BLASTX nr result
ID: Cocculus22_contig00023621
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00023621
(659 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ADL63963.1| ribosomal protein S3 [Pleea tenuifolia] 49 2e-07
gb|ADL63941.1| ribosomal protein S3 [Orontium aquaticum] 49 3e-07
gb|AEZ04369.1| ribosomal protein S3, partial (mitochondrion) [Mi... 50 4e-07
gb|AEZ04367.1| ribosomal protein S3, partial (mitochondrion) [Ma... 50 4e-07
gb|AEZ04370.1| ribosomal protein S3, partial (mitochondrion) [Ne... 50 4e-07
ref|YP_006280951.1| ribosomal protein S3 (mitochondrion) [Spirod... 49 5e-07
gb|ADL64040.1| ribosomal protein S3 [Xanthosoma mafaffa] 49 5e-07
gb|ADL64026.1| ribosomal protein S3 [Triantha racemosa] 49 5e-07
gb|ABO42386.1| ribosomal protein S3 [Galearia filiformis] 49 7e-07
gb|ADL63928.1| ribosomal protein S3 [Nelumbo nucifera] 47 9e-07
gb|ADL63850.1| ribosomal protein S3 [Euptelea polyandra] 47 9e-07
gb|AEZ04362.1| ribosomal protein S3, partial (mitochondrion) [Co... 49 9e-07
gb|ADL64031.1| ribosomal protein S3 [Trochodendron aralioides] 47 9e-07
gb|ADL64020.1| ribosomal protein S3 [Tetracentron sinense] 47 9e-07
gb|ADL64015.1| ribosomal protein S3 [Takhtajania perrieri] 47 9e-07
gb|ADL63837.1| ribosomal protein S3 [Drimys winteri] 47 9e-07
gb|ADL63780.1| ribosomal protein S3 [Buxus sempervirens] 47 9e-07
gb|ADL63762.1| ribosomal protein S3 [Atherosperma moschatum] 47 9e-07
gb|ABO42353.1| ribosomal protein S3 [Androstachys johnsonii] 48 9e-07
ref|YP_762482.1| ribosomal protein S3 [Tripsacum dactyloides] gi... 49 1e-06
>gb|ADL63963.1| ribosomal protein S3 [Pleea tenuifolia]
Length = 476
Score = 49.3 bits (116), Expect(2) = 2e-07
Identities = 27/52 (51%), Positives = 31/52 (59%)
Frame = -2
Query: 208 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 53
F++E TSEKKC A+K LIHFI Q NDL F+ T K FP TF F
Sbjct: 221 FFVESSTSEKKCLAQAKKRLIHFIRQANDLRFAGTTKTTISLFPFFGATFFF 272
Score = 32.3 bits (72), Expect(2) = 2e-07
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 72 GC*LFFSKNGIAVYNNHFIEDVQE 1
G FF ++G+ VYNN FIED +E
Sbjct: 267 GATFFFPRDGVGVYNNLFIEDARE 290
>gb|ADL63941.1| ribosomal protein S3 [Orontium aquaticum]
Length = 477
Score = 49.3 bits (116), Expect(2) = 3e-07
Identities = 27/52 (51%), Positives = 31/52 (59%)
Frame = -2
Query: 208 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 53
F++E TSEKKC A+K LIHFI Q NDL F+ T K FP TF F
Sbjct: 222 FFVESSTSEKKCLAQAKKRLIHFIRQANDLRFAGTTKTTISLFPFFGATFFF 273
Score = 31.6 bits (70), Expect(2) = 3e-07
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 72 GC*LFFSKNGIAVYNNHFIEDVQE 1
G FF ++G+ VYNN F+ED +E
Sbjct: 268 GATFFFPRDGVGVYNNLFLEDARE 291
>gb|AEZ04369.1| ribosomal protein S3, partial (mitochondrion) [Microstachys
chamaelea]
Length = 484
Score = 49.7 bits (117), Expect(2) = 4e-07
Identities = 27/52 (51%), Positives = 32/52 (61%)
Frame = -2
Query: 208 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 53
F++E TSEKKC + A+K L HFI Q NDL F+ TKK FP TF F
Sbjct: 232 FFVESSTSEKKCLSEAKKRLTHFIRQANDLRFAGTKKTTISLFPFFGATFFF 283
Score = 30.8 bits (68), Expect(2) = 4e-07
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 72 GC*LFFSKNGIAVYNNHFIEDVQE 1
G FF ++G+ VYNN F ED +E
Sbjct: 278 GATFFFPRDGVGVYNNLFFEDARE 301
>gb|AEZ04367.1| ribosomal protein S3, partial (mitochondrion) [Mabea sp. Bell et
al. 94-30]
Length = 482
Score = 49.7 bits (117), Expect(2) = 4e-07
Identities = 27/52 (51%), Positives = 32/52 (61%)
Frame = -2
Query: 208 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 53
F++E TSEKKC + A+K L HFI Q NDL F+ TKK FP TF F
Sbjct: 230 FFVESSTSEKKCLSEAKKRLTHFIRQANDLRFAGTKKTTISLFPFFGATFFF 281
Score = 30.8 bits (68), Expect(2) = 4e-07
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 72 GC*LFFSKNGIAVYNNHFIEDVQE 1
G FF ++G+ VYNN F ED +E
Sbjct: 276 GATFFFPRDGVGVYNNLFFEDARE 299
>gb|AEZ04370.1| ribosomal protein S3, partial (mitochondrion) [Nealchornea
yapurensis]
Length = 323
Score = 49.7 bits (117), Expect(2) = 4e-07
Identities = 27/52 (51%), Positives = 32/52 (61%)
Frame = -2
Query: 208 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 53
F++E TSEKKC + A+K L HFI Q NDL F+ TKK FP TF F
Sbjct: 230 FFVESSTSEKKCLSEAKKRLTHFIRQANDLRFAGTKKTTISLFPFFGATFFF 281
Score = 30.8 bits (68), Expect(2) = 4e-07
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 72 GC*LFFSKNGIAVYNNHFIEDVQE 1
G FF ++G+ VYNN F ED +E
Sbjct: 276 GATFFFPRDGVGVYNNLFFEDARE 299
>ref|YP_006280951.1| ribosomal protein S3 (mitochondrion) [Spirodela polyrhiza]
gi|385252653|gb|AFI54961.1| ribosomal protein S3
(mitochondrion) [Spirodela polyrhiza]
Length = 551
Score = 49.3 bits (116), Expect(2) = 5e-07
Identities = 27/52 (51%), Positives = 31/52 (59%)
Frame = -2
Query: 208 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 53
F++E TSEKKC A+K LIHFI Q NDL F+ T K FP TF F
Sbjct: 279 FFVESSTSEKKCLAQAKKRLIHFIRQANDLRFAGTTKTTISLFPFFGATFFF 330
Score = 30.8 bits (68), Expect(2) = 5e-07
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 72 GC*LFFSKNGIAVYNNHFIEDVQE 1
G FF ++G+ VYNN F ED +E
Sbjct: 325 GATFFFPRDGVGVYNNLFFEDARE 348
>gb|ADL64040.1| ribosomal protein S3 [Xanthosoma mafaffa]
Length = 479
Score = 49.3 bits (116), Expect(2) = 5e-07
Identities = 27/52 (51%), Positives = 31/52 (59%)
Frame = -2
Query: 208 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 53
F++E TSEKKC A+K LIHFI Q NDL F+ T K FP TF F
Sbjct: 224 FFVESSTSEKKCLAQAKKRLIHFIRQANDLRFAGTTKTTISFFPFFGATFFF 275
Score = 30.8 bits (68), Expect(2) = 5e-07
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 72 GC*LFFSKNGIAVYNNHFIEDVQE 1
G FF ++G+ VYNN F ED +E
Sbjct: 270 GATFFFPRDGVGVYNNLFFEDARE 293
>gb|ADL64026.1| ribosomal protein S3 [Triantha racemosa]
Length = 415
Score = 49.3 bits (116), Expect(2) = 5e-07
Identities = 27/52 (51%), Positives = 31/52 (59%)
Frame = -2
Query: 208 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 53
F++E TSEKKC A+K LIHFI Q NDL F+ T K FP TF F
Sbjct: 217 FFVESSTSEKKCLAQAKKRLIHFIRQANDLRFAGTTKTTISLFPFFGATFFF 268
Score = 30.8 bits (68), Expect(2) = 5e-07
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 72 GC*LFFSKNGIAVYNNHFIEDVQE 1
G FF ++G+ VYNN F ED +E
Sbjct: 263 GATFFFPRDGVGVYNNLFFEDARE 286
>gb|ABO42386.1| ribosomal protein S3 [Galearia filiformis]
Length = 466
Score = 49.3 bits (116), Expect(2) = 7e-07
Identities = 27/52 (51%), Positives = 31/52 (59%)
Frame = -2
Query: 208 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 53
F++E TSEKKC A+K L HFI Q NDL F+ TKK FP TF F
Sbjct: 220 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFAGTKKTTISLFPFFGATFFF 271
Score = 30.4 bits (67), Expect(2) = 7e-07
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 72 GC*LFFSKNGIAVYNNHFIEDVQE 1
G FF ++G+ VYNN F ED +E
Sbjct: 266 GATFFFLRDGVGVYNNLFFEDARE 289
>gb|ADL63928.1| ribosomal protein S3 [Nelumbo nucifera]
Length = 483
Score = 47.0 bits (110), Expect(2) = 9e-07
Identities = 26/52 (50%), Positives = 30/52 (57%)
Frame = -2
Query: 208 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 53
F++E TSEKKC A+K L HFI Q NDL F+ T K FP TF F
Sbjct: 228 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF 279
Score = 32.3 bits (72), Expect(2) = 9e-07
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 72 GC*LFFSKNGIAVYNNHFIEDVQE 1
G FF ++G+ VYNN FIED +E
Sbjct: 274 GATFFFPRDGVGVYNNLFIEDARE 297
>gb|ADL63850.1| ribosomal protein S3 [Euptelea polyandra]
Length = 483
Score = 47.0 bits (110), Expect(2) = 9e-07
Identities = 26/52 (50%), Positives = 30/52 (57%)
Frame = -2
Query: 208 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 53
F++E TSEKKC A+K L HFI Q NDL F+ T K FP TF F
Sbjct: 228 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF 279
Score = 32.3 bits (72), Expect(2) = 9e-07
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 72 GC*LFFSKNGIAVYNNHFIEDVQE 1
G FF ++G+ VYNN FIED +E
Sbjct: 274 GATFFFPRDGVGVYNNLFIEDARE 297
>gb|AEZ04362.1| ribosomal protein S3, partial (mitochondrion) [Colliguaja
integerrima]
Length = 482
Score = 48.5 bits (114), Expect(2) = 9e-07
Identities = 26/52 (50%), Positives = 32/52 (61%)
Frame = -2
Query: 208 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 53
F++E TSEKKC + A+K L HFI Q NDL F+ T+K FP TF F
Sbjct: 230 FFVESSTSEKKCLSEAKKRLTHFIRQANDLRFAGTRKTTISLFPFFGATFFF 281
Score = 30.8 bits (68), Expect(2) = 9e-07
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 72 GC*LFFSKNGIAVYNNHFIEDVQE 1
G FF ++G+ VYNN F ED +E
Sbjct: 276 GATFFFPRDGVGVYNNLFFEDARE 299
>gb|ADL64031.1| ribosomal protein S3 [Trochodendron aralioides]
Length = 478
Score = 47.0 bits (110), Expect(2) = 9e-07
Identities = 26/52 (50%), Positives = 30/52 (57%)
Frame = -2
Query: 208 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 53
F++E TSEKKC A+K L HFI Q NDL F+ T K FP TF F
Sbjct: 223 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF 274
Score = 32.3 bits (72), Expect(2) = 9e-07
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 72 GC*LFFSKNGIAVYNNHFIEDVQE 1
G FF ++G+ VYNN FIED +E
Sbjct: 269 GATFFFPRDGVGVYNNLFIEDARE 292
>gb|ADL64020.1| ribosomal protein S3 [Tetracentron sinense]
Length = 478
Score = 47.0 bits (110), Expect(2) = 9e-07
Identities = 26/52 (50%), Positives = 30/52 (57%)
Frame = -2
Query: 208 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 53
F++E TSEKKC A+K L HFI Q NDL F+ T K FP TF F
Sbjct: 223 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF 274
Score = 32.3 bits (72), Expect(2) = 9e-07
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 72 GC*LFFSKNGIAVYNNHFIEDVQE 1
G FF ++G+ VYNN FIED +E
Sbjct: 269 GATFFFPRDGVGVYNNLFIEDARE 292
>gb|ADL64015.1| ribosomal protein S3 [Takhtajania perrieri]
Length = 478
Score = 47.0 bits (110), Expect(2) = 9e-07
Identities = 26/52 (50%), Positives = 30/52 (57%)
Frame = -2
Query: 208 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 53
F++E TSEKKC A+K L HFI Q NDL F+ T K FP TF F
Sbjct: 223 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF 274
Score = 32.3 bits (72), Expect(2) = 9e-07
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 72 GC*LFFSKNGIAVYNNHFIEDVQE 1
G FF ++G+ VYNN FIED +E
Sbjct: 269 GATFFFPRDGVGVYNNLFIEDARE 292
>gb|ADL63837.1| ribosomal protein S3 [Drimys winteri]
Length = 478
Score = 47.0 bits (110), Expect(2) = 9e-07
Identities = 26/52 (50%), Positives = 30/52 (57%)
Frame = -2
Query: 208 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 53
F++E TSEKKC A+K L HFI Q NDL F+ T K FP TF F
Sbjct: 223 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF 274
Score = 32.3 bits (72), Expect(2) = 9e-07
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 72 GC*LFFSKNGIAVYNNHFIEDVQE 1
G FF ++G+ VYNN FIED +E
Sbjct: 269 GATFFFPRDGVGVYNNLFIEDARE 292
>gb|ADL63780.1| ribosomal protein S3 [Buxus sempervirens]
Length = 478
Score = 47.0 bits (110), Expect(2) = 9e-07
Identities = 26/52 (50%), Positives = 30/52 (57%)
Frame = -2
Query: 208 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 53
F++E TSEKKC A+K L HFI Q NDL F+ T K FP TF F
Sbjct: 223 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF 274
Score = 32.3 bits (72), Expect(2) = 9e-07
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 72 GC*LFFSKNGIAVYNNHFIEDVQE 1
G FF ++G+ VYNN FIED +E
Sbjct: 269 GATFFFPRDGVGVYNNLFIEDARE 292
>gb|ADL63762.1| ribosomal protein S3 [Atherosperma moschatum]
Length = 478
Score = 47.0 bits (110), Expect(2) = 9e-07
Identities = 26/52 (50%), Positives = 30/52 (57%)
Frame = -2
Query: 208 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 53
F++E TSEKKC A+K L HFI Q NDL F+ T K FP TF F
Sbjct: 223 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFF 274
Score = 32.3 bits (72), Expect(2) = 9e-07
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3
Query: 72 GC*LFFSKNGIAVYNNHFIEDVQE 1
G FF ++G+ VYNN FIED +E
Sbjct: 269 GATFFFPRDGVGVYNNLFIEDARE 292
>gb|ABO42353.1| ribosomal protein S3 [Androstachys johnsonii]
Length = 467
Score = 48.1 bits (113), Expect(2) = 9e-07
Identities = 27/52 (51%), Positives = 30/52 (57%)
Frame = -2
Query: 208 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 53
F++E TSEKKC A+K L HFI Q NDL FS T K FP TF F
Sbjct: 221 FFVESSTSEKKCLAEAKKRLTHFIRQANDLRFSGTTKTTISLFPFFGATFFF 272
Score = 31.2 bits (69), Expect(2) = 9e-07
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 72 GC*LFFSKNGIAVYNNHFIEDVQE 1
G FF ++G+ VYNN F ED +E
Sbjct: 267 GATFFFPRDGVGVYNNPFFEDARE 290
>ref|YP_762482.1| ribosomal protein S3 [Tripsacum dactyloides]
gi|114432116|gb|ABI74665.1| ribosomal protein S3
(mitochondrion) [Tripsacum dactyloides]
Length = 559
Score = 49.3 bits (116), Expect(2) = 1e-06
Identities = 27/52 (51%), Positives = 31/52 (59%)
Frame = -2
Query: 208 FWLEG*TSEKKCSTLAEKSLIHFICQVNDLCFSRTKKPPSRSFPTGVLTFLF 53
F++E TSEKKC A+K LIHFI Q NDL F+ T K FP TF F
Sbjct: 288 FFVESSTSEKKCLARAKKRLIHFIRQANDLRFAGTTKTTISLFPFFGATFFF 339
Score = 29.6 bits (65), Expect(2) = 1e-06
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 72 GC*LFFSKNGIAVYNNHFIEDVQE 1
G FFS++G+ VYNN F E +E
Sbjct: 334 GATFFFSRDGVGVYNNPFFEYARE 357