BLASTX nr result
ID: Cocculus22_contig00023462
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00023462
(415 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006354741.1| PREDICTED: PHD and RING finger domain-contai... 81 2e-13
gb|EXB89099.1| PHD and RING finger domain-containing protein 1 [... 79 7e-13
ref|XP_004241616.1| PREDICTED: uncharacterized protein LOC101264... 76 4e-12
ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266... 73 5e-11
ref|XP_004965231.1| PREDICTED: uncharacterized protein LOC101772... 70 4e-10
ref|XP_007208714.1| hypothetical protein PRUPE_ppa001439mg [Prun... 69 7e-10
ref|XP_004171857.1| PREDICTED: uncharacterized protein LOC101229... 69 7e-10
ref|XP_004137609.1| PREDICTED: uncharacterized protein LOC101204... 69 7e-10
gb|AFW86355.1| hypothetical protein ZEAMMB73_340557 [Zea mays] 69 9e-10
ref|NP_001151466.1| PHD-finger family protein [Zea mays] gi|1956... 69 9e-10
gb|EYU38152.1| hypothetical protein MIMGU_mgv1a003288mg [Mimulus... 68 2e-09
gb|AGH18689.1| PHD-finger family protein [Triticum monococcum] 68 2e-09
emb|CBI39562.3| unnamed protein product [Vitis vinifera] 68 2e-09
ref|XP_002278421.1| PREDICTED: uncharacterized protein LOC100240... 68 2e-09
ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap... 68 2e-09
ref|XP_004302260.1| PREDICTED: uncharacterized protein LOC101295... 67 3e-09
ref|XP_002436876.1| hypothetical protein SORBIDRAFT_10g010430 [S... 67 3e-09
ref|XP_007155199.1| hypothetical protein PHAVU_003G181800g [Phas... 67 3e-09
ref|XP_004301094.1| PREDICTED: uncharacterized protein LOC101292... 67 3e-09
ref|XP_002319493.2| PHD finger family protein [Populus trichocar... 66 6e-09
>ref|XP_006354741.1| PREDICTED: PHD and RING finger domain-containing protein
C126.07c-like [Solanum tuberosum]
Length = 650
Score = 80.9 bits (198), Expect = 2e-13
Identities = 40/79 (50%), Positives = 53/79 (67%), Gaps = 6/79 (7%)
Frame = -3
Query: 221 PAKRPRTLGV---TQSPMSSSKGKEKIEQIEDGNDVTDAKSESNICGICFSEDGKA---I 60
P+KR +TL + SP SS KGK K+E ++D+++ESN CGIC +E G I
Sbjct: 15 PSKRVKTLTLGSPESSPSSSDKGKSKLE-------LSDSETESNCCGICLTETGHGTTII 67
Query: 59 RGWIDCCNHYFCFICIMEW 3
RG IDCC+HYFCF+CI+EW
Sbjct: 68 RGVIDCCDHYFCFVCIIEW 86
>gb|EXB89099.1| PHD and RING finger domain-containing protein 1 [Morus notabilis]
Length = 654
Score = 79.0 bits (193), Expect = 7e-13
Identities = 42/76 (55%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = -3
Query: 227 TSPAKRPRTLGVTQSPMSSSKGKEKIEQIEDGNDVTDAK-SESNICGICFSEDGKAIRGW 51
+SP+KR +T TQS S K K +ED N A+ S S C ICF ED KAIRG
Sbjct: 10 SSPSKRLKTGVSTQSQSSKCKSK-----LEDENQAPVAENSASRNCAICFLEDVKAIRGE 64
Query: 50 IDCCNHYFCFICIMEW 3
IDCC+HYFCF+CIMEW
Sbjct: 65 IDCCDHYFCFLCIMEW 80
>ref|XP_004241616.1| PREDICTED: uncharacterized protein LOC101264529 [Solanum
lycopersicum]
Length = 650
Score = 76.3 bits (186), Expect = 4e-12
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Frame = -3
Query: 221 PAKRPRTLGVTQ---SPMSSSKGKEKIEQIEDGNDVTDAKSESNICGICFSEDGKA---I 60
P KR +TL ++ SP SS KGK K+E +++ ++E + CGIC +E G I
Sbjct: 15 PNKRVKTLTLSSPESSPSSSDKGKSKLE-------LSNLETEQDCCGICLTETGHGTTII 67
Query: 59 RGWIDCCNHYFCFICIMEW 3
RG IDCCNHYFCF+CI+EW
Sbjct: 68 RGVIDCCNHYFCFVCIIEW 86
>ref|XP_002273302.1| PREDICTED: uncharacterized protein LOC100266325 [Vitis vinifera]
gi|297734114|emb|CBI15361.3| unnamed protein product
[Vitis vinifera]
Length = 648
Score = 72.8 bits (177), Expect = 5e-11
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Frame = -3
Query: 230 STSPAKRPRTLGVTQSPMSSSKGKEKIEQIEDGNDVTDAKS----ESNICGICFSEDGKA 63
+T + R R+ + ++ S E + N AK +SN CGIC ED +A
Sbjct: 4 ATDKSPRQRSDSAIEYRIAMSSDSETLGSDISANQCPKAKEAVDFDSNCCGICLLEDDRA 63
Query: 62 IRGWIDCCNHYFCFICIMEW 3
IRGW+D C+HYFCF+CIMEW
Sbjct: 64 IRGWVDSCDHYFCFVCIMEW 83
>ref|XP_004965231.1| PREDICTED: uncharacterized protein LOC101772949 [Setaria italica]
Length = 744
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/60 (50%), Positives = 39/60 (65%)
Frame = -3
Query: 182 PMSSSKGKEKIEQIEDGNDVTDAKSESNICGICFSEDGKAIRGWIDCCNHYFCFICIMEW 3
P SSKGK K++ D +A S +CGIC+ + +AIRG +DCC HYFCF+CIM W
Sbjct: 14 PSPSSKGKAKMD------DEAEADSSGKMCGICYVDGRQAIRGELDCCAHYFCFVCIMAW 67
>ref|XP_007208714.1| hypothetical protein PRUPE_ppa001439mg [Prunus persica]
gi|462404356|gb|EMJ09913.1| hypothetical protein
PRUPE_ppa001439mg [Prunus persica]
Length = 828
Score = 68.9 bits (167), Expect = 7e-10
Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = -3
Query: 167 KGKEKIEQIEDGNDVTDAKSESNICGICFSEDGKA-IRGWIDCCNHYFCFICIMEW 3
KGKEKIEQ++ + +CGIC SE+ K +RG +DCC HYFCF+CIMEW
Sbjct: 326 KGKEKIEQVK-------VEVGKQVCGICLSEEDKRRVRGTLDCCTHYFCFVCIMEW 374
>ref|XP_004171857.1| PREDICTED: uncharacterized protein LOC101229274 [Cucumis sativus]
Length = 398
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = -3
Query: 230 STSPAKRPRTLGVTQSPMSSSKGKEKIEQIEDGNDVTDAKSESN---ICGICFSEDGKAI 60
S + + R + P +S+K + E +E G + + + N IC ICFSEDGKA
Sbjct: 8 SFASSSEDRLKALISCPSASAKFGNEEEFLEGGFEESHLLIDDNPSSICVICFSEDGKAE 67
Query: 59 RGWIDCCNHYFCFICIMEW 3
RG +D C+HYFCF+CIMEW
Sbjct: 68 RGKLDSCDHYFCFVCIMEW 86
>ref|XP_004137609.1| PREDICTED: uncharacterized protein LOC101204928 [Cucumis sativus]
Length = 375
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Frame = -3
Query: 230 STSPAKRPRTLGVTQSPMSSSKGKEKIEQIEDGNDVTDAKSESN---ICGICFSEDGKAI 60
S + + R + P +S+K + E +E G + + + N IC ICFSEDGKA
Sbjct: 8 SFASSSEDRLKALISCPSASAKFGNEEEFLEGGFEESHLLIDDNPSSICVICFSEDGKAE 67
Query: 59 RGWIDCCNHYFCFICIMEW 3
RG +D C+HYFCF+CIMEW
Sbjct: 68 RGKLDSCDHYFCFVCIMEW 86
>gb|AFW86355.1| hypothetical protein ZEAMMB73_340557 [Zea mays]
Length = 661
Score = 68.6 bits (166), Expect = 9e-10
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = -3
Query: 182 PMSSSKGKEKIEQIEDGNDVTDAKSESNICGICFSEDGKAIRGWIDCCNHYFCFICIMEW 3
P SSKGK K+++ E+ +A+ +CGIC+ + +AIRG +DCC H+FCF+CIM W
Sbjct: 14 PSESSKGKGKMDEEEED----EAEGAEKMCGICYLDGRRAIRGELDCCAHFFCFVCIMAW 69
>ref|NP_001151466.1| PHD-finger family protein [Zea mays] gi|195646974|gb|ACG42955.1|
PHD-finger family protein [Zea mays]
gi|413953705|gb|AFW86354.1| PHD-finger family protein
[Zea mays]
Length = 733
Score = 68.6 bits (166), Expect = 9e-10
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = -3
Query: 182 PMSSSKGKEKIEQIEDGNDVTDAKSESNICGICFSEDGKAIRGWIDCCNHYFCFICIMEW 3
P SSKGK K+++ E+ +A+ +CGIC+ + +AIRG +DCC H+FCF+CIM W
Sbjct: 14 PSESSKGKGKMDEEEED----EAEGAEKMCGICYLDGRRAIRGELDCCAHFFCFVCIMAW 69
>gb|EYU38152.1| hypothetical protein MIMGU_mgv1a003288mg [Mimulus guttatus]
Length = 594
Score = 67.8 bits (164), Expect = 2e-09
Identities = 39/77 (50%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = -3
Query: 227 TSPAKRPRTLGVTQSPMSSSKGKEKIEQIEDGNDVTDAKSESNICGICFSEDGKA--IRG 54
TSP KR +TL SP GK KIE+ E N+ D CGIC SE G IRG
Sbjct: 11 TSPNKRLKTLDQF-SPSFLPGGKSKIEE-EVENESADC------CGICLSEAGNGGIIRG 62
Query: 53 WIDCCNHYFCFICIMEW 3
++D C+HYFCF+CIMEW
Sbjct: 63 YVDSCDHYFCFVCIMEW 79
>gb|AGH18689.1| PHD-finger family protein [Triticum monococcum]
Length = 939
Score = 67.8 bits (164), Expect = 2e-09
Identities = 29/60 (48%), Positives = 40/60 (66%)
Frame = -3
Query: 182 PMSSSKGKEKIEQIEDGNDVTDAKSESNICGICFSEDGKAIRGWIDCCNHYFCFICIMEW 3
P S+SKGK +++ D + A E CGICF++ +AIRG +DCC H+FCF+CIM W
Sbjct: 12 PSSASKGKARMD---DDAEAVAAAPEGVPCGICFTDSRRAIRGELDCCAHHFCFVCIMAW 68
>emb|CBI39562.3| unnamed protein product [Vitis vinifera]
Length = 404
Score = 67.8 bits (164), Expect = 2e-09
Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = -3
Query: 167 KGKEKIEQIEDGNDVTDAKSESNICGICFSEDGKA-IRGWIDCCNHYFCFICIMEW 3
KGKEK+E ++ N+V +CGIC SE+GK +RG +DCC+HYFCF CIMEW
Sbjct: 21 KGKEKVEDVK--NEVG-----KQVCGICLSEEGKRRVRGTLDCCSHYFCFGCIMEW 69
>ref|XP_002278421.1| PREDICTED: uncharacterized protein LOC100240780 [Vitis vinifera]
Length = 733
Score = 67.8 bits (164), Expect = 2e-09
Identities = 31/56 (55%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = -3
Query: 167 KGKEKIEQIEDGNDVTDAKSESNICGICFSEDGKA-IRGWIDCCNHYFCFICIMEW 3
KGKEK+E ++ N+V +CGIC SE+GK +RG +DCC+HYFCF CIMEW
Sbjct: 240 KGKEKVEDVK--NEVG-----KQVCGICLSEEGKRRVRGTLDCCSHYFCFGCIMEW 288
>ref|XP_002514596.1| splicing factor, arginine/serine-rich 2,rnap interacting protein,
putative [Ricinus communis] gi|223546200|gb|EEF47702.1|
splicing factor, arginine/serine-rich 2,rnap interacting
protein, putative [Ricinus communis]
Length = 632
Score = 67.8 bits (164), Expect = 2e-09
Identities = 37/78 (47%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = -3
Query: 230 STSPAKRPRTLGVTQSPMSSSKGKEKIEQIEDGNDVTDAKS--ESNICGICFSEDGKAIR 57
+ SP KR + L T + + E + GN +T +S ES ICGIC SE+ A+R
Sbjct: 3 TNSPNKRLKIL--TPNSRVKQESDEYDFEGRQGNRLTPMESTGESLICGICLSENWSAMR 60
Query: 56 GWIDCCNHYFCFICIMEW 3
G ID C+HYFCFICIMEW
Sbjct: 61 GQIDSCDHYFCFICIMEW 78
>ref|XP_004302260.1| PREDICTED: uncharacterized protein LOC101295635 [Fragaria vesca
subsp. vesca]
Length = 899
Score = 67.0 bits (162), Expect = 3e-09
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = -3
Query: 167 KGKEKIEQIEDGNDVTDAKSESNICGICFSEDGKA-IRGWIDCCNHYFCFICIMEW 3
KGKEKIEQ++ + +CGIC SE+ K +RG +DCC HYFCF CIMEW
Sbjct: 400 KGKEKIEQVK-------VEVVKQVCGICLSEEDKRRVRGTLDCCTHYFCFSCIMEW 448
>ref|XP_002436876.1| hypothetical protein SORBIDRAFT_10g010430 [Sorghum bicolor]
gi|241915099|gb|EER88243.1| hypothetical protein
SORBIDRAFT_10g010430 [Sorghum bicolor]
Length = 776
Score = 67.0 bits (162), Expect = 3e-09
Identities = 28/60 (46%), Positives = 39/60 (65%)
Frame = -3
Query: 182 PMSSSKGKEKIEQIEDGNDVTDAKSESNICGICFSEDGKAIRGWIDCCNHYFCFICIMEW 3
P SSKGK K++ D +A+ +CGIC+ + +AIRG +DCC H+FCF+CIM W
Sbjct: 15 PSESSKGKGKMD------DDVEAEGAEKMCGICYVDGRRAIRGELDCCAHFFCFVCIMAW 68
>ref|XP_007155199.1| hypothetical protein PHAVU_003G181800g [Phaseolus vulgaris]
gi|561028553|gb|ESW27193.1| hypothetical protein
PHAVU_003G181800g [Phaseolus vulgaris]
Length = 609
Score = 66.6 bits (161), Expect = 3e-09
Identities = 30/66 (45%), Positives = 44/66 (66%)
Frame = -3
Query: 200 LGVTQSPMSSSKGKEKIEQIEDGNDVTDAKSESNICGICFSEDGKAIRGWIDCCNHYFCF 21
+G + + +SS K + + Q+E+ D + ES CGIC++ G +I G IDCC+HYFCF
Sbjct: 1 MGSSSASLSSPKKRVR-SQVEEDED----EEESVCCGICYAGRGVSIAGEIDCCSHYFCF 55
Query: 20 ICIMEW 3
+CIMEW
Sbjct: 56 VCIMEW 61
>ref|XP_004301094.1| PREDICTED: uncharacterized protein LOC101292906 [Fragaria vesca
subsp. vesca]
Length = 1002
Score = 66.6 bits (161), Expect = 3e-09
Identities = 33/76 (43%), Positives = 41/76 (53%)
Frame = -3
Query: 230 STSPAKRPRTLGVTQSPMSSSKGKEKIEQIEDGNDVTDAKSESNICGICFSEDGKAIRGW 51
S+SP KR +TL E + +D S + C ICF +DGKA RG
Sbjct: 8 SSSPNKRLKTLNPQIESQPDPNQPETPPETDD--------SPPDRCAICFLDDGKAARGK 59
Query: 50 IDCCNHYFCFICIMEW 3
IDCC+HYFCF+CI EW
Sbjct: 60 IDCCDHYFCFLCIKEW 75
>ref|XP_002319493.2| PHD finger family protein [Populus trichocarpa]
gi|550324673|gb|EEE95416.2| PHD finger family protein
[Populus trichocarpa]
Length = 810
Score = 65.9 bits (159), Expect = 6e-09
Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Frame = -3
Query: 311 FHLSMTNDSEQEGSTAEQPWSSLDFEV-STSPAKRPRTLG--VTQSPMSSSKGKEKIEQI 141
+ +++ + ++ A Q + L + S+S KR + G Q+ KGKEK+++
Sbjct: 254 YEYTLSEEEREQVREASQLYGELKTSLRSSSVGKRIQENGDLCQQTKPVGRKGKEKVKE- 312
Query: 140 EDGNDVTDAKSE--SNICGICFSEDGKA-IRGWIDCCNHYFCFICIMEW 3
KSE +CGIC SE+ K +RG +DCC+HYFCF CIMEW
Sbjct: 313 --------EKSELGKQVCGICLSEEDKRRLRGTLDCCSHYFCFTCIMEW 353