BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00022885
         (649 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containi...   303   3e-80
emb|CBI26347.3| unnamed protein product [Vitis vinifera]              303   3e-80
ref|XP_007227046.1| hypothetical protein PRUPE_ppa001385mg [Prun...   297   2e-78
ref|XP_006378364.1| hypothetical protein POPTR_0010s08940g [Popu...   295   1e-77
ref|XP_004496078.1| PREDICTED: pentatricopeptide repeat-containi...   293   2e-77
gb|EXB44177.1| hypothetical protein L484_010283 [Morus notabilis]     291   1e-76
ref|XP_007034933.1| Tetratricopeptide repeat (TPR)-like superfam...   291   1e-76
ref|XP_006362174.1| PREDICTED: pentatricopeptide repeat-containi...   291   2e-76
ref|XP_004247685.1| PREDICTED: pentatricopeptide repeat-containi...   290   2e-76
ref|XP_002517032.1| pentatricopeptide repeat-containing protein,...   290   3e-76
ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   285   1e-74
ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containi...   285   1e-74
ref|XP_006489493.1| PREDICTED: pentatricopeptide repeat-containi...   284   1e-74
ref|XP_004297989.1| PREDICTED: pentatricopeptide repeat-containi...   284   2e-74
ref|NP_188942.1| pentatricopeptide repeat-containing protein [Ar...   283   2e-74
ref|XP_006420082.1| hypothetical protein CICLE_v10004292mg [Citr...   283   3e-74
ref|XP_007148598.1| hypothetical protein PHAVU_006G222000g [Phas...   280   3e-73
ref|XP_007148597.1| hypothetical protein PHAVU_006G222000g [Phas...   280   3e-73
ref|XP_006300104.1| hypothetical protein CARUB_v10016333mg [Caps...   278   1e-72
ref|XP_002885540.1| pentatricopeptide repeat-containing protein ...   275   7e-72

>ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
            [Vitis vinifera]
          Length = 881

 Score =  303 bits (776), Expect = 3e-80
 Identities = 146/216 (67%), Positives = 184/216 (85%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S++IKLGQLE+AEGLFKEMI   VQPD+VV+G+LINA+ADVG++ +A+ YVN +RNAG  
Sbjct: 611  SSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLP 670

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEEL 361
             N+VIYNSLIKLYTKVGYL+EAQE YK+LQ+SE GP+VYSSNCMIDLYSER++V+QAEE+
Sbjct: 671  MNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEVGPDVYSSNCMIDLYSERSMVKQAEEI 730

Query: 362  FDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASD 541
            F+ L+ +G ANEFS+AMMLCMYKRIG+  +A  I +KM EL L+TD LS+NNV+  YA D
Sbjct: 731  FESLKRKGDANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMD 790

Query: 542  GRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            GR K+A+ TFK+MI +++QPDD TFK LG VLV+ G
Sbjct: 791  GRFKDAVGTFKEMIEAAIQPDDCTFKSLGVVLVKCG 826



 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 36/244 (14%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S + K   ++ A   FK+M E  ++PD+V +  L+ A++    + +A I V+EM   G  
Sbjct: 403  SLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFSIRHLVGEAEILVSEMDERGLE 462

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQ-SSEAGPEVYSSNCMIDLYSERALVRQAE- 355
             +    ++L ++Y + G LK++   ++          E YS+N  ID Y ER  + +AE 
Sbjct: 463  IDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEGNMSSECYSAN--IDAYGERGHILEAEK 520

Query: 356  ---------------------------------ELFDDLRHRGT-ANEFSYAMMLCMYKR 433
                                             +L D + + G   ++FSY  ++ +   
Sbjct: 521  AFLCCKESRKLSVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILAS 580

Query: 434  IGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDST 613
                 KA     KM E QL++D + +  VI+ +   G+L+ A   FK+MI  +VQPD   
Sbjct: 581  ADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVV 640

Query: 614  FKLL 625
            + +L
Sbjct: 641  YGIL 644



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 1/185 (0%)
 Frame = +2

Query: 29   ELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSVIYNSL 208
            E A  L   M   GV PD   +  LI   A     +KA  Y+ +M+      + + Y ++
Sbjct: 550  EKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAV 609

Query: 209  IKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRG- 385
            I  + K+G L+ A+  +K +      P+V     +I+ +++   VR+A    + LR+ G 
Sbjct: 610  ISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGL 669

Query: 386  TANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALE 565
              N   Y  ++ +Y ++G  ++A    + +   ++  D  S N +I LY+    +K+A E
Sbjct: 670  PMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEVGPDVYSSNCMIDLYSERSMVKQAEE 729

Query: 566  TFKDM 580
             F+ +
Sbjct: 730  IFESL 734


>emb|CBI26347.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  303 bits (776), Expect = 3e-80
 Identities = 146/216 (67%), Positives = 184/216 (85%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S++IKLGQLE+AEGLFKEMI   VQPD+VV+G+LINA+ADVG++ +A+ YVN +RNAG  
Sbjct: 592  SSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGLP 651

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEEL 361
             N+VIYNSLIKLYTKVGYL+EAQE YK+LQ+SE GP+VYSSNCMIDLYSER++V+QAEE+
Sbjct: 652  MNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEVGPDVYSSNCMIDLYSERSMVKQAEEI 711

Query: 362  FDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASD 541
            F+ L+ +G ANEFS+AMMLCMYKRIG+  +A  I +KM EL L+TD LS+NNV+  YA D
Sbjct: 712  FESLKRKGDANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMD 771

Query: 542  GRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            GR K+A+ TFK+MI +++QPDD TFK LG VLV+ G
Sbjct: 772  GRFKDAVGTFKEMIEAAIQPDDCTFKSLGVVLVKCG 807



 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 62/244 (25%), Positives = 109/244 (44%), Gaps = 36/244 (14%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S + K   ++ A   FK+M E  ++PD+V +  L+ A++    + +A I V+EM   G  
Sbjct: 384  SLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYAFSIRHLVGEAEILVSEMDERGLE 443

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQ-SSEAGPEVYSSNCMIDLYSERALVRQAE- 355
             +    ++L ++Y + G LK++   ++          E YS+N  ID Y ER  + +AE 
Sbjct: 444  IDEFTQSALTRMYIEAGMLKKSWLWFRRFHLEGNMSSECYSAN--IDAYGERGHILEAEK 501

Query: 356  ---------------------------------ELFDDLRHRGT-ANEFSYAMMLCMYKR 433
                                             +L D + + G   ++FSY  ++ +   
Sbjct: 502  AFLCCKESRKLSVLEFNVMIKAYGISNRYEKACQLIDSMENHGVLPDKFSYNSLIQILAS 561

Query: 434  IGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDST 613
                 KA     KM E QL++D + +  VI+ +   G+L+ A   FK+MI  +VQPD   
Sbjct: 562  ADLPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVV 621

Query: 614  FKLL 625
            + +L
Sbjct: 622  YGIL 625



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 6/220 (2%)
 Frame = +2

Query: 8   YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSG- 184
           Y K G  E A      M + G++PD V  GV++  Y   G   KA  +         S  
Sbjct: 241 YSKGGLTEEALHWLDRMNKQGMEPDEVTMGVVVQTYKKAGEFKKAEQFFKNWSLESASQP 300

Query: 185 ----NSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQA 352
               +S  YN+LI  Y K G L+EA +T+  +      P   + N MI +      + +A
Sbjct: 301 HVCLSSYTYNTLIDTYGKAGQLREASDTFAWMLREGIIPNTVTFNTMIHICGNHGQLEEA 360

Query: 353 EELFDDLRH-RGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIAL 529
             L   +   R   +  +Y +++ ++ +    D+A +  +KM E +L  D +S+  ++  
Sbjct: 361 ASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTLLYA 420

Query: 530 YASDGRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
           ++    + EA     +M    ++ D+ T   L  + +  G
Sbjct: 421 FSIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAG 460



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 1/185 (0%)
 Frame = +2

Query: 29   ELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSVIYNSL 208
            E A  L   M   GV PD   +  LI   A     +KA  Y+ +M+      + + Y ++
Sbjct: 531  EKACQLIDSMENHGVLPDKFSYNSLIQILASADLPHKAKFYLMKMQETQLVSDCIPYCAV 590

Query: 209  IKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRG- 385
            I  + K+G L+ A+  +K +      P+V     +I+ +++   VR+A    + LR+ G 
Sbjct: 591  ISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYGILINAFADVGNVREAVNYVNALRNAGL 650

Query: 386  TANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALE 565
              N   Y  ++ +Y ++G  ++A    + +   ++  D  S N +I LY+    +K+A E
Sbjct: 651  PMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQASEVGPDVYSSNCMIDLYSERSMVKQAEE 710

Query: 566  TFKDM 580
             F+ +
Sbjct: 711  IFESL 715


>ref|XP_007227046.1| hypothetical protein PRUPE_ppa001385mg [Prunus persica]
            gi|462423982|gb|EMJ28245.1| hypothetical protein
            PRUPE_ppa001385mg [Prunus persica]
          Length = 841

 Score =  297 bits (761), Expect = 2e-78
 Identities = 140/216 (64%), Positives = 183/216 (84%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S++ KLGQLE+AEGL+KEM+   VQPD++VFGVLINA+ADVGS+ +A+ Y + M+ AG  
Sbjct: 586  SSFAKLGQLEMAEGLYKEMVGFSVQPDVIVFGVLINAFADVGSVKEALSYADAMKKAGLP 645

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEEL 361
            GN+VIYNSLIKLYTKVG+LKEA+ETY+L+QSSE GP +Y+SNCMIDLYSE+++V+ AEE+
Sbjct: 646  GNTVIYNSLIKLYTKVGFLKEAEETYRLIQSSEDGPSIYASNCMIDLYSEQSMVKPAEEI 705

Query: 362  FDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASD 541
            FD L+ +G ANEFS AMMLCMYK++GRF++A+ IA +M EL+LLTD LS+NNV+ LY   
Sbjct: 706  FDGLKRKGNANEFSCAMMLCMYKKMGRFEEAIQIAEQMRELRLLTDLLSYNNVLGLYVMY 765

Query: 542  GRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            GR KE +ETFK+M+ +++QPDD TFK LG VLV+ G
Sbjct: 766  GRFKEVVETFKEMMRAAIQPDDCTFKSLGLVLVKSG 801



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 54/237 (22%), Positives = 98/237 (41%), Gaps = 23/237 (9%)
 Frame = +2

Query: 8   YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMR------- 166
           Y K G  E A    ++M + G++PD V  G++++ Y   G   KA  + ++         
Sbjct: 218 YSKGGLKEEALLWLEKMNKQGMKPDEVTMGIVVHLYKKAGEFQKAEDFFDKWSLSLSFRQ 277

Query: 167 ------NAGFSGNSV---------IYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYS 301
                  AG  G+S+          YN+LI  Y K G LKEA E +  +      P   +
Sbjct: 278 EGTSTTAAGGLGSSLHSHVSLSSHTYNTLIDTYGKAGQLKEASEIFATMLREGIAPTTVT 337

Query: 302 SNCMIDLYSERALVRQAEELFDDLRH-RGTANEFSYAMMLCMYKRIGRFDKAVAIARKMH 478
            N M+ +      + +   L   +   R  A+  +Y +++ ++ +    D A     KM 
Sbjct: 338 FNTMMHICGNHGRLEEVASLMQKMEEIRCPADTRTYNILISLHAKHDNIDMATKYFTKMK 397

Query: 479 ELQLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
           E  L  D +S+  ++  Y+    + EA +   +M    ++ D+ T   L  + +  G
Sbjct: 398 EAHLEPDHVSYRILLYAYSLRHMVSEAEDLISEMDERGLEIDEFTQSALTRMYIESG 454



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 58/244 (23%), Positives = 110/244 (45%), Gaps = 36/244 (14%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S + K   +++A   F +M E  ++PD V + +L+ AY+    +++A   ++EM   G  
Sbjct: 378  SLHAKHDNIDMATKYFTKMKEAHLEPDHVSYRILLYAYSLRHMVSEAEDLISEMDERGLE 437

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQ-SSEAGPEVYSSNCMIDLYSERALVRQAEE 358
             +    ++L ++Y + G L+++   +     S +   E  S+N  ID Y ER  + +AE+
Sbjct: 438  IDEFTQSALTRMYIESGMLEKSWFWFMRFHLSGKMSSECCSAN--IDAYGERGHILEAEK 495

Query: 359  LFDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAI------------------------- 463
            +F   +     +   + +M+  Y     +DKA  +                         
Sbjct: 496  VFFCCQEVKKLSVLEFNVMIKAYGVGKHYDKACELFNSMESHGVVPDKCSYSSLIQILSS 555

Query: 464  ----------ARKMHELQLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDST 613
                       RKM E +L++D + +  VI+ +A  G+L+ A   +K+M+  SVQPD   
Sbjct: 556  ANMPHIAKPYLRKMQEARLVSDCIPYCAVISSFAKLGQLEMAEGLYKEMVGFSVQPDVIV 615

Query: 614  FKLL 625
            F +L
Sbjct: 616  FGVL 619



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 1/177 (0%)
 Frame = +2

Query: 44   LFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSVIYNSLIKLYT 223
            LF  M   GV PD   +  LI   +     + A  Y+ +M+ A    + + Y ++I  + 
Sbjct: 530  LFNSMESHGVVPDKCSYSSLIQILSSANMPHIAKPYLRKMQEARLVSDCIPYCAVISSFA 589

Query: 224  KVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRG-TANEF 400
            K+G L+ A+  YK +      P+V     +I+ +++   V++A    D ++  G   N  
Sbjct: 590  KLGQLEMAEGLYKEMVGFSVQPDVIVFGVLINAFADVGSVKEALSYADAMKKAGLPGNTV 649

Query: 401  SYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETF 571
             Y  ++ +Y ++G   +A    R +   +      + N +I LY+    +K A E F
Sbjct: 650  IYNSLIKLYTKVGFLKEAEETYRLIQSSEDGPSIYASNCMIDLYSEQSMVKPAEEIF 706


>ref|XP_006378364.1| hypothetical protein POPTR_0010s08940g [Populus trichocarpa]
            gi|550329405|gb|ERP56161.1| hypothetical protein
            POPTR_0010s08940g [Populus trichocarpa]
          Length = 845

 Score =  295 bits (754), Expect = 1e-77
 Identities = 139/216 (64%), Positives = 184/216 (85%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S+++K G+LE AEGL+ EMI   V+PD++V+GVLINA+AD GS+ +A+ YV+ M+ AG  
Sbjct: 590  SSFVKFGKLEKAEGLYNEMIGFDVKPDVIVYGVLINAFADAGSVKEALGYVDAMKRAGLP 649

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEEL 361
            GN+VIYNSLIKLYTKVGYLKEA+ETY+LLQSS++GP+ YSSNCMIDLYSE+++V+QAE++
Sbjct: 650  GNTVIYNSLIKLYTKVGYLKEAEETYQLLQSSDSGPDAYSSNCMIDLYSEQSMVKQAEKI 709

Query: 362  FDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASD 541
            F+ L+ +G  NEF++AMMLCMYKR+GRF++A  IA++M +L LLTD LS+NNV+ LYA D
Sbjct: 710  FESLKRKGNTNEFTFAMMLCMYKRLGRFEEATQIAKQMRDLGLLTDLLSYNNVLGLYALD 769

Query: 542  GRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            GR KEA+ TFK+M+ +SVQPDD TFK LG VLV+ G
Sbjct: 770  GRFKEAVGTFKEMVEASVQPDDCTFKSLGIVLVKCG 805



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 54/230 (23%), Positives = 104/230 (45%), Gaps = 22/230 (9%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S + K   + +A   FK M E  + PD V +  L+ A++    ++ A   V+EM   G  
Sbjct: 396  SLHAKHDNISMAASYFKRMKEARLVPDHVSYRTLLYAFSIRHMVSDAEDLVSEMDEKGLE 455

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQ-SSEAGPEVYSSNCMIDLYSERALVRQAEE 358
             +    ++L ++Y + G L+++   ++          E YS++  ID Y ER  + +AE+
Sbjct: 456  IDEYTQSALTRMYIEAGMLEKSWLWFRRFHLMGNMSSECYSAS--IDAYGERGHILEAEK 513

Query: 359  LFDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIA---------------------RKM 475
            +F   +         + +M+  Y    ++DKA   +                     +KM
Sbjct: 514  VFMSCQEGKMLTVLVFNVMIKAYGLAQKYDKAYRCSYSSIIQILAGADLPDKARHYLKKM 573

Query: 476  HELQLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDSTFKLL 625
             E  L++D +S+  VI+ +   G+L++A   + +MI   V+PD   + +L
Sbjct: 574  QEAGLVSDCISYCAVISSFVKFGKLEKAEGLYNEMIGFDVKPDVIVYGVL 623



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 53/236 (22%), Positives = 99/236 (41%), Gaps = 22/236 (9%)
 Frame = +2

Query: 8   YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNE------MRN 169
           Y K G  E A    K+M + G+ PD V  G++I  Y   G   KA  +         +++
Sbjct: 237 YSKGGLKEEALHWLKKMNDRGMVPDEVTMGIVIQMYKKAGEFQKAEEFFKNWTLGESIKH 296

Query: 170 AGFSG---------------NSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSS 304
            G S                +S  YN+LI  Y K G LKEA ET+  +      P   + 
Sbjct: 297 EGTSKASAGVQNGVQVSVSLSSYTYNTLIDTYGKAGQLKEASETFAKMLREGIVPTTVTF 356

Query: 305 NCMIDLYSERALVRQAEELFDDLRH-RGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHE 481
           N MI +      + +A  L   +   R   +  +Y +++ ++ +      A +  ++M E
Sbjct: 357 NTMIHICGNHGQLEEAGSLMQKMEELRCPPDTRTYNILISLHAKHDNISMAASYFKRMKE 416

Query: 482 LQLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            +L+ D +S+  ++  ++    + +A +   +M    ++ D+ T   L  + +  G
Sbjct: 417 ARLVPDHVSYRTLLYAFSIRHMVSDAEDLVSEMDEKGLEIDEYTQSALTRMYIEAG 472


>ref|XP_004496078.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020-like
            [Cicer arietinum]
          Length = 825

 Score =  293 bits (751), Expect = 2e-77
 Identities = 142/216 (65%), Positives = 182/216 (84%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S+++KLGQLE+AEG++KEMI  GV+PD++V+GVLINA +DVG + +A+ YV+EM+  G  
Sbjct: 570  SSFVKLGQLEMAEGVYKEMIGHGVKPDVIVYGVLINALSDVGRVKEAISYVDEMKRVGLP 629

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEEL 361
            GNSVIYNSLIKLYTKVGYLKEAQETYKLLQ SE GP VYSSNCMI LY+++++V QA+E+
Sbjct: 630  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQLSEEGPAVYSSNCMIGLYTKQSMVDQAKEI 689

Query: 362  FDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASD 541
            F+ L++ GTANEFS+AMMLC+YK I RFD A+ IA +M +L LLTD LS+NNV+ LYA+ 
Sbjct: 690  FETLKNNGTANEFSFAMMLCLYKNIERFDDAIQIANQMRKLGLLTDSLSYNNVLDLYAAA 749

Query: 542  GRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            GR KEA+ETFKDM+  S+Q DD +FK L T+L+RYG
Sbjct: 750  GRPKEAIETFKDMVRGSIQLDDRSFKSLRTLLLRYG 785



 Score = 70.1 bits (170), Expect = 6e-10
 Identities = 49/220 (22%), Positives = 101/220 (45%), Gaps = 24/220 (10%)
 Frame = +2

Query: 38  EGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSVIYNSLIKL 217
           EGL+ +M   G+      +G LI+ Y+  G    A+ ++  M   G   + V    +++L
Sbjct: 176 EGLWNQMNARGIVATNSTYGTLIDVYSKAGLREDALFWLETMLEHGIEPDEVTMVIVVQL 235

Query: 218 YTKVGYLKEAQETYK--------------LLQSSEAGPEV---------YSSNCMIDLYS 328
           Y + G  ++A+E ++              L+ + E+G            ++ N +ID Y 
Sbjct: 236 YKRAGEFQKAEEFFRKWSLGEPLRPNNNHLMAAPESGERTSLSDASFGSHTYNTLIDTYG 295

Query: 329 ERALVRQAEELFDDLRHRGTA-NEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPL 505
           +   +++A E F  +  +G      ++  M+ +    GR ++  ++ +KM ELQ   D  
Sbjct: 296 KAGQLKEASETFVKMLKQGVPPTTVTFNTMIHICGNHGRLEEVSSLLQKMEELQCSPDTR 355

Query: 506 SFNNVIALYASDGRLKEALETFKDMILSSVQPDDSTFKLL 625
           ++N +I+L+     +  A + FK M    ++PD  +++ L
Sbjct: 356 TYNTLISLHTKHNDIDMATKYFKRMKEVCLEPDLVSYRTL 395



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 1/189 (0%)
 Frame = +2

Query: 8   YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGN 187
           Y K GQL+ A   F +M++ GV P  V F  +I+   + G + +    + +M     S +
Sbjct: 294 YGKAGQLKEASETFVKMLKQGVPPTTVTFNTMIHICGNHGRLEEVSSLLQKMEELQCSPD 353

Query: 188 SVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFD 367
           +  YN+LI L+TK   +  A + +K ++     P++ S   ++  YS R +V +AEEL  
Sbjct: 354 TRTYNTLISLHTKHNDIDMATKYFKRMKEVCLEPDLVSYRTLLYAYSIRKMVCEAEELIT 413

Query: 368 DLRHRG-TANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDG 544
           ++  +G   ++F+ + +  MY             ++ H    +T      N+ A Y   G
Sbjct: 414 EMDEKGLEIDQFTQSALTRMYIEAXXXXXXXXXFKRFHMAGNMTPECYAANIDA-YGEHG 472

Query: 545 RLKEALETF 571
            + EA + F
Sbjct: 473 HILEAEKVF 481



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 53/226 (23%), Positives = 91/226 (40%), Gaps = 24/226 (10%)
 Frame = +2

Query: 8   YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYV----------- 154
           Y K G  E A    + M+E G++PD V   +++  Y   G   KA  +            
Sbjct: 201 YSKAGLREDALFWLETMLEHGIEPDEVTMVIVVQLYKRAGEFQKAEEFFRKWSLGEPLRP 260

Query: 155 --NEMRNAGFSGN----------SVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVY 298
             N +  A  SG           S  YN+LI  Y K G LKEA ET+  +      P   
Sbjct: 261 NNNHLMAAPESGERTSLSDASFGSHTYNTLIDTYGKAGQLKEASETFVKMLKQGVPPTTV 320

Query: 299 SSNCMIDLYSERALVRQAEELFDDLRH-RGTANEFSYAMMLCMYKRIGRFDKAVAIARKM 475
           + N MI +      + +   L   +   + + +  +Y  ++ ++ +    D A    ++M
Sbjct: 321 TFNTMIHICGNHGRLEEVSSLLQKMEELQCSPDTRTYNTLISLHTKHNDIDMATKYFKRM 380

Query: 476 HELQLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDST 613
            E+ L  D +S+  ++  Y+    + EA E   +M    ++ D  T
Sbjct: 381 KEVCLEPDLVSYRTLLYAYSIRKMVCEAEELITEMDEKGLEIDQFT 426



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
 Frame = +2

Query: 44   LFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSVIYNSLIKLYT 223
            LF  M   GV  D   +  LI   A       A  Y+ +M+ AG   N + Y ++I  + 
Sbjct: 514  LFDSMDTHGVAADRCSYSSLIQILASADRPYIAKPYLKKMQVAGLVTNCIPYCAVISSFV 573

Query: 224  KVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRG-TANEF 400
            K+G L+ A+  YK +      P+V     +I+  S+   V++A    D+++  G   N  
Sbjct: 574  KLGQLEMAEGVYKEMIGHGVKPDVIVYGVLINALSDVGRVKEAISYVDEMKRVGLPGNSV 633

Query: 401  SYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETFKDM 580
             Y  ++ +Y ++G   +A    + +   +      S N +I LY     + +A E F+ +
Sbjct: 634  IYNSLIKLYTKVGYLKEAQETYKLLQLSEEGPAVYSSNCMIGLYTKQSMVDQAKEIFETL 693



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 43/183 (23%), Positives = 84/183 (45%), Gaps = 1/183 (0%)
 Frame = +2

Query: 2   SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
           S + K   +++A   FK M E  ++PD+V +  L+ AY+    + +A   + EM   G  
Sbjct: 362 SLHTKHNDIDMATKYFKRMKEVCLEPDLVSYRTLLYAYSIRKMVCEAEELITEMDEKGLE 421

