BLASTX nr result
ID: Cocculus22_contig00023465
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00023465
(451 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002322376.2| hypothetical protein POPTR_0015s15360g [Popu... 133 3e-29
ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containi... 133 3e-29
ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containi... 131 1e-28
emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera] 131 1e-28
ref|XP_007024941.1| Pentatricopeptide repeat superfamily protein... 129 5e-28
ref|XP_007024939.1| Pentatricopeptide repeat (PPR-like) superfam... 129 5e-28
ref|XP_007139634.1| hypothetical protein PHAVU_008G046300g [Phas... 128 7e-28
ref|XP_002528370.1| pentatricopeptide repeat-containing protein,... 127 1e-27
gb|EYU26788.1| hypothetical protein MIMGU_mgv1a026368mg, partial... 127 2e-27
gb|EXB61730.1| hypothetical protein L484_008796 [Morus notabilis] 121 9e-26
ref|XP_006448708.1| hypothetical protein CICLE_v10014445mg [Citr... 121 1e-25
ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223... 120 2e-25
ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containi... 120 2e-25
ref|XP_006362578.1| PREDICTED: pentatricopeptide repeat-containi... 119 4e-25
ref|XP_004489104.1| PREDICTED: pentatricopeptide repeat-containi... 119 4e-25
ref|XP_004489102.1| PREDICTED: pentatricopeptide repeat-containi... 119 4e-25
ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp.... 119 6e-25
ref|XP_004293756.1| PREDICTED: pentatricopeptide repeat-containi... 118 7e-25
ref|XP_006468480.1| PREDICTED: pentatricopeptide repeat-containi... 118 1e-24
ref|XP_004233900.1| PREDICTED: pentatricopeptide repeat-containi... 118 1e-24
>ref|XP_002322376.2| hypothetical protein POPTR_0015s15360g [Populus trichocarpa]
gi|550322786|gb|EEF06503.2| hypothetical protein
POPTR_0015s15360g [Populus trichocarpa]
Length = 594
Score = 133 bits (334), Expect = 3e-29
Identities = 62/94 (65%), Positives = 78/94 (82%)
Frame = -1
Query: 451 TRMTVAYEYCKKDDSASAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFQRLLDE 272
TR+T+AYEYCK+DDSA+AM +L+RLDKKLW RTV TLIRKL SE KV MA FF +LLD+
Sbjct: 498 TRLTLAYEYCKQDDSATAMVILERLDKKLWIRTVNTLIRKLCSERKVGMAVLFFHKLLDK 557
Query: 271 DPNADQITLAGFMTACYDNNKYSVASELSGRITK 170
D N D++TL F TACY++NKY++ S+LS RI+K
Sbjct: 558 DQNVDRVTLTAFTTACYESNKYALVSDLSERISK 591
>ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like isoform X1 [Glycine max]
gi|571479155|ref|XP_006587776.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X2 [Glycine max]
gi|571479157|ref|XP_006587777.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X3 [Glycine max]
Length = 693
Score = 133 bits (334), Expect = 3e-29
Identities = 62/94 (65%), Positives = 77/94 (81%)
Frame = -1
Query: 451 TRMTVAYEYCKKDDSASAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFQRLLDE 272
TR+T+AYEYCK DD SAM VL+RL+KKLW RTV TL+RKL SE KV MAA FF +LLD+
Sbjct: 590 TRVTLAYEYCKIDDGCSAMVVLERLEKKLWVRTVNTLVRKLCSERKVGMAALFFHKLLDK 649
Query: 271 DPNADQITLAGFMTACYDNNKYSVASELSGRITK 170
DPN +++T+A FMTACY++NKY + S+LS RI K
Sbjct: 650 DPNVNRVTIAAFMTACYESNKYDLVSDLSARIYK 683
>ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 131 bits (329), Expect = 1e-28
Identities = 59/92 (64%), Positives = 78/92 (84%)
Frame = -1
Query: 451 TRMTVAYEYCKKDDSASAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFQRLLDE 272
TR+T+AYEYCKKDDS++A+ VLDRL+K+ W RTV TL+RKL SEGK++MAA FF +LLD+
Sbjct: 612 TRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDK 671
Query: 271 DPNADQITLAGFMTACYDNNKYSVASELSGRI 176
+PN +++TL GFM CY++NKY + SELS RI
Sbjct: 672 EPNVNRVTLLGFMNKCYESNKYGLVSELSERI 703
>emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 131 bits (329), Expect = 1e-28
Identities = 59/92 (64%), Positives = 78/92 (84%)
Frame = -1
Query: 451 TRMTVAYEYCKKDDSASAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFQRLLDE 272
TR+T+AYEYCKKDDS++A+ VLDRL+K+ W RTV TL+RKL SEGK++MAA FF +LLD+
Sbjct: 612 TRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDK 671
Query: 271 DPNADQITLAGFMTACYDNNKYSVASELSGRI 176
+PN +++TL GFM CY++NKY + SELS RI
Sbjct: 672 EPNVNRVTLLGFMNKCYESNKYGLVSELSERI 703
>ref|XP_007024941.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
gi|508780307|gb|EOY27563.1| Pentatricopeptide repeat
superfamily protein [Theobroma cacao]
Length = 738
Score = 129 bits (323), Expect = 5e-28
Identities = 61/94 (64%), Positives = 78/94 (82%)
Frame = -1
Query: 451 TRMTVAYEYCKKDDSASAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFQRLLDE 272
TR+T+AYEYCKK DSA AM +L+RL+KKLW RTV TLIRKL SE KV +AA FF RLLD+
Sbjct: 642 TRLTIAYEYCKKGDSAVAMVMLERLEKKLWMRTVNTLIRKLCSEKKVGIAALFFHRLLDK 701
Query: 271 DPNADQITLAGFMTACYDNNKYSVASELSGRITK 170
D N D++TLA FMTACY+ +K+++ S+L+ RI+K
Sbjct: 702 DRNVDRVTLAAFMTACYETDKFALVSDLNERISK 735
>ref|XP_007024939.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao] gi|508780305|gb|EOY27561.1| Pentatricopeptide
repeat (PPR-like) superfamily protein [Theobroma cacao]
Length = 692
Score = 129 bits (323), Expect = 5e-28
Identities = 61/94 (64%), Positives = 78/94 (82%)
Frame = -1
Query: 451 TRMTVAYEYCKKDDSASAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFQRLLDE 272
TR+T+AYEYCKK DSA AM +L+RL+KKLW RTV TLIRKL SE KV +AA FF RLLD+
Sbjct: 596 TRLTIAYEYCKKGDSAVAMVMLERLEKKLWMRTVNTLIRKLCSEKKVGIAALFFHRLLDK 655
Query: 271 DPNADQITLAGFMTACYDNNKYSVASELSGRITK 170
D N D++TLA FMTACY+ +K+++ S+L+ RI+K
Sbjct: 656 DRNVDRVTLAAFMTACYETDKFALVSDLNERISK 689
>ref|XP_007139634.1| hypothetical protein PHAVU_008G046300g [Phaseolus vulgaris]
gi|593332419|ref|XP_007139635.1| hypothetical protein
PHAVU_008G046300g [Phaseolus vulgaris]
gi|561012767|gb|ESW11628.1| hypothetical protein
PHAVU_008G046300g [Phaseolus vulgaris]
gi|561012768|gb|ESW11629.1| hypothetical protein
PHAVU_008G046300g [Phaseolus vulgaris]
Length = 698
Score = 128 bits (322), Expect = 7e-28
Identities = 61/94 (64%), Positives = 78/94 (82%)
Frame = -1
Query: 451 TRMTVAYEYCKKDDSASAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFQRLLDE 272
TR+T+AYEYCK +DS SAM VL+RL+KK W RTV TL+RKLSSE KV MAA FF++LLD
Sbjct: 596 TRVTLAYEYCKIEDSCSAMVVLERLEKKPWIRTVNTLVRKLSSEKKVGMAALFFRKLLDM 655
Query: 271 DPNADQITLAGFMTACYDNNKYSVASELSGRITK 170
DP+ D++TLA FMTACY+++ Y++ S+LS RI K
Sbjct: 656 DPHVDRVTLAAFMTACYESSNYALVSDLSSRIYK 689
>ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532238|gb|EEF34042.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 712
Score = 127 bits (320), Expect = 1e-27
Identities = 61/94 (64%), Positives = 79/94 (84%)
Frame = -1
Query: 451 TRMTVAYEYCKKDDSASAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFQRLLDE 272
TR+T+AYEYCK+ DSA+AM +L+RL+KKLW RTV TLIRKL SE KV +AA FF +LLD+
Sbjct: 616 TRVTLAYEYCKQGDSATAMIILERLEKKLWIRTVNTLIRKLCSEKKVGVAALFFHKLLDK 675
Query: 271 DPNADQITLAGFMTACYDNNKYSVASELSGRITK 170
D N D+ITLA F TACY++NK+++ S+LS RI+K
Sbjct: 676 DLNVDRITLAAFTTACYESNKFALVSDLSERISK 709
>gb|EYU26788.1| hypothetical protein MIMGU_mgv1a026368mg, partial [Mimulus
guttatus]
Length = 662
Score = 127 bits (319), Expect = 2e-27
Identities = 59/94 (62%), Positives = 76/94 (80%)
Frame = -1
Query: 451 TRMTVAYEYCKKDDSASAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFQRLLDE 272
TR T+AYE+CKKD+S +AMA+LDRLDKKLW RTV TL+RKL SE KV++AA FF +LLD
Sbjct: 567 TRTTIAYEFCKKDESFTAMALLDRLDKKLWVRTVSTLVRKLCSEQKVDIAAQFFDKLLDA 626
Query: 271 DPNADQITLAGFMTACYDNNKYSVASELSGRITK 170
+ D++TLA F TACYD+N Y++ S++S RI K
Sbjct: 627 NQTLDRVTLAAFTTACYDSNHYALVSDMSKRIRK 660
>gb|EXB61730.1| hypothetical protein L484_008796 [Morus notabilis]
Length = 731
Score = 121 bits (304), Expect = 9e-26
Identities = 57/94 (60%), Positives = 76/94 (80%)
Frame = -1
Query: 451 TRMTVAYEYCKKDDSASAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFQRLLDE 272
TR+T+AYEYCKK++ ++AMA+L+RLDK+LW RTV TLIRKL + KV MAA FF L+ +
Sbjct: 625 TRVTLAYEYCKKENFSAAMAILERLDKRLWIRTVNTLIRKLCNNKKVGMAALFFHELVGK 684
Query: 271 DPNADQITLAGFMTACYDNNKYSVASELSGRITK 170
D N D++TLA F TACY++NKY++ SEL+ RI K
Sbjct: 685 DRNVDRVTLAAFTTACYESNKYALVSELTERIGK 718
>ref|XP_006448708.1| hypothetical protein CICLE_v10014445mg [Citrus clementina]
gi|557551319|gb|ESR61948.1| hypothetical protein
CICLE_v10014445mg [Citrus clementina]
Length = 707
Score = 121 bits (303), Expect = 1e-25
Identities = 58/94 (61%), Positives = 75/94 (79%)
Frame = -1
Query: 451 TRMTVAYEYCKKDDSASAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFQRLLDE 272
TR+T+AYEYCK+ DSA+AM VL+ LDKKLW RTV TLIRKL SE +V MAA FF +LLD+
Sbjct: 611 TRVTLAYEYCKQGDSATAMIVLESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLDK 670
Query: 271 DPNADQITLAGFMTACYDNNKYSVASELSGRITK 170
D N D+++LA ACY++NKY++ S+LS RI +
Sbjct: 671 DQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 704
>ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 120 bits (301), Expect = 2e-25
Identities = 57/94 (60%), Positives = 75/94 (79%)
Frame = -1
Query: 451 TRMTVAYEYCKKDDSASAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFQRLLDE 272
TR+T+ YEYCK +D ASAM +L+RL+KKLW RTV TLIRKL E KV +AA FF +LLD+
Sbjct: 1219 TRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAALFFHKLLDK 1278
Query: 271 DPNADQITLAGFMTACYDNNKYSVASELSGRITK 170
+ N D++TLA F TAC ++NKY++ S+LS RI+K
Sbjct: 1279 EVNVDRVTLAAFNTACIESNKYALVSDLSERISK 1312
>ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 120 bits (301), Expect = 2e-25
Identities = 57/94 (60%), Positives = 75/94 (79%)
Frame = -1
Query: 451 TRMTVAYEYCKKDDSASAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFQRLLDE 272
TR+T+ YEYCK +D ASAM +L+RL+KKLW RTV TLIRKL E KV +AA FF +LLD+
Sbjct: 632 TRVTLTYEYCKTEDFASAMVILERLNKKLWIRTVHTLIRKLCCEKKVALAALFFHKLLDK 691
Query: 271 DPNADQITLAGFMTACYDNNKYSVASELSGRITK 170
+ N D++TLA F TAC ++NKY++ S+LS RI+K
Sbjct: 692 EVNVDRVTLAAFNTACIESNKYALVSDLSERISK 725
>ref|XP_006362578.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like isoform X1 [Solanum tuberosum]
gi|565393841|ref|XP_006362579.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X2 [Solanum tuberosum]
gi|565393843|ref|XP_006362580.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X3 [Solanum tuberosum]
Length = 716
Score = 119 bits (298), Expect = 4e-25
Identities = 54/95 (56%), Positives = 74/95 (77%)
Frame = -1
Query: 451 TRMTVAYEYCKKDDSASAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFQRLLDE 272
TR+TVAYEYCK ++ AM +LDRL+KKLW RTV TL+RKL SE V++AA FF +LLD+
Sbjct: 615 TRLTVAYEYCKNNEPTIAMGLLDRLEKKLWIRTVSTLVRKLCSEKNVDVAALFFHKLLDK 674
Query: 271 DPNADQITLAGFMTACYDNNKYSVASELSGRITKN 167
+ D++TLA FM+ACY++N Y + S ++ RITK+
Sbjct: 675 QQSVDRVTLAAFMSACYESNNYDLVSSMNERITKD 709
>ref|XP_004489104.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like isoform X3 [Cicer arietinum]
gi|502090051|ref|XP_004489105.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X4 [Cicer arietinum]
Length = 685
Score = 119 bits (298), Expect = 4e-25
Identities = 57/94 (60%), Positives = 73/94 (77%)
Frame = -1
Query: 451 TRMTVAYEYCKKDDSASAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFQRLLDE 272
TR+T+AYEYCK DD SAM +L+RL+KKLW RT TL+RKL SE KV MAA FF +LLD
Sbjct: 582 TRVTLAYEYCKIDDCLSAMVILERLEKKLWIRTANTLVRKLCSERKVGMAALFFNKLLDM 641
Query: 271 DPNADQITLAGFMTACYDNNKYSVASELSGRITK 170
D + +++ LA FMTACY++N Y++ S+LS RI K
Sbjct: 642 DLHVNRVALAVFMTACYESNNYALVSDLSARIYK 675
>ref|XP_004489102.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like isoform X1 [Cicer arietinum]
gi|502090045|ref|XP_004489103.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X2 [Cicer arietinum]
Length = 705
Score = 119 bits (298), Expect = 4e-25
Identities = 57/94 (60%), Positives = 73/94 (77%)
Frame = -1
Query: 451 TRMTVAYEYCKKDDSASAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFQRLLDE 272
TR+T+AYEYCK DD SAM +L+RL+KKLW RT TL+RKL SE KV MAA FF +LLD
Sbjct: 602 TRVTLAYEYCKIDDCLSAMVILERLEKKLWIRTANTLVRKLCSERKVGMAALFFNKLLDM 661
Query: 271 DPNADQITLAGFMTACYDNNKYSVASELSGRITK 170
D + +++ LA FMTACY++N Y++ S+LS RI K
Sbjct: 662 DLHVNRVALAVFMTACYESNNYALVSDLSARIYK 695
>ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 119 bits (297), Expect = 6e-25
Identities = 56/94 (59%), Positives = 79/94 (84%)
Frame = -1
Query: 451 TRMTVAYEYCKKDDSASAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFQRLLDE 272
TR+T+AYEYCK++DSASAM VL+ LDKKLW RTV+TL+RKL SE KV +AA FFQ+LL++
Sbjct: 628 TRVTLAYEYCKRNDSASAMIVLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEK 687
Query: 271 DPNADQITLAGFMTACYDNNKYSVASELSGRITK 170
D +AD++TLA F TAC ++ K ++ ++L+ RI++
Sbjct: 688 DSSADRVTLAAFTTACSESGKNNLVADLTERISR 721
>ref|XP_004293756.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Fragaria vesca subsp. vesca]
Length = 705
Score = 118 bits (296), Expect = 7e-25
Identities = 53/94 (56%), Positives = 75/94 (79%)
Frame = -1
Query: 451 TRMTVAYEYCKKDDSASAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFQRLLDE 272
TR+T+ ++YC+KDD A+AM +LDRL+KK W RTV TL+RKL E KV +AA FF +L+D+
Sbjct: 609 TRLTLTHKYCQKDDYATAMVILDRLEKKYWIRTVNTLVRKLCCEKKVGIAALFFHKLVDK 668
Query: 271 DPNADQITLAGFMTACYDNNKYSVASELSGRITK 170
D N D++TL F TACY++NKY++ S+L+ RI+K
Sbjct: 669 DQNVDRVTLQAFTTACYESNKYALLSDLTERISK 702
>ref|XP_006468480.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Citrus sinensis]
Length = 707
Score = 118 bits (295), Expect = 1e-24
Identities = 56/94 (59%), Positives = 74/94 (78%)
Frame = -1
Query: 451 TRMTVAYEYCKKDDSASAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFQRLLDE 272
TR+T+AYEYCK+ DSA+AM +L+ LDKKLW RTV TLIRKL SE +V MAA FF +LL +
Sbjct: 611 TRVTLAYEYCKQGDSATAMIILESLDKKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGK 670
Query: 271 DPNADQITLAGFMTACYDNNKYSVASELSGRITK 170
D N D+++LA ACY++NKY++ S+LS RI +
Sbjct: 671 DQNVDRVSLAALKNACYESNKYALFSDLSQRIAE 704
>ref|XP_004233900.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Solanum lycopersicum]
Length = 716
Score = 118 bits (295), Expect = 1e-24
Identities = 53/95 (55%), Positives = 73/95 (76%)
Frame = -1
Query: 451 TRMTVAYEYCKKDDSASAMAVLDRLDKKLWTRTVKTLIRKLSSEGKVEMAASFFQRLLDE 272
TR+TVAYEYCK ++ M +LD+L+KKLW RTV TL+RKL SE V +AA FF +LLD+
Sbjct: 615 TRLTVAYEYCKNNEPTITMGLLDKLEKKLWVRTVSTLVRKLCSEKNVNVAALFFHKLLDK 674
Query: 271 DPNADQITLAGFMTACYDNNKYSVASELSGRITKN 167
+ D++TLA FM+ACY++NKY + S ++ RITK+
Sbjct: 675 QQSVDRVTLAAFMSACYESNKYDLVSSMNERITKD 709