BLASTX nr result

ID: Cocculus22_contig00024047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00024047
         (494 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269977.2| PREDICTED: histidine kinase 2-like [Vitis vi...    72   8e-11
ref|XP_004243558.1| PREDICTED: histidine kinase 2-like [Solanum ...    60   2e-07
ref|XP_006363005.1| PREDICTED: histidine kinase 2-like isoform X...    60   3e-07

>ref|XP_002269977.2| PREDICTED: histidine kinase 2-like [Vitis vinifera]
          Length = 1272

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 53/143 (37%), Positives = 72/143 (50%), Gaps = 12/143 (8%)
 Frame = +2

Query: 89  MSFSAIAGVLLKLPRLFLKICRSVLVRMALYCKVSGFQSKLSLHTKHKKAHSEEPRCSWX 268
           MSFSA+AGV LKL RL LKICR VL++M+L CK+SGF  +L  + K KK+       +  
Sbjct: 1   MSFSAVAGVFLKLSRLILKICRWVLLKMSLNCKLSGFSGRLPANLKLKKSKEPLHGSNCV 60

Query: 269 XXXXXXXXXXXXGGVTWFFLRVFSGLNDNGDLGRVDKVSDFWVKNARLLQGRFNLTKS-- 442
                        GV    +   S LN  G L R +K  D   + AR+L   FN++K+  
Sbjct: 61  RKWRRKFLLLWLLGVIIGLICFLSVLN-AGALSRKEKTPDLCEEKARILLEHFNVSKNQL 119

Query: 443 ---------SDQ-ETFKCMKRSG 481
                    SDQ  + +C K +G
Sbjct: 120 HSLASLFAESDQIASLECTKEAG 142


>ref|XP_004243558.1| PREDICTED: histidine kinase 2-like [Solanum lycopersicum]
          Length = 1262

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
 Frame = +2

Query: 89  MSFSAIAGVLLKLPRLFLKICRSVLVRMALYCKVSGFQSKLSLHTKHKKAHSE--EPRCS 262
           MSFSA++G  LK  R FLKICR +L++M+L CK+ G     S   + KKA      P C 
Sbjct: 1   MSFSALSGFALKFSRHFLKICRWILLKMSLNCKLLGMNGSFSSSFRLKKARESLPGPSCG 60

Query: 263 WXXXXXXXXXXXXXGGVTWFFLRVFSGLNDNGDLGRVDK-VSDFWVKNARLLQGRFNLTK 439
           W              G+ +F+L +    + NGD+    K  S+     +  L  RFN++K
Sbjct: 61  WKWQRKLLFLWLIFFGIGFFWLVI----SLNGDVYSWKKEASELNEDKSYFLLERFNVSK 116

Query: 440 SSDQE 454
              Q+
Sbjct: 117 EQIQD 121


>ref|XP_006363005.1| PREDICTED: histidine kinase 2-like isoform X1 [Solanum tuberosum]
          Length = 1263

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 42/124 (33%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
 Frame = +2

Query: 89  MSFSAIAGVLLKLPRLFLKICRSVLVRMALYCKVSGFQSKLSLHTKHKKAHSE--EPRCS 262
           MSFSA+ G  LKL R FLKICR +L++M+L CK+ G     S   + KKA      P C 
Sbjct: 1   MSFSALGGFALKLSRHFLKICRWILLKMSLNCKLLGMNGSFSSSFRLKKARESLPGPNCG 60

Query: 263 WXXXXXXXXXXXXXGGVTWFFLRVFSGLNDNGDLGRVDKVSDFWVKNARLLQGRFNLTKS 442
           W              G+ +F+L +   LN  G      + S+     +  L  RFN++K 
Sbjct: 61  WRWQRKLLFLWLIFFGIGFFWLVI--SLN-GGVYSWKQEASESNEDKSYFLLERFNVSKE 117

Query: 443 SDQE 454
             Q+
Sbjct: 118 QIQD 121


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