Query: 182 GNSVIYNSLIKLYTKVGYLKEAQETYKLL-QSSEAGPEVYSSNCMIDLYSERALVRQAEE 358
            +    ++L ++Y +          +K    +    PE Y++N  ID Y E   + +AE+
Sbjct: 422 IDQFTQSALTRMYIEAXXXXXXXXXFKRFHMAGNMTPECYAAN--IDAYGEHGHILEAEK 479

Query: 359 LFDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYAS 538
           +F   + R   +   + +M+ +Y     +DK   +   M    +  D  S++++I + AS
Sbjct: 480 VFHWCQERKKLSVLEFNVMIKVYGIGKCYDKVCLLFDSMDTHGVAADRCSYSSLIQILAS 539

Query: 539 DGR 547
             R
Sbjct: 540 ADR 542


>gb|EXB44177.1| hypothetical protein L484_010283 [Morus notabilis]
          Length = 857

 Score =  291 bits (745), Expect = 1e-76
 Identities = 139/216 (64%), Positives = 181/216 (83%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S+++KLG+LE+AEGL+KEM+   VQPD++VFG+LINA+ADVG + +A+ YV+ M+ AG  
Sbjct: 602  SSFVKLGRLEMAEGLYKEMVGFDVQPDVIVFGILINAFADVGCVKEALGYVDAMKKAGLP 661

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEEL 361
            GN+VIYNSLIKLYTKVG+LKEAQETYKLLQSSE GP VYSSNCMIDLYSER++V+ AEE+
Sbjct: 662  GNTVIYNSLIKLYTKVGFLKEAQETYKLLQSSEEGPAVYSSNCMIDLYSERSMVQPAEEI 721

Query: 362  FDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASD 541
            F+ L+ +  ANEF++AMMLCMYK++GRF++A+AIAR+M E  LLTD LS+NN++ LYA  
Sbjct: 722  FESLKRKRAANEFTFAMMLCMYKKLGRFEEAIAIARQMREQGLLTDLLSYNNILGLYAMC 781

Query: 542  GRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            GR K+ + TF +MI +SV+PDD T K L  VLV+ G
Sbjct: 782  GRFKDVVATFNEMIEASVEPDDCTLKSLAVVLVKSG 817



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 1/198 (0%)
 Frame = +2

Query: 35   AEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSVIYNSLIK 214
            AE L  E    G++ D      L   Y + G++ K+ ++      AG +  S  Y++ I 
Sbjct: 440  AEDLIAETDCRGLEIDEYTQSALTRMYIEAGNLEKSWLWFRRFHLAG-NMTSECYSANID 498

Query: 215  LYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRGT-A 391
             Y + G+++EA+  ++  Q       V   N MI  Y       QA ELFD +   G   
Sbjct: 499  AYGERGHIREAENVFRCCQEGNK-LSVLEFNVMIKAYGLAKCYHQACELFDSMERHGVFP 557

Query: 392  NEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETF 571
            ++ SY+ ++ +        +A +  RKM +  L+ D + +  VI+ +   GRL+ A   +
Sbjct: 558  DKCSYSSLVQILASADMPHEAKSYLRKMQDSGLVRDCIPYCTVISSFVKLGRLEMAEGLY 617

Query: 572  KDMILSSVQPDDSTFKLL 625
            K+M+   VQPD   F +L
Sbjct: 618  KEMVGFDVQPDVIVFGIL 635



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 53/237 (22%), Positives = 93/237 (39%), Gaps = 23/237 (9%)
 Frame = +2

Query: 8   YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNE------MRN 169
           Y K G  + A     +M E G++PD V  G+++  Y   G   KA  +  +      +R 
Sbjct: 234 YSKGGLKKEALVWLAKMNEQGMEPDEVTMGIVVQMYKKAGEFQKAEDFFKKWSLGEVLRK 293

Query: 170 AGFSGN----------------SVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYS 301
            G + N                S  YN LI  Y K G LKEA E +  +      P   +
Sbjct: 294 EGDAMNGTTKVEGALNSNVCLSSHTYNMLIDTYGKAGQLKEASEVFAQMLREGKAPTTVT 353

Query: 302 SNCMIDLYSERALVRQAEELFDDLRH-RGTANEFSYAMMLCMYKRIGRFDKAVAIARKMH 478
            N MI +      + +   L   +   R   +  +Y +++ ++ +    + A    RKM 
Sbjct: 354 FNTMIHICGNNGQLEEVNSLMRKMEELRCPPDTRTYNILISLHAKHDNINMATNYFRKMK 413

Query: 479 ELQLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
           E  L  D +S+  ++  Y+    + EA +   +     ++ D+ T   L  + +  G
Sbjct: 414 EASLEPDLVSYRTLLYAYSIRQMVHEAEDLIAETDCRGLEIDEYTQSALTRMYIEAG 470



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 41/180 (22%), Positives = 85/180 (47%), Gaps = 1/180 (0%)
 Frame = +2

Query: 44   LFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSVIYNSLIKLYT 223
            LF  M   GV PD   +  L+   A     ++A  Y+ +M+++G   + + Y ++I  + 
Sbjct: 546  LFDSMERHGVFPDKCSYSSLVQILASADMPHEAKSYLRKMQDSGLVRDCIPYCTVISSFV 605

Query: 224  KVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRG-TANEF 400
            K+G L+ A+  YK +   +  P+V     +I+ +++   V++A    D ++  G   N  
Sbjct: 606  KLGRLEMAEGLYKEMVGFDVQPDVIVFGILINAFADVGCVKEALGYVDAMKKAGLPGNTV 665

Query: 401  SYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETFKDM 580
             Y  ++ +Y ++G   +A    + +   +      S N +I LY+    ++ A E F+ +
Sbjct: 666  IYNSLIKLYTKVGFLKEAQETYKLLQSSEEGPAVYSSNCMIDLYSERSMVQPAEEIFESL 725


>ref|XP_007034933.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
            cacao] gi|508713962|gb|EOY05859.1| Tetratricopeptide
            repeat (TPR)-like superfamily protein [Theobroma cacao]
          Length = 856

 Score =  291 bits (745), Expect = 1e-76
 Identities = 141/216 (65%), Positives = 183/216 (84%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S+++KLG+LE+AEGL+ EMI+  V+PD+VV+GVLINA+AD+GS+ +A  YVN M++AG  
Sbjct: 598  SSFVKLGELEMAEGLYGEMIQYKVEPDVVVYGVLINAFADLGSVKEATSYVNAMKSAGLP 657

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEEL 361
            GN+VIYNSLIKLYTKVGYLKEAQE Y+LLQ S   P+VYSSNCMIDLYS+R++V QAE +
Sbjct: 658  GNAVIYNSLIKLYTKVGYLKEAQEVYELLQLSGFHPDVYSSNCMIDLYSKRSMVSQAEAI 717

Query: 362  FDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASD 541
            F +L+ +G ANEF+YAMMLCMYKR GRF++A+ IA++M +L LLTD LS+NNV+ LYA D
Sbjct: 718  FKNLKQKGDANEFTYAMMLCMYKRNGRFEEAIHIAKQMRDLGLLTDLLSYNNVLGLYAMD 777

Query: 542  GRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            GR KEA+ TFK+M+ + +QPDDSTFK LG VL++ G
Sbjct: 778  GRFKEAVGTFKEMMSACIQPDDSTFKSLGFVLMKCG 813



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 47/180 (26%), Positives = 92/180 (51%), Gaps = 1/180 (0%)
 Frame = +2

Query: 2   SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
           S + K   +++A G F +M E  ++PD+V +  L+ AY+    +++A   +NEM +    
Sbjct: 390 SLHAKHDDIKMAAGYFAKMKEVCLEPDLVSYRTLLYAYSIRQMVSEAEDLINEMDDQLLE 449

Query: 182 GNSVIYNSLIKLYTKVGYLKEAQETYKLLQ-SSEAGPEVYSSNCMIDLYSERALVRQAEE 358
            +    ++L ++Y + G L+++   ++    +     E YS+N  ID + ER  V +AE+
Sbjct: 450 IDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGNMSSEGYSAN--IDAFGERGHVFEAEK 507

Query: 359 LFDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYAS 538
           +F   + R T     + +M+  Y     F+KA  +   M    ++ D  S+N++I + AS
Sbjct: 508 VFVCCQERETLTVLEFNVMIKAYGIGKSFEKACWLFDSMQGHGVVPDKCSYNSLIQILAS 567



 Score = 63.5 bits (153), Expect = 5e-08
 Identities = 45/185 (24%), Positives = 85/185 (45%), Gaps = 1/185 (0%)
 Frame = +2

Query: 29   ELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSVIYNSL 208
            E A  LF  M   GV PD   +  LI   A     + A  Y+ +M+ AGF  + + Y ++
Sbjct: 537  EKACWLFDSMQGHGVVPDKCSYNSLIQILASADLPHVAKCYLKKMQEAGFISDCIPYCAV 596

Query: 209  IKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRG- 385
            I  + K+G L+ A+  Y  +   +  P+V     +I+ +++   V++A    + ++  G 
Sbjct: 597  ISSFVKLGELEMAEGLYGEMIQYKVEPDVVVYGVLINAFADLGSVKEATSYVNAMKSAGL 656

Query: 386  TANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALE 565
              N   Y  ++ +Y ++G   +A  +   +       D  S N +I LY+    + +A  
Sbjct: 657  PGNAVIYNSLIKLYTKVGYLKEAQEVYELLQLSGFHPDVYSSNCMIDLYSKRSMVSQAEA 716

Query: 566  TFKDM 580
             FK++
Sbjct: 717  IFKNL 721



 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 16/222 (7%)
 Frame = +2

Query: 8   YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAG---- 175
           Y K G+ + A     +M + G++PD V  G+++  Y   G    A  +  +    G    
Sbjct: 236 YSKGGKKQQALCWLGKMNKQGMEPDEVTMGIVVQLYKKAGEFQNAEEFFKKWSLNGSLKH 295

Query: 176 -----FSG-------NSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMID 319
                FS        +S  YN+LI  Y K G L+EA ET++++      P   + N MI 
Sbjct: 296 DGSETFSAVGSDLHLSSYTYNTLIDTYGKAGQLQEASETFEMMLREGIVPTTVTFNTMIH 355

Query: 320 LYSERALVRQAEELFDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTD 499
           +                                      G+ ++  ++ +KM E+Q L D
Sbjct: 356 ICGNH----------------------------------GKLEEVASLMKKMEEVQCLPD 381

Query: 500 PLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDSTFKLL 625
             ++N +I+L+A    +K A   F  M    ++PD  +++ L
Sbjct: 382 TRTYNILISLHAKHDDIKMAAGYFAKMKEVCLEPDLVSYRTL 423


>ref|XP_006362174.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020-like
            [Solanum tuberosum]
          Length = 959

 Score =  291 bits (744), Expect = 2e-76
 Identities = 143/216 (66%), Positives = 180/216 (83%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S+++K+GQLE+A  LF EMI  G++PD+VV+GVLINA+AD+GS+  A  Y+ EMRN+G  
Sbjct: 699  SSFVKVGQLEMAVSLFDEMIVFGIKPDVVVYGVLINAFADMGSVKDATKYLVEMRNSGLE 758

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEEL 361
             N+VIY SLIKLYTKVGYL+EAQETYK+LQS E G +VYSSNCMIDLYSER++V+QAEE+
Sbjct: 759  ANAVIYTSLIKLYTKVGYLREAQETYKMLQSFEEGLDVYSSNCMIDLYSERSMVKQAEEI 818

Query: 362  FDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASD 541
            F+ L+ +G ANEFSYAMMLCMY+R G F +A+  ARKM EL LLTD LS+NNV+ L ASD
Sbjct: 819  FEHLKKKGNANEFSYAMMLCMYRRNGMFKEAIQNARKMKELGLLTDLLSYNNVLGLCASD 878

Query: 542  GRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            GR KEAL T+K+M+ S++QPDDSTFK LG VL++ G
Sbjct: 879  GRYKEALATYKEMLSSAIQPDDSTFKSLGIVLLKCG 914



 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 1/180 (0%)
 Frame = +2

Query: 44   LFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSVIYNSLIKLYT 223
            LF  M + G+ PD   +  LI   A      KA  YV EM+ AG   + + Y ++I  + 
Sbjct: 643  LFDSMEKHGLSPDKCSYSSLIQMLAGADLPLKAASYVREMKEAGLVDDCIPYCAVISSFV 702

Query: 224  KVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRG-TANEF 400
            KVG L+ A   +  +      P+V     +I+ +++   V+ A +   ++R+ G  AN  
Sbjct: 703  KVGQLEMAVSLFDEMIVFGIKPDVVVYGVLINAFADMGSVKDATKYLVEMRNSGLEANAV 762

Query: 401  SYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETFKDM 580
             Y  ++ +Y ++G   +A    + +   +   D  S N +I LY+    +K+A E F+ +
Sbjct: 763  IYTSLIKLYTKVGYLREAQETYKMLQSFEEGLDVYSSNCMIDLYSERSMVKQAEEIFEHL 822



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 60/230 (26%), Positives = 92/230 (40%), Gaps = 24/230 (10%)
 Frame = +2

Query: 8   YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNE--------- 160
           Y K G+ E A    K M E G+ PD V  G+++  Y   G   KA  ++ +         
Sbjct: 329 YSKGGRREQAMEWLKLMNERGMVPDEVTMGIVVQMYKMAGEFKKAEEFLKKWSLCKCQVE 388

Query: 161 ----------MRNAGFSGNSVI-----YNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEV 295
                     +R  G SG+SV      YN+LI  Y K G +KEA ET+  +      P  
Sbjct: 389 ERVNGGPRSGIRVNGSSGSSVCLSSHTYNNLIDTYGKAGQVKEAYETFHQMLREGILPTT 448

Query: 296 YSSNCMIDLYSERALVRQAEELFDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKM 475
            + N MI +                                      GR ++  ++ RKM
Sbjct: 449 VTFNTMIHMCGNN----------------------------------GRMEEVASLMRKM 474

Query: 476 HELQLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDSTFKLL 625
             LQ   D  ++N +I+L+A    ++ A   FK M  +S++PD  T++ L
Sbjct: 475 EGLQCHPDTRTYNILISLHAKHDNIEMAATYFKIMKDASLEPDAVTYRTL 524



 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 47/240 (19%), Positives = 97/240 (40%), Gaps = 34/240 (14%)
 Frame = +2

Query: 8    YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGN 187
            Y K GQ++ A   F +M+ +G+ P  V F  +I+   + G + +    + +M       +
Sbjct: 423  YGKAGQVKEAYETFHQMLREGILPTTVTFNTMIHMCGNNGRMEEVASLMRKMEGLQCHPD 482

Query: 188  SVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFD 367
            +  YN LI L+ K   ++ A   +K+++ +   P+  +   ++  +S R +V +AE+L  
Sbjct: 483  TRTYNILISLHAKHDNIEMAATYFKIMKDASLEPDAVTYRTLLYAFSIRNMVSEAEKLIL 542

Query: 368  DLRHRGTA-NEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDP-------------- 502
            ++  +    +EF+ + +  MY   G  + + +  ++ H    ++                
Sbjct: 543  EMDKKDLQIDEFTQSALTRMYLEAGMVEMSWSWFQRFHLAGKMSSECYSANIDAYGERGH 602

Query: 503  -------------------LSFNNVIALYASDGRLKEALETFKDMILSSVQPDDSTFKLL 625
                               L FN +I  Y    +  EA   F  M    + PD  ++  L
Sbjct: 603  ISEAERAFNCCSEGKRLTVLEFNVMIKAYGISKKYNEACYLFDSMEKHGLSPDKCSYSSL 662


>ref|XP_004247685.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020-like
            [Solanum lycopersicum]
          Length = 966

 Score =  290 bits (743), Expect = 2e-76
 Identities = 142/216 (65%), Positives = 181/216 (83%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S+++K+GQLE+A  LF EMI  G++PD+V++GVLINA+AD+GS+  A  Y+ EMRN+G  
Sbjct: 706  SSFVKVGQLEMAVSLFDEMIVFGIKPDVVLYGVLINAFADMGSVKDATKYLVEMRNSGLE 765

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEEL 361
             N+VIY SLIKLYTKVGYL+EAQETYK+LQS EAG +VYSSNCMIDLYSER++V+QAEE+
Sbjct: 766  ANAVIYTSLIKLYTKVGYLREAQETYKMLQSFEAGLDVYSSNCMIDLYSERSMVKQAEEI 825

Query: 362  FDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASD 541
            F+ L+ +G ANEFSYAMMLCMY+R G F +A+  ARKM EL LLTD LS+NNV+ L A+D
Sbjct: 826  FEHLKKKGNANEFSYAMMLCMYRRNGMFKEAIQNARKMKELGLLTDLLSYNNVLGLCATD 885

Query: 542  GRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            GR KEAL T+K+M+ S++QPDDSTFK LG VL++ G
Sbjct: 886  GRYKEALATYKEMLSSAIQPDDSTFKSLGIVLLKCG 921



 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 47/180 (26%), Positives = 85/180 (47%), Gaps = 1/180 (0%)
 Frame = +2

Query: 44   LFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSVIYNSLIKLYT 223
            LF  M + G+ PD   +  LI   A      KA  YV EM+ AG   + + Y ++I  + 
Sbjct: 650  LFDSMEKHGLSPDKCSYSSLIQMLAGADLPLKAASYVREMQEAGLVNDCIPYCAVISSFV 709

Query: 224  KVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRG-TANEF 400
            KVG L+ A   +  +      P+V     +I+ +++   V+ A +   ++R+ G  AN  
Sbjct: 710  KVGQLEMAVSLFDEMIVFGIKPDVVLYGVLINAFADMGSVKDATKYLVEMRNSGLEANAV 769

Query: 401  SYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETFKDM 580
             Y  ++ +Y ++G   +A    + +   +   D  S N +I LY+    +K+A E F+ +
Sbjct: 770  IYTSLIKLYTKVGYLREAQETYKMLQSFEAGLDVYSSNCMIDLYSERSMVKQAEEIFEHL 829



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 60/230 (26%), Positives = 92/230 (40%), Gaps = 24/230 (10%)
 Frame = +2

Query: 8   YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNE--------- 160
           Y K G+ E A    K M E G+ PD V  G+++  Y   G   KA  ++ +         
Sbjct: 336 YSKGGRREQAMEWLKLMNERGMVPDEVTMGIVVQMYKMAGEFKKAEEFLKKWSLCKFQVE 395

Query: 161 ----------MRNAGFSGNSVI-----YNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEV 295
                     +R  G SG+SV      YN+LI  Y K G +KEA ET+  +      P  
Sbjct: 396 ERVNGGPRSGIRVNGSSGSSVCLSSHTYNNLIDTYGKAGQVKEAYETFHQMLREGILPTT 455

Query: 296 YSSNCMIDLYSERALVRQAEELFDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKM 475
            + N MI +                                      GR ++  ++ RKM
Sbjct: 456 VTFNTMIHMCGNN----------------------------------GRMEEVASLMRKM 481

Query: 476 HELQLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDSTFKLL 625
             LQ   D  ++N +I+L+A    ++ A   FK M  +S++PD  T++ L
Sbjct: 482 EGLQCHPDTRTYNILISLHAKHDNIEMAATYFKIMKDASLEPDAVTYRTL 531


>ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543667|gb|EEF45195.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 875

 Score =  290 bits (741), Expect = 3e-76
 Identities = 137/216 (63%), Positives = 182/216 (84%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S+++KLG+LE+AE ++KEM+   V+PDI+V+GVLINA+AD G + +A+ Y++ M+ AG  
Sbjct: 616  SSFVKLGKLEMAEEVYKEMVGFDVKPDIIVYGVLINAFADSGCVKEAISYIDAMKGAGLP 675

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEEL 361
            GN+VIYNSLIKLYTKVGYL+EAQETYKLLQSS+ GPE YSSNCMIDLYSE+++V+ AEE+
Sbjct: 676  GNTVIYNSLIKLYTKVGYLREAQETYKLLQSSDVGPETYSSNCMIDLYSEQSMVKPAEEI 735

Query: 362  FDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASD 541
            F+ ++ +G ANEF+YAMMLCMYKR+G F++A+ IA++M EL LLT  LS+NNV+ LYA D
Sbjct: 736  FESMKRKGDANEFTYAMMLCMYKRLGWFEQAIQIAKQMRELGLLTYLLSYNNVLGLYALD 795

Query: 542  GRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            GR KEA+ TFK+M+ + +QPDD TFK LG VLV+ G
Sbjct: 796  GRFKEAVGTFKEMVGAGIQPDDCTFKSLGIVLVKCG 831



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 1/185 (0%)
 Frame = +2

Query: 29   ELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSVIYNSL 208
            E A  LF  M   GV PD   +  L+   A     +KA  Y+ +M+ AG   + V Y ++
Sbjct: 555  EKACDLFDSMESHGVVPDKCSYSSLVQILASADLPDKAKHYLKKMQEAGLVSDCVQYCAV 614

Query: 209  IKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRG- 385
            I  + K+G L+ A+E YK +   +  P++     +I+ +++   V++A    D ++  G 
Sbjct: 615  ISSFVKLGKLEMAEEVYKEMVGFDVKPDIIVYGVLINAFADSGCVKEAISYIDAMKGAGL 674

Query: 386  TANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALE 565
              N   Y  ++ +Y ++G   +A    + +    +  +  S N +I LY+    +K A E
Sbjct: 675  PGNTVIYNSLIKLYTKVGYLREAQETYKLLQSSDVGPETYSSNCMIDLYSEQSMVKPAEE 734

Query: 566  TFKDM 580
             F+ M
Sbjct: 735  IFESM 739



 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 59/242 (24%), Positives = 109/242 (45%), Gaps = 36/242 (14%)
 Frame = +2

Query: 8    YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGN 187
            + K   + +A   FK M +D +QPD+V +  L+ A++    +N A   V+EM   G   +
Sbjct: 410  HAKHNDINMAASYFKRMKKDQLQPDLVSYRTLLYAFSIRHMVNDAENLVSEMDEKGIEID 469

Query: 188  SVIYNSLIKLYTKVGYLKEAQETY-KLLQSSEAGPEVYSSNCMIDLYSERALVRQAE--- 355
                ++L ++Y + G L+++   + +   +     E YS+N  ID Y ER  V++A    
Sbjct: 470  EYTQSALTRMYIEAGMLEKSWLWFWRFHLAGNMSSECYSAN--IDAYGERGHVKEAARVF 527

Query: 356  -------------------------------ELFDDLRHRGTA-NEFSYAMMLCMYKRIG 439
                                           +LFD +   G   ++ SY+ ++ +     
Sbjct: 528  ACRLEQNKLTVLEFNVMIKAYGFGKNYEKACDLFDSMESHGVVPDKCSYSSLVQILASAD 587

Query: 440  RFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDSTFK 619
              DKA    +KM E  L++D + +  VI+ +   G+L+ A E +K+M+   V+PD   + 
Sbjct: 588  LPDKAKHYLKKMQEAGLVSDCVQYCAVISSFVKLGKLEMAEEVYKEMVGFDVKPDIIVYG 647

Query: 620  LL 625
            +L
Sbjct: 648  VL 649



 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
 Frame = +2

Query: 8   YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGN 187
           Y K GQ++ A  +F EM+   + P  V F  +I+   + G + +  + + +M       +
Sbjct: 340 YGKAGQIKEASDIFAEMLRKRILPTTVTFNTMIHICGNQGQLEEVALLMQKMEELRCPPD 399

Query: 188 SVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFD 367
           +  YN LI ++ K   +  A   +K ++  +  P++ S   ++  +S R +V  AE L  
Sbjct: 400 TRTYNILIFIHAKHNDINMAASYFKRMKKDQLQPDLVSYRTLLYAFSIRHMVNDAENLVS 459

Query: 368 DLRHRG-TANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDG 544
           ++  +G   +E++ + +  MY   G  +K+     + H    ++      N+ A Y   G
Sbjct: 460 EMDEKGIEIDEYTQSALTRMYIEAGMLEKSWLWFWRFHLAGNMSSECYSANIDA-YGERG 518

Query: 545 RLKEALETF 571
            +KEA   F
Sbjct: 519 HVKEAARVF 527



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 47/236 (19%), Positives = 96/236 (40%), Gaps = 22/236 (9%)
 Frame = +2

Query: 8   YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKA--------------- 142
           Y K G  E A    ++M + G++PD V  G+++  Y   G   KA               
Sbjct: 249 YSKGGLREKALDWLEKMNKQGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSLREALRH 308

Query: 143 ------MIYVNEMRNAGFSGNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSS 304
                  + V   R    S +S  YN++I  Y K G +KEA + +  +      P   + 
Sbjct: 309 KVTGKASVRVENERQMDVSLSSHTYNTMIDTYGKAGQIKEASDIFAEMLRKRILPTTVTF 368

Query: 305 NCMIDLYSERALVRQAEELFDDLRH-RGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHE 481
           N MI +   +  + +   L   +   R   +  +Y +++ ++ +    + A +  ++M +
Sbjct: 369 NTMIHICGNQGQLEEVALLMQKMEELRCPPDTRTYNILIFIHAKHNDINMAASYFKRMKK 428

Query: 482 LQLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            QL  D +S+  ++  ++    + +A     +M    ++ D+ T   L  + +  G
Sbjct: 429 DQLQPDLVSYRTLLYAFSIRHMVNDAENLVSEMDEKGIEIDEYTQSALTRMYIEAG 484


>ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g23020-like [Cucumis sativus]
          Length = 859

 Score =  285 bits (728), Expect = 1e-74
 Identities = 132/216 (61%), Positives = 181/216 (83%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S++ KLG LE+A+ L++EM++ GVQPDI+V+GVLINA+AD GS+ +A+ YVN M+  G S
Sbjct: 603  SSFSKLGHLEMADKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAINYVNAMKRDGLS 662

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEEL 361
            GN+VIYNSLIKLYTKVGYLKEA E YK+L+ ++ GP +YSSNCMIDLYSER++V++AEE+
Sbjct: 663  GNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEI 722

Query: 362  FDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASD 541
            F+ L+ +G ANEF++AMMLCMYK+IGR  +A+ +AR+M E  LL+D LSFNN+I+LYA D
Sbjct: 723  FESLKKKGEANEFTFAMMLCMYKKIGRIQEAICVARQMKEQGLLSDLLSFNNMISLYAMD 782

Query: 542  GRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            GR KEA+  F++M+ ++VQPD+ T+K LG VL++ G
Sbjct: 783  GRFKEAVSIFQEMMKAAVQPDECTYKSLGVVLLKCG 818



 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 55/230 (23%), Positives = 107/230 (46%), Gaps = 26/230 (11%)
 Frame = +2

Query: 14  KLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSV 193
           K  +  L E L+ EM + G++P    +G LI+ Y+  G   +A++++  M   G   + V
Sbjct: 199 KAQKWRLVESLWVEMNKKGIKPINSTYGTLIDVYSKGGFKEEALVWLERMNEQGMEPDEV 258

Query: 194 IYNSLIKLYTKVGYLKEAQETYKL---------------------LQSSEAGPEV----Y 298
               +++LY K G  ++A+  +K                      ++SS   P V    Y
Sbjct: 259 TMGIVVQLYKKAGEFQKAESFFKKWSSCNSMKYEITNKKKAASVKVESSLHPPHVSLSTY 318

Query: 299 SSNCMIDLYSERALVRQAEELFDDLRHRGTA-NEFSYAMMLCMYKRIGRFDKAVAIARKM 475
           + N +ID Y +   +++A   F+++   G +    ++  M+ +    G+  +   + +KM
Sbjct: 319 TYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLMQKM 378

Query: 476 HELQLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDSTFKLL 625
            ELQ   D  ++N +I+LYA    +  A   F +M  + +QPD  +++ L
Sbjct: 379 EELQCPPDTRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTL 428



 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 60/244 (24%), Positives = 110/244 (45%), Gaps = 36/244 (14%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S Y K   ++LA   F EM E G+QPDIV +  L+ AY+    + +A   + EM   G  
Sbjct: 395  SLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYSIRHMVAEAEKLITEMDERGLE 454

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETY-KLLQSSEAGPEVYSSNCMIDLYSERALVRQAE- 355
             +    ++L ++Y   G L+E+   + +   +     E YS+N  ID Y ER  + +AE 
Sbjct: 455  IDEFTQSALTRMYIDAGMLEESWSWFWRFHLAGHMSSECYSAN--IDAYGERGFILEAER 512

Query: 356  ---------------------------------ELFDDLRHRGTA-NEFSYAMMLCMYKR 433
                                             ++FD ++  G   ++ SY+ ++ +   
Sbjct: 513  VFVSCQEEKKCTVLEFNVMIKAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSLIQILTG 572

Query: 434  IGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDST 613
                  A+A  +KM    L++D + ++ VI+ ++  G L+ A + +++M+   VQPD   
Sbjct: 573  ADMPAMALAYLKKMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHGVQPDIIV 632

Query: 614  FKLL 625
            + +L
Sbjct: 633  YGVL 636



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 1/189 (0%)
 Frame = +2

Query: 8   YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGN 187
           Y K GQL+ A   F+ M+++GV P  V F  +I+   + G + +    + +M       +
Sbjct: 327 YGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLMQKMEELQCPPD 386

Query: 188 SVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFD 367
           +  YN LI LY K   +  A   +  ++ +   P++ S   ++  YS R +V +AE+L  
Sbjct: 387 TRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYSIRHMVAEAEKLIT 446

Query: 368 DLRHRG-TANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDG 544
           ++  RG   +EF+ + +  MY   G  +++ +   + H    ++      N+ A Y   G
Sbjct: 447 EMDERGLEIDEFTQSALTRMYIDAGMLEESWSWFWRFHLAGHMSSECYSANIDA-YGERG 505

Query: 545 RLKEALETF 571
            + EA   F
Sbjct: 506 FILEAERVF 514



 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 41/183 (22%), Positives = 89/183 (48%), Gaps = 1/183 (0%)
 Frame = +2

Query: 35   AEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSVIYNSLIK 214
            A+ +F  M  +GV PD   +  LI           A+ Y+ +M++AG   + + Y+ +I 
Sbjct: 544  AQKIFDSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYLKKMQSAGLVSDCIPYSVVIS 603

Query: 215  LYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRG-TA 391
             ++K+G+L+ A + Y+ +      P++     +I+ +++   V++A    + ++  G + 
Sbjct: 604  SFSKLGHLEMADKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAINYVNAMKRDGLSG 663

Query: 392  NEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETF 571
            N   Y  ++ +Y ++G   +A    + + +        S N +I LY+    +KEA E F
Sbjct: 664  NTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIF 723

Query: 572  KDM 580
            + +
Sbjct: 724  ESL 726



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 47/214 (21%), Positives = 84/214 (39%), Gaps = 26/214 (12%)
 Frame = +2

Query: 8   YIKLGQLELAEGLFKEM--------------------IEDGVQPDIV-----VFGVLINA 112
           Y K G+ + AE  FK+                     +E  + P  V      +  LI+ 
Sbjct: 267 YKKAGEFQKAESFFKKWSSCNSMKYEITNKKKAASVKVESSLHPPHVSLSTYTYNTLIDT 326

Query: 113 YADVGSINKAMIYVNEMRNAGFSGNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPE 292
           Y   G + +A      M   G S  +V +N++I +    G LKE     + ++  +  P+
Sbjct: 327 YGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLMQKMEELQCPPD 386

Query: 293 VYSSNCMIDLYSERALVRQAEELFDDLRHRGTANEF-SYAMMLCMYKRIGRFDKAVAIAR 469
             + N +I LY++   +  A   F ++   G   +  SY  +L  Y       +A  +  
Sbjct: 387 TRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYSIRHMVAEAEKLIT 446

Query: 470 KMHELQLLTDPLSFNNVIALYASDGRLKEALETF 571
           +M E  L  D  + + +  +Y   G L+E+   F
Sbjct: 447 EMDERGLEIDEFTQSALTRMYIDAGMLEESWSWF 480


>ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020-like
            [Cucumis sativus]
          Length = 858

 Score =  285 bits (728), Expect = 1e-74
 Identities = 132/216 (61%), Positives = 181/216 (83%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S++ KLG LE+A+ L++EM++ GVQPDI+V+GVLINA+AD GS+ +A+ YVN M+  G S
Sbjct: 602  SSFSKLGHLEMADKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAINYVNAMKRDGLS 661

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEEL 361
            GN+VIYNSLIKLYTKVGYLKEA E YK+L+ ++ GP +YSSNCMIDLYSER++V++AEE+
Sbjct: 662  GNTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEI 721

Query: 362  FDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASD 541
            F+ L+ +G ANEF++AMMLCMYK+IGR  +A+ +AR+M E  LL+D LSFNN+I+LYA D
Sbjct: 722  FESLKKKGEANEFTFAMMLCMYKKIGRIQEAICVARQMKEQGLLSDLLSFNNMISLYAMD 781

Query: 542  GRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            GR KEA+  F++M+ ++VQPD+ T+K LG VL++ G
Sbjct: 782  GRFKEAVSIFQEMMKAAVQPDECTYKSLGVVLLKCG 817



 Score = 79.7 bits (195), Expect = 7e-13
 Identities = 55/230 (23%), Positives = 107/230 (46%), Gaps = 26/230 (11%)
 Frame = +2

Query: 14  KLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSV 193
           K  +  L E L+ EM + G++P    +G LI+ Y+  G   +A++++  M   G   + V
Sbjct: 198 KAQKWRLVESLWVEMNKKGIKPINSTYGTLIDVYSKGGFKEEALVWLERMNEQGMEPDEV 257

Query: 194 IYNSLIKLYTKVGYLKEAQETYKL---------------------LQSSEAGPEV----Y 298
               +++LY K G  ++A+  +K                      ++SS   P V    Y
Sbjct: 258 TMGIVVQLYKKAGEFQKAESFFKKWSSCNSMKYEITNKKKAASVKVESSLHPPHVSLSTY 317

Query: 299 SSNCMIDLYSERALVRQAEELFDDLRHRGTA-NEFSYAMMLCMYKRIGRFDKAVAIARKM 475
           + N +ID Y +   +++A   F+++   G +    ++  M+ +    G+  +   + +KM
Sbjct: 318 TYNTLIDTYGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLMQKM 377

Query: 476 HELQLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDSTFKLL 625
            ELQ   D  ++N +I+LYA    +  A   F +M  + +QPD  +++ L
Sbjct: 378 EELQCPPDTRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTL 427



 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 60/244 (24%), Positives = 110/244 (45%), Gaps = 36/244 (14%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S Y K   ++LA   F EM E G+QPDIV +  L+ AY+    + +A   + EM   G  
Sbjct: 394  SLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYSIRHMVAEAEKLITEMDERGLE 453

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETY-KLLQSSEAGPEVYSSNCMIDLYSERALVRQAE- 355
             +    ++L ++Y   G L+E+   + +   +     E YS+N  ID Y ER  + +AE 
Sbjct: 454  IDEFTQSALTRMYIDAGMLEESWSWFWRFHLAGHMSSECYSAN--IDAYGERGFILEAER 511

Query: 356  ---------------------------------ELFDDLRHRGTA-NEFSYAMMLCMYKR 433
                                             ++FD ++  G   ++ SY+ ++ +   
Sbjct: 512  VFVSCQEEKKCTVLEFNVMIKAYGVVKDYAKAQKIFDSMKSNGVVPDKCSYSSLIQILTG 571

Query: 434  IGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDST 613
                  A+A  +KM    L++D + ++ VI+ ++  G L+ A + +++M+   VQPD   
Sbjct: 572  ADMPAMALAYLKKMQSAGLVSDCIPYSVVISSFSKLGHLEMADKLYREMVKHGVQPDIIV 631

Query: 614  FKLL 625
            + +L
Sbjct: 632  YGVL 635



 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 1/189 (0%)
 Frame = +2

Query: 8   YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGN 187
           Y K GQL+ A   F+ M+++GV P  V F  +I+   + G + +    + +M       +
Sbjct: 326 YGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLMQKMEELQCPPD 385

Query: 188 SVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFD 367
           +  YN LI LY K   +  A   +  ++ +   P++ S   ++  YS R +V +AE+L  
Sbjct: 386 TRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYSIRHMVAEAEKLIT 445

Query: 368 DLRHRG-TANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDG 544
           ++  RG   +EF+ + +  MY   G  +++ +   + H    ++      N+ A Y   G
Sbjct: 446 EMDERGLEIDEFTQSALTRMYIDAGMLEESWSWFWRFHLAGHMSSECYSANIDA-YGERG 504

Query: 545 RLKEALETF 571
            + EA   F
Sbjct: 505 FILEAERVF 513



 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 41/183 (22%), Positives = 89/183 (48%), Gaps = 1/183 (0%)
 Frame = +2

Query: 35   AEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSVIYNSLIK 214
            A+ +F  M  +GV PD   +  LI           A+ Y+ +M++AG   + + Y+ +I 
Sbjct: 543  AQKIFDSMKSNGVVPDKCSYSSLIQILTGADMPAMALAYLKKMQSAGLVSDCIPYSVVIS 602

Query: 215  LYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRG-TA 391
             ++K+G+L+ A + Y+ +      P++     +I+ +++   V++A    + ++  G + 
Sbjct: 603  SFSKLGHLEMADKLYREMVKHGVQPDIIVYGVLINAFADAGSVKEAINYVNAMKRDGLSG 662

Query: 392  NEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETF 571
            N   Y  ++ +Y ++G   +A    + + +        S N +I LY+    +KEA E F
Sbjct: 663  NTVIYNSLIKLYTKVGYLKEAHEAYKMLEQTDDGPAIYSSNCMIDLYSERSMVKEAEEIF 722

Query: 572  KDM 580
            + +
Sbjct: 723  ESL 725



 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 47/214 (21%), Positives = 84/214 (39%), Gaps = 26/214 (12%)
 Frame = +2

Query: 8   YIKLGQLELAEGLFKEM--------------------IEDGVQPDIV-----VFGVLINA 112
           Y K G+ + AE  FK+                     +E  + P  V      +  LI+ 
Sbjct: 266 YKKAGEFQKAESFFKKWSSCNSMKYEITNKKKAASVKVESSLHPPHVSLSTYTYNTLIDT 325

Query: 113 YADVGSINKAMIYVNEMRNAGFSGNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPE 292
           Y   G + +A      M   G S  +V +N++I +    G LKE     + ++  +  P+
Sbjct: 326 YGKAGQLKEASTTFENMLKEGVSPTTVTFNTMIHICGNHGQLKEVTFLMQKMEELQCPPD 385

Query: 293 VYSSNCMIDLYSERALVRQAEELFDDLRHRGTANEF-SYAMMLCMYKRIGRFDKAVAIAR 469
             + N +I LY++   +  A   F ++   G   +  SY  +L  Y       +A  +  
Sbjct: 386 TRTYNILISLYAKHDNIDLASNYFAEMEEAGLQPDIVSYRTLLYAYSIRHMVAEAEKLIT 445

Query: 470 KMHELQLLTDPLSFNNVIALYASDGRLKEALETF 571
           +M E  L  D  + + +  +Y   G L+E+   F
Sbjct: 446 EMDERGLEIDEFTQSALTRMYIDAGMLEESWSWF 479


>ref|XP_006489493.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020-like
            [Citrus sinensis]
          Length = 864

 Score =  284 bits (727), Expect = 1e-74
 Identities = 136/216 (62%), Positives = 180/216 (83%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S+Y+KLGQLE+AE ++K+MI   V+PD+VV+G+LINA+ADVG++ +A  Y + M +AG  
Sbjct: 607  SSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYGILINAFADVGNVKQAQSYFDAMESAGLP 666

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEEL 361
             N+VIYNSLIKLYTKVGYLKEAQETYKLL+S EA P+VY+SNCMIDLYSER++VRQAEE+
Sbjct: 667  PNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEI 726

Query: 362  FDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASD 541
            F+ ++ +G ANEF+YAMML MYKR GRF++A  IA++M E  L++D LS+NNV+ LYA D
Sbjct: 727  FEIMKKKGDANEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVD 786

Query: 542  GRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            GR K+ + TFKDM+ +++QPDD TFK LG VL++ G
Sbjct: 787  GRFKDVIGTFKDMVNAAIQPDDFTFKSLGAVLMKCG 822



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 48/180 (26%), Positives = 86/180 (47%), Gaps = 1/180 (0%)
 Frame = +2

Query: 44   LFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSVIYNSLIKLYT 223
            LF  M   G  PD   +  LI   A     + A  Y+ +M+ AG   + + Y ++I  Y 
Sbjct: 551  LFDSMTSHGAVPDKCSYNSLIQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYM 610

Query: 224  KVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRG-TANEF 400
            K+G L+ A+E YK +      P+V     +I+ +++   V+QA+  FD +   G   N  
Sbjct: 611  KLGQLEMAEEVYKDMIRFNVEPDVVVYGILINAFADVGNVKQAQSYFDAMESAGLPPNAV 670

Query: 401  SYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETFKDM 580
             Y  ++ +Y ++G   +A    + +  L+   D  + N +I LY+    +++A E F+ M
Sbjct: 671  IYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIM 730



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 36/242 (14%)
 Frame = +2

Query: 8    YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGN 187
            + K  ++ +A   F +M E  ++PDIV +  L+ AY+    + +A   ++EM   G   +
Sbjct: 401  HAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEID 460

Query: 188  SVIYNSLIKLYTKVGYLKEAQETYKLLQ-SSEAGPEVYSSNCMIDLYSERALVRQAEELF 364
                ++L ++Y + G L+++   ++    + +   E YS+N  ID Y ER  V +AE  F
Sbjct: 461  EYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSAN--IDGYGERGHVLEAERAF 518

Query: 365  DDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAI--------------------------- 463
               +         + +M+  Y     +DKA  +                           
Sbjct: 519  ICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGAVPDKCSYNSLIQILAGAD 578

Query: 464  --------ARKMHELQLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDSTFK 619
                     RKM E  L++D + +  VI+ Y   G+L+ A E +KDMI  +V+PD   + 
Sbjct: 579  LPHMAKRYLRKMQEAGLVSDCIPYCAVISSYMKLGQLEMAEEVYKDMIRFNVEPDVVVYG 638

Query: 620  LL 625
            +L
Sbjct: 639  IL 640



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 1/158 (0%)
 Frame = +2

Query: 8   YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGN 187
           Y K GQL+ A   F +M+ +G+ P  V F  +I+ Y +   + +    + +M       +
Sbjct: 331 YGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLAEVDSLIKKMEELHCPPD 390

Query: 188 SVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFD 367
           +  YN LI L+ K   +  A   +  ++ +   P++ S   ++  YS R +V +AEEL  
Sbjct: 391 TRTYNILIFLHAKNDKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRRMVCEAEELIS 450

Query: 368 DLRHRG-TANEFSYAMMLCMYKRIGRFDKAVAIARKMH 478
           ++   G   +E++ + +  MY   G  +K+    R+ H
Sbjct: 451 EMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFH 488



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 23/235 (9%)
 Frame = +2

Query: 14  KLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIY-------------- 151
           K G  E A    + M E G++PD V  G+++  Y   G   KA  +              
Sbjct: 241 KGGLKEEAVCWLERMNERGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGE 300

Query: 152 -----VNEMRNAGF---SGNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSN 307
                + ++ N      S +S  YN+LI  Y K G LKEA ET+  +      P   + N
Sbjct: 301 DTKTMIGKVENGSHVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFN 360

Query: 308 CMIDLYSERALVRQAEELFDDLRH-RGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHEL 484
            MI +Y     + + + L   +       +  +Y +++ ++ +  +   A     KM E 
Sbjct: 361 TMIHIYGNNDQLAEVDSLIKKMEELHCPPDTRTYNILIFLHAKNDKISMASRYFWKMKEA 420

Query: 485 QLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            L  D +S+  ++  Y+    + EA E   +M    ++ D+ T   L  + +  G
Sbjct: 421 NLEPDIVSYRTLLYAYSIRRMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAG 475


>ref|XP_004297989.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020-like
            [Fragaria vesca subsp. vesca]
          Length = 840

 Score =  284 bits (726), Expect = 2e-74
 Identities = 135/216 (62%), Positives = 179/216 (82%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S++ KLGQLE AE ++K+M+   VQPD++VFGVLINA+A+VG + +A+ Y + M+ AGF 
Sbjct: 585  SSFAKLGQLEKAEEVYKQMVGFSVQPDVIVFGVLINAFAEVGCVKEALSYADAMKRAGFP 644

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEEL 361
            GN+VIYN+LIKLYTKVG LKEA+ETYKLL +SE GP +Y+SNCMIDLYSER +V+ AEEL
Sbjct: 645  GNTVIYNTLIKLYTKVGLLKEAEETYKLLLASEDGPAIYASNCMIDLYSERCMVKPAEEL 704

Query: 362  FDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASD 541
            FD L+ +G ANEF++AMM+CMYKR+GRF++A+ IA++M EL+LL+D LS+NNVI LYA+ 
Sbjct: 705  FDSLKSKGDANEFTFAMMVCMYKRMGRFEEAIQIAKQMRELRLLSDVLSYNNVIGLYATY 764

Query: 542  GRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            GR KE + TFK+M  + +QPD+ TFK LG VLV+ G
Sbjct: 765  GRFKEVVGTFKEMTKAGIQPDECTFKSLGLVLVKSG 800



 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 5/205 (2%)
 Frame = +2

Query: 50  KEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGF----SGNSVIYNSLIKL 217
           + M + G++PD V   +++  Y   G   KA  +  +   +      S +S  YN+LI  
Sbjct: 249 QRMTKQGMKPDEVTMAIVLQLYKKAGEYRKAEEFFEKWSESALHSHGSLSSHTYNTLIDT 308

Query: 218 YTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRH-RGTAN 394
           + K G LKEA E + L+      P   + N MI +      + + + L   +   R   +
Sbjct: 309 HGKAGRLKEASEIFALMLREGIAPTTVTFNTMIHICGNHGQLSEVDSLMQKMEEVRCPPD 368

Query: 395 EFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETFK 574
             +Y +++ ++ R    D A     KM E  L  DP+S+  ++  Y+    + +A E   
Sbjct: 369 TRTYNILISLHARHDNIDMATNYFAKMKEACLEPDPVSYRTLLYAYSVRHMVSKAEELVS 428

Query: 575 DMILSSVQPDDSTFKLLGTVLVRYG 649
           +M    ++ D+ T   L  + +  G
Sbjct: 429 EMDERGLEIDEFTHSALTRMYIEAG 453


>ref|NP_188942.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75273922|sp|Q9LS88.1|PP250_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At3g23020 gi|9294191|dbj|BAB02093.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|332643185|gb|AEE76706.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 842

 Score =  283 bits (725), Expect = 2e-74
 Identities = 135/219 (61%), Positives = 182/219 (83%), Gaps = 3/219 (1%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S+++KLGQL +AE ++KEM+E  ++PD+VV+GVLINA+AD G++ +AM YV  M+ AG  
Sbjct: 583  SSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIP 642

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETY-KLLQSSEAG--PEVYSSNCMIDLYSERALVRQA 352
            GNSVIYNSLIKLYTKVGYL EA+  Y KLLQS      P+VY+SNCMI+LYSER++VR+A
Sbjct: 643  GNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKA 702

Query: 353  EELFDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALY 532
            E +FD ++ RG ANEF++AMMLCMYK+ GRF++A  IA++M E+++LTDPLS+N+V+ L+
Sbjct: 703  EAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLF 762

Query: 533  ASDGRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            A DGR KEA+ETFK+M+ S +QPDDSTFK LGT+L++ G
Sbjct: 763  ALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLG 801



 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 45/202 (22%), Positives = 93/202 (46%), Gaps = 6/202 (2%)
 Frame = +2

Query: 53  EMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMR------NAGFSGNSVIYNSLIK 214
           +M + G+QPD V  G+++  Y       KA  +  +        ++    +S  YN++I 
Sbjct: 247 KMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMID 306

Query: 215 LYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRGTAN 394
            Y K G +KEA ET+K +      P   + N MI +Y     + +   L   ++     +
Sbjct: 307 TYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPD 366

Query: 395 EFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETFK 574
             +Y +++ ++ +    ++A A  ++M +  L  DP+S+  ++  ++    ++EA     
Sbjct: 367 TRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIA 426

Query: 575 DMILSSVQPDDSTFKLLGTVLV 640
           +M   +V+ D+ T   L  + V
Sbjct: 427 EMDDDNVEIDEYTQSALTRMYV 448



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 54/244 (22%), Positives = 104/244 (42%), Gaps = 34/244 (13%)
 Frame = +2

Query: 8    YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGN 187
            Y K GQ++ A   FK M+E+G+ P  V F  +I+ Y + G + +    +  M+    + +
Sbjct: 308  YGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMK-LHCAPD 366

Query: 188  SVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFD 367
            +  YN LI L+TK   ++ A   +K ++     P+  S   ++  +S R +V +AE L  
Sbjct: 367  TRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIA 426

Query: 368  DLRHRGT-ANEFSYAMMLCMYKRIGRFDKAVAIARKMH------------------ELQL 490
            ++       +E++ + +  MY      +K+ +  ++ H                  E   
Sbjct: 427  EMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGY 486

Query: 491  LTDP---------------LSFNNVIALYASDGRLKEALETFKDMILSSVQPDDSTFKLL 625
            L++                + +N +I  Y      ++A E F+ M+   V PD  T+  L
Sbjct: 487  LSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTL 546

Query: 626  GTVL 637
              +L
Sbjct: 547  VQIL 550



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 54/244 (22%), Positives = 102/244 (41%), Gaps = 36/244 (14%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S + K   +E A   FKEM +DG++PD V +  L+ A++    + +A   + EM +    
Sbjct: 375  SLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVE 434

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQ-SSEAGPEVYSSNCMIDLYSERALVRQAEE 358
             +    ++L ++Y +   L+++   +K    +     E YS+N  ID Y ER  + +AE 
Sbjct: 435  IDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSAN--IDAYGERGYLSEAER 492

Query: 359  LFDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIAL--- 529
            +F   +         Y +M+  Y      +KA  +   M    +  D  ++N ++ +   
Sbjct: 493  VFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILAS 552

Query: 530  ------------------YASD--------------GRLKEALETFKDMILSSVQPDDST 613
                              Y SD              G+L  A E +K+M+  +++PD   
Sbjct: 553  ADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVV 612

Query: 614  FKLL 625
            + +L
Sbjct: 613  YGVL 616


>ref|XP_006420082.1| hypothetical protein CICLE_v10004292mg [Citrus clementina]
            gi|557521955|gb|ESR33322.1| hypothetical protein
            CICLE_v10004292mg [Citrus clementina]
          Length = 864

 Score =  283 bits (724), Expect = 3e-74
 Identities = 136/216 (62%), Positives = 179/216 (82%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S+Y+KLGQLE+AE ++K+MI   V+PD+VV+GVLINA+ADVG++ +A  Y + M ++G  
Sbjct: 607  SSYVKLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESSGLP 666

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEEL 361
             N+VIYNSLIKLYTKVGYLKEAQETYKLL+S EA P+VY+SNCMIDLYSER++VRQAEE+
Sbjct: 667  PNAVIYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEI 726

Query: 362  FDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASD 541
            F+ ++ +G  NEF+YAMML MYKR GRF++A  IA++M E  L++D LS+NNV+ LYA D
Sbjct: 727  FEIMKKKGDTNEFTYAMMLIMYKRNGRFEEATRIAKQMRESGLISDLLSYNNVLGLYAVD 786

Query: 542  GRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            GR K+ + TFKDM+ ++VQPDD TFK LG VL++ G
Sbjct: 787  GRFKDVIGTFKDMVNAAVQPDDFTFKSLGAVLMKCG 822



 Score = 77.0 bits (188), Expect = 5e-12
 Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
 Frame = +2

Query: 44   LFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSVIYNSLIKLYT 223
            LF  M   GV PD   +  L+   A     + A  Y+ +M+ AG   + + Y ++I  Y 
Sbjct: 551  LFDSMTSHGVVPDKCSYNSLVQILAGADLPHMAKRYLRKMQEAGLVSDCIPYCAVISSYV 610

Query: 224  KVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRG-TANEF 400
            K+G L+ A+E YK +      P+V     +I+ +++   V+QA+  FD +   G   N  
Sbjct: 611  KLGQLEMAEEVYKDMIRFNVEPDVVVYGVLINAFADVGNVKQAQSYFDAMESSGLPPNAV 670

Query: 401  SYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETFKDM 580
             Y  ++ +Y ++G   +A    + +  L+   D  + N +I LY+    +++A E F+ M
Sbjct: 671  IYNSLIKLYTKVGYLKEAQETYKLLRSLEASPDVYTSNCMIDLYSERSMVRQAEEIFEIM 730



 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 36/242 (14%)
 Frame = +2

Query: 8    YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGN 187
            + K  ++ +A   F +M E  ++PDIV +  L+ AY+    + +A   ++EM   G   +
Sbjct: 401  HAKNNKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRCMVCEAEELISEMDGGGLEID 460

Query: 188  SVIYNSLIKLYTKVGYLKEAQETYKLLQ-SSEAGPEVYSSNCMIDLYSERALVRQAEELF 364
                ++L ++Y + G L+++   ++    + +   E YS+N  ID Y ER  V +AE  F
Sbjct: 461  EYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSEGYSAN--IDAYGERGHVLEAERAF 518

Query: 365  DDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAI--------------------------- 463
               +         + +M+  Y     +DKA  +                           
Sbjct: 519  ICCQEGKKLTVLVFNVMVKAYGMGRNYDKACNLFDSMTSHGVVPDKCSYNSLVQILAGAD 578

Query: 464  --------ARKMHELQLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDSTFK 619
                     RKM E  L++D + +  VI+ Y   G+L+ A E +KDMI  +V+PD   + 
Sbjct: 579  LPHMAKRYLRKMQEAGLVSDCIPYCAVISSYVKLGQLEMAEEVYKDMIRFNVEPDVVVYG 638

Query: 620  LL 625
            +L
Sbjct: 639  VL 640



 Score = 65.9 bits (159), Expect = 1e-08
 Identities = 46/189 (24%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
 Frame = +2

Query: 8   YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGN 187
           Y K GQL+ A   F +M+ +G+ P  V F  +I+ Y +   + +    + +M       +
Sbjct: 331 YGKAGQLKEASETFAQMLREGIVPTTVTFNTMIHIYGNNDQLVEVDSLIKKMEELRCPPD 390

Query: 188 SVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFD 367
           +  YN LI L+ K   +  A   +  ++ +   P++ S   ++  YS R +V +AEEL  
Sbjct: 391 TRTYNILIFLHAKNNKISMASRYFWKMKEANLEPDIVSYRTLLYAYSIRCMVCEAEELIS 450

Query: 368 DLRHRG-TANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDG 544
           ++   G   +E++ + +  MY   G  +K+    R+ H    ++    ++  I  Y   G
Sbjct: 451 EMDGGGLEIDEYTQSALTRMYIEAGMLEKSWLWFRRFHLAGDMSSE-GYSANIDAYGERG 509

Query: 545 RLKEALETF 571
            + EA   F
Sbjct: 510 HVLEAERAF 518



 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 23/235 (9%)
 Frame = +2

Query: 14  KLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKA----------------- 142
           K G  E A    + M E G++PD V  G+++  Y   G   KA                 
Sbjct: 241 KGGLKEEAVCWLERMNERGMEPDEVTMGIVVQMYKKAGEFQKAEEFFKKWSSRESLRHGE 300

Query: 143 --MIYVNEMRNAGF---SGNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSN 307
              + + ++ N      S +S  YN+LI  Y K G LKEA ET+  +      P   + N
Sbjct: 301 DTKMMIGKVENGSQVNGSLSSYTYNTLIDTYGKAGQLKEASETFAQMLREGIVPTTVTFN 360

Query: 308 CMIDLYSERALVRQAEELFDDLRH-RGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHEL 484
            MI +Y     + + + L   +   R   +  +Y +++ ++ +  +   A     KM E 
Sbjct: 361 TMIHIYGNNDQLVEVDSLIKKMEELRCPPDTRTYNILIFLHAKNNKISMASRYFWKMKEA 420

Query: 485 QLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            L  D +S+  ++  Y+    + EA E   +M    ++ D+ T   L  + +  G
Sbjct: 421 NLEPDIVSYRTLLYAYSIRCMVCEAEELISEMDGGGLEIDEYTQSALTRMYIEAG 475


>ref|XP_007148598.1| hypothetical protein PHAVU_006G222000g [Phaseolus vulgaris]
            gi|561021821|gb|ESW20592.1| hypothetical protein
            PHAVU_006G222000g [Phaseolus vulgaris]
          Length = 804

 Score =  280 bits (716), Expect = 3e-73
 Identities = 132/215 (61%), Positives = 172/215 (80%)
 Frame = +2

Query: 5    NYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSG 184
            +++KLGQL++AE L++EM+   VQPD++++GV INA+AD GS+ +A+ YVNEM+ AG  G
Sbjct: 550  SFVKLGQLKMAEELYEEMLGYAVQPDVIIYGVFINAFADTGSVKEAINYVNEMQKAGLQG 609

Query: 185  NSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELF 364
            N  IYNSLIKLYTKVGYLKEA+ETYKLLQSS  GP ++SSNCMIDLY+ER +V QA+E+F
Sbjct: 610  NLTIYNSLIKLYTKVGYLKEAEETYKLLQSSGEGPSIFSSNCMIDLYTERLMVEQAKEIF 669

Query: 365  DDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDG 544
            + L+    ANEFSYAMMLCMYK+IGR D+A+ IA +M  L LLTD LS+NNV+ LY+ D 
Sbjct: 670  ESLKKNEVANEFSYAMMLCMYKKIGRLDEAIQIATQMRRLALLTDVLSYNNVLGLYSMDR 729

Query: 545  RLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            RL++A ETF +MI S +QPDD TF+ L  +L+  G
Sbjct: 730  RLRDATETFNEMIKSGIQPDDFTFRALANILLNCG 764



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 1/191 (0%)
 Frame = +2

Query: 2   SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
           + Y K GQ       F  MI  G+  + V   ++I+ Y + G + +A +   +M      
Sbjct: 271 NTYGKGGQFRAVCETFARMIRQGIALNTVTLNLMIHLYGNCGRLQQACLLFQKMGEFRCL 330

Query: 182 GNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEEL 361
            ++  YN LI  + K   +  A +    ++ +   P++ S   ++  YS R +V++AEEL
Sbjct: 331 PDTWTYNILISAHIKNNNVNIAAKYLARMKQACLEPDILSYRILLYAYSTRKMVQEAEEL 390

Query: 362 FDDLRHRGTA-NEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYAS 538
             ++  R  A +EF+ + +  MY   G  +++     + H    ++      N+ A Y  
Sbjct: 391 VREMDARNLAIDEFTQSALTRMYVESGMLEQSWLWFTRFHIAGYISSGCYSANIDA-YGE 449

Query: 539 DGRLKEALETF 571
            G   EA + F
Sbjct: 450 RGYTLEAEKVF 460


>ref|XP_007148597.1| hypothetical protein PHAVU_006G222000g [Phaseolus vulgaris]
            gi|561021820|gb|ESW20591.1| hypothetical protein
            PHAVU_006G222000g [Phaseolus vulgaris]
          Length = 661

 Score =  280 bits (716), Expect = 3e-73
 Identities = 132/215 (61%), Positives = 172/215 (80%)
 Frame = +2

Query: 5    NYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSG 184
            +++KLGQL++AE L++EM+   VQPD++++GV INA+AD GS+ +A+ YVNEM+ AG  G
Sbjct: 407  SFVKLGQLKMAEELYEEMLGYAVQPDVIIYGVFINAFADTGSVKEAINYVNEMQKAGLQG 466

Query: 185  NSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELF 364
            N  IYNSLIKLYTKVGYLKEA+ETYKLLQSS  GP ++SSNCMIDLY+ER +V QA+E+F
Sbjct: 467  NLTIYNSLIKLYTKVGYLKEAEETYKLLQSSGEGPSIFSSNCMIDLYTERLMVEQAKEIF 526

Query: 365  DDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDG 544
            + L+    ANEFSYAMMLCMYK+IGR D+A+ IA +M  L LLTD LS+NNV+ LY+ D 
Sbjct: 527  ESLKKNEVANEFSYAMMLCMYKKIGRLDEAIQIATQMRRLALLTDVLSYNNVLGLYSMDR 586

Query: 545  RLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            RL++A ETF +MI S +QPDD TF+ L  +L+  G
Sbjct: 587  RLRDATETFNEMIKSGIQPDDFTFRALANILLNCG 621



 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 45/191 (23%), Positives = 85/191 (44%), Gaps = 1/191 (0%)
 Frame = +2

Query: 2   SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
           + Y K GQ       F  MI  G+  + V   ++I+ Y + G + +A +   +M      
Sbjct: 128 NTYGKGGQFRAVCETFARMIRQGIALNTVTLNLMIHLYGNCGRLQQACLLFQKMGEFRCL 187

Query: 182 GNSVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEEL 361
            ++  YN LI  + K   +  A +    ++ +   P++ S   ++  YS R +V++AEEL
Sbjct: 188 PDTWTYNILISAHIKNNNVNIAAKYLARMKQACLEPDILSYRILLYAYSTRKMVQEAEEL 247

Query: 362 FDDLRHRGTA-NEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYAS 538
             ++  R  A +EF+ + +  MY   G  +++     + H    ++      N+ A Y  
Sbjct: 248 VREMDARNLAIDEFTQSALTRMYVESGMLEQSWLWFTRFHIAGYISSGCYSANIDA-YGE 306

Query: 539 DGRLKEALETF 571
            G   EA + F
Sbjct: 307 RGYTLEAEKVF 317


>ref|XP_006300104.1| hypothetical protein CARUB_v10016333mg [Capsella rubella]
            gi|482568813|gb|EOA33002.1| hypothetical protein
            CARUB_v10016333mg [Capsella rubella]
          Length = 850

 Score =  278 bits (711), Expect = 1e-72
 Identities = 133/219 (60%), Positives = 182/219 (83%), Gaps = 3/219 (1%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S+++KLGQL +AE ++KEM+E  ++PD+VVFGVLINA+AD G++ +AM YV  M+ AG  
Sbjct: 591  SSFVKLGQLNMAEEVYKEMVEYYIEPDVVVFGVLINAFADTGNVQQAMSYVEAMKKAGIP 650

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETYK-LLQSSEAG--PEVYSSNCMIDLYSERALVRQA 352
            GNSVI+NSLIKLYTKVGYL EA+  Y+ LLQS      P+VY+SNCMI+LYSER++VR+A
Sbjct: 651  GNSVIHNSLIKLYTKVGYLNEAEAIYRELLQSCNKAQYPDVYTSNCMINLYSERSMVRKA 710

Query: 353  EELFDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALY 532
            E +F++++ R  ANEF++AMMLCMYK+ GRF++A  IA++M E+++LTDPLS+N+V+ LY
Sbjct: 711  EAIFENMKQRREANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLY 770

Query: 533  ASDGRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            A DGR KEA+ETFK+M+ S +QPDDSTFK LGT+L++ G
Sbjct: 771  ALDGRFKEAVETFKEMVSSGLQPDDSTFKSLGTILMKLG 809



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 46/183 (25%), Positives = 91/183 (49%), Gaps = 4/183 (2%)
 Frame = +2

Query: 44   LFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSVIYNSLIKLYT 223
            LF+ M+  GV PD   +  L+   A     +KA  Y+ +MR  G+  + + Y ++I  + 
Sbjct: 535  LFESMMCYGVTPDKCTYNTLVQILASADMPHKARCYLEKMRETGYVSDCIPYCAVISSFV 594

Query: 224  KVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRG-TANEF 400
            K+G L  A+E YK +      P+V     +I+ +++   V+QA    + ++  G   N  
Sbjct: 595  KLGQLNMAEEVYKEMVEYYIEPDVVVFGVLINAFADTGNVQQAMSYVEAMKKAGIPGNSV 654

Query: 401  SYAMMLCMYKRIGRFDKAVAIARKMHE---LQLLTDPLSFNNVIALYASDGRLKEALETF 571
             +  ++ +Y ++G  ++A AI R++ +        D  + N +I LY+    +++A   F
Sbjct: 655  IHNSLIKLYTKVGYLNEAEAIYRELLQSCNKAQYPDVYTSNCMINLYSERSMVRKAEAIF 714

Query: 572  KDM 580
            ++M
Sbjct: 715  ENM 717



 Score = 63.9 bits (154), Expect = 4e-08
 Identities = 46/211 (21%), Positives = 93/211 (44%), Gaps = 15/211 (7%)
 Frame = +2

Query: 53  EMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSG---------------N 187
           +M + G+QPD V  G+++  Y       KA  +  +       G               +
Sbjct: 246 KMSKIGMQPDEVTTGIVLQMYKKAKEFQKAEEFFKKWSCDKSFGMLSMTDNKVDSHVCLS 305

Query: 188 SVIYNSLIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFD 367
           S  YN++I  Y K G +KEA ET+K +      P   + N MI +Y     + +   L  
Sbjct: 306 SYTYNTMIDTYGKSGQIKEALETFKRMLDEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMK 365

Query: 368 DLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGR 547
            ++     +  +Y +++ ++ +    ++A A  ++M +  L  DP+S+  ++  ++    
Sbjct: 366 TMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDAGLKPDPVSYRTLLYAFSIRHM 425

Query: 548 LKEALETFKDMILSSVQPDDSTFKLLGTVLV 640
           ++EA     +M  ++V+ D+ T   L  + V
Sbjct: 426 VEEAEGLIAEMDDNNVEIDEYTQSALTRMYV 456



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 1/201 (0%)
 Frame = +2

Query: 26   LELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSVIYNS 205
            +E AEGL  EM ++ V+ D      L   Y +   + K+  +      AG + +S  Y++
Sbjct: 426  VEEAEGLIAEMDDNNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHIAG-NMSSEGYSA 484

Query: 206  LIKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRG 385
             I  Y + GY+ EA+  +   Q       V   N MI  Y       +A  LF+ +   G
Sbjct: 485  NIDAYGERGYISEAERVFICCQEVNKRT-VIEYNVMIKAYGISKSCEKACVLFESMMCYG 543

Query: 386  -TANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEAL 562
             T ++ +Y  ++ +        KA     KM E   ++D + +  VI+ +   G+L  A 
Sbjct: 544  VTPDKCTYNTLVQILASADMPHKARCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAE 603

Query: 563  ETFKDMILSSVQPDDSTFKLL 625
            E +K+M+   ++PD   F +L
Sbjct: 604  EVYKEMVEYYIEPDVVVFGVL 624



 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 50/244 (20%), Positives = 96/244 (39%), Gaps = 34/244 (13%)
 Frame = +2

Query: 8    YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGS------------------- 130
            Y K GQ++ A   FK M+++G+ P  V F  +I+ Y + G                    
Sbjct: 316  YGKSGQIKEALETFKRMLDEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDT 375

Query: 131  ---------------INKAMIYVNEMRNAGFSGNSVIYNSLIKLYTKVGYLKEAQETYKL 265
                           I +A  Y  EM++AG   + V Y +L+  ++    ++EA+     
Sbjct: 376  RTYNILISLHTKNNDIERAGAYFKEMKDAGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAE 435

Query: 266  LQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRGTANEFSYAMMLCMYKRIGRF 445
            +  +    + Y+ + +  +Y E  ++ ++   F      G  +   Y+  +  Y   G  
Sbjct: 436  MDDNNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHIAGNMSSEGYSANIDAYGERGYI 495

Query: 446  DKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDSTFKLL 625
             +A  +     E+   T  + +N +I  Y      ++A   F+ M+   V PD  T+  L
Sbjct: 496  SEAERVFICCQEVNKRT-VIEYNVMIKAYGISKSCEKACVLFESMMCYGVTPDKCTYNTL 554

Query: 626  GTVL 637
              +L
Sbjct: 555  VQIL 558


>ref|XP_002885540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297331380|gb|EFH61799.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 841

 Score =  275 bits (704), Expect = 7e-72
 Identities = 131/219 (59%), Positives = 180/219 (82%), Gaps = 3/219 (1%)
 Frame = +2

Query: 2    SNYIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFS 181
            S+++KLGQL +AE ++KEM+E  ++PD+VV+GVLINA+AD G++ +AM YV  M+ AG  
Sbjct: 582  SSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIP 641

Query: 182  GNSVIYNSLIKLYTKVGYLKEAQETY-KLLQSSEAG--PEVYSSNCMIDLYSERALVRQA 352
             NSVIYNSLIKLYTKVGYL EA+  Y KLL+S      P+VY+SNCMI+LYS+R++VR+A
Sbjct: 642  ENSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQYPDVYTSNCMINLYSQRSMVRKA 701

Query: 353  EELFDDLRHRGTANEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALY 532
            E +F+ ++ R  ANEF++AMMLCMYK+ GRF++A  IA++M E+++LTDPLS+N+V+ LY
Sbjct: 702  EAIFESMKQRREANEFTFAMMLCMYKKNGRFEEATQIAKQMREMRILTDPLSYNSVLGLY 761

Query: 533  ASDGRLKEALETFKDMILSSVQPDDSTFKLLGTVLVRYG 649
            A DGR KEA+ETFK+M+ S +QPDDSTFK LGT+L++ G
Sbjct: 762  ALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILIKLG 800



 Score = 80.9 bits (198), Expect = 3e-13
 Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 5/189 (2%)
 Frame = +2

Query: 29   ELAEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSVIYNSL 208
            E A  LF+ M+  GV PD   +  L+   A     +KA  Y+ +MR  G+  + + Y ++
Sbjct: 521  EKACELFESMMSYGVTPDKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAV 580

Query: 209  IKLYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRG- 385
            I  + K+G L  A+E YK +      P+V     +I+ +++   V+QA    + ++  G 
Sbjct: 581  ISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI 640

Query: 386  TANEFSYAMMLCMYKRIGRFDKAVAIARKM----HELQLLTDPLSFNNVIALYASDGRLK 553
              N   Y  ++ +Y ++G  D+A AI RK+    +E Q   D  + N +I LY+    ++
Sbjct: 641  PENSVIYNSLIKLYTKVGYLDEAEAIYRKLLRSCNETQ-YPDVYTSNCMINLYSQRSMVR 699

Query: 554  EALETFKDM 580
            +A   F+ M
Sbjct: 700  KAEAIFESM 708



 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 55/244 (22%), Positives = 98/244 (40%), Gaps = 34/244 (13%)
 Frame = +2

Query: 8    YIKLGQLELAEGLFKEMIEDGVQPDIVVFGVLINAYADVG-------------------- 127
            Y K GQ++ A   FK M+E+G+ P  V F  +I+ Y + G                    
Sbjct: 307  YGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLMKTMKFHCAPDT 366

Query: 128  --------------SINKAMIYVNEMRNAGFSGNSVIYNSLIKLYTKVGYLKEAQETYKL 265
                           I +A  Y  EM+ AG   + V Y +L+  ++    +KEA+E    
Sbjct: 367  RTYNILISLHTKNNDIERAGTYFKEMKGAGLKPDPVSYRTLLYAFSIRHMVKEAEELIAE 426

Query: 266  LQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRGTANEFSYAMMLCMYKRIGRF 445
            +  ++   + Y+ + +  +Y E  ++ ++   F      G  +   Y+  +  Y   G  
Sbjct: 427  MDDNDVEIDEYTQSALTRMYIEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYL 486

Query: 446  DKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETFKDMILSSVQPDDSTFKLL 625
             +A  +     E+   T  L +N +I  Y      ++A E F+ M+   V PD  T+  L
Sbjct: 487  SEAERVFICCQEVNKRT-VLEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTL 545

Query: 626  GTVL 637
              +L
Sbjct: 546  VQIL 549



 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 44/193 (22%), Positives = 88/193 (45%), Gaps = 6/193 (3%)
 Frame = +2

Query: 53  EMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMR------NAGFSGNSVIYNSLIK 214
           +M + G+QPD V  G+++  Y       KA  +  +        ++    +S  YN++I 
Sbjct: 246 KMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMID 305

Query: 215 LYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRGTAN 394
            Y K G +KEA ET+K +      P   + N MI +Y       +   L   ++     +
Sbjct: 306 TYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHVYGNNGQFGEVTSLMKTMKFHCAPD 365

Query: 395 EFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETFK 574
             +Y +++ ++ +    ++A    ++M    L  DP+S+  ++  ++    +KEA E   
Sbjct: 366 TRTYNILISLHTKNNDIERAGTYFKEMKGAGLKPDPVSYRTLLYAFSIRHMVKEAEELIA 425

Query: 575 DMILSSVQPDDST 613
           +M  + V+ D+ T
Sbjct: 426 EMDDNDVEIDEYT 438



 Score = 63.2 bits (152), Expect = 7e-08
 Identities = 52/198 (26%), Positives = 90/198 (45%), Gaps = 1/198 (0%)
 Frame = +2

Query: 35   AEGLFKEMIEDGVQPDIVVFGVLINAYADVGSINKAMIYVNEMRNAGFSGNSVIYNSLIK 214
            AE L  EM ++ V+ D      L   Y +   + K+  +      AG + +S  Y++ I 
Sbjct: 420  AEELIAEMDDNDVEIDEYTQSALTRMYIEAEMLEKSWSWFKRFHVAG-NMSSEGYSANID 478

Query: 215  LYTKVGYLKEAQETYKLLQSSEAGPEVYSSNCMIDLYSERALVRQAEELFDDLRHRG-TA 391
             Y + GYL EA+  +   Q       V   N MI  Y       +A ELF+ +   G T 
Sbjct: 479  AYGERGYLSEAERVFICCQEVNKRT-VLEYNVMIKAYGISKSCEKACELFESMMSYGVTP 537

Query: 392  NEFSYAMMLCMYKRIGRFDKAVAIARKMHELQLLTDPLSFNNVIALYASDGRLKEALETF 571
            ++ +Y  ++ +       DKA     KM E   ++D + +  VI+ +   G+L  A E +
Sbjct: 538  DKCTYNTLVQILASADMPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVY 597

Query: 572  KDMILSSVQPDDSTFKLL 625
            K+M+  +++PD   + +L
Sbjct: 598  KEMVEYNIEPDVVVYGVL 615