAHWNEKFLDTGTKRNGK 389

Query: 183 KQIDNGSKKAVLLSGSPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKILKGIGGST 362
           KQ D  ++KA LLSGSPG+GKTT+AKLV QMLGFQAIEVNASDSRGKAD+KI KGIGGS 
Sbjct: 390 KQNDASAEKAALLSGSPGMGKTTAAKLVCQMLGFQAIEVNASDSRGKADAKISKGIGGSN 449

Query: 363 ANSVKELVSNESLSVKMDWSKHPKSVLIMDEVDGMSAGDRGGVA 494
           ANS+KELVSNE+LS  MD SKHPK+VLIMDEVDGMSAGDRGG+A
Sbjct: 450 ANSIKELVSNEALSANMDRSKHPKTVLIMDEVDGMSAGDRGGIA 493


>gb|EYU22986.1| hypothetical protein MIMGU_mgv1a0010613mg, partial [Mimulus
           guttatus]
          Length = 733

 Score =  247 bits (631), Expect = 1e-63
 Identities = 128/165 (77%), Positives = 145/165 (87%), Gaps = 3/165 (1%)
 Frame = +3

Query: 9   TSPAKRRDQVDALT---WTEKYKPKVPNDIIGNQSLVKQLHDWLVHWNDNFLHTGPKGKG 179
           TSP KR++Q  A T   WTEKY+PKVPNDI+GNQSLVKQLHDWLV WN+ FL+TG K KG
Sbjct: 175 TSP-KRKNQPAAQTSLPWTEKYRPKVPNDIVGNQSLVKQLHDWLVSWNEQFLNTGKKEKG 233

Query: 180 KKQIDNGSKKAVLLSGSPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKILKGIGGS 359
           KKQ D+G KKAVLLSG+PGIGKTTSAKL+ QMLGFQAIEVNA DSRG+AD++I KGIGGS
Sbjct: 234 KKQSDSGPKKAVLLSGTPGIGKTTSAKLIRQMLGFQAIEVNAIDSRGQADAQIQKGIGGS 293

Query: 360 TANSVKELVSNESLSVKMDWSKHPKSVLIMDEVDGMSAGDRGGVA 494
           T+NSVKELVSNESLS KM+ ++  K+VLIMDEVDGMSAGDRGGVA
Sbjct: 294 TSNSVKELVSNESLSHKMERTQQQKTVLIMDEVDGMSAGDRGGVA 338


>ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana]
           gi|75168909|sp|Q9C587.1|RFC1_ARATH RecName:
           Full=Replication factor C subunit 1; Short=AtRFC1;
           AltName: Full=Activator 1 large subunit; AltName:
           Full=Activator 1 subunit 1 gi|13374860|emb|CAC34494.1|
           replication factor C large subunit-like protein
           [Arabidopsis thaliana] gi|48958527|gb|AAT47816.1|
           At5g22010 [Arabidopsis thaliana]
           gi|332005585|gb|AED92968.1| replication factor C1
           [Arabidopsis thaliana]
          Length = 956

 Score =  246 bits (629), Expect = 2e-63
 Identities = 123/162 (75%), Positives = 141/162 (87%), Gaps = 2/162 (1%)
 Frame = +3

Query: 15  PAKRRDQV--DALTWTEKYKPKVPNDIIGNQSLVKQLHDWLVHWNDNFLHTGPKGKGKKQ 188
           PAK ++++   +L WTEKY+PKVPN+I+GNQSLV QLH+WL HW+D F  TG KGKGKK 
Sbjct: 328 PAKGKNKIIETSLPWTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGKGKKL 387

Query: 189 IDNGSKKAVLLSGSPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKILKGIGGSTAN 368
            D GSKKAVLLSG+PGIGKTTSAKLVSQMLGFQA+EVNASDSRGKA+S I KGIGGS AN
Sbjct: 388 NDAGSKKAVLLSGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNAN 447

Query: 369 SVKELVSNESLSVKMDWSKHPKSVLIMDEVDGMSAGDRGGVA 494
           SVKELV+NE+++   D SKHPK+VLIMDEVDGMSAGDRGGVA
Sbjct: 448 SVKELVNNEAMAANFDRSKHPKTVLIMDEVDGMSAGDRGGVA 489


>ref|XP_007199003.1| hypothetical protein PRUPE_ppa000922mg [Prunus persica]
           gi|462394403|gb|EMJ00202.1| hypothetical protein
           PRUPE_ppa000922mg [Prunus persica]
          Length = 961

 Score =  246 bits (628), Expect = 2e-63
 Identities = 128/164 (78%), Positives = 141/164 (85%), Gaps = 3/164 (1%)
 Frame = +3

Query: 12  SPAKRRDQV---DALTWTEKYKPKVPNDIIGNQSLVKQLHDWLVHWNDNFLHTGPKGKGK 182
           S A+R+ Q     A TWTEKY+PKVPNDIIGNQSLVKQLHDWLVHW++ FL TG K KGK
Sbjct: 331 SHARRKKQPTEHSASTWTEKYRPKVPNDIIGNQSLVKQLHDWLVHWHEQFLDTGNKKKGK 390

Query: 183 KQIDNGSKKAVLLSGSPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKILKGIGGST 362
              ++ +KKAVLLSG+PGIGKTTSAKLVSQMLGFQ IEVNASDSRGKADSKI KGIGGS 
Sbjct: 391 NPTNSSAKKAVLLSGTPGIGKTTSAKLVSQMLGFQTIEVNASDSRGKADSKIEKGIGGSN 450

Query: 363 ANSVKELVSNESLSVKMDWSKHPKSVLIMDEVDGMSAGDRGGVA 494
           ANS+KELVSN++LS  MD  KHPK+VLIMDEVDGMSAGDRGGVA
Sbjct: 451 ANSIKELVSNKALS--MDGLKHPKTVLIMDEVDGMSAGDRGGVA 492


>ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
          Length = 942

 Score =  246 bits (628), Expect = 2e-63
 Identities = 121/150 (80%), Positives = 133/150 (88%)
 Frame = +3

Query: 45  LTWTEKYKPKVPNDIIGNQSLVKQLHDWLVHWNDNFLHTGPKGKGKKQIDNGSKKAVLLS 224
           LTWTEKY+PKVPNDIIGNQSLVKQLHDWL HWN+NFL  G K K KK  D+G+KKAVLL 
Sbjct: 324 LTWTEKYRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLC 383

Query: 225 GSPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKILKGIGGSTANSVKELVSNESLS 404
           G PGIGKTTSAKLVSQMLGF+AIEVNASD+RGK+D+KI KGIGGS ANS+KEL+SNESL 
Sbjct: 384 GGPGIGKTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLH 443

Query: 405 VKMDWSKHPKSVLIMDEVDGMSAGDRGGVA 494
            KM+  KH K+VLIMDEVDGMSAGDRGGVA
Sbjct: 444 FKMNQPKHHKTVLIMDEVDGMSAGDRGGVA 473


>ref|XP_006400706.1| hypothetical protein EUTSA_v10012587mg [Eutrema salsugineum]
           gi|557101796|gb|ESQ42159.1| hypothetical protein
           EUTSA_v10012587mg [Eutrema salsugineum]
          Length = 962

 Score =  245 bits (626), Expect = 4e-63
 Identities = 121/164 (73%), Positives = 143/164 (87%), Gaps = 2/164 (1%)
 Frame = +3

Query: 9   TSPAKRRDQV--DALTWTEKYKPKVPNDIIGNQSLVKQLHDWLVHWNDNFLHTGPKGKGK 182
           +SPAK + ++   +L WTEKY+PKVPN+I+GNQSLV QLH+WL HW+D F  TG KGKGK
Sbjct: 332 SSPAKAKKKIIQTSLPWTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGKGK 391

Query: 183 KQIDNGSKKAVLLSGSPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKILKGIGGST 362
           K  D G+KKAVL+SG+PGIGKTTSAKLVSQMLGFQA+EVNASDSRGKA+S I KGIGGS 
Sbjct: 392 KLNDAGAKKAVLMSGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSN 451

Query: 363 ANSVKELVSNESLSVKMDWSKHPKSVLIMDEVDGMSAGDRGGVA 494
           AN+VKELV+NE+++  +D SKHPK+VLIMDEVDGMSAGDRGGVA
Sbjct: 452 ANTVKELVNNEAIAANIDRSKHPKTVLIMDEVDGMSAGDRGGVA 495


>dbj|BAJ33988.1| unnamed protein product [Thellungiella halophila]
          Length = 933

 Score =  245 bits (626), Expect = 4e-63
 Identities = 121/164 (73%), Positives = 143/164 (87%), Gaps = 2/164 (1%)
 Frame = +3

Query: 9   TSPAKRRDQV--DALTWTEKYKPKVPNDIIGNQSLVKQLHDWLVHWNDNFLHTGPKGKGK 182
           +SPAK + ++   +L WTEKY+PKVPN+I+GNQSLV QLH+WL HW+D F  TG KGKGK
Sbjct: 303 SSPAKAKKKIIQTSLPWTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGKGK 362

Query: 183 KQIDNGSKKAVLLSGSPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKILKGIGGST 362
           K  D G+KKAVL+SG+PGIGKTTSAKLVSQMLGFQA+EVNASDSRGKA+S I KGIGGS 
Sbjct: 363 KLNDAGAKKAVLMSGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSN 422

Query: 363 ANSVKELVSNESLSVKMDWSKHPKSVLIMDEVDGMSAGDRGGVA 494
           AN+VKELV+NE+++  +D SKHPK+VLIMDEVDGMSAGDRGGVA
Sbjct: 423 ANTVKELVNNEAIAANIDRSKHPKTVLIMDEVDGMSAGDRGGVA 466


>ref|XP_004979519.1| PREDICTED: replication factor C subunit 1-like [Setaria italica]
          Length = 989

 Score =  244 bits (624), Expect = 7e-63
 Identities = 118/151 (78%), Positives = 135/151 (89%)
 Frame = +3

Query: 42  ALTWTEKYKPKVPNDIIGNQSLVKQLHDWLVHWNDNFLHTGPKGKGKKQIDNGSKKAVLL 221
           ++ WTEKY+PKVPNDI+GNQS+VKQLHDWL  W+  FLH+G KGKGKKQ DNG+KKAVLL
Sbjct: 372 SMQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWDTQFLHSGQKGKGKKQADNGAKKAVLL 431

Query: 222 SGSPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKILKGIGGSTANSVKELVSNESL 401
           SG PGIGKTT+AK+VSQMLG QAIEVNASDSRGKADSKI KG+GGST+NSVKEL+SN +L
Sbjct: 432 SGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSVKELISNATL 491

Query: 402 SVKMDWSKHPKSVLIMDEVDGMSAGDRGGVA 494
           +   +  KHPK+VLIMDEVDGMSAGDRGGVA
Sbjct: 492 NYSDNRLKHPKAVLIMDEVDGMSAGDRGGVA 522


>ref|XP_002874040.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319877|gb|EFH50299.1| AAA-type ATPase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 960

 Score =  244 bits (623), Expect = 9e-63
 Identities = 121/162 (74%), Positives = 141/162 (87%), Gaps = 2/162 (1%)
 Frame = +3

Query: 15  PAKRRDQV--DALTWTEKYKPKVPNDIIGNQSLVKQLHDWLVHWNDNFLHTGPKGKGKKQ 188
           PAK + ++   +L WTEKY+PKVPN+I+GNQSLV QLH+WL HW+D F  TG KGKGKK 
Sbjct: 332 PAKGKKKIIETSLPWTEKYRPKVPNEIVGNQSLVTQLHNWLSHWHDQFGGTGSKGKGKKL 391

Query: 189 IDNGSKKAVLLSGSPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKILKGIGGSTAN 368
            D G+KKAVLLSG+PGIGKTTSAKLVSQMLGFQA+EVNASDSRGKA+S I KGIGGS AN
Sbjct: 392 NDAGAKKAVLLSGTPGIGKTTSAKLVSQMLGFQAVEVNASDSRGKANSNIAKGIGGSNAN 451

Query: 369 SVKELVSNESLSVKMDWSKHPKSVLIMDEVDGMSAGDRGGVA 494
           +VKELV+NE+++  +D SKHPK+VLIMDEVDGMSAGDRGGVA
Sbjct: 452 TVKELVNNEAMAANLDRSKHPKTVLIMDEVDGMSAGDRGGVA 493


>ref|XP_006826419.1| hypothetical protein AMTR_s00004p00160120 [Amborella trichopoda]
           gi|548830733|gb|ERM93656.1| hypothetical protein
           AMTR_s00004p00160120 [Amborella trichopoda]
          Length = 725

 Score =  243 bits (620), Expect = 2e-62
 Identities = 117/152 (76%), Positives = 139/152 (91%)
 Frame = +3

Query: 39  DALTWTEKYKPKVPNDIIGNQSLVKQLHDWLVHWNDNFLHTGPKGKGKKQIDNGSKKAVL 218
           D+LTWTEKY+PKVPNDI+GNQSLVKQLHDWL+HW++  L+TG K KGK+Q D+ +KKAVL
Sbjct: 364 DSLTWTEKYRPKVPNDIVGNQSLVKQLHDWLLHWDEQNLYTGKKTKGKRQSDSNAKKAVL 423

Query: 219 LSGSPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKILKGIGGSTANSVKELVSNES 398
           LSG+PGIGKTT+AKL+S+M+G + IEVNASD+RGKADSKI+KGIGG+T+NS+KELVSNE+
Sbjct: 424 LSGTPGIGKTTAAKLLSKMVGRETIEVNASDNRGKADSKIVKGIGGNTSNSIKELVSNEA 483

Query: 399 LSVKMDWSKHPKSVLIMDEVDGMSAGDRGGVA 494
           L V  D SKH KSVLIMDEVDGMSAGDRGGVA
Sbjct: 484 LKVSGDQSKHLKSVLIMDEVDGMSAGDRGGVA 515


>ref|XP_006663537.1| PREDICTED: replication factor C subunit 1-like [Oryza brachyantha]
          Length = 1061

 Score =  243 bits (619), Expect = 3e-62
 Identities = 116/151 (76%), Positives = 135/151 (89%)
 Frame = +3

Query: 42  ALTWTEKYKPKVPNDIIGNQSLVKQLHDWLVHWNDNFLHTGPKGKGKKQIDNGSKKAVLL 221
           ++ WTEKY+PKVPNDI+GNQS+VKQLHDWL  W+D FLH+G KGKGKKQ D GSKKAVLL
Sbjct: 445 SMQWTEKYRPKVPNDIVGNQSMVKQLHDWLKGWDDQFLHSGQKGKGKKQSDGGSKKAVLL 504

Query: 222 SGSPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKILKGIGGSTANSVKELVSNESL 401
           SG PGIGKTT+AK+VSQMLG QAIEVNASDSRGKADSKI +G+GGST+NS+KEL+SN +L
Sbjct: 505 SGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIERGVGGSTSNSIKELISNVTL 564

Query: 402 SVKMDWSKHPKSVLIMDEVDGMSAGDRGGVA 494
           +   + SK PK+VL+MDEVDGMSAGDRGGVA
Sbjct: 565 NYSNNRSKQPKAVLVMDEVDGMSAGDRGGVA 595


>dbj|BAC76085.1| replication factor C 110 kDa subunit [Oryza sativa Japonica Group]
          Length = 1021

 Score =  242 bits (618), Expect = 3e-62
 Identities = 116/151 (76%), Positives = 134/151 (88%)
 Frame = +3

Query: 42  ALTWTEKYKPKVPNDIIGNQSLVKQLHDWLVHWNDNFLHTGPKGKGKKQIDNGSKKAVLL 221
           +L WTEKY+PKVPNDI+GNQS+VKQLHDWL  W D FLH+G KGKGKKQ D+G+KKAVLL
Sbjct: 405 SLQWTEKYRPKVPNDIVGNQSMVKQLHDWLKSWEDQFLHSGQKGKGKKQADSGAKKAVLL 464

Query: 222 SGSPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKILKGIGGSTANSVKELVSNESL 401
           SG PGIGKTT+AK+VSQMLG QAIEVNASDSRGKADSKI KG+GGST+NS+KEL+SN +L
Sbjct: 465 SGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKELISNATL 524

Query: 402 SVKMDWSKHPKSVLIMDEVDGMSAGDRGGVA 494
           +   +  K PK+VL+MDEVDGMSAGDRGGVA
Sbjct: 525 NYSNNRLKRPKAVLVMDEVDGMSAGDRGGVA 555


>gb|EEE52306.1| hypothetical protein OsJ_34316 [Oryza sativa Japonica Group]
          Length = 929

 Score =  242 bits (617), Expect = 4e-62
 Identities = 116/151 (76%), Positives = 134/151 (88%)
 Frame = +3

Query: 42  ALTWTEKYKPKVPNDIIGNQSLVKQLHDWLVHWNDNFLHTGPKGKGKKQIDNGSKKAVLL 221
           +L WTEKY+PKVPNDI+GNQS+VKQLHDWL  W D FLH+G KGKGKKQ D+G+KKAVLL
Sbjct: 396 SLQWTEKYRPKVPNDIVGNQSMVKQLHDWLRSWEDQFLHSGQKGKGKKQADSGAKKAVLL 455

Query: 222 SGSPGIGKTTSAKLVSQMLGFQAIEVNASDSRGKADSKILKGIGGSTANSVKELVSNESL 401
           SG PGIGKTT+AK+VSQMLG QAIEVNASDSRGKADSKI KG+GGST+NS+KEL+SN +L
Sbjct: 456 SGPPGIGKTTTAKVVSQMLGLQAIEVNASDSRGKADSKIEKGVGGSTSNSIKELISNATL 515

Query: 402 SVKMDWSKHPKSVLIMDEVDGMSAGDRGGVA 494
           +   +  K PK+VL+MDEVDGMSAGDRGGVA
Sbjct: 516 NYSNNRLKRPKAVLVMDEVDGMSAGDRGGVA 546