BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00023380
         (263 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36057.3| unnamed protein product [Vitis vinifera]              113   2e-23
ref|XP_002515963.1| DNA repair/transcription protein met18/mms19...   112   4e-23
gb|EXB74582.1| hypothetical protein L484_026279 [Morus notabilis]     112   7e-23
ref|XP_006385450.1| hypothetical protein POPTR_0003s04720g [Popu...   111   1e-22
ref|XP_007024310.1| MMS19 nucleotide excision repair protein, pu...   108   6e-22
ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair ...   108   1e-21
ref|XP_007150605.1| hypothetical protein PHAVU_005G166100g [Phas...   107   2e-21
ref|XP_006597169.1| PREDICTED: MMS19 nucleotide excision repair ...   105   7e-21
ref|XP_006597168.1| PREDICTED: MMS19 nucleotide excision repair ...   105   7e-21
ref|XP_006597167.1| PREDICTED: MMS19 nucleotide excision repair ...   105   7e-21
ref|XP_003546956.1| PREDICTED: MMS19 nucleotide excision repair ...   105   7e-21
ref|XP_006595125.1| PREDICTED: DNA repair/transcription protein ...   103   3e-20
ref|XP_006595124.1| PREDICTED: DNA repair/transcription protein ...   103   3e-20
ref|XP_004155994.1| PREDICTED: MMS19 nucleotide excision repair ...   103   3e-20
ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair ...   103   3e-20
ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair ...   102   6e-20
ref|XP_007217541.1| hypothetical protein PRUPE_ppa023072mg [Prun...   102   6e-20
ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair ...   102   7e-20
ref|XP_006853692.1| hypothetical protein AMTR_s00056p00136660 [A...   102   7e-20
ref|XP_003597674.1| MMS19 nucleotide excision repair protein-lik...   102   7e-20

>emb|CBI36057.3| unnamed protein product [Vitis vinifera]
          Length = 1146

 Score =  113 bits (283), Expect = 2e-23
 Identities = 54/87 (62%), Positives = 64/87 (73%)
 Frame = -3

Query: 261  DKDXXXXXXXXXXXXXLDENGQEAVTENAHIVTKLLVGLVSYPHMMLVRETAIQCLVAMA 82
            DKD             +D+NGQE V ENAH++   L+GLV YPHMM+VRETAIQCLVAM+
Sbjct: 1037 DKDILYNLLLVLSGILMDKNGQETVVENAHVIINCLIGLVGYPHMMVVRETAIQCLVAMS 1096

Query: 81   GLPHTRIYPMRTQVLEALLKAVDDPKR 1
             LPH RIYPMRTQVL ++ KA+DDPKR
Sbjct: 1097 RLPHARIYPMRTQVLRSVQKALDDPKR 1123


>ref|XP_002515963.1| DNA repair/transcription protein met18/mms19, putative [Ricinus
            communis] gi|223544868|gb|EEF46383.1| DNA
            repair/transcription protein met18/mms19, putative
            [Ricinus communis]
          Length = 1174

 Score =  112 bits (281), Expect = 4e-23
 Identities = 54/87 (62%), Positives = 65/87 (74%)
 Frame = -3

Query: 261  DKDXXXXXXXXXXXXXLDENGQEAVTENAHIVTKLLVGLVSYPHMMLVRETAIQCLVAMA 82
            DKD              D NG+EAV ENAHI+ K L+ LV+YPHMML+RETA+QCLVAM+
Sbjct: 1065 DKDIMYGLLLVLSGILTDTNGKEAVIENAHIIIKCLIELVAYPHMMLIRETAVQCLVAMS 1124

Query: 81   GLPHTRIYPMRTQVLEALLKAVDDPKR 1
             LPHTRIYP+R QVL+A+ KA+DDPKR
Sbjct: 1125 ELPHTRIYPVRIQVLQAISKALDDPKR 1151


>gb|EXB74582.1| hypothetical protein L484_026279 [Morus notabilis]
          Length = 1210

 Score =  112 bits (279), Expect = 7e-23
 Identities = 54/87 (62%), Positives = 64/87 (73%)
 Frame = -3

Query: 261  DKDXXXXXXXXXXXXXLDENGQEAVTENAHIVTKLLVGLVSYPHMMLVRETAIQCLVAMA 82
            DKD              D+ G+EAV ENAH V   L+GL++YPHMMLVRET IQCLVAM+
Sbjct: 1075 DKDQLYSLLLVLSAILTDKKGEEAVIENAHSVINCLIGLIAYPHMMLVRETTIQCLVAMS 1134

Query: 81   GLPHTRIYPMRTQVLEALLKAVDDPKR 1
             LPHTRIYPMRT+VL+A+ KA+DDPKR
Sbjct: 1135 KLPHTRIYPMRTKVLQAMSKALDDPKR 1161


>ref|XP_006385450.1| hypothetical protein POPTR_0003s04720g [Populus trichocarpa]
            gi|550342418|gb|ERP63247.1| hypothetical protein
            POPTR_0003s04720g [Populus trichocarpa]
          Length = 913

 Score =  111 bits (277), Expect = 1e-22
 Identities = 54/87 (62%), Positives = 62/87 (71%)
 Frame = -3

Query: 261  DKDXXXXXXXXXXXXXLDENGQEAVTENAHIVTKLLVGLVSYPHMMLVRETAIQCLVAMA 82
            DKD              D+NGQE V ENAHI+   L+G V+YPH MLVRET IQCLVAM+
Sbjct: 811  DKDIMYSLLLVLSGILTDKNGQEGVIENAHIIINYLIGFVTYPHTMLVRETTIQCLVAMS 870

Query: 81   GLPHTRIYPMRTQVLEALLKAVDDPKR 1
             LPHTRIYPMR QVL+A+ KA+DDPKR
Sbjct: 871  ELPHTRIYPMRIQVLQAVSKALDDPKR 897


>ref|XP_007024310.1| MMS19 nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao] gi|590619491|ref|XP_007024311.1| MMS19
            nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao] gi|508779676|gb|EOY26932.1| MMS19
            nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao] gi|508779677|gb|EOY26933.1| MMS19
            nucleotide excision repair protein, putative isoform 1
            [Theobroma cacao]
          Length = 1149

 Score =  108 bits (271), Expect = 6e-22
 Identities = 51/87 (58%), Positives = 66/87 (75%)
 Frame = -3

Query: 261  DKDXXXXXXXXXXXXXLDENGQEAVTENAHIVTKLLVGLVSYPHMMLVRETAIQCLVAMA 82
            DKD             +D+NGQEAV+++AH +T  L+ L+ YPHMMLVRETAIQCLVA++
Sbjct: 1040 DKDVIYGLLLVLSGILMDKNGQEAVSDSAHTITNRLIELIQYPHMMLVRETAIQCLVAIS 1099

Query: 81   GLPHTRIYPMRTQVLEALLKAVDDPKR 1
            GL + R+YPMRTQVL+A+ KA+DDPKR
Sbjct: 1100 GLSYARVYPMRTQVLQAIAKALDDPKR 1126


>ref|XP_006465695.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X2 [Citrus sinensis]
          Length = 1151

 Score =  108 bits (269), Expect = 1e-21
 Identities = 54/87 (62%), Positives = 63/87 (72%)
 Frame = -3

Query: 261  DKDXXXXXXXXXXXXXLDENGQEAVTENAHIVTKLLVGLVSYPHMMLVRETAIQCLVAMA 82
            DKD              D+NGQEAV E AHI+    + L+SYPHMMLVRETAIQCLVAM+
Sbjct: 1042 DKDIVYSLLLVLSGILTDKNGQEAVIECAHIIIDHSIILISYPHMMLVRETAIQCLVAMS 1101

Query: 81   GLPHTRIYPMRTQVLEALLKAVDDPKR 1
            GLPH RIYPMR QVL+A+ +A+DDPKR
Sbjct: 1102 GLPHARIYPMRRQVLQAVSRALDDPKR 1128


>ref|XP_007150605.1| hypothetical protein PHAVU_005G166100g [Phaseolus vulgaris]
            gi|561023869|gb|ESW22599.1| hypothetical protein
            PHAVU_005G166100g [Phaseolus vulgaris]
          Length = 1145

 Score =  107 bits (267), Expect = 2e-21
 Identities = 52/87 (59%), Positives = 63/87 (72%)
 Frame = -3

Query: 261  DKDXXXXXXXXXXXXXLDENGQEAVTENAHIVTKLLVGLVSYPHMMLVRETAIQCLVAMA 82
            DKD              ++NGQEAVTENAHI+   L+ LV YPH MLVRETAIQCLVA++
Sbjct: 1037 DKDMLYGLLLVLSCILTEKNGQEAVTENAHIIINCLIKLVDYPHKMLVRETAIQCLVALS 1096

Query: 81   GLPHTRIYPMRTQVLEALLKAVDDPKR 1
             LPH+RIYPMRTQVL+A+ K +DD +R
Sbjct: 1097 ELPHSRIYPMRTQVLQAISKCLDDTRR 1123


>ref|XP_006597169.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X4 [Glycine max]
          Length = 1095

 Score =  105 bits (262), Expect = 7e-21
 Identities = 52/87 (59%), Positives = 61/87 (70%)
 Frame = -3

Query: 261  DKDXXXXXXXXXXXXXLDENGQEAVTENAHIVTKLLVGLVSYPHMMLVRETAIQCLVAMA 82
            DKD             +++NGQEAV ENAHI+   L+ LV YPH MLVRETAIQCLVA++
Sbjct: 993  DKDMLYGLLLVLSGILMEKNGQEAVVENAHIIINCLIKLVGYPHKMLVRETAIQCLVALS 1052

Query: 81   GLPHTRIYPMRTQVLEALLKAVDDPKR 1
             LPH RIYPMRTQVL A+ K +DD KR
Sbjct: 1053 ELPHARIYPMRTQVLRAISKCLDDSKR 1079


>ref|XP_006597168.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X3 [Glycine max]
          Length = 1102

 Score =  105 bits (262), Expect = 7e-21
 Identities = 52/87 (59%), Positives = 61/87 (70%)
 Frame = -3

Query: 261  DKDXXXXXXXXXXXXXLDENGQEAVTENAHIVTKLLVGLVSYPHMMLVRETAIQCLVAMA 82
            DKD             +++NGQEAV ENAHI+   L+ LV YPH MLVRETAIQCLVA++
Sbjct: 1000 DKDMLYGLLLVLSGILMEKNGQEAVVENAHIIINCLIKLVGYPHKMLVRETAIQCLVALS 1059

Query: 81   GLPHTRIYPMRTQVLEALLKAVDDPKR 1
             LPH RIYPMRTQVL A+ K +DD KR
Sbjct: 1060 ELPHARIYPMRTQVLRAISKCLDDSKR 1086


>ref|XP_006597167.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X2 [Glycine max]
          Length = 1133

 Score =  105 bits (262), Expect = 7e-21
 Identities = 52/87 (59%), Positives = 61/87 (70%)
 Frame = -3

Query: 261  DKDXXXXXXXXXXXXXLDENGQEAVTENAHIVTKLLVGLVSYPHMMLVRETAIQCLVAMA 82
            DKD             +++NGQEAV ENAHI+   L+ LV YPH MLVRETAIQCLVA++
Sbjct: 1031 DKDMLYGLLLVLSGILMEKNGQEAVVENAHIIINCLIKLVGYPHKMLVRETAIQCLVALS 1090

Query: 81   GLPHTRIYPMRTQVLEALLKAVDDPKR 1
             LPH RIYPMRTQVL A+ K +DD KR
Sbjct: 1091 ELPHARIYPMRTQVLRAISKCLDDSKR 1117


>ref|XP_003546956.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X1 [Glycine max]
          Length = 1135

 Score =  105 bits (262), Expect = 7e-21
 Identities = 52/87 (59%), Positives = 61/87 (70%)
 Frame = -3

Query: 261  DKDXXXXXXXXXXXXXLDENGQEAVTENAHIVTKLLVGLVSYPHMMLVRETAIQCLVAMA 82
            DKD             +++NGQEAV ENAHI+   L+ LV YPH MLVRETAIQCLVA++
Sbjct: 1033 DKDMLYGLLLVLSGILMEKNGQEAVVENAHIIINCLIKLVGYPHKMLVRETAIQCLVALS 1092

Query: 81   GLPHTRIYPMRTQVLEALLKAVDDPKR 1
             LPH RIYPMRTQVL A+ K +DD KR
Sbjct: 1093 ELPHARIYPMRTQVLRAISKCLDDSKR 1119


>ref|XP_006595125.1| PREDICTED: DNA repair/transcription protein mms19-like isoform X2
            [Glycine max]
          Length = 1013

 Score =  103 bits (257), Expect = 3e-20
 Identities = 51/87 (58%), Positives = 59/87 (67%)
 Frame = -3

Query: 261  DKDXXXXXXXXXXXXXLDENGQEAVTENAHIVTKLLVGLVSYPHMMLVRETAIQCLVAMA 82
            DKD              ++NGQEA  ENAHI+   L+ LV YPH MLVRETAIQCLVA++
Sbjct: 911  DKDMLYGLLLVLSGILTEKNGQEAAIENAHIIINCLIKLVDYPHKMLVRETAIQCLVALS 970

Query: 81   GLPHTRIYPMRTQVLEALLKAVDDPKR 1
             LPH RIYPMRTQVL A+ K +DD KR
Sbjct: 971  ELPHARIYPMRTQVLRAISKCLDDSKR 997


>ref|XP_006595124.1| PREDICTED: DNA repair/transcription protein mms19-like isoform X1
            [Glycine max]
          Length = 1132

 Score =  103 bits (257), Expect = 3e-20
 Identities = 51/87 (58%), Positives = 59/87 (67%)
 Frame = -3

Query: 261  DKDXXXXXXXXXXXXXLDENGQEAVTENAHIVTKLLVGLVSYPHMMLVRETAIQCLVAMA 82
            DKD              ++NGQEA  ENAHI+   L+ LV YPH MLVRETAIQCLVA++
Sbjct: 1030 DKDMLYGLLLVLSGILTEKNGQEAAIENAHIIINCLIKLVDYPHKMLVRETAIQCLVALS 1089

Query: 81   GLPHTRIYPMRTQVLEALLKAVDDPKR 1
             LPH RIYPMRTQVL A+ K +DD KR
Sbjct: 1090 ELPHARIYPMRTQVLRAISKCLDDSKR 1116


>ref|XP_004155994.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
            sativus]
          Length = 914

 Score =  103 bits (257), Expect = 3e-20
 Identities = 49/70 (70%), Positives = 56/70 (80%)
 Frame = -3

Query: 210  DENGQEAVTENAHIVTKLLVGLVSYPHMMLVRETAIQCLVAMAGLPHTRIYPMRTQVLEA 31
            D+NGQEAVTENAH +   L GL  + HMMLVRETAIQCLVA++ LPH RIYPMR QVL  
Sbjct: 822  DKNGQEAVTENAHKIVDCLAGLTDFSHMMLVRETAIQCLVAVSELPHARIYPMRRQVLHV 881

Query: 30   LLKAVDDPKR 1
            + KA+DDPKR
Sbjct: 882  ISKALDDPKR 891


>ref|XP_004141784.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Cucumis
            sativus]
          Length = 1147

 Score =  103 bits (257), Expect = 3e-20
 Identities = 49/70 (70%), Positives = 56/70 (80%)
 Frame = -3

Query: 210  DENGQEAVTENAHIVTKLLVGLVSYPHMMLVRETAIQCLVAMAGLPHTRIYPMRTQVLEA 31
            D+NGQEAVTENAH +   L GL  + HMMLVRETAIQCLVA++ LPH RIYPMR QVL  
Sbjct: 1055 DKNGQEAVTENAHKIVDCLAGLTDFSHMMLVRETAIQCLVAVSELPHARIYPMRRQVLHV 1114

Query: 30   LLKAVDDPKR 1
            + KA+DDPKR
Sbjct: 1115 ISKALDDPKR 1124


>ref|XP_006465694.1| PREDICTED: MMS19 nucleotide excision repair protein homolog isoform
            X1 [Citrus sinensis]
          Length = 1155

 Score =  102 bits (254), Expect = 6e-20
 Identities = 54/91 (59%), Positives = 63/91 (69%), Gaps = 4/91 (4%)
 Frame = -3

Query: 261  DKDXXXXXXXXXXXXXLDENG----QEAVTENAHIVTKLLVGLVSYPHMMLVRETAIQCL 94
            DKD              D+NG    QEAV E AHI+    + L+SYPHMMLVRETAIQCL
Sbjct: 1042 DKDIVYSLLLVLSGILTDKNGKTIGQEAVIECAHIIIDHSIILISYPHMMLVRETAIQCL 1101

Query: 93   VAMAGLPHTRIYPMRTQVLEALLKAVDDPKR 1
            VAM+GLPH RIYPMR QVL+A+ +A+DDPKR
Sbjct: 1102 VAMSGLPHARIYPMRRQVLQAVSRALDDPKR 1132


>ref|XP_007217541.1| hypothetical protein PRUPE_ppa023072mg [Prunus persica]
            gi|462413691|gb|EMJ18740.1| hypothetical protein
            PRUPE_ppa023072mg [Prunus persica]
          Length = 1158

 Score =  102 bits (254), Expect = 6e-20
 Identities = 49/87 (56%), Positives = 60/87 (68%)
 Frame = -3

Query: 261  DKDXXXXXXXXXXXXXLDENGQEAVTENAHIVTKLLVGLVSYPHMMLVRETAIQCLVAMA 82
            DKD              D+NGQ AV ENAHI+   L  L+ YPHMM VRETA+QCL+A +
Sbjct: 1056 DKDKLYSLLLVLSGILTDKNGQVAVIENAHILVNCLTRLIDYPHMMFVRETALQCLIATS 1115

Query: 81   GLPHTRIYPMRTQVLEALLKAVDDPKR 1
             LP+ RI+PMRTQVL+A+ KA+DDPKR
Sbjct: 1116 ELPYARIFPMRTQVLQAICKALDDPKR 1142


>ref|XP_006343144.1| PREDICTED: MMS19 nucleotide excision repair protein homolog [Solanum
            tuberosum]
          Length = 1170

 Score =  102 bits (253), Expect = 7e-20
 Identities = 47/70 (67%), Positives = 60/70 (85%)
 Frame = -3

Query: 210  DENGQEAVTENAHIVTKLLVGLVSYPHMMLVRETAIQCLVAMAGLPHTRIYPMRTQVLEA 31
            D+NGQEA+ ENA +V + L+ L SYP++M++RETAIQCL AM+ LPH RIYPMRTQVL+A
Sbjct: 1078 DKNGQEAIIENAPMVIRRLIELTSYPYVMVIRETAIQCLGAMSELPHARIYPMRTQVLQA 1137

Query: 30   LLKAVDDPKR 1
            + KA+DDPKR
Sbjct: 1138 ITKALDDPKR 1147


>ref|XP_006853692.1| hypothetical protein AMTR_s00056p00136660 [Amborella trichopoda]
            gi|548857353|gb|ERN15159.1| hypothetical protein
            AMTR_s00056p00136660 [Amborella trichopoda]
          Length = 1160

 Score =  102 bits (253), Expect = 7e-20
 Identities = 49/70 (70%), Positives = 56/70 (80%)
 Frame = -3

Query: 210  DENGQEAVTENAHIVTKLLVGLVSYPHMMLVRETAIQCLVAMAGLPHTRIYPMRTQVLEA 31
            DE G+EAV ENAH +   L  LV+YPH+M+VRETAIQCLVAMA LPH RIYPMR QVLE 
Sbjct: 1068 DETGKEAVVENAHTIIGCLSKLVTYPHLMIVRETAIQCLVAMAALPHARIYPMRLQVLET 1127

Query: 30   LLKAVDDPKR 1
            + KA+DD KR
Sbjct: 1128 VSKALDDQKR 1137


>ref|XP_003597674.1| MMS19 nucleotide excision repair protein-like protein [Medicago
            truncatula] gi|355486722|gb|AES67925.1| MMS19 nucleotide
            excision repair protein-like protein [Medicago
            truncatula]
          Length = 1140

 Score =  102 bits (253), Expect = 7e-20
 Identities = 50/87 (57%), Positives = 60/87 (68%)
 Frame = -3

Query: 261  DKDXXXXXXXXXXXXXLDENGQEAVTENAHIVTKLLVGLVSYPHMMLVRETAIQCLVAMA 82
            DKD              ++NGQEAV ENAHI+   L+ LV YPH  LVRETAIQCLVA++
Sbjct: 1030 DKDILYGLLLVLSGMLTEKNGQEAVIENAHIIINGLIKLVDYPHKTLVRETAIQCLVALS 1089

Query: 81   GLPHTRIYPMRTQVLEALLKAVDDPKR 1
             LPH RIYP+RTQVL+A+ K +DD KR
Sbjct: 1090 ELPHVRIYPLRTQVLQAIFKCLDDTKR 1116