BLASTX nr result
ID: Cocculus22_contig00023094
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00023094
(413 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|WP_019712193.1| hypothetical protein [Bacillus subtilis] 164 5e-55
ref|XP_003094876.1| hypothetical protein CRE_01315 [Caenorhabdit... 181 7e-44
ref|WP_006573365.1| hypothetical protein [Pseudoflavonifractor c... 179 5e-43
gb|AFY24244.1| hypothetical protein [Shuttle vector pKV12] 171 1e-40
ref|NP_040359.1| 10.2 kd ORF [Escherichia coli] gi|499192326|ref... 122 3e-28
ref|XP_003092465.1| hypothetical protein CRE_30201 [Caenorhabdit... 122 5e-26
pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimurium ... 97 2e-18
ref|WP_021538330.1| hypothetical protein, partial [Escherichia c... 97 3e-18
ref|WP_000328809.1| hypothetical protein, partial [Escherichia c... 95 1e-17
ref|WP_005421809.1| hypothetical protein [[Ruminococcus] obeum] ... 94 2e-17
ref|WP_001750129.1| hypothetical protein [Escherichia coli] gi|4... 92 8e-17
ref|YP_005712190.1| hypothetical protein [Shigella flexneri 2002... 91 1e-16
ref|YP_006953589.1| hypothetical protein [Escherichia coli] gi|5... 91 2e-16
gb|ETS26555.1| replication initiation protein, partial [Escheric... 91 2e-16
ref|WP_001318239.1| conserved hypothetical protein [Escherichia ... 91 2e-16
ref|YP_008378215.1| hypothetical protein [Shigella flexneri] gi|... 90 4e-16
ref|YP_001456645.1| hypothetical protein CKO_pCKO2p07169 [Citrob... 89 5e-16
ref|WP_016230892.1| hypothetical protein, partial [Escherichia c... 89 6e-16
ref|WP_021534638.1| hypothetical protein, partial [Escherichia c... 88 1e-15
ref|WP_001314450.1| conserved hypothetical protein [Escherichia ... 88 1e-15
>ref|WP_019712193.1| hypothetical protein [Bacillus subtilis]
Length = 115
Score = 164 bits (415), Expect(2) = 5e-55
Identities = 76/81 (93%), Positives = 78/81 (96%)
Frame = +3
Query: 18 VHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRARYVGGATEFLKWWPNYGY 197
+HEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRARYVGGATEFLKWWPNYGY
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRARYVGGATEFLKWWPNYGY 60
Query: 198 TRRTVFGICALLKPVTFGKRV 260
TRRTVFGICALLKPVT K +
Sbjct: 61 TRRTVFGICALLKPVTSEKEL 81
Score = 76.3 bits (186), Expect(2) = 5e-55
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = +1
Query: 247 SEKELVALDPANKPPLVAVVFLFASSRLRAEKKDLKKIL 363
SEKELVALDPANKPPLVAVVFLFASSRLRAEKKDLKKIL
Sbjct: 77 SEKELVALDPANKPPLVAVVFLFASSRLRAEKKDLKKIL 115
>ref|XP_003094876.1| hypothetical protein CRE_01315 [Caenorhabditis remanei]
gi|493621169|ref|WP_006573366.1| hypothetical protein
[Pseudoflavonifractor capillosus]
gi|150272104|gb|EDM99319.1| hypothetical protein
BACCAP_02838 [Pseudoflavonifractor capillosus ATCC
29799] gi|308246440|gb|EFO90392.1| hypothetical protein
CRE_01315 [Caenorhabditis remanei]
Length = 96
Score = 181 bits (460), Expect = 7e-44
Identities = 88/88 (100%), Positives = 88/88 (100%)
Frame = -1
Query: 365 QRIFLRSFFSARNLLLANKKTTATSGGLFAGSRATNSFSEGNWLQQSADTKYCSSSVAVV 186
QRIFLRSFFSARNLLLANKKTTATSGGLFAGSRATNSFSEGNWLQQSADTKYCSSSVAVV
Sbjct: 9 QRIFLRSFFSARNLLLANKKTTATSGGLFAGSRATNSFSEGNWLQQSADTKYCSSSVAVV 68
Query: 185 RPPLQELCSTAYIPRSANPVTSGCCQWR 102
RPPLQELCSTAYIPRSANPVTSGCCQWR
Sbjct: 69 RPPLQELCSTAYIPRSANPVTSGCCQWR 96
>ref|WP_006573365.1| hypothetical protein [Pseudoflavonifractor capillosus]
gi|141221|sp|P03851.1|YPB3_ECOLX RecName:
Full=Uncharacterized 9.4 kDa protein
gi|150272103|gb|EDM99318.1| hypothetical protein
BACCAP_02836 [Pseudoflavonifractor capillosus ATCC
29799] gi|576095868|gb|AHH11876.1| hypothetical protein
BCO_0900154 [Borrelia coriaceae Co53]
Length = 84
Score = 179 bits (453), Expect = 5e-43
Identities = 83/84 (98%), Positives = 84/84 (100%)
Frame = +3
Query: 18 VHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRARYVGGATEFLKWWPNYGY 197
+HEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRARYVGGATEFLKWWPNYGY
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRARYVGGATEFLKWWPNYGY 60
Query: 198 TRRTVFGICALLKPVTFGKRVGSS 269
TRRTVFGICALLKPVTFGKRVGSS
Sbjct: 61 TRRTVFGICALLKPVTFGKRVGSS 84
>gb|AFY24244.1| hypothetical protein [Shuttle vector pKV12]
Length = 84
Score = 171 bits (433), Expect = 1e-40
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = -1
Query: 353 LRSFFSARNLLLANKKTTATSGGLFAGSRATNSFSEGNWLQQSADTKYCSSSVAVVRPPL 174
+RSFFSARNLLLANKKTTATSGGLFAGSRATNSFSEGNWLQQSADTKYC SSVAVVRPPL
Sbjct: 1 MRSFFSARNLLLANKKTTATSGGLFAGSRATNSFSEGNWLQQSADTKYCPSSVAVVRPPL 60
Query: 173 QELCSTAYIPRSANPVTSGCCQWR 102
QELCSTAYIPRSANPVTSGCCQWR
Sbjct: 61 QELCSTAYIPRSANPVTSGCCQWR 84
>ref|NP_040359.1| 10.2 kd ORF [Escherichia coli] gi|499192326|ref|WP_010889866.1|
10.2 kd ORF [Escherichia coli] gi|455142|gb|AAB59124.1|
10.2 kd ORF [Escherichia coli]
gi|115291313|gb|ABI93155.1| hypothetical protein
[Cloning vector pOri1] gi|115291319|gb|ABI93160.1|
hypothetical protein [Cloning vector pCW]
gi|115291325|gb|ABI93165.1| hypothetical protein
[Cloning vector pCW1] gi|115291331|gb|ABI93170.1|
hypothetical protein [Cloning vector pCW2]
Length = 96
Score = 122 bits (307), Expect(2) = 3e-28
Identities = 61/66 (92%), Positives = 63/66 (95%)
Frame = -1
Query: 353 LRSFFSARNLLLANKKTTATSGGLFAGSRATNSFSEGNWLQQSADTKYCSSSVAVVRPPL 174
+RSFFSARNLLLANKKTTAT+GGLFAGSRATNSFSEGNWLQQSADTKYC SSVAVV P L
Sbjct: 1 MRSFFSARNLLLANKKTTATNGGLFAGSRATNSFSEGNWLQQSADTKYCPSSVAVVGPLL 60
Query: 173 QELCST 156
QELCST
Sbjct: 61 QELCST 66
Score = 28.1 bits (61), Expect(2) = 3e-28
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -2
Query: 109 SGDKSCLTGLDSRR 68
SG K+CLTGLDSRR
Sbjct: 83 SGVKACLTGLDSRR 96
>ref|XP_003092465.1| hypothetical protein CRE_30201 [Caenorhabditis remanei]
gi|308253200|gb|EFO97152.1| hypothetical protein
CRE_30201 [Caenorhabditis remanei]
Length = 75
Score = 122 bits (306), Expect = 5e-26
Identities = 62/67 (92%), Positives = 63/67 (94%)
Frame = -1
Query: 365 QRIFLRSFFSARNLLLANKKTTATSGGLFAGSRATNSFSEGNWLQQSADTKYCSSSVAVV 186
QRIFLRSFFSARNLLLANKKTTATSGGLFAGSRATNSFSEGNWLQQSADTKYCSSSVAVV
Sbjct: 9 QRIFLRSFFSARNLLLANKKTTATSGGLFAGSRATNSFSEGNWLQQSADTKYCSSSVAVV 68
Query: 185 RPPLQEL 165
P + L
Sbjct: 69 GPHFRTL 75
>pir||JQ1541 hypothetical 16.9K protein - Salmonella typhimurium plasmid NTP16
Length = 149
Score = 97.4 bits (241), Expect = 2e-18
Identities = 44/47 (93%), Positives = 44/47 (93%)
Frame = +1
Query: 1 APSWAVCTNPPFSPTAAPYPVTIVLSPTR*DTTYRHWQQPLVTGLAE 141
APSWAVCTNPPFSPTAAPYPVTIVLSPTR DTTYRHWQQPLVT L E
Sbjct: 95 APSWAVCTNPPFSPTAAPYPVTIVLSPTRXDTTYRHWQQPLVTDLEE 141
>ref|WP_021538330.1| hypothetical protein, partial [Escherichia coli]
gi|535172765|gb|EQT17338.1| hypothetical protein
G830_04629, partial [Escherichia coli HVH 176
(4-3428664)]
Length = 59
Score = 96.7 bits (239), Expect = 3e-18
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = +3
Query: 3 SKLGCVHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRA 143
SKLGCVHEPPVQPDRCALSGNYRLESNPVRH L+PLAAATGNRISRA
Sbjct: 3 SKLGCVHEPPVQPDRCALSGNYRLESNPVRHALTPLAAATGNRISRA 49
>ref|WP_000328809.1| hypothetical protein, partial [Escherichia coli]
gi|340730481|gb|EGR59810.1| hypothetical protein
HUSEC41_28817 [Escherichia coli O104:H4 str. 01-09591]
Length = 64
Score = 94.7 bits (234), Expect = 1e-17
Identities = 43/47 (91%), Positives = 45/47 (95%)
Frame = +3
Query: 3 SKLGCVHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRA 143
SKLGCVHEPPVQPDRCALSGNYRLESNPVRHDL+PLAAA GN +SRA
Sbjct: 8 SKLGCVHEPPVQPDRCALSGNYRLESNPVRHDLAPLAAAVGNLVSRA 54
>ref|WP_005421809.1| hypothetical protein [[Ruminococcus] obeum]
gi|149830132|gb|EDM85226.1| hypothetical protein
RUMOBE_04210 [Ruminococcus obeum ATCC 29174]
Length = 53
Score = 94.4 bits (233), Expect = 2e-17
Identities = 47/51 (92%), Positives = 48/51 (94%)
Frame = -1
Query: 353 LRSFFSARNLLLANKKTTATSGGLFAGSRATNSFSEGNWLQQSADTKYCSS 201
+RSFFSARNLLLANKKTTATSGGLFAGSRATNSFSEGNWLQQSADT SS
Sbjct: 1 MRSFFSARNLLLANKKTTATSGGLFAGSRATNSFSEGNWLQQSADTNTVSS 51
>ref|WP_001750129.1| hypothetical protein [Escherichia coli] gi|476721246|gb|ENA26134.1|
hypothetical protein ECP02989421_5334 [Escherichia coli
P0298942.1]
Length = 175
Score = 92.0 bits (227), Expect = 8e-17
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -3
Query: 126 YQWLLPVAISRVLPGWTQDDSYRIRRSGRAERGVRAHSPAWS 1
YQWLLPVA+SRVLPGWTQDDSYRIRRSGRAERGVRAHSPAWS
Sbjct: 5 YQWLLPVALSRVLPGWTQDDSYRIRRSGRAERGVRAHSPAWS 46
>ref|YP_005712190.1| hypothetical protein [Shigella flexneri 2002017]
gi|504339470|ref|WP_014526572.1| hypothetical protein
[Shigella flexneri] gi|281604054|gb|ADA77036.1|
hypothetical protein SFxv_5141 [Shigella flexneri
2002017]
Length = 105
Score = 91.3 bits (225), Expect = 1e-16
Identities = 52/94 (55%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Frame = +3
Query: 90 RHDLSPLAAATGNRISRARYVGGATEFLKWWPNYGYTRRTVFGICALLKPVTFGKRVGSS 269
RH PL R++ VGGA EFLKWWPNYGYT RTVFGICALLKPVT R+ SS
Sbjct: 11 RHWQQPLVTGLAERVN----VGGAIEFLKWWPNYGYTGRTVFGICALLKPVT---RLSSS 63
Query: 270 *SGK--QTTAGSGGFFVCKQQITRRKKGSQEDPL 365
+ + F +Q+ITRRKKG+QEDPL
Sbjct: 64 PTDLTFEKPPPQVVFSFSEQEITRRKKGTQEDPL 97
>ref|YP_006953589.1| hypothetical protein [Escherichia coli]
gi|504871937|ref|WP_015059039.1| hypothetical protein
[Escherichia coli] gi|355469722|gb|AER93371.1|
hypothetical protein [Escherichia coli]
Length = 144
Score = 90.9 bits (224), Expect = 2e-16
Identities = 41/44 (93%), Positives = 41/44 (93%)
Frame = +1
Query: 1 APSWAVCTNPPFSPTAAPYPVTIVLSPTR*DTTYRHWQQPLVTG 132
APSWAVCTNPPFSPTAAPYPVTI LSPTR DTT RHWQQPLVTG
Sbjct: 95 APSWAVCTNPPFSPTAAPYPVTINLSPTRKDTTKRHWQQPLVTG 138
>gb|ETS26555.1| replication initiation protein, partial [Escherichia coli
O6:H16:CFA/II str. B2C]
Length = 58
Score = 90.5 bits (223), Expect = 2e-16
Identities = 44/61 (72%), Positives = 47/61 (77%)
Frame = +3
Query: 3 SKLGCVHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRARYVGGATEFLKWW 182
SKLGCVHEPPVQPDRCALSGNY+LESNP RHD +PLAAA G + R Y EFLKW
Sbjct: 2 SKLGCVHEPPVQPDRCALSGNYQLESNPERHDKTPLAAAIGKQDVREMY----REFLKWC 57
Query: 183 P 185
P
Sbjct: 58 P 58
>ref|WP_001318239.1| conserved hypothetical protein [Escherichia coli]
gi|331076787|gb|EGI48009.1| conserved hypothetical
protein [Escherichia coli H299]
Length = 55
Score = 90.5 bits (223), Expect = 2e-16
Identities = 40/45 (88%), Positives = 43/45 (95%)
Frame = +3
Query: 9 LGCVHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRA 143
+GCVHEPPVQPDRCALSGNYRLESNPVRHDL+PLAAA GN +SRA
Sbjct: 1 MGCVHEPPVQPDRCALSGNYRLESNPVRHDLAPLAAAVGNLVSRA 45
>ref|YP_008378215.1| hypothetical protein [Shigella flexneri]
gi|529178235|ref|WP_020936659.1| hypothetical protein
[Shigella flexneri] gi|507145055|gb|AGM38239.1|
hypothetical protein [Shigella flexneri]
Length = 105
Score = 89.7 bits (221), Expect = 4e-16
Identities = 51/93 (54%), Positives = 59/93 (63%), Gaps = 2/93 (2%)
Frame = +3
Query: 90 RHDLSPLAAATGNRISRARYVGGATEFLKWWPNYGYTRRTVFGICALLKPVTFGKRVGSS 269
RH PL R++ VGGA EFLKWWPNYGYT RTVFGICALLKPVT R+ SS
Sbjct: 11 RHWQQPLVTGLAERVN----VGGAIEFLKWWPNYGYTGRTVFGICALLKPVT---RLSSS 63
Query: 270 *SGK--QTTAGSGGFFVCKQQITRRKKGSQEDP 362
+ + F +Q+ITRRKKG+QEDP
Sbjct: 64 PTDLTFEKPPPQVVFSFSEQEITRRKKGTQEDP 96
>ref|YP_001456645.1| hypothetical protein CKO_pCKO2p07169 [Citrobacter koseri ATCC
BAA-895] gi|500821251|ref|WP_012000845.1| hypothetical
protein [Citrobacter koseri] gi|157086534|gb|ABV16210.1|
hypothetical protein CKO_pCKO2p07169 [Citrobacter koseri
ATCC BAA-895]
Length = 78
Score = 89.4 bits (220), Expect = 5e-16
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = +1
Query: 1 APSWAVCTNPPFSPTAAPYPVTIVLSPTR*DTTYRHWQQPLVTG 132
APSWAVCTNPPFSPTAAP+PVTI+LSPTR DT RHWQQPLVTG
Sbjct: 29 APSWAVCTNPPFSPTAAPFPVTIILSPTRTDTQKRHWQQPLVTG 72
>ref|WP_016230892.1| hypothetical protein, partial [Escherichia coli]
gi|508266178|gb|EOU39433.1| hypothetical protein
WC3_04836, partial [Escherichia coli KTE35]
gi|508312953|gb|EOU85148.1| hypothetical protein
WEY_04828, partial [Escherichia coli KTE34]
gi|508341562|gb|EOV13274.1| hypothetical protein
A157_05082, partial [Escherichia coli KTE198]
Length = 59
Score = 89.0 bits (219), Expect = 6e-16
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = +3
Query: 3 SKLGCVHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGN 128
SKLGCVHEPPVQPDRCALSGNYRLESNPVRHD +PLAAATGN
Sbjct: 3 SKLGCVHEPPVQPDRCALSGNYRLESNPVRHDKAPLAAATGN 44
>ref|WP_021534638.1| hypothetical protein, partial [Escherichia coli]
gi|535085788|gb|EQS32246.1| hypothetical protein
G807_04544, partial [Escherichia coli HVH 149
(4-4451880)]
Length = 50
Score = 87.8 bits (216), Expect = 1e-15
Identities = 39/43 (90%), Positives = 41/43 (95%)
Frame = +3
Query: 3 SKLGCVHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNR 131
SKLGCVHEPPVQPDRCALSGNYRLESNPVRHDL+PLA ATG +
Sbjct: 3 SKLGCVHEPPVQPDRCALSGNYRLESNPVRHDLTPLATATGKQ 45
>ref|WP_001314450.1| conserved hypothetical protein [Escherichia coli]
gi|331051576|gb|EGI23618.1| conserved hypothetical
protein [Escherichia coli TA206]
Length = 52
Score = 87.8 bits (216), Expect = 1e-15
Identities = 40/42 (95%), Positives = 42/42 (100%)
Frame = +3
Query: 18 VHEPPVQPDRCALSGNYRLESNPVRHDLSPLAAATGNRISRA 143
+HEPPVQPDRCALSGNYRLESNPVRHDL+PLAAATGNRISRA
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVRHDLTPLAAATGNRISRA 42