BLASTX nr result
ID: Cocculus22_contig00024097
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00024097
(301 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006850782.1| hypothetical protein AMTR_s00025p00095750 [A... 108 8e-22
ref|XP_006584061.1| PREDICTED: multiple RNA-binding domain-conta... 102 7e-20
ref|XP_004508368.1| PREDICTED: glycine-rich RNA-binding protein ... 100 4e-19
emb|CBI26179.3| unnamed protein product [Vitis vinifera] 100 4e-19
ref|XP_003550050.1| PREDICTED: multiple RNA-binding domain-conta... 99 5e-19
ref|XP_007154133.1| hypothetical protein PHAVU_003G093200g [Phas... 98 1e-18
ref|XP_004241058.1| PREDICTED: RNA-binding motif protein, Y chro... 98 1e-18
ref|XP_006356681.1| PREDICTED: RNA-binding motif protein, Y chro... 95 1e-17
gb|EYU43838.1| hypothetical protein MIMGU_mgv1a014975mg [Mimulus... 94 2e-17
ref|XP_006419805.1| hypothetical protein CICLE_v10006073mg [Citr... 89 6e-16
ref|XP_002873925.1| predicted protein [Arabidopsis lyrata subsp.... 87 3e-15
ref|XP_007034591.1| CBS domain-containing protein with a domain ... 86 5e-15
ref|NP_197404.2| RNA recognition motif-containing protein [Arabi... 86 5e-15
ref|XP_006400458.1| hypothetical protein EUTSA_v10014796mg [Eutr... 84 2e-14
ref|XP_006286393.1| hypothetical protein CARUB_v10002089mg [Caps... 84 3e-14
ref|XP_002280240.1| PREDICTED: 40S ribosomal protein S19, mitoch... 81 1e-13
ref|XP_006356682.1| PREDICTED: RNA-binding motif protein, Y chro... 79 5e-13
ref|XP_006600317.1| PREDICTED: multiple RNA-binding domain-conta... 77 3e-12
ref|XP_006489292.1| PREDICTED: polyadenylate-binding protein RBP... 75 1e-11
gb|ABK22008.1| unknown [Picea sitchensis] 74 3e-11
>ref|XP_006850782.1| hypothetical protein AMTR_s00025p00095750 [Amborella trichopoda]
gi|548854453|gb|ERN12363.1| hypothetical protein
AMTR_s00025p00095750 [Amborella trichopoda]
Length = 121
Score = 108 bits (270), Expect = 8e-22
Identities = 50/81 (61%), Positives = 66/81 (81%)
Frame = -1
Query: 262 TRIFIKGLSQATTEGVLAKAFSHFGKVNKVKIVRERRSGESLGFAYVWFDWEESAEMATK 83
TR+FIKGLS +TTEG L AFS FGKV++VK+V +R S +SLGFAY+WF EE A++A K
Sbjct: 29 TRVFIKGLSLSTTEGYLTNAFSQFGKVDRVKVVTDRASKQSLGFAYIWFTCEEDAKLAVK 88
Query: 82 EMNGRFFGGRFIAVTIARPES 20
+M+G+FF GRF+ VT+A PE+
Sbjct: 89 KMDGKFFDGRFVHVTMAWPET 109
>ref|XP_006584061.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Glycine max]
Length = 157
Score = 102 bits (253), Expect = 7e-20
Identities = 50/86 (58%), Positives = 64/86 (74%)
Frame = -1
Query: 259 RIFIKGLSQATTEGVLAKAFSHFGKVNKVKIVRERRSGESLGFAYVWFDWEESAEMATKE 80
+IF+KGL +T+EG L K FS FG V V++ +R SG+SLGFAY+WF EESA++A +E
Sbjct: 66 KIFVKGLPLSTSEGRLMKVFSEFGDVTLVQLPIDRESGQSLGFAYIWFVKEESAQLAVQE 125
Query: 79 MNGRFFGGRFIAVTIARPESHTSQVR 2
MNG+FF GRFI VTIA+P S S R
Sbjct: 126 MNGKFFDGRFIYVTIAKPGSSKSSKR 151
>ref|XP_004508368.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
[Cicer arietinum]
Length = 162
Score = 99.8 bits (247), Expect = 4e-19
Identities = 51/87 (58%), Positives = 66/87 (75%)
Frame = -1
Query: 262 TRIFIKGLSQATTEGVLAKAFSHFGKVNKVKIVRERRSGESLGFAYVWFDWEESAEMATK 83
T+IFIKGL + +E L K FS FG+V +VKI+ ++ SG+SLGFAY+ FD EESA++A K
Sbjct: 70 TKIFIKGLPLSISEVRLTKVFSGFGEVTQVKILIDKESGQSLGFAYISFDKEESAQLAAK 129
Query: 82 EMNGRFFGGRFIAVTIARPESHTSQVR 2
EMNG+FF GRFI V+IA+P S S R
Sbjct: 130 EMNGKFFDGRFIYVSIAKPGSSKSWKR 156
>emb|CBI26179.3| unnamed protein product [Vitis vinifera]
Length = 156
Score = 99.8 bits (247), Expect = 4e-19
Identities = 48/79 (60%), Positives = 61/79 (77%)
Frame = -1
Query: 262 TRIFIKGLSQATTEGVLAKAFSHFGKVNKVKIVRERRSGESLGFAYVWFDWEESAEMATK 83
TRIFIKGL Q+T EG L KAFS FG+V+KV+I R + S + LGFA+ WF EESA++A K
Sbjct: 64 TRIFIKGLPQSTCEGSLKKAFSQFGEVSKVRIKRNKISSQPLGFAFAWFTTEESAQLAVK 123
Query: 82 EMNGRFFGGRFIAVTIARP 26
M+G+FF GRF+ V IA+P
Sbjct: 124 MMDGKFFHGRFVFVKIAKP 142
>ref|XP_003550050.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform X1 [Glycine max]
Length = 160
Score = 99.4 bits (246), Expect = 5e-19
Identities = 48/86 (55%), Positives = 64/86 (74%)
Frame = -1
Query: 259 RIFIKGLSQATTEGVLAKAFSHFGKVNKVKIVRERRSGESLGFAYVWFDWEESAEMATKE 80
+IF+KGL +T+EG L K FS FG+V +++ ++ SG+SLGFAY+WF EESA++A E
Sbjct: 69 KIFVKGLPLSTSEGHLMKVFSEFGEVTLIQLPIDKESGQSLGFAYIWFVKEESAQLAVLE 128
Query: 79 MNGRFFGGRFIAVTIARPESHTSQVR 2
MNG+FF GRFI VTIA+P S S R
Sbjct: 129 MNGKFFYGRFIYVTIAKPGSSKSSKR 154
>ref|XP_007154133.1| hypothetical protein PHAVU_003G093200g [Phaseolus vulgaris]
gi|561027487|gb|ESW26127.1| hypothetical protein
PHAVU_003G093200g [Phaseolus vulgaris]
Length = 161
Score = 98.2 bits (243), Expect = 1e-18
Identities = 46/80 (57%), Positives = 62/80 (77%)
Frame = -1
Query: 259 RIFIKGLSQATTEGVLAKAFSHFGKVNKVKIVRERRSGESLGFAYVWFDWEESAEMATKE 80
+IF+KGL + +EG L K FS FG+VN V++ + SG+SLGFA++WF EESA++A +E
Sbjct: 70 KIFVKGLPHSASEGRLMKVFSEFGEVNLVQLPIDEESGQSLGFAFIWFVKEESAQLAIQE 129
Query: 79 MNGRFFGGRFIAVTIARPES 20
MNG+FF GRFI VTIA+P S
Sbjct: 130 MNGKFFDGRFIYVTIAKPGS 149
>ref|XP_004241058.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
B-like [Solanum lycopersicum]
Length = 168
Score = 97.8 bits (242), Expect = 1e-18
Identities = 48/87 (55%), Positives = 63/87 (72%)
Frame = -1
Query: 262 TRIFIKGLSQATTEGVLAKAFSHFGKVNKVKIVRERRSGESLGFAYVWFDWEESAEMATK 83
T IF+KGL+++T EG L FS FG VN+VKIV +++S ESLGFAY+WF ESA+ A +
Sbjct: 76 TIIFLKGLAKSTPEGRLKVVFSQFGNVNRVKIVTDKKSKESLGFAYIWFPDNESAQSAIR 135
Query: 82 EMNGRFFGGRFIAVTIARPESHTSQVR 2
EMNG+F GRFI V +A+P S V+
Sbjct: 136 EMNGKFLDGRFIQVQMAKPGSCKPNVK 162
>ref|XP_006356681.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
B-like isoform X1 [Solanum tuberosum]
Length = 168
Score = 94.7 bits (234), Expect = 1e-17
Identities = 45/81 (55%), Positives = 61/81 (75%)
Frame = -1
Query: 262 TRIFIKGLSQATTEGVLAKAFSHFGKVNKVKIVRERRSGESLGFAYVWFDWEESAEMATK 83
T IF+KGL+++T EG L FS FG V++VKI+ +++S ESLGFAY+WF ESA+ A +
Sbjct: 76 TIIFLKGLAKSTPEGRLKVVFSQFGDVSRVKIITDKKSKESLGFAYIWFPDNESAQAAVQ 135
Query: 82 EMNGRFFGGRFIAVTIARPES 20
EMNG+F GRFI V +A+P S
Sbjct: 136 EMNGKFLDGRFIQVQMAKPGS 156
>gb|EYU43838.1| hypothetical protein MIMGU_mgv1a014975mg [Mimulus guttatus]
Length = 172
Score = 94.0 bits (232), Expect = 2e-17
Identities = 45/79 (56%), Positives = 59/79 (74%)
Frame = -1
Query: 256 IFIKGLSQATTEGVLAKAFSHFGKVNKVKIVRERRSGESLGFAYVWFDWEESAEMATKEM 77
IFIKGL+Q+T+EG L FS FG+V++VKIV ++++ + LGFAYVWF E+ A+ A EM
Sbjct: 82 IFIKGLAQSTSEGGLKSEFSRFGEVSRVKIVSDKKTKQPLGFAYVWFAREDHAQAAVDEM 141
Query: 76 NGRFFGGRFIAVTIARPES 20
NG FF GRFI V A+P S
Sbjct: 142 NGHFFEGRFIRVAFAKPGS 160
>ref|XP_006419805.1| hypothetical protein CICLE_v10006073mg [Citrus clementina]
gi|568872263|ref|XP_006489291.1| PREDICTED:
polyadenylate-binding protein RBP47C'-like isoform X1
[Citrus sinensis] gi|557521678|gb|ESR33045.1|
hypothetical protein CICLE_v10006073mg [Citrus
clementina]
Length = 167
Score = 89.0 bits (219), Expect = 6e-16
Identities = 45/77 (58%), Positives = 58/77 (75%)
Frame = -1
Query: 262 TRIFIKGLSQATTEGVLAKAFSHFGKVNKVKIVRERRSGESLGFAYVWFDWEESAEMATK 83
T IFIKGL ++ TEG + KAFS FG+V +VKIV E+ S + LG A+VWF +ESA++A +
Sbjct: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
Query: 82 EMNGRFFGGRFIAVTIA 32
MNG+FF GRFI V IA
Sbjct: 135 NMNGKFFYGRFILVKIA 151
>ref|XP_002873925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319762|gb|EFH50184.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 167
Score = 86.7 bits (213), Expect = 3e-15
Identities = 38/77 (49%), Positives = 54/77 (70%)
Frame = -1
Query: 256 IFIKGLSQATTEGVLAKAFSHFGKVNKVKIVRERRSGESLGFAYVWFDWEESAEMATKEM 77
+F+KG S + +EG L K FS FG+V VKI+ R+ +SLG+ YVWF+ +E A++A + M
Sbjct: 77 VFVKGFSDSVSEGRLKKVFSEFGQVTNVKIIINERTRQSLGYGYVWFNRKEDAQLAVEAM 136
Query: 76 NGRFFGGRFIAVTIARP 26
NG+FF GRFI V +P
Sbjct: 137 NGKFFDGRFILVKFGQP 153
>ref|XP_007034591.1| CBS domain-containing protein with a domain of Uncharacterized
protein function isoform 1 [Theobroma cacao]
gi|508713620|gb|EOY05517.1| CBS domain-containing
protein with a domain of Uncharacterized protein
function isoform 1 [Theobroma cacao]
Length = 628
Score = 85.9 bits (211), Expect = 5e-15
Identities = 42/69 (60%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Frame = -1
Query: 256 IFIKGLSQATTEGVLAKAFSHFGKVNK-VKIVRERRSGESLGFAYVWFDWEESAEMATKE 80
+FIKGL Q+T EG L + FS FG+V + V +VRER S +SLG A+VWFD E+SA++A KE
Sbjct: 69 VFIKGLPQSTAEGRLKRVFSQFGEVKQAVNVVRERVSKQSLGSAFVWFDEEQSAQLAVKE 128
Query: 79 MNGRFFGGR 53
MNG+FF GR
Sbjct: 129 MNGKFFDGR 137
>ref|NP_197404.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332005259|gb|AED92642.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 172
Score = 85.9 bits (211), Expect = 5e-15
Identities = 38/77 (49%), Positives = 53/77 (68%)
Frame = -1
Query: 256 IFIKGLSQATTEGVLAKAFSHFGKVNKVKIVRERRSGESLGFAYVWFDWEESAEMATKEM 77
+F+KG S + +EG L K FS FG+V VKI+ R+ +SLG+ YVWF+ +E A+ A + M
Sbjct: 79 LFVKGFSDSVSEGRLKKVFSEFGQVTNVKIIANERTRQSLGYGYVWFNSKEDAQSAVEAM 138
Query: 76 NGRFFGGRFIAVTIARP 26
NG+FF GRFI V +P
Sbjct: 139 NGKFFDGRFILVKFGQP 155
>ref|XP_006400458.1| hypothetical protein EUTSA_v10014796mg [Eutrema salsugineum]
gi|557101548|gb|ESQ41911.1| hypothetical protein
EUTSA_v10014796mg [Eutrema salsugineum]
Length = 181
Score = 84.3 bits (207), Expect = 2e-14
Identities = 36/77 (46%), Positives = 55/77 (71%)
Frame = -1
Query: 256 IFIKGLSQATTEGVLAKAFSHFGKVNKVKIVRERRSGESLGFAYVWFDWEESAEMATKEM 77
+F+KGL + +EG L K FS +G+V+ VKI+ ++ +SLG+ YVWF+ +E A++A + M
Sbjct: 88 VFVKGLPDSVSEGRLRKVFSEYGEVSNVKIIVNEKTRQSLGYGYVWFNKKEDAQLAVEAM 147
Query: 76 NGRFFGGRFIAVTIARP 26
NG+FF GRFI V +P
Sbjct: 148 NGKFFDGRFILVKFGQP 164
>ref|XP_006286393.1| hypothetical protein CARUB_v10002089mg [Capsella rubella]
gi|482555099|gb|EOA19291.1| hypothetical protein
CARUB_v10002089mg [Capsella rubella]
Length = 177
Score = 83.6 bits (205), Expect = 3e-14
Identities = 37/79 (46%), Positives = 55/79 (69%)
Frame = -1
Query: 262 TRIFIKGLSQATTEGVLAKAFSHFGKVNKVKIVRERRSGESLGFAYVWFDWEESAEMATK 83
T IF+KG+ + +EG L FS FG+V+ VKI+ ++ +SLG+ YVWF+ +E A++A +
Sbjct: 81 TSIFVKGIPDSVSEGRLKIVFSEFGQVSNVKIIINEKTQQSLGYGYVWFNSKEDAQLAVE 140
Query: 82 EMNGRFFGGRFIAVTIARP 26
MNG+FF GRFI V +P
Sbjct: 141 AMNGKFFDGRFILVKFGQP 159
>ref|XP_002280240.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Vitis
vinifera]
Length = 145
Score = 81.3 bits (199), Expect = 1e-13
Identities = 39/65 (60%), Positives = 50/65 (76%)
Frame = -1
Query: 262 TRIFIKGLSQATTEGVLAKAFSHFGKVNKVKIVRERRSGESLGFAYVWFDWEESAEMATK 83
TRIFIKGL Q+T EG L KAFS FG+V+KV+I R + S + LGFA+ WF EESA++A K
Sbjct: 64 TRIFIKGLPQSTCEGSLKKAFSQFGEVSKVRIKRNKISSQPLGFAFAWFTTEESAQLAVK 123
Query: 82 EMNGR 68
M+G+
Sbjct: 124 MMDGK 128
>ref|XP_006356682.1| PREDICTED: RNA-binding motif protein, Y chromosome, family 1 member
B-like isoform X2 [Solanum tuberosum]
Length = 156
Score = 79.3 bits (194), Expect = 5e-13
Identities = 37/68 (54%), Positives = 51/68 (75%)
Frame = -1
Query: 262 TRIFIKGLSQATTEGVLAKAFSHFGKVNKVKIVRERRSGESLGFAYVWFDWEESAEMATK 83
T IF+KGL+++T EG L FS FG V++VKI+ +++S ESLGFAY+WF ESA+ A +
Sbjct: 76 TIIFLKGLAKSTPEGRLKVVFSQFGDVSRVKIITDKKSKESLGFAYIWFPDNESAQAAVQ 135
Query: 82 EMNGRFFG 59
EMNG+ G
Sbjct: 136 EMNGKMAG 143
>ref|XP_006600317.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform X2 [Glycine max]
Length = 158
Score = 76.6 bits (187), Expect = 3e-12
Identities = 34/66 (51%), Positives = 50/66 (75%)
Frame = -1
Query: 259 RIFIKGLSQATTEGVLAKAFSHFGKVNKVKIVRERRSGESLGFAYVWFDWEESAEMATKE 80
+IF+KGL +T+EG L K FS FG+V +++ ++ SG+SLGFAY+WF EESA++A E
Sbjct: 69 KIFVKGLPLSTSEGHLMKVFSEFGEVTLIQLPIDKESGQSLGFAYIWFVKEESAQLAVLE 128
Query: 79 MNGRFF 62
MNG+ +
Sbjct: 129 MNGKVY 134
>ref|XP_006489292.1| PREDICTED: polyadenylate-binding protein RBP47C'-like isoform X2
[Citrus sinensis]
Length = 143
Score = 75.1 bits (183), Expect = 1e-11
Identities = 37/69 (53%), Positives = 51/69 (73%)
Frame = -1
Query: 262 TRIFIKGLSQATTEGVLAKAFSHFGKVNKVKIVRERRSGESLGFAYVWFDWEESAEMATK 83
T IFIKGL ++ TEG + KAFS FG+V +VKIV E+ S + LG A+VWF +ESA++A +
Sbjct: 75 TGIFIKGLPESMTEGRVKKAFSQFGEVVQVKIVTEKLSKQPLGSAFVWFSRKESADLAVE 134
Query: 82 EMNGRFFGG 56
MNG+ + G
Sbjct: 135 NMNGKVYLG 143
>gb|ABK22008.1| unknown [Picea sitchensis]
Length = 140
Score = 73.6 bits (179), Expect = 3e-11
Identities = 39/84 (46%), Positives = 52/84 (61%)
Frame = -1
Query: 262 TRIFIKGLSQATTEGVLAKAFSHFGKVNKVKIVRERRSGESLGFAYVWFDWEESAEMATK 83
T++F+ GLS TTE L +AFS FG+V +VK+V +R S S GF +V + E AE A
Sbjct: 32 TKLFVGGLSFYTTEKALTEAFSRFGEVVEVKVVMDRVSQRSKGFGFVQYASEADAERAKA 91
Query: 82 EMNGRFFGGRFIAVTIARPESHTS 11
EMNG+ GR I V +P+S S
Sbjct: 92 EMNGKVLSGRIIFVDTVKPKSQLS 115