BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00022848
         (372 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007220255.1| hypothetical protein PRUPE_ppa001444mg [Prun...   104   1e-20
ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
ref|XP_006432351.1| hypothetical protein CICLE_v10000307mg [Citr...    96   7e-18
ref|XP_002303960.2| hypothetical protein POPTR_0003s19010g [Popu...    91   1e-16
ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
emb|CBI40653.3| unnamed protein product [Vitis vinifera]               91   2e-16
ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
ref|NP_172596.1| pentatricopeptide repeat-containing protein [Ar...    88   4e-16
ref|XP_004499782.1| PREDICTED: pentatricopeptide repeat-containi...    89   8e-16
ref|XP_007148792.1| hypothetical protein PHAVU_005G014700g [Phas...    88   1e-15
ref|XP_002892635.1| pentatricopeptide repeat-containing protein ...    88   1e-15
gb|EXB44298.1| hypothetical protein L484_012217 [Morus notabilis]      87   2e-15
ref|XP_006304494.1| hypothetical protein CARUB_v10011264mg [Caps...    87   2e-15
ref|XP_004308197.1| PREDICTED: pentatricopeptide repeat-containi...    87   3e-15
ref|XP_006393717.1| hypothetical protein EUTSA_v10011247mg [Eutr...    86   4e-15
ref|XP_004233812.1| PREDICTED: pentatricopeptide repeat-containi...    86   5e-15
ref|XP_006347159.1| PREDICTED: pentatricopeptide repeat-containi...    86   7e-15
ref|XP_007010747.1| Pentatricopeptide repeat (PPR) superfamily p...    85   1e-14
ref|XP_002525566.1| pentatricopeptide repeat-containing protein,...    84   2e-14

>ref|XP_007220255.1| hypothetical protein PRUPE_ppa001444mg [Prunus persica]
           gi|462416717|gb|EMJ21454.1| hypothetical protein
           PRUPE_ppa001444mg [Prunus persica]
          Length = 827

 Score =  104 bits (260), Expect = 1e-20
 Identities = 52/98 (53%), Positives = 72/98 (73%), Gaps = 4/98 (4%)
 Frame = -1

Query: 288 TTLMPFSSS----SLTCSKSRPSTSLPVLLHTQKGQPTKSSHTLSQRVYIPSHVYTHPSA 121
           T L+P ++S     LT S++RP  S P           ++ HTLSQR +IPSHVYTHP+A
Sbjct: 9   TALLPITNSITPPPLTPSRARPPISAPQF---------QAFHTLSQRTHIPSHVYTHPAA 59

Query: 120 LLLEICSHVEEVRRILPLVIKSGLYNEHLFQTKLISLF 7
           +LLE+C+ ++E+ +I+PL+IK+GLYNEHLFQTKL+SLF
Sbjct: 60  ILLELCTSIKELNQIIPLIIKNGLYNEHLFQTKLVSLF 97


>ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 50/91 (54%), Positives = 65/91 (71%)
 Frame = -1

Query: 276 PFSSSSLTCSKSRPSTSLPVLLHTQKGQPTKSSHTLSQRVYIPSHVYTHPSALLLEICSH 97
           P  SSS+T     PS+ LP              HTLS+R +IPSHVY HP+A+LLE+C+ 
Sbjct: 19  PLKSSSITI----PSSPLPF-------------HTLSERAHIPSHVYKHPAAVLLELCTS 61

Query: 96  VEEVRRILPLVIKSGLYNEHLFQTKLISLFS 4
           ++E+ +I+PLVIK+GLYNEHLFQTKL+SLFS
Sbjct: 62  MKELHQIIPLVIKNGLYNEHLFQTKLVSLFS 92


>ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 50/91 (54%), Positives = 65/91 (71%)
 Frame = -1

Query: 276 PFSSSSLTCSKSRPSTSLPVLLHTQKGQPTKSSHTLSQRVYIPSHVYTHPSALLLEICSH 97
           P  SSS+T     PS+ LP              HTLS+R +IPSHVY HP+A+LLE+C+ 
Sbjct: 19  PLKSSSITI----PSSPLPF-------------HTLSERAHIPSHVYKHPAAVLLELCTS 61

Query: 96  VEEVRRILPLVIKSGLYNEHLFQTKLISLFS 4
           ++E+ +I+PLVIK+GLYNEHLFQTKL+SLFS
Sbjct: 62  MKELHQIIPLVIKNGLYNEHLFQTKLVSLFS 92


>ref|XP_006432351.1| hypothetical protein CICLE_v10000307mg [Citrus clementina]
           gi|568883789|ref|XP_006494628.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g11290-like isoform X1 [Citrus sinensis]
           gi|568883791|ref|XP_006494629.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g11290-like isoform X2 [Citrus sinensis]
           gi|568883793|ref|XP_006494630.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g11290-like isoform X3 [Citrus sinensis]
           gi|568883795|ref|XP_006494631.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g11290-like isoform X4 [Citrus sinensis]
           gi|557534473|gb|ESR45591.1| hypothetical protein
           CICLE_v10000307mg [Citrus clementina]
          Length = 812

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 51/88 (57%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
 Frame = -1

Query: 267 SSSLTCSKSRPSTSLPV-LLHTQKGQPTKSSHTLSQRVYIPSHVYTHPSALLLEICSHVE 91
           SS   C  S  + S P   LH  K       HTLSQR YIPS +Y HPSALLLE+C+ ++
Sbjct: 2   SSHSQCQLSVFTNSTPTQTLHEHK-------HTLSQRAYIPSRIYRHPSALLLEVCTSLK 54

Query: 90  EVRRILPLVIKSGLYNEHLFQTKLISLF 7
           E+RRILPL+IKSGL ++HLFQTKL+SLF
Sbjct: 55  ELRRILPLIIKSGLCDQHLFQTKLVSLF 82


>ref|XP_002303960.2| hypothetical protein POPTR_0003s19010g [Populus trichocarpa]
           gi|550343509|gb|EEE78939.2| hypothetical protein
           POPTR_0003s19010g [Populus trichocarpa]
          Length = 812

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 45/77 (58%), Positives = 57/77 (74%)
 Frame = -1

Query: 237 PSTSLPVLLHTQKGQPTKSSHTLSQRVYIPSHVYTHPSALLLEICSHVEEVRRILPLVIK 58
           P T+ P      K  P  + HTLSQR +IPSH+Y HP+A+LLE+C+  +EV +ILP +IK
Sbjct: 7   PFTATPPPQIPSKASPL-AQHTLSQRTHIPSHIYKHPAAILLELCTSSKEVHQILPQIIK 65

Query: 57  SGLYNEHLFQTKLISLF 7
           +GLYNE LFQTKLISLF
Sbjct: 66  NGLYNETLFQTKLISLF 82


>ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 40/61 (65%), Positives = 53/61 (86%)
 Frame = -1

Query: 189 TKSSHTLSQRVYIPSHVYTHPSALLLEICSHVEEVRRILPLVIKSGLYNEHLFQTKLISL 10
           T ++  L QR++IPSHVY HPSA+LLE+C+ ++E+ +ILPL+IK+G YNEHLFQTKLISL
Sbjct: 26  TTTTTPLYQRIFIPSHVYRHPSAILLELCTSLKELHQILPLIIKNGFYNEHLFQTKLISL 85

Query: 9   F 7
           F
Sbjct: 86  F 86


>emb|CBI40653.3| unnamed protein product [Vitis vinifera]
          Length = 597

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 46/86 (53%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
 Frame = -1

Query: 261 SLTCSKSRPSTSLPVLLHTQKGQPTKSSH-TLSQRVYIPSHVYTHPSALLLEICSHVEEV 85
           S T  +  P+ +LP L       PT + H T S R YIPSHVY HPSA+LLE+C+ ++E+
Sbjct: 41  SFTPLRRIPTNTLP-LPPPPPPSPTSNLHRTPSSRTYIPSHVYKHPSAILLELCTSMKEL 99

Query: 84  RRILPLVIKSGLYNEHLFQTKLISLF 7
            + +PL+IK+GLY+EHLFQTKL+SLF
Sbjct: 100 HQFIPLIIKNGLYSEHLFQTKLVSLF 125


>ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 46/86 (53%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
 Frame = -1

Query: 261 SLTCSKSRPSTSLPVLLHTQKGQPTKSSH-TLSQRVYIPSHVYTHPSALLLEICSHVEEV 85
           S T  +  P+ +LP L       PT + H T S R YIPSHVY HPSA+LLE+C+ ++E+
Sbjct: 35  SFTPLRRIPTNTLP-LPPPPPPSPTSNLHRTPSSRTYIPSHVYKHPSAILLELCTSMKEL 93

Query: 84  RRILPLVIKSGLYNEHLFQTKLISLF 7
            + +PL+IK+GLY+EHLFQTKL+SLF
Sbjct: 94  HQFIPLIIKNGLYSEHLFQTKLVSLF 119


>ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g11290 gi|332190592|gb|AEE28713.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score = 88.2 bits (217), Expect(2) = 4e-16
 Identities = 40/62 (64%), Positives = 52/62 (83%)
 Frame = -1

Query: 192 PTKSSHTLSQRVYIPSHVYTHPSALLLEICSHVEEVRRILPLVIKSGLYNEHLFQTKLIS 13
           P++  H LS+R YIP++VY HP+ALLLE CS ++E+R+ILPLV K+GLY EH FQTKL+S
Sbjct: 18  PSRHRHFLSERNYIPANVYEHPAALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVS 77

Query: 12  LF 7
           LF
Sbjct: 78  LF 79



 Score = 21.9 bits (45), Expect(2) = 4e-16
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -2

Query: 227 LFQYFFTPKRANPPNLHTH 171
           L Q+   P+  NPP+ H H
Sbjct: 5   LVQFSTVPQIPNPPSRHRH 23


>ref|XP_004499782.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cicer arietinum]
          Length = 814

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 44/79 (55%), Positives = 59/79 (74%), Gaps = 10/79 (12%)
 Frame = -1

Query: 213 LHTQKGQPTKSSHTLS----------QRVYIPSHVYTHPSALLLEICSHVEEVRRILPLV 64
           LHT    P  S++T+S          QR++IP+HVY HPSA+LLE+C+ ++E+ +ILPL+
Sbjct: 8   LHTS---PPLSNNTISKTKPKTTPSYQRIFIPTHVYRHPSAILLELCTSMKELHQILPLI 64

Query: 63  IKSGLYNEHLFQTKLISLF 7
           IK+G YNEHLFQTKLISLF
Sbjct: 65  IKNGFYNEHLFQTKLISLF 83


>ref|XP_007148792.1| hypothetical protein PHAVU_005G014700g [Phaseolus vulgaris]
           gi|561022056|gb|ESW20786.1| hypothetical protein
           PHAVU_005G014700g [Phaseolus vulgaris]
          Length = 814

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 44/78 (56%), Positives = 58/78 (74%)
 Frame = -1

Query: 240 RPSTSLPVLLHTQKGQPTKSSHTLSQRVYIPSHVYTHPSALLLEICSHVEEVRRILPLVI 61
           RP+    +     K +PT  S  L QR++IPSHVY HPSA+LLE+C+ ++E+ +ILPLVI
Sbjct: 9   RPAPIPNITNQNTKKRPT--SVPLYQRIFIPSHVYRHPSAVLLELCTSLKELHQILPLVI 66

Query: 60  KSGLYNEHLFQTKLISLF 7
           K+G Y+EH FQTKLISLF
Sbjct: 67  KNGFYDEHFFQTKLISLF 84


>ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338477|gb|EFH68894.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 809

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 43/64 (67%), Positives = 52/64 (81%), Gaps = 2/64 (3%)
 Frame = -1

Query: 192 PTKSSHT--LSQRVYIPSHVYTHPSALLLEICSHVEEVRRILPLVIKSGLYNEHLFQTKL 19
           P  SSH   LSQR YIP++VY HP+ALLLE CS ++E+R ILPL+ K+GLY EHLFQTKL
Sbjct: 16  PISSSHRHFLSQRNYIPANVYEHPAALLLERCSSLKELRHILPLIFKNGLYQEHLFQTKL 75

Query: 18  ISLF 7
           +SLF
Sbjct: 76  VSLF 79


>gb|EXB44298.1| hypothetical protein L484_012217 [Morus notabilis]
          Length = 814

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 48/95 (50%), Positives = 66/95 (69%)
 Frame = -1

Query: 291 TTTLMPFSSSSLTCSKSRPSTSLPVLLHTQKGQPTKSSHTLSQRVYIPSHVYTHPSALLL 112
           ++ ++P + S  T  K R STSLP            + HTLSQR +IPSHVY HP+A+LL
Sbjct: 3   SSQVLPIAPSPPT--KLRLSTSLP-----------GTFHTLSQRTHIPSHVYKHPAAILL 49

Query: 111 EICSHVEEVRRILPLVIKSGLYNEHLFQTKLISLF 7
           E+ + ++E+R+ILPL+IK+GLY E LFQTKL+S F
Sbjct: 50  ELSTSLQELRQILPLIIKNGLYGELLFQTKLVSSF 84


>ref|XP_006304494.1| hypothetical protein CARUB_v10011264mg [Capsella rubella]
           gi|482573205|gb|EOA37392.1| hypothetical protein
           CARUB_v10011264mg [Capsella rubella]
          Length = 811

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 40/57 (70%), Positives = 49/57 (85%)
 Frame = -1

Query: 177 HTLSQRVYIPSHVYTHPSALLLEICSHVEEVRRILPLVIKSGLYNEHLFQTKLISLF 7
           H LSQR YIP++VY HP+ALLLE CS ++++R ILPLV K+GLY EHLFQTKL+SLF
Sbjct: 25  HFLSQRTYIPANVYEHPAALLLERCSSLKDLRHILPLVFKNGLYQEHLFQTKLVSLF 81


>ref|XP_004308197.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Fragaria vesca subsp. vesca]
          Length = 827

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 43/85 (50%), Positives = 59/85 (69%)
 Frame = -1

Query: 261 SLTCSKSRPSTSLPVLLHTQKGQPTKSSHTLSQRVYIPSHVYTHPSALLLEICSHVEEVR 82
           S+T +K+ P T +   L T K   T  S T  +  +IPSHVYTHP+A+LLE+C+ + E+ 
Sbjct: 13  SITNTKTLPPT-ISTKLPTPKSTSTLLSQTSERTHHIPSHVYTHPTAILLELCTSMRELH 71

Query: 81  RILPLVIKSGLYNEHLFQTKLISLF 7
           +I PL+IK+GLY EH F TKL+SLF
Sbjct: 72  QIFPLIIKNGLYTEHYFHTKLLSLF 96


>ref|XP_006393717.1| hypothetical protein EUTSA_v10011247mg [Eutrema salsugineum]
           gi|557090295|gb|ESQ31003.1| hypothetical protein
           EUTSA_v10011247mg [Eutrema salsugineum]
          Length = 807

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 39/57 (68%), Positives = 48/57 (84%)
 Frame = -1

Query: 177 HTLSQRVYIPSHVYTHPSALLLEICSHVEEVRRILPLVIKSGLYNEHLFQTKLISLF 7
           H LSQR YIP++VY HP+ALLLE CS ++ +R +LPLV K+GLY EHLFQTKL+SLF
Sbjct: 21  HFLSQRTYIPANVYEHPTALLLEKCSSLKHLRHVLPLVFKNGLYQEHLFQTKLVSLF 77


>ref|XP_004233812.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Solanum lycopersicum]
          Length = 811

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 36/57 (63%), Positives = 52/57 (91%)
 Frame = -1

Query: 174 TLSQRVYIPSHVYTHPSALLLEICSHVEEVRRILPLVIKSGLYNEHLFQTKLISLFS 4
           +LSQRV+IPSH+Y HP+A+LLE+C+ ++E+ +ILP +IK+GLY EHLF+TKL+SLF+
Sbjct: 25  SLSQRVHIPSHIYKHPTAILLELCNSMKELHQILPHIIKNGLYKEHLFETKLVSLFT 81


>ref|XP_006347159.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Solanum tuberosum]
          Length = 809

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 36/56 (64%), Positives = 51/56 (91%)
 Frame = -1

Query: 171 LSQRVYIPSHVYTHPSALLLEICSHVEEVRRILPLVIKSGLYNEHLFQTKLISLFS 4
           LSQRV+IPSH+Y HP+A+LLE+C+ ++E+ +ILP +IK+GLY EHLF+TKL+SLF+
Sbjct: 24  LSQRVHIPSHIYKHPTAILLELCNSMKELHQILPHIIKNGLYKEHLFETKLVSLFT 79


>ref|XP_007010747.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508727660|gb|EOY19557.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 886

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 39/62 (62%), Positives = 50/62 (80%)
 Frame = -1

Query: 192 PTKSSHTLSQRVYIPSHVYTHPSALLLEICSHVEEVRRILPLVIKSGLYNEHLFQTKLIS 13
           P   SHTLSQR  IP HVY HP+A+LLE+ + ++EV +ILP +IKS LY++HLFQTKL+S
Sbjct: 95  PKPHSHTLSQRTQIPLHVYKHPTAILLELSTSIKEVYQILPHIIKSNLYSQHLFