BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00023907
         (336 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D sub...   114   2e-23
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-...   112   7e-23
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   110   2e-22
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]   110   2e-22
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su...   108   6e-22
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su...   108   6e-22
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr...   108   6e-22
ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV su...   103   2e-20
ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV su...   103   2e-20
ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV su...   103   2e-20
ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV su...   103   2e-20
ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV su...   103   2e-20
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   103   2e-20
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub...   102   4e-20
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub...   102   4e-20
ref|XP_006391790.1| hypothetical protein EUTSA_v10023214mg [Eutr...   101   1e-19
gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus no...    99   8e-19
ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phas...    99   8e-19
ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phas...    99   8e-19
ref|XP_002886441.1| NRPD1a [Arabidopsis lyrata subsp. lyrata] gi...    98   1e-18

>ref|XP_004298730.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Fragaria
           vesca subsp. vesca]
          Length = 1438

 Score =  114 bits (284), Expect = 2e-23
 Identities = 58/108 (53%), Positives = 72/108 (66%)
 Frame = +2

Query: 2   FDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGW 181
           FD+ FP + VYIS GE+I+SS GSSWL+DT GN+F SL +    + LDI F+AQ VL  W
Sbjct: 546 FDYAFPSNGVYISNGELIASSEGSSWLRDTSGNLFQSLTEHCHGQVLDIFFSAQGVLCEW 605

Query: 182 ISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVD 325
           +SMRGL+VSLSDLY                Y LQEAE+ C I+QLM+D
Sbjct: 606 LSMRGLSVSLSDLYLASDTCSRKNLMEEIFYGLQEAEEACTIRQLMLD 653


>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
           cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
           polymerase II subunit RPB1-B, putative [Theobroma cacao]
          Length = 1484

 Score =  112 bits (279), Expect = 7e-23
 Identities = 60/108 (55%), Positives = 70/108 (64%)
 Frame = +2

Query: 2   FDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGW 181
           FD+ F  ++V I  GE+ISSS GS+WL+D DGN+F SLI  Y  K LD L+AAQEVL  W
Sbjct: 569 FDYDFTPNDVVIRNGELISSSEGSTWLRDADGNLFQSLIKHYQGKVLDFLYAAQEVLCEW 628

Query: 182 ISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVD 325
           +SMRGL+VSLSDLY                  LQE EQTC  KQLMVD
Sbjct: 629 LSMRGLSVSLSDLYLSSDSNSQKNMMDEIFCGLQEIEQTCNFKQLMVD 676


>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D
           subunit 1-like [Vitis vinifera]
          Length = 1560

 Score =  110 bits (275), Expect = 2e-22
 Identities = 59/108 (54%), Positives = 72/108 (66%)
 Frame = +2

Query: 2   FDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGW 181
           F++VFPL+ V IS GE+ISSS GS+WL+D DGN+F SL+     KALD L+AAQEVL  W
Sbjct: 588 FNYVFPLNGVRISDGELISSSDGSAWLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEW 647

Query: 182 ISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVD 325
           +SMRGL+VSLSD+Y                  L  AEQTC  KQL+VD
Sbjct: 648 LSMRGLSVSLSDIYLSSDSISRKNMIDEVFCGLLVAEQTCHFKQLLVD 695


>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
          Length = 1393

 Score =  110 bits (275), Expect = 2e-22
 Identities = 59/108 (54%), Positives = 72/108 (66%)
 Frame = +2

Query: 2   FDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGW 181
           F++VFPL+ V IS GE+ISSS GS+WL+D DGN+F SL+     KALD L+AAQEVL  W
Sbjct: 558 FNYVFPLNGVRISDGELISSSDGSAWLRDIDGNLFSSLVKDCQGKALDFLYAAQEVLCEW 617

Query: 182 ISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVD 325
           +SMRGL+VSLSD+Y                  L  AEQTC  KQL+VD
Sbjct: 618 LSMRGLSVSLSDIYLSSDSISRKNMIDEVFCGLLVAEQTCHFKQLLVD 665


>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
           [Citrus sinensis] gi|568847098|ref|XP_006477377.1|
           PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
           isoform X3 [Citrus sinensis]
           gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
           RNA polymerase IV subunit 1-like isoform X4 [Citrus
           sinensis]
          Length = 1443

 Score =  108 bits (271), Expect = 6e-22
 Identities = 56/111 (50%), Positives = 73/111 (65%)
 Frame = +2

Query: 2   FDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGW 181
           F++ FP  +VYIS G++IS+  GSSWL+D +GN+F  LI +Y  K LD L+AAQEVL  W
Sbjct: 556 FEYTFPSKDVYISGGKLISAE-GSSWLRDYEGNLFQYLIKRYQDKVLDFLYAAQEVLCEW 614

Query: 182 ISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVDPQM 334
           +S+RG+TVSLSDLY                Y L+EA+ TC  +QLMVD  M
Sbjct: 615 LSVRGMTVSLSDLYLASHSCSRKILMDEIFYGLREAQDTCNFQQLMVDSHM 665


>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
           [Citrus sinensis]
          Length = 1481

 Score =  108 bits (271), Expect = 6e-22
 Identities = 56/111 (50%), Positives = 73/111 (65%)
 Frame = +2

Query: 2   FDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGW 181
           F++ FP  +VYIS G++IS+  GSSWL+D +GN+F  LI +Y  K LD L+AAQEVL  W
Sbjct: 594 FEYTFPSKDVYISGGKLISAE-GSSWLRDYEGNLFQYLIKRYQDKVLDFLYAAQEVLCEW 652

Query: 182 ISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVDPQM 334
           +S+RG+TVSLSDLY                Y L+EA+ TC  +QLMVD  M
Sbjct: 653 LSVRGMTVSLSDLYLASHSCSRKILMDEIFYGLREAQDTCNFQQLMVDSHM 703


>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
           gi|557542783|gb|ESR53761.1| hypothetical protein
           CICLE_v10018489mg [Citrus clementina]
          Length = 1443

 Score =  108 bits (271), Expect = 6e-22
 Identities = 56/111 (50%), Positives = 73/111 (65%)
 Frame = +2

Query: 2   FDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGW 181
           F++ FP  +VYIS G++IS+  GSSWL+D +GN+F  LI +Y  K LD L+AAQEVL  W
Sbjct: 556 FEYTFPSKDVYISGGKLISAE-GSSWLRDYEGNLFQYLIKRYRDKVLDFLYAAQEVLCEW 614

Query: 182 ISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVDPQM 334
           +S+RG+TVSLSDLY                Y L+EA+ TC  +QLMVD  M
Sbjct: 615 LSVRGMTVSLSDLYLASHSCSRKILMDEIFYGLREAQDTCNFQQLMVDSHM 665


>ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Glycine
           max]
          Length = 1369

 Score =  103 bits (257), Expect = 2e-20
 Identities = 51/108 (47%), Positives = 68/108 (62%)
 Frame = +2

Query: 2   FDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGW 181
           FD+ FP D V +S GE++SSS  S WL+D+D N+F SL++ Y  K L+ L+ AQ+VL  W
Sbjct: 467 FDYSFPSDGVVVSDGELVSSSEASGWLRDSDYNVFQSLVEHYQGKTLNFLYTAQKVLCEW 526

Query: 182 ISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVD 325
           +SM G +VSLSDLY                Y LQ+AEQ C  KQL++D
Sbjct: 527 LSMTGFSVSLSDLYLSSDSYARKNMIEEIFYGLQDAEQACNFKQLLLD 574


>ref|XP_006573757.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X4
           [Glycine max]
          Length = 1381

 Score =  103 bits (257), Expect = 2e-20
 Identities = 51/108 (47%), Positives = 69/108 (63%)
 Frame = +2

Query: 2   FDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGW 181
           FD+ FP D V +S GE++SSS  S WL+D+D N+F SL++ Y  K L+ L+AAQ+VL  W
Sbjct: 476 FDYSFPSDGVVVSDGELVSSSEASGWLRDSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEW 535

Query: 182 ISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVD 325
           +SM G +VSLSDLY                Y LQ+AE+ C  KQL++D
Sbjct: 536 LSMTGFSVSLSDLYLSSDSYARENMIEEIFYGLQDAERACNFKQLLLD 583


>ref|XP_006573756.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
           [Glycine max]
          Length = 1455

 Score =  103 bits (257), Expect = 2e-20
 Identities = 51/108 (47%), Positives = 69/108 (63%)
 Frame = +2

Query: 2   FDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGW 181
           FD+ FP D V +S GE++SSS  S WL+D+D N+F SL++ Y  K L+ L+AAQ+VL  W
Sbjct: 553 FDYSFPSDGVVVSDGELVSSSEASGWLRDSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEW 612

Query: 182 ISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVD 325
           +SM G +VSLSDLY                Y LQ+AE+ C  KQL++D
Sbjct: 613 LSMTGFSVSLSDLYLSSDSYARENMIEEIFYGLQDAERACNFKQLLLD 660


>ref|XP_006573755.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
           [Glycine max]
          Length = 1457

 Score =  103 bits (257), Expect = 2e-20
 Identities = 51/108 (47%), Positives = 69/108 (63%)
 Frame = +2

Query: 2   FDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGW 181
           FD+ FP D V +S GE++SSS  S WL+D+D N+F SL++ Y  K L+ L+AAQ+VL  W
Sbjct: 553 FDYSFPSDGVVVSDGELVSSSEASGWLRDSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEW 612

Query: 182 ISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVD 325
           +SM G +VSLSDLY                Y LQ+AE+ C  KQL++D
Sbjct: 613 LSMTGFSVSLSDLYLSSDSYARENMIEEIFYGLQDAERACNFKQLLLD 660


>ref|XP_006573754.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
           [Glycine max]
          Length = 1458

 Score =  103 bits (257), Expect = 2e-20
 Identities = 51/108 (47%), Positives = 69/108 (63%)
 Frame = +2

Query: 2   FDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGW 181
           FD+ FP D V +S GE++SSS  S WL+D+D N+F SL++ Y  K L+ L+AAQ+VL  W
Sbjct: 553 FDYSFPSDGVVVSDGELVSSSEASGWLRDSDYNVFQSLVEHYQGKTLNFLYAAQKVLCEW 612

Query: 182 ISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVD 325
           +SM G +VSLSDLY                Y LQ+AE+ C  KQL++D
Sbjct: 613 LSMTGFSVSLSDLYLSSDSYARENMIEEIFYGLQDAERACNFKQLLLD 660


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 1475

 Score =  103 bits (257), Expect = 2e-20
 Identities = 56/108 (51%), Positives = 69/108 (63%)
 Frame = +2

Query: 2   FDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGW 181
           FD   P  +VYI  GE+ISS  GS WL+DTDGN+F SLI +   + LD L+ AQEVL  W
Sbjct: 561 FDHECPSSDVYIRDGELISSE-GSFWLRDTDGNLFQSLIKQCQDQVLDFLYIAQEVLCEW 619

Query: 182 ISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVD 325
           +SMRGL+VSLSDLY C              + LQ+A+ TC +KQ MVD
Sbjct: 620 LSMRGLSVSLSDLYLCPDSDSRENMMDEVLFGLQDAKGTCNMKQFMVD 667


>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
           [Cicer arietinum]
          Length = 1474

 Score =  102 bits (255), Expect = 4e-20
 Identities = 51/108 (47%), Positives = 65/108 (60%)
 Frame = +2

Query: 2   FDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGW 181
           FD+ FP D V++  GE+IS S  S WL+D+D N+F SL++ +  K LDIL  AQ+ L  W
Sbjct: 562 FDYAFPSDGVFVCDGELISCSEASGWLRDSDNNVFQSLVEHFQGKTLDILHGAQKALCEW 621

Query: 182 ISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVD 325
           +SM G +VSLSDLY                Y LQEAEQ C   QL+VD
Sbjct: 622 LSMTGFSVSLSDLYLSSDSYARKNMIEEISYGLQEAEQACDFNQLLVD 669


>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
           [Cicer arietinum] gi|502160026|ref|XP_004511608.1|
           PREDICTED: DNA-directed RNA polymerase D subunit 1-like
           isoform X2 [Cicer arietinum]
           gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
           RNA polymerase D subunit 1-like isoform X3 [Cicer
           arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
           DNA-directed RNA polymerase D subunit 1-like isoform X4
           [Cicer arietinum]
          Length = 1475

 Score =  102 bits (255), Expect = 4e-20
 Identities = 51/108 (47%), Positives = 65/108 (60%)
 Frame = +2

Query: 2   FDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGW 181
           FD+ FP D V++  GE+IS S  S WL+D+D N+F SL++ +  K LDIL  AQ+ L  W
Sbjct: 562 FDYAFPSDGVFVCDGELISCSEASGWLRDSDNNVFQSLVEHFQGKTLDILHGAQKALCEW 621

Query: 182 ISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVD 325
           +SM G +VSLSDLY                Y LQEAEQ C   QL+VD
Sbjct: 622 LSMTGFSVSLSDLYLSSDSYARKNMIEEISYGLQEAEQACDFNQLLVD 669


>ref|XP_006391790.1| hypothetical protein EUTSA_v10023214mg [Eutrema salsugineum]
           gi|557088296|gb|ESQ29076.1| hypothetical protein
           EUTSA_v10023214mg [Eutrema salsugineum]
          Length = 1465

 Score =  101 bits (251), Expect = 1e-19
 Identities = 51/108 (47%), Positives = 70/108 (64%)
 Frame = +2

Query: 2   FDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGW 181
           FD+ +PL+ V +S GE++SSS GS+WL+D +GN    L+     K LDI+++AQE+L  W
Sbjct: 562 FDYSYPLNNVVVSNGELLSSSEGSAWLRDGEGNFIQGLLKHDKGKVLDIIYSAQEMLSEW 621

Query: 182 ISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVD 325
           + MRGL+VSL+DLYF               Y LQEAEQ C  +QLMV+
Sbjct: 622 LLMRGLSVSLADLYFSSDSQSRRNLTDEITYGLQEAEQVCNKQQLMVE 669


>gb|EXC17779.1| DNA-directed RNA polymerase D subunit 1 [Morus notabilis]
          Length = 1410

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 56/106 (52%), Positives = 66/106 (62%)
 Frame = +2

Query: 2   FDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGW 181
           FD+VF    VYI  GE+IS+  GSSWL+DTD NIF SL   +  K LDILFAAQE+L  W
Sbjct: 515 FDYVFSSANVYIKNGELISAE-GSSWLRDTD-NIFQSLAKNFPDKVLDILFAAQEILCEW 572

Query: 182 ISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLM 319
           +S RGL+VSL DL                 Y LQEAEQ C+ KQL+
Sbjct: 573 LSTRGLSVSLLDLNLSSDPSSWKNMKDEIFYGLQEAEQACMFKQLL 618


>ref|XP_007158454.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
           gi|561031869|gb|ESW30448.1| hypothetical protein
           PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1464

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 49/108 (45%), Positives = 67/108 (62%)
 Frame = +2

Query: 2   FDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGW 181
           FD+ FP D V +S GE++SS   S WL+D+D N+F  L++ +  K+L+ LFAAQ VL  W
Sbjct: 549 FDYSFPSDGVVVSDGELVSSFEASGWLRDSDCNVFQGLVEHFQGKSLNFLFAAQNVLCEW 608

Query: 182 ISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVD 325
           +SM G +VSLSDLY                Y LQ+AE+ C  KQL++D
Sbjct: 609 LSMTGFSVSLSDLYLSSDSYARKNMIEEICYGLQDAEKACNFKQLLLD 656


>ref|XP_007158453.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
           gi|561031868|gb|ESW30447.1| hypothetical protein
           PHAVU_002G153700g [Phaseolus vulgaris]
          Length = 1463

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 49/108 (45%), Positives = 67/108 (62%)
 Frame = +2

Query: 2   FDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGW 181
           FD+ FP D V +S GE++SS   S WL+D+D N+F  L++ +  K+L+ LFAAQ VL  W
Sbjct: 549 FDYSFPSDGVVVSDGELVSSFEASGWLRDSDCNVFQGLVEHFQGKSLNFLFAAQNVLCEW 608

Query: 182 ISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVD 325
           +SM G +VSLSDLY                Y LQ+AE+ C  KQL++D
Sbjct: 609 LSMTGFSVSLSDLYLSSDSYARKNMIEEICYGLQDAEKACNFKQLLLD 656


>ref|XP_002886441.1| NRPD1a [Arabidopsis lyrata subsp. lyrata]
           gi|297332282|gb|EFH62700.1| NRPD1a [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1456

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 49/108 (45%), Positives = 69/108 (63%)
 Frame = +2

Query: 2   FDFVFPLDEVYISKGEIISSSLGSSWLQDTDGNIFCSLIDKYGYKALDILFAAQEVLLGW 181
           FD+ +PL++V +S GE++S S GS+WL+D +GN    LI     K LDI+++AQE+L  W
Sbjct: 555 FDYTYPLNDVVVSNGELLSFSEGSAWLRDGEGNFIQGLIKHDKRKVLDIIYSAQEMLSQW 614

Query: 182 ISMRGLTVSLSDLYFCXXXXXXXXXXXXXHYALQEAEQTCIIKQLMVD 325
           + MRGL+VSL+DLY                Y L+EAEQ C  +QLMV+
Sbjct: 615 LLMRGLSVSLADLYLSSDPQSRKNLTEEISYGLREAEQVCNKQQLMVE 662