BLASTX nr result
ID: Cocculus22_contig00024130
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00024130
(328 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI37137.3| unnamed protein product [Vitis vinifera] 96 7e-18
ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-... 96 7e-18
ref|XP_007050253.1| DNA excision repair protein E [Theobroma cac... 93 3e-17
gb|EXB88373.1| DNA repair and recombination protein RAD26 [Morus... 92 1e-16
ref|XP_002529848.1| DNA repair and recombination protein RAD26, ... 91 2e-16
ref|XP_007199683.1| hypothetical protein PRUPE_ppa000387mg [Prun... 90 3e-16
ref|XP_004151991.1| PREDICTED: DNA repair protein rhp26-like [Cu... 87 3e-15
emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera] 83 5e-14
ref|XP_004289961.1| PREDICTED: DNA excision repair protein ERCC-... 82 6e-14
ref|XP_002307656.2| hypothetical protein POPTR_0005s24820g [Popu... 79 5e-13
ref|XP_006479511.1| PREDICTED: DNA repair and recombination prot... 79 7e-13
ref|XP_006479510.1| PREDICTED: DNA repair and recombination prot... 79 7e-13
ref|XP_006443810.1| hypothetical protein CICLE_v10018548mg [Citr... 79 7e-13
ref|XP_006443809.1| hypothetical protein CICLE_v10018548mg [Citr... 79 7e-13
gb|EYU17927.1| hypothetical protein MIMGU_mgv1a000355mg [Mimulus... 77 2e-12
ref|XP_007144880.1| hypothetical protein PHAVU_007G191600g [Phas... 75 1e-11
ref|XP_004247239.1| PREDICTED: DNA repair and recombination prot... 75 1e-11
ref|XP_006594029.1| PREDICTED: DNA repair and recombination prot... 75 1e-11
ref|XP_006409113.1| hypothetical protein EUTSA_v10022523mg [Eutr... 75 1e-11
ref|XP_006299332.1| hypothetical protein CARUB_v10015488mg [Caps... 72 6e-11
>emb|CBI37137.3| unnamed protein product [Vitis vinifera]
Length = 1116
Score = 95.5 bits (236), Expect = 7e-18
Identities = 48/103 (46%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
Frame = +3
Query: 3 EDRILLHTLGITSANPEDIERDLLREPANNTQGGNSDGGTVGEQLLEDPKCIDLPS-SRA 179
EDRILL +LG+TSANPED+ER++L N + G+ G + E+ L+ K +L S S+A
Sbjct: 5 EDRILLSSLGVTSANPEDVEREILAAATNEAENGSEAGRSTEEEFLDKSKATELSSTSQA 64
Query: 180 KLYNKLRAVEIEIDAVAASIEQASTVAENDDQASDTTANGSEG 308
KLY+KLRA+E+EIDAVA +++QA N++ S N ++G
Sbjct: 65 KLYSKLRALEVEIDAVAYTVQQARNTERNENHVSHGNDNRAQG 107
>ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
Length = 1227
Score = 95.5 bits (236), Expect = 7e-18
Identities = 48/103 (46%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
Frame = +3
Query: 3 EDRILLHTLGITSANPEDIERDLLREPANNTQGGNSDGGTVGEQLLEDPKCIDLPS-SRA 179
EDRILL +LG+TSANPED+ER++L N + G+ G + E+ L+ K +L S S+A
Sbjct: 5 EDRILLSSLGVTSANPEDVEREILAAATNEAENGSEAGRSTEEEFLDKSKATELSSTSQA 64
Query: 180 KLYNKLRAVEIEIDAVAASIEQASTVAENDDQASDTTANGSEG 308
KLY+KLRA+E+EIDAVA +++QA N++ S N ++G
Sbjct: 65 KLYSKLRALEVEIDAVAYTVQQARNTERNENHVSHGNDNRAQG 107
>ref|XP_007050253.1| DNA excision repair protein E [Theobroma cacao]
gi|508702514|gb|EOX94410.1| DNA excision repair protein
E [Theobroma cacao]
Length = 1228
Score = 93.2 bits (230), Expect = 3e-17
Identities = 52/111 (46%), Positives = 72/111 (64%), Gaps = 3/111 (2%)
Frame = +3
Query: 3 EDRILLHTLGITSANPEDIERDLLREPANNTQGGNSDGGTVGEQLLEDPKCIDLPSS--- 173
EDRILL +LG+TSANPEDIERD+L + NN G+ GG+ E+ + D PSS
Sbjct: 5 EDRILLSSLGVTSANPEDIERDILAKAENNAGDGSEVGGSTEEEPTGKSESND-PSSLAN 63
Query: 174 RAKLYNKLRAVEIEIDAVAASIEQASTVAENDDQASDTTANGSEGRKDVND 326
+AKL NKLRA+E EIDAVA+++E+ + V DD+A + S + ++ D
Sbjct: 64 QAKLLNKLRAIEFEIDAVASTVEEGTNVVSGDDRADHDADDDSTEKGNIED 114
>gb|EXB88373.1| DNA repair and recombination protein RAD26 [Morus notabilis]
Length = 1218
Score = 91.7 bits (226), Expect = 1e-16
Identities = 50/107 (46%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
Frame = +3
Query: 3 EDRILLHTLGITSANPEDIERDLLREPANNTQGGNSDGGTVGEQLLEDPKCIDLPS--SR 176
EDRILL +LG+TSANPEDIER++L + +N G + G + E LE + +D PS S+
Sbjct: 5 EDRILLRSLGVTSANPEDIERNILSQATSNV-GSSEVGEDIEENALEQSETVD-PSTASQ 62
Query: 177 AKLYNKLRAVEIEIDAVAASIEQASTVAENDDQASDTTANGSEGRKD 317
A+LYNKLRAVE EIDAVA++++ + +N+D A D + +G ++
Sbjct: 63 ARLYNKLRAVEFEIDAVASTVKPERKILQNEDNAYDGDGSTEQGAEE 109
>ref|XP_002529848.1| DNA repair and recombination protein RAD26, putative [Ricinus
communis] gi|223530676|gb|EEF32549.1| DNA repair and
recombination protein RAD26, putative [Ricinus communis]
Length = 1230
Score = 90.5 bits (223), Expect = 2e-16
Identities = 49/95 (51%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Frame = +3
Query: 3 EDRILLHTLGITSANPEDIERDLLREPANNTQGGNSDGGTVGEQLLEDPKCIDLPS-SRA 179
ED+ LL TLG+TS NPEDIERD+L E NNT+ G + E+ + +L S S A
Sbjct: 5 EDKFLLSTLGVTSVNPEDIERDILAEVRNNTENDGEAGVSTEEEPPDKSISTNLASASEA 64
Query: 180 KLYNKLRAVEIEIDAVAASIEQASTVAENDDQASD 284
KLYNKLRAV+ EIDAVA+++EQ V +D A D
Sbjct: 65 KLYNKLRAVKFEIDAVASTVEQVKNVVNGEDHAYD 99
>ref|XP_007199683.1| hypothetical protein PRUPE_ppa000387mg [Prunus persica]
gi|462395083|gb|EMJ00882.1| hypothetical protein
PRUPE_ppa000387mg [Prunus persica]
Length = 1218
Score = 90.1 bits (222), Expect = 3e-16
Identities = 57/104 (54%), Positives = 71/104 (68%), Gaps = 3/104 (2%)
Frame = +3
Query: 3 EDRILLHTLGITSANPEDIERDLLREPANNTQGGNSD--GGTVGEQLLEDPKCID-LPSS 173
EDRILL +LG+TSANPEDIERD+L NN GN+ GG+ E+ LE + ID L +S
Sbjct: 5 EDRILLDSLGVTSANPEDIERDILSGAQNN---GNASEVGGSTEEEPLERSESIDPLAAS 61
Query: 174 RAKLYNKLRAVEIEIDAVAASIEQASTVAENDDQASDTTANGSE 305
+AKLYNKLRAVE EIDAVA+++E A N+ A D +G E
Sbjct: 62 QAKLYNKLRAVEFEIDAVASTVEPEQ--AGNEGAACDGDDDGVE 103
>ref|XP_004151991.1| PREDICTED: DNA repair protein rhp26-like [Cucumis sativus]
gi|449522123|ref|XP_004168077.1| PREDICTED: DNA repair
protein rhp26-like [Cucumis sativus]
Length = 1221
Score = 86.7 bits (213), Expect = 3e-15
Identities = 47/106 (44%), Positives = 65/106 (61%), Gaps = 1/106 (0%)
Frame = +3
Query: 3 EDRILLHTLGITSANPEDIERDLLREPANNTQGGNSDGGTVGEQLLEDPKCIDLPS-SRA 179
EDRI L++LG+TSANPEDIERDLL E ++ G GG E + + D PS S
Sbjct: 5 EDRIFLNSLGVTSANPEDIERDLLNEAKKKSENGVEVGGIEEENVCDKLDTTDSPSASHV 64
Query: 180 KLYNKLRAVEIEIDAVAASIEQASTVAENDDQASDTTANGSEGRKD 317
+LY KLRAVE EIDAVA+++E + N+ + +T + R++
Sbjct: 65 QLYQKLRAVEYEIDAVASTVEPGEKLERNEQHSCVSTDSQKHAREE 110
>emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]
Length = 1249
Score = 82.8 bits (203), Expect = 5e-14
Identities = 48/125 (38%), Positives = 70/125 (56%), Gaps = 23/125 (18%)
Frame = +3
Query: 3 EDRILLHTLGITSANPEDIERDLLR----------------------EPANNTQGGNSDG 116
EDRILL +LG+TSANPED+ER++L E N + G+ G
Sbjct: 5 EDRILLSSLGVTSANPEDVEREILAAYIDHIVPLGCRSVRVSFSNEPEATNEAENGSEAG 64
Query: 117 GTVGEQLLEDPKCIDLPS-SRAKLYNKLRAVEIEIDAVAASIEQASTVAENDDQASDTTA 293
+ E+ L+ K +L S S+AKLY+KL A+E+EIDAVA +++QA N++ S
Sbjct: 65 RSTEEEFLDKSKATELSSTSQAKLYSKLXALEVEIDAVAYTVQQARNTERNENHVSHGND 124
Query: 294 NGSEG 308
N ++G
Sbjct: 125 NRAQG 129
>ref|XP_004289961.1| PREDICTED: DNA excision repair protein ERCC-6-like [Fragaria vesca
subsp. vesca]
Length = 1208
Score = 82.4 bits (202), Expect = 6e-14
Identities = 50/91 (54%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Frame = +3
Query: 3 EDRILLHTLGITSANPEDIERDLLREPANNTQGGNSDGGTVGEQLLEDPKCIDLPSSRAK 182
EDRILL +LG+TSANPEDIERD+L E NN G E+ E P+ ID PS+
Sbjct: 5 EDRILLSSLGVTSANPEDIERDILSEAKNNGNAGGIGEVEEEEEEGEKPESID-PST--A 61
Query: 183 LYNKLRAVEIEIDAVAASIE-QASTVAENDD 272
LYNKLRAVE EIDAVA+++E + V + DD
Sbjct: 62 LYNKLRAVEFEIDAVASTVEHEQGGVGDGDD 92
>ref|XP_002307656.2| hypothetical protein POPTR_0005s24820g [Populus trichocarpa]
gi|550339682|gb|EEE94652.2| hypothetical protein
POPTR_0005s24820g [Populus trichocarpa]
Length = 1206
Score = 79.3 bits (194), Expect = 5e-13
Identities = 49/110 (44%), Positives = 69/110 (62%), Gaps = 2/110 (1%)
Frame = +3
Query: 3 EDRILLHTLGITSANPEDIERDLLREPANNTQGGNSDGGTVGEQLLEDPKCIDLPSS--R 176
ED +LL +LG+TSANPEDIER +L E NN GG+ E+ + + +D PSS +
Sbjct: 5 EDSVLLSSLGVTSANPEDIERVVLEEARNNA----DKGGSTEEEPPDKLENVD-PSSANQ 59
Query: 177 AKLYNKLRAVEIEIDAVAASIEQASTVAENDDQASDTTANGSEGRKDVND 326
AKLY+KLRAV+ EIDAVA+++E+ + V + Q D G ++D D
Sbjct: 60 AKLYSKLRAVKFEIDAVASTVEEVTDVVSGEHQTYDD--GGGTKKRDKGD 107
>ref|XP_006479511.1| PREDICTED: DNA repair and recombination protein RAD26-like isoform
X3 [Citrus sinensis]
Length = 1075
Score = 79.0 bits (193), Expect = 7e-13
Identities = 50/109 (45%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Frame = +3
Query: 3 EDRILLHTLGITSANPEDIERDLLREPANNTQGGNSDGGTVGEQLLEDPKCIDLPS-SRA 179
EDR+LL +LG+TSANPEDIERD+L N N + E+ + + ID S S+
Sbjct: 5 EDRLLLSSLGVTSANPEDIERDVLAAAENVAGNSNETEESNEEKPHDKSESIDPSSTSQE 64
Query: 180 KLYNKLRAVEIEIDAVAASIE---QASTVAENDDQASDTTANGSEGRKD 317
KLYNKLRAVE EI AVA++++ + ST +ND D+T +GR+D
Sbjct: 65 KLYNKLRAVEFEIGAVASTVDHLRRVSTKEDNDIDDGDSTE--QDGRED 111
>ref|XP_006479510.1| PREDICTED: DNA repair and recombination protein RAD26-like isoform
X2 [Citrus sinensis]
Length = 1231
Score = 79.0 bits (193), Expect = 7e-13
Identities = 50/109 (45%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Frame = +3
Query: 3 EDRILLHTLGITSANPEDIERDLLREPANNTQGGNSDGGTVGEQLLEDPKCIDLPS-SRA 179
EDR+LL +LG+TSANPEDIERD+L N N + E+ + + ID S S+
Sbjct: 5 EDRLLLSSLGVTSANPEDIERDVLAAAENVAGNSNETEESNEEKPHDKSESIDPSSTSQE 64
Query: 180 KLYNKLRAVEIEIDAVAASIE---QASTVAENDDQASDTTANGSEGRKD 317
KLYNKLRAVE EI AVA++++ + ST +ND D+T +GR+D
Sbjct: 65 KLYNKLRAVEFEIGAVASTVDHLRRVSTKEDNDIDDGDSTE--QDGRED 111
>ref|XP_006443810.1| hypothetical protein CICLE_v10018548mg [Citrus clementina]
gi|567902646|ref|XP_006443811.1| hypothetical protein
CICLE_v10018548mg [Citrus clementina]
gi|568851669|ref|XP_006479509.1| PREDICTED: DNA repair
and recombination protein RAD26-like isoform X1 [Citrus
sinensis] gi|557546072|gb|ESR57050.1| hypothetical
protein CICLE_v10018548mg [Citrus clementina]
gi|557546073|gb|ESR57051.1| hypothetical protein
CICLE_v10018548mg [Citrus clementina]
Length = 1232
Score = 79.0 bits (193), Expect = 7e-13
Identities = 50/109 (45%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Frame = +3
Query: 3 EDRILLHTLGITSANPEDIERDLLREPANNTQGGNSDGGTVGEQLLEDPKCIDLPS-SRA 179
EDR+LL +LG+TSANPEDIERD+L N N + E+ + + ID S S+
Sbjct: 5 EDRLLLSSLGVTSANPEDIERDVLAAAENVAGNSNETEESNEEKPHDKSESIDPSSTSQE 64
Query: 180 KLYNKLRAVEIEIDAVAASIE---QASTVAENDDQASDTTANGSEGRKD 317
KLYNKLRAVE EI AVA++++ + ST +ND D+T +GR+D
Sbjct: 65 KLYNKLRAVEFEIGAVASTVDHLRRVSTKEDNDIDDGDSTE--QDGRED 111
>ref|XP_006443809.1| hypothetical protein CICLE_v10018548mg [Citrus clementina]
gi|557546071|gb|ESR57049.1| hypothetical protein
CICLE_v10018548mg [Citrus clementina]
Length = 1049
Score = 79.0 bits (193), Expect = 7e-13
Identities = 50/109 (45%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Frame = +3
Query: 3 EDRILLHTLGITSANPEDIERDLLREPANNTQGGNSDGGTVGEQLLEDPKCIDLPS-SRA 179
EDR+LL +LG+TSANPEDIERD+L N N + E+ + + ID S S+
Sbjct: 5 EDRLLLSSLGVTSANPEDIERDVLAAAENVAGNSNETEESNEEKPHDKSESIDPSSTSQE 64
Query: 180 KLYNKLRAVEIEIDAVAASIE---QASTVAENDDQASDTTANGSEGRKD 317
KLYNKLRAVE EI AVA++++ + ST +ND D+T +GR+D
Sbjct: 65 KLYNKLRAVEFEIGAVASTVDHLRRVSTKEDNDIDDGDSTE--QDGRED 111
>gb|EYU17927.1| hypothetical protein MIMGU_mgv1a000355mg [Mimulus guttatus]
Length = 1221
Score = 77.4 bits (189), Expect = 2e-12
Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Frame = +3
Query: 3 EDRILLHTLGITSANPEDIERDLLREPANNTQGGNSDGGTVGEQLLEDPKCIDLPSS--R 176
EDR+LL LG+TSANPEDIERD+L + N N D G E+ L+ K + SS +
Sbjct: 6 EDRVLLSALGVTSANPEDIERDILEKARKNAGDNNKDAGGREEETLDRTKNNETSSSNGK 65
Query: 177 AKLYNKLRAVEIEIDAVAASIEQ 245
A L +KLRAV++EIDAV +++EQ
Sbjct: 66 ADLVSKLRAVKLEIDAVKSAVEQ 88
>ref|XP_007144880.1| hypothetical protein PHAVU_007G191600g [Phaseolus vulgaris]
gi|561018070|gb|ESW16874.1| hypothetical protein
PHAVU_007G191600g [Phaseolus vulgaris]
Length = 1221
Score = 75.1 bits (183), Expect = 1e-11
Identities = 44/101 (43%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Frame = +3
Query: 3 EDRILLHTLGITSANPEDIERDLLREPANNTQGGNSDG-GTVGEQLLEDPKCID-LPSSR 176
EDRILL +LG+ SANPEDIERD+L + N ++G G+ E+ + + +D ++R
Sbjct: 5 EDRILLSSLGVKSANPEDIERDVLEKATKNDSVTVTEGEGSAKEERSDLTENVDPSANAR 64
Query: 177 AKLYNKLRAVEIEIDAVAASIEQASTVAENDDQASDTTANG 299
A+L+ KLRAV+ EIDAVA+++E+ V EN+++ D +G
Sbjct: 65 AELHQKLRAVQFEIDAVASTVERLRNV-ENNEECCDAGEDG 104
>ref|XP_004247239.1| PREDICTED: DNA repair and recombination protein RAD26-like [Solanum
lycopersicum]
Length = 1213
Score = 75.1 bits (183), Expect = 1e-11
Identities = 41/96 (42%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Frame = +3
Query: 3 EDRILLHTLGITSANPEDIERDLLREPANNTQGGNSDGGTVGEQLLE-DPKCIDLPSSRA 179
ED+ILL +LG+TSANPEDIERD+L + + GN G E++ E + + +
Sbjct: 6 EDKILLSSLGVTSANPEDIERDVLDQATRHVGEGNEATGIAEEEIEERKEEKEEGHDKKL 65
Query: 180 KLYNKLRAVEIEIDAVAASIEQASTVAENDDQASDT 287
L+NKLRAVE+EIDA+ E N+++ SDT
Sbjct: 66 DLFNKLRAVEVEIDAIKDGFEHLERFRRNEEEFSDT 101
>ref|XP_006594029.1| PREDICTED: DNA repair and recombination protein RAD26-like [Glycine
max]
Length = 1225
Score = 74.7 bits (182), Expect = 1e-11
Identities = 49/115 (42%), Positives = 75/115 (65%), Gaps = 8/115 (6%)
Frame = +3
Query: 3 EDRILLHTLGITSANPEDIERDLLREPANNTQGGNSD-GGTVGEQLLEDPKCIDLPSS-- 173
EDRILL +LG+ SANPEDIERD+L + N ++ G+ E+ + P+ +D PS+
Sbjct: 5 EDRILLSSLGVKSANPEDIERDVLEKATRNDLVTVTEVEGSAKEERSDLPENVD-PSAND 63
Query: 174 RAKLYNKLRAVEIEIDAVAASIEQASTVAENDDQASDTTANG-----SEGRKDVN 323
+A++ KLRAV+ EIDAVA+++E+ S V E++++ SD +G +EG D N
Sbjct: 64 KAEIRQKLRAVQFEIDAVASAVERLSNV-EDNEECSDAGEDGPGRGTAEGESDGN 117
>ref|XP_006409113.1| hypothetical protein EUTSA_v10022523mg [Eutrema salsugineum]
gi|557110275|gb|ESQ50566.1| hypothetical protein
EUTSA_v10022523mg [Eutrema salsugineum]
Length = 1179
Score = 74.7 bits (182), Expect = 1e-11
Identities = 46/95 (48%), Positives = 60/95 (63%), Gaps = 1/95 (1%)
Frame = +3
Query: 3 EDRILLHTLGITSANPEDIERDLLREPANNTQGGNSDGGTVGEQLLEDPKCIDLPSSRAK 182
EDR LL +LG+TSANP DIE+ +L E Q +++G +V EQ +E LPSS +
Sbjct: 5 EDRFLLSSLGVTSANPADIEQTILDEATK--QLDDNEGASVEEQSIEPEGSRLLPSSHNE 62
Query: 183 LYNKLRAVEIEIDAVAASIEQA-STVAENDDQASD 284
L NKLRAV+ EIDAVA+++E AEN Q D
Sbjct: 63 LLNKLRAVKFEIDAVASTVEHVEEDAAENGLQKDD 97
>ref|XP_006299332.1| hypothetical protein CARUB_v10015488mg [Capsella rubella]
gi|482568041|gb|EOA32230.1| hypothetical protein
CARUB_v10015488mg [Capsella rubella]
Length = 1182
Score = 72.4 bits (176), Expect = 6e-11
Identities = 40/94 (42%), Positives = 59/94 (62%)
Frame = +3
Query: 3 EDRILLHTLGITSANPEDIERDLLREPANNTQGGNSDGGTVGEQLLEDPKCIDLPSSRAK 182
E ++LL +LG+TSANPED+E+ +L E + +GG+V EQ + LPSS+++
Sbjct: 5 EHQLLLSSLGVTSANPEDLEQTILDEATKKPD--HDEGGSVEEQ------SVQLPSSQSE 56
Query: 183 LYNKLRAVEIEIDAVAASIEQASTVAENDDQASD 284
L NKLRAV+ EIDAVA+++ +A D D
Sbjct: 57 LLNKLRAVKFEIDAVASTVGHVDEIAAEDGLQKD 90