BLASTX nr result
ID: Cocculus22_contig00023121
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00023121
(536 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB97274.1| hypothetical protein L484_024135 [Morus notabilis] 139 3e-31
ref|XP_004235466.1| PREDICTED: pentatricopeptide repeat-containi... 139 4e-31
ref|XP_006347555.1| PREDICTED: pentatricopeptide repeat-containi... 134 1e-29
ref|XP_006347554.1| PREDICTED: pentatricopeptide repeat-containi... 134 1e-29
ref|XP_002519997.1| pentatricopeptide repeat-containing protein,... 134 1e-29
ref|XP_007029499.1| Pentatricopeptide repeat (PPR) superfamily p... 128 8e-28
ref|XP_004298102.1| PREDICTED: pentatricopeptide repeat-containi... 128 1e-27
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera] 128 1e-27
ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi... 127 1e-27
ref|XP_006491812.1| PREDICTED: pentatricopeptide repeat-containi... 117 1e-24
ref|XP_006491807.1| PREDICTED: pentatricopeptide repeat-containi... 117 1e-24
ref|XP_006590462.1| PREDICTED: pentatricopeptide repeat-containi... 112 7e-23
gb|EYU45362.1| hypothetical protein MIMGU_mgv1a022609mg [Mimulus... 109 4e-22
ref|XP_007157017.1| hypothetical protein PHAVU_002G036500g [Phas... 108 8e-22
ref|XP_006372940.1| hypothetical protein POPTR_0017s06420g [Popu... 107 2e-21
ref|XP_002309826.2| pentatricopeptide repeat-containing family p... 106 3e-21
ref|XP_006296830.1| hypothetical protein CARUB_v10012815mg [Caps... 104 2e-20
ref|XP_006406650.1| hypothetical protein EUTSA_v10019896mg [Eutr... 103 2e-20
ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata] g... 103 2e-20
ref|NP_188439.2| pentatricopeptide repeat-containing protein [Ar... 103 3e-20
>gb|EXB97274.1| hypothetical protein L484_024135 [Morus notabilis]
Length = 1494
Score = 139 bits (351), Expect = 3e-31
Identities = 75/135 (55%), Positives = 92/135 (68%)
Frame = -3
Query: 405 NSKKFSYSRACPTVRWRHLKPTEDSTQTHNIVSPPSVQVLVXXXXXXXXEDPNVSAREKL 226
N++KFSYSRA P+VRW +K +E Q+ P Q + + A
Sbjct: 72 NTQKFSYSRASPSVRWPDMKLSESYDQS------PQTQFTIVSPELTRDSESTEKADNL- 124
Query: 225 IEETLDSLDTNDETQEVLGRPSRTKMKKMNKLALKRAKDWRQRVQFLTDKIFQLQPDEFV 46
+LDSLD NDETQ+VLGRPSRT++KKMNKLALKRAKDWR+RV++LTD+I L+ DEFV
Sbjct: 125 --RSLDSLDENDETQQVLGRPSRTRVKKMNKLALKRAKDWRERVKYLTDRILGLKSDEFV 182
Query: 45 ADVLDSRPVQMTPTD 1
ADVLD R VQMTPTD
Sbjct: 183 ADVLDDRKVQMTPTD 197
>ref|XP_004235466.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Solanum lycopersicum]
Length = 1464
Score = 139 bits (350), Expect = 4e-31
Identities = 83/145 (57%), Positives = 97/145 (66%), Gaps = 8/145 (5%)
Frame = -3
Query: 411 ELNSKKFSYSRACPTVRWRHLKPTEDSTQTHNIVSPPSVQV-LVXXXXXXXXEDPNVSA- 238
++ KKF+Y+RA P+ RW HLK TE T ++ SP SV V D NV +
Sbjct: 51 DITPKKFTYTRASPSTRWPHLKFTE--THQNSQPSPLSVAAPSVKDKEFDSGSDGNVGSY 108
Query: 237 ----REKLIEETLD--SLDTNDETQEVLGRPSRTKMKKMNKLALKRAKDWRQRVQFLTDK 76
EK EE+LD +NDETQEVLGRPSRT+ KKM KLALKRAKDWRQRVQFLTDK
Sbjct: 109 EGRRMEKNGEESLDPNGFQSNDETQEVLGRPSRTRAKKMTKLALKRAKDWRQRVQFLTDK 168
Query: 75 IFQLQPDEFVADVLDSRPVQMTPTD 1
I L+ +EFVADVLD + VQMTPTD
Sbjct: 169 ILGLKSEEFVADVLDEKMVQMTPTD 193
>ref|XP_006347555.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X2 [Solanum tuberosum]
Length = 1277
Score = 134 bits (337), Expect = 1e-29
Identities = 82/140 (58%), Positives = 94/140 (67%), Gaps = 7/140 (5%)
Frame = -3
Query: 399 KKFSYSRACPTVRWRHLKPTEDSTQTHNIVSPPSVQV-LVXXXXXXXXEDPNVSARE--- 232
KKF+Y+RA P+ RW HLK T+ T + SP SV V V D NV E
Sbjct: 55 KKFTYTRASPSSRWPHLKFTD--THQSSQPSPLSVAVPSVKDVEFDSGSDGNVGCYEGRG 112
Query: 231 -KLIEETLDS--LDTNDETQEVLGRPSRTKMKKMNKLALKRAKDWRQRVQFLTDKIFQLQ 61
+ EE+L+S NDETQEVLGRPSRT+ KKM KLALKRAKDWRQRVQFLTDKI L+
Sbjct: 113 MEKGEESLNSNGFQLNDETQEVLGRPSRTRAKKMTKLALKRAKDWRQRVQFLTDKILGLK 172
Query: 60 PDEFVADVLDSRPVQMTPTD 1
+EFVADVLD + VQMTPTD
Sbjct: 173 SEEFVADVLDEKMVQMTPTD 192
>ref|XP_006347554.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 1476
Score = 134 bits (337), Expect = 1e-29
Identities = 82/140 (58%), Positives = 94/140 (67%), Gaps = 7/140 (5%)
Frame = -3
Query: 399 KKFSYSRACPTVRWRHLKPTEDSTQTHNIVSPPSVQV-LVXXXXXXXXEDPNVSARE--- 232
KKF+Y+RA P+ RW HLK T+ T + SP SV V V D NV E
Sbjct: 55 KKFTYTRASPSSRWPHLKFTD--THQSSQPSPLSVAVPSVKDVEFDSGSDGNVGCYEGRG 112
Query: 231 -KLIEETLDS--LDTNDETQEVLGRPSRTKMKKMNKLALKRAKDWRQRVQFLTDKIFQLQ 61
+ EE+L+S NDETQEVLGRPSRT+ KKM KLALKRAKDWRQRVQFLTDKI L+
Sbjct: 113 MEKGEESLNSNGFQLNDETQEVLGRPSRTRAKKMTKLALKRAKDWRQRVQFLTDKILGLK 172
Query: 60 PDEFVADVLDSRPVQMTPTD 1
+EFVADVLD + VQMTPTD
Sbjct: 173 SEEFVADVLDEKMVQMTPTD 192
>ref|XP_002519997.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540761|gb|EEF42321.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1429
Score = 134 bits (337), Expect = 1e-29
Identities = 74/138 (53%), Positives = 93/138 (67%), Gaps = 4/138 (2%)
Frame = -3
Query: 402 SKKFSYSRACPTVRWRHLKPTEDSTQTH---NIVSPPSVQVL-VXXXXXXXXEDPNVSAR 235
SKKFSYSRA P++RW HLK ++ T H +I SP Q + P + A
Sbjct: 14 SKKFSYSRASPSIRWPHLKLSDSCTSPHTQFHIASPSPTQFFDEMPESESDNKSPKLGA- 72
Query: 234 EKLIEETLDSLDTNDETQEVLGRPSRTKMKKMNKLALKRAKDWRQRVQFLTDKIFQLQPD 55
L+S++ +DE+QE LGR SRT++KKMNKLALKRAKDWR+RV+FLTD+I L+PD
Sbjct: 73 -------LESVEVDDESQERLGRLSRTRVKKMNKLALKRAKDWRERVKFLTDRILGLRPD 125
Query: 54 EFVADVLDSRPVQMTPTD 1
+FVADVLD VQMTPTD
Sbjct: 126 QFVADVLDDSKVQMTPTD 143
>ref|XP_007029499.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao] gi|508718104|gb|EOY10001.1| Pentatricopeptide
repeat (PPR) superfamily protein [Theobroma cacao]
Length = 1458
Score = 128 bits (322), Expect = 8e-28
Identities = 71/139 (51%), Positives = 88/139 (63%), Gaps = 4/139 (2%)
Frame = -3
Query: 405 NSKKFSYSRACPTVRWRHLK----PTEDSTQTHNIVSPPSVQVLVXXXXXXXXEDPNVSA 238
++ KFSY RA P+ RW HL+ T +QTH +PP + V
Sbjct: 51 SNNKFSYGRASPSERWPHLQLQLAETYPLSQTHFSATPPQLTHAVK------------EV 98
Query: 237 REKLIEETLDSLDTNDETQEVLGRPSRTKMKKMNKLALKRAKDWRQRVQFLTDKIFQLQP 58
L T +SL+ NDETQE LGR S+T++KKM KLALKRAKDWR+RV+FLTD+I L+
Sbjct: 99 ELSLESSTSESLEVNDETQEKLGRVSKTRVKKMTKLALKRAKDWRERVKFLTDRILGLEQ 158
Query: 57 DEFVADVLDSRPVQMTPTD 1
D+FVADVLD R VQMTPTD
Sbjct: 159 DQFVADVLDDRKVQMTPTD 177
>ref|XP_004298102.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1496
Score = 128 bits (321), Expect = 1e-27
Identities = 74/139 (53%), Positives = 88/139 (63%), Gaps = 4/139 (2%)
Frame = -3
Query: 405 NSKKFSYSRACPTVRWRHLKPTEDSTQTHNIVSPPSVQVLVXXXXXXXXEDPNVSAREKL 226
N+ KFSYSRA P+VRW HLK +E S P V+V + S ++
Sbjct: 65 NNNKFSYSRASPSVRWPHLKLSE------TYPSAPHTPVVVEDAGFSAQLSDSDSESKEE 118
Query: 225 IEETLDS----LDTNDETQEVLGRPSRTKMKKMNKLALKRAKDWRQRVQFLTDKIFQLQP 58
+ S LD NDETQ VLGRPS+TK KKM KLALKRAKDWR+RV+F +D+I L+
Sbjct: 119 DNGDVGSAALGLDKNDETQLVLGRPSKTKAKKMTKLALKRAKDWRERVRFYSDRILGLKS 178
Query: 57 DEFVADVLDSRPVQMTPTD 1
DEFVADVLD R VQMTPTD
Sbjct: 179 DEFVADVLDDRKVQMTPTD 197
>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 128 bits (321), Expect = 1e-27
Identities = 74/143 (51%), Positives = 93/143 (65%), Gaps = 5/143 (3%)
Frame = -3
Query: 414 EELNSKKFSYSRACPTVRWRHLKPTEDSTQTHNIVSPPSVQVLVXXXXXXXXEDPNVSAR 235
E+ N +KFSYSRA P+VRW HLK TE+ PPS + ED + S
Sbjct: 53 EQANLQKFSYSRASPSVRWPHLKLTENY--------PPSQRPTHVVEDVGLLEDTHDSLG 104
Query: 234 EKLIEETLDS-----LDTNDETQEVLGRPSRTKMKKMNKLALKRAKDWRQRVQFLTDKIF 70
++ I E ++ L+ DETQ+ LG+ S+ ++KKM KLALKRAKDWRQRVQFLTD+I
Sbjct: 105 KEEIREIGEAGFGEGLELGDETQDFLGKTSKNRVKKMTKLALKRAKDWRQRVQFLTDRIL 164
Query: 69 QLQPDEFVADVLDSRPVQMTPTD 1
L+ +EFVADVLD R VQMTPTD
Sbjct: 165 GLKSEEFVADVLDDRKVQMTPTD 187
>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 127 bits (320), Expect = 1e-27
Identities = 74/140 (52%), Positives = 92/140 (65%), Gaps = 5/140 (3%)
Frame = -3
Query: 405 NSKKFSYSRACPTVRWRHLKPTEDSTQTHNIVSPPSVQVLVXXXXXXXXEDPNVSAREKL 226
+SKKFSYSRA P+VRW HLK TE+ PPS + ED + S ++
Sbjct: 24 SSKKFSYSRASPSVRWPHLKLTENY--------PPSQRPTHVVEDVGLLEDTHDSLGKEE 75
Query: 225 IEETLDS-----LDTNDETQEVLGRPSRTKMKKMNKLALKRAKDWRQRVQFLTDKIFQLQ 61
I E ++ L+ DETQ+ LG+ S+ ++KKM KLALKRAKDWRQRVQFLTD+I L+
Sbjct: 76 IREIGEAGFGEGLELGDETQDFLGKTSKNRVKKMTKLALKRAKDWRQRVQFLTDRILGLK 135
Query: 60 PDEFVADVLDSRPVQMTPTD 1
+EFVADVLD R VQMTPTD
Sbjct: 136 SEEFVADVLDDRKVQMTPTD 155
>ref|XP_006491812.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X6 [Citrus sinensis]
Length = 1278
Score = 117 bits (294), Expect = 1e-24
Identities = 66/135 (48%), Positives = 83/135 (61%)
Frame = -3
Query: 405 NSKKFSYSRACPTVRWRHLKPTEDSTQTHNIVSPPSVQVLVXXXXXXXXEDPNVSAREKL 226
N+ FSYSRA P+VRW HLK E + PP Q P+ E
Sbjct: 54 NTHNFSYSRASPSVRWPHLKLNE-------LYPPPQTQFTHVGL-------PSELKSESQ 99
Query: 225 IEETLDSLDTNDETQEVLGRPSRTKMKKMNKLALKRAKDWRQRVQFLTDKIFQLQPDEFV 46
++++ +NDE+Q + R S+TK KKM KLALKRAKDWR+RV+FLTDKI L+ ++FV
Sbjct: 100 NVDSVEPFQSNDESQVAVERVSKTKAKKMTKLALKRAKDWRERVKFLTDKILGLRENQFV 159
Query: 45 ADVLDSRPVQMTPTD 1
ADVLD R VQMTPTD
Sbjct: 160 ADVLDERSVQMTPTD 174
>ref|XP_006491807.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X1 [Citrus sinensis]
gi|568877582|ref|XP_006491808.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X2 [Citrus sinensis]
gi|568877584|ref|XP_006491809.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X3 [Citrus sinensis]
gi|568877586|ref|XP_006491810.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X4 [Citrus sinensis]
gi|568877588|ref|XP_006491811.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like isoform X5 [Citrus sinensis]
Length = 1459
Score = 117 bits (294), Expect = 1e-24
Identities = 66/135 (48%), Positives = 83/135 (61%)
Frame = -3
Query: 405 NSKKFSYSRACPTVRWRHLKPTEDSTQTHNIVSPPSVQVLVXXXXXXXXEDPNVSAREKL 226
N+ FSYSRA P+VRW HLK E + PP Q P+ E
Sbjct: 54 NTHNFSYSRASPSVRWPHLKLNE-------LYPPPQTQFTHVGL-------PSELKSESQ 99
Query: 225 IEETLDSLDTNDETQEVLGRPSRTKMKKMNKLALKRAKDWRQRVQFLTDKIFQLQPDEFV 46
++++ +NDE+Q + R S+TK KKM KLALKRAKDWR+RV+FLTDKI L+ ++FV
Sbjct: 100 NVDSVEPFQSNDESQVAVERVSKTKAKKMTKLALKRAKDWRERVKFLTDKILGLRENQFV 159
Query: 45 ADVLDSRPVQMTPTD 1
ADVLD R VQMTPTD
Sbjct: 160 ADVLDERSVQMTPTD 174
>ref|XP_006590462.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1487
Score = 112 bits (279), Expect = 7e-23
Identities = 66/144 (45%), Positives = 87/144 (60%), Gaps = 5/144 (3%)
Frame = -3
Query: 417 PEELNSKKFSYSRACPTVRWRHLK--PTEDSTQTH---NIVSPPSVQVLVXXXXXXXXED 253
P + KF Y+RA P++RW HLK T STQ H N + P
Sbjct: 53 PNTVKPVKFIYTRASPSIRWPHLKLSQTYPSTQPHFPQNDIFPSKTP------------- 99
Query: 252 PNVSAREKLIEETLDSLDTNDETQEVLGRPSRTKMKKMNKLALKRAKDWRQRVQFLTDKI 73
P+ S E+ + ++ D +DE QE LGR S+T++KKMNKLALKR K+WR+RV++LTD I
Sbjct: 100 PSESPEEESPKPVVND-DDDDEAQEALGRRSKTRVKKMNKLALKRDKNWRERVKYLTDTI 158
Query: 72 FQLQPDEFVADVLDSRPVQMTPTD 1
L+ +EFVA VL+ R VQMTPTD
Sbjct: 159 LALKSEEFVAGVLEERRVQMTPTD 182
>gb|EYU45362.1| hypothetical protein MIMGU_mgv1a022609mg [Mimulus guttatus]
Length = 1479
Score = 109 bits (273), Expect = 4e-22
Identities = 66/138 (47%), Positives = 82/138 (59%)
Frame = -3
Query: 414 EELNSKKFSYSRACPTVRWRHLKPTEDSTQTHNIVSPPSVQVLVXXXXXXXXEDPNVSAR 235
E+ ++KF+YSRA P RW HLK ST+T ++ V V ED VS
Sbjct: 40 EQGTARKFTYSRASPAARWPHLK----STETQHVSQKKMVYSEVKDEIEEVSEDGAVSVD 95
Query: 234 EKLIEETLDSLDTNDETQEVLGRPSRTKMKKMNKLALKRAKDWRQRVQFLTDKIFQLQPD 55
+E+ L R SR K+KKM+KLALKRAKDWRQRVQF+TD+I L+ +
Sbjct: 96 ADGVEDKLFDK-----------RLSRNKVKKMSKLALKRAKDWRQRVQFITDRILNLKSE 144
Query: 54 EFVADVLDSRPVQMTPTD 1
EFVADVLD + VQMTPTD
Sbjct: 145 EFVADVLDEKMVQMTPTD 162
>ref|XP_007157017.1| hypothetical protein PHAVU_002G036500g [Phaseolus vulgaris]
gi|561030432|gb|ESW29011.1| hypothetical protein
PHAVU_002G036500g [Phaseolus vulgaris]
Length = 1484
Score = 108 bits (270), Expect = 8e-22
Identities = 62/139 (44%), Positives = 82/139 (58%)
Frame = -3
Query: 417 PEELNSKKFSYSRACPTVRWRHLKPTEDSTQTHNIVSPPSVQVLVXXXXXXXXEDPNVSA 238
P + + KF Y+RA P++RW HLK +E TH + + P +
Sbjct: 51 PNAVKTVKFVYARASPSIRWPHLKLSETHYSTHTQLPQDDI--------FPAKTQPFDTP 102
Query: 237 REKLIEETLDSLDTNDETQEVLGRPSRTKMKKMNKLALKRAKDWRQRVQFLTDKIFQLQP 58
E +D D DE QE LGR S+T++KKMNKLALKR K+WR+RV++LTD I L+
Sbjct: 103 EEPPKPGRIDVND--DEGQEALGRRSKTRVKKMNKLALKRDKNWRERVKYLTDTILALKS 160
Query: 57 DEFVADVLDSRPVQMTPTD 1
+EFVA VL+ R VQMTPTD
Sbjct: 161 EEFVAGVLEERRVQMTPTD 179
>ref|XP_006372940.1| hypothetical protein POPTR_0017s06420g [Populus trichocarpa]
gi|566211778|ref|XP_006372941.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
gi|550319588|gb|ERP50737.1| hypothetical protein
POPTR_0017s06420g [Populus trichocarpa]
gi|550319589|gb|ERP50738.1| pentatricopeptide
repeat-containing family protein [Populus trichocarpa]
Length = 1465
Score = 107 bits (266), Expect = 2e-21
Identities = 59/138 (42%), Positives = 84/138 (60%), Gaps = 5/138 (3%)
Frame = -3
Query: 399 KKFSYSRACPTVRWRHLKPTE-----DSTQTHNIVSPPSVQVLVXXXXXXXXEDPNVSAR 235
+KFSYSRA P+VRW LK E TQ+ + ++ +D +
Sbjct: 56 QKFSYSRASPSVRWPQLKLNETYYPSSQTQSTEMSKDGNLNHSSHNQLAEMSKDGILGVG 115
Query: 234 EKLIEETLDSLDTNDETQEVLGRPSRTKMKKMNKLALKRAKDWRQRVQFLTDKIFQLQPD 55
+ + +D D +E +++ R SRT++KKMNKLAL++AKDWR+RV++ TD+I L+ D
Sbjct: 116 SPELNDDVDVDDDGNEEEKLGWRQSRTRVKKMNKLALRKAKDWRERVKYFTDRILGLKQD 175
Query: 54 EFVADVLDSRPVQMTPTD 1
+FVADVLD R VQMTPTD
Sbjct: 176 QFVADVLDDRKVQMTPTD 193
>ref|XP_002309826.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550333963|gb|EEE90276.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 1484
Score = 106 bits (265), Expect = 3e-21
Identities = 69/146 (47%), Positives = 88/146 (60%), Gaps = 13/146 (8%)
Frame = -3
Query: 399 KKFSYSRACPTVRWRHLKPTEDSTQTHNIVSPPSVQVLVXXXXXXXXEDPNVSAREKLIE 220
+KFSYSRA P+VRW LK E T++ S P Q N S+ ++L E
Sbjct: 56 QKFSYSRASPSVRWPQLKLNE----TYH--SSPQTQFTEMSKDGIL----NHSSLDQLTE 105
Query: 219 ETLDSL-----------DTNDETQE--VLGRPSRTKMKKMNKLALKRAKDWRQRVQFLTD 79
+ D + D +D +QE + R SRT++KKMNKLALKRAKDWR+RV++LTD
Sbjct: 106 MSKDEILDVGSFELSDDDDDDGSQEEKLRWRKSRTRVKKMNKLALKRAKDWRERVKYLTD 165
Query: 78 KIFQLQPDEFVADVLDSRPVQMTPTD 1
+I L D+FVADVLD R VQMTPTD
Sbjct: 166 RILGLTQDQFVADVLDDRKVQMTPTD 191
>ref|XP_006296830.1| hypothetical protein CARUB_v10012815mg [Capsella rubella]
gi|482565539|gb|EOA29728.1| hypothetical protein
CARUB_v10012815mg [Capsella rubella]
Length = 1448
Score = 104 bits (259), Expect = 2e-20
Identities = 62/137 (45%), Positives = 82/137 (59%), Gaps = 2/137 (1%)
Frame = -3
Query: 405 NSKKFSYSRACPTVRWRHL--KPTEDSTQTHNIVSPPSVQVLVXXXXXXXXEDPNVSARE 232
+++KF+YSRA P VRW HL + T DS S PS V + P+
Sbjct: 37 STQKFTYSRASPAVRWPHLNLRETYDSR-----TSTPSQPVSSPLSSTDVSDIPDSGEVV 91
Query: 231 KLIEETLDSLDTNDETQEVLGRPSRTKMKKMNKLALKRAKDWRQRVQFLTDKIFQLQPDE 52
I + DE V R R ++KK+NK+AL +AKDWR+RV+FLTDKI L+P++
Sbjct: 92 DSIGASAQQKTKGDEAAIVASR--RRRVKKLNKVALIKAKDWRERVKFLTDKILSLKPNQ 149
Query: 51 FVADVLDSRPVQMTPTD 1
FVAD+LD+RPVQMTPTD
Sbjct: 150 FVADILDARPVQMTPTD 166
>ref|XP_006406650.1| hypothetical protein EUTSA_v10019896mg [Eutrema salsugineum]
gi|557107796|gb|ESQ48103.1| hypothetical protein
EUTSA_v10019896mg [Eutrema salsugineum]
Length = 1455
Score = 103 bits (258), Expect = 2e-20
Identities = 64/142 (45%), Positives = 88/142 (61%), Gaps = 7/142 (4%)
Frame = -3
Query: 405 NSKKFSYSRACPTVRWRHL--KPTEDS--TQTHNIVSPPSVQVLVXXXXXXXXEDPNVSA 238
+++KFSYSRA P VRW HL + T DS + VSPP+ P A
Sbjct: 48 SAQKFSYSRASPAVRWPHLNLRETYDSRGSTPSRPVSPPA--------------SPTDVA 93
Query: 237 REKLIEETLDSLDTNDE---TQEVLGRPSRTKMKKMNKLALKRAKDWRQRVQFLTDKIFQ 67
+ E +DS+ ++++ +E R ++KKMNK+AL RAKDWR+RV+FLTDKI
Sbjct: 94 EDS--GEFVDSVSSSEQQKANEEAAVASRRRRVKKMNKVALIRAKDWRERVKFLTDKILG 151
Query: 66 LQPDEFVADVLDSRPVQMTPTD 1
L+P++FVAD+LD+R VQMTPTD
Sbjct: 152 LKPNQFVADILDARLVQMTPTD 173
>ref|XP_002885239.1| EMB1270 [Arabidopsis lyrata subsp. lyrata]
gi|297331079|gb|EFH61498.1| EMB1270 [Arabidopsis lyrata
subsp. lyrata]
Length = 1429
Score = 103 bits (258), Expect = 2e-20
Identities = 59/140 (42%), Positives = 81/140 (57%), Gaps = 5/140 (3%)
Frame = -3
Query: 405 NSKKFSYSRACPTVRWRHLKPTED-----STQTHNIVSPPSVQVLVXXXXXXXXEDPNVS 241
+++KF+YSRA P VRW HL E ST + + SP S P +
Sbjct: 34 STQKFTYSRASPAVRWPHLSLRETYDSRASTPSQPLSSPVS---------------PTDT 78
Query: 240 AREKLIEETLDSLDTNDETQEVLGRPSRTKMKKMNKLALKRAKDWRQRVQFLTDKIFQLQ 61
+++ S + E R ++KKMNK+AL +AKDWR+RV+FLTDKI L+
Sbjct: 79 PDSAEFVDSIGSSEHQKTKDETAVASRRRRVKKMNKVALIKAKDWRERVKFLTDKILSLK 138
Query: 60 PDEFVADVLDSRPVQMTPTD 1
P++FVAD+LD+RPVQMTPTD
Sbjct: 139 PNQFVADILDARPVQMTPTD 158
>ref|NP_188439.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|322510063|sp|Q5G1S8.2|PP241_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g18110, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 1270; Flags: Precursor
gi|9294066|dbj|BAB02023.1| unnamed protein product
[Arabidopsis thaliana] gi|332642528|gb|AEE76049.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 1440
Score = 103 bits (256), Expect = 3e-20
Identities = 63/137 (45%), Positives = 81/137 (59%), Gaps = 2/137 (1%)
Frame = -3
Query: 405 NSKKFSYSRACPTVRWRHLKPTE--DSTQTHNIVSPPSVQVLVXXXXXXXXEDPNVSARE 232
+S+KF+YSRA P VRW HL E DST + + SP V + D S E
Sbjct: 36 SSQKFTYSRASPAVRWPHLNLREIYDSTPSQTLSSP--VSPIAGTPDSGDVVDSIASREE 93
Query: 231 KLIEETLDSLDTNDETQEVLGRPSRTKMKKMNKLALKRAKDWRQRVQFLTDKIFQLQPDE 52
+ T DET R ++KKMNK+AL +AKDWR+RV+FLTDKI L+ ++
Sbjct: 94 Q---------KTKDETAVAT---RRRRVKKMNKVALIKAKDWRERVKFLTDKILSLKSNQ 141
Query: 51 FVADVLDSRPVQMTPTD 1
FVAD+LD+R VQMTPTD
Sbjct: 142 FVADILDARLVQMTPTD 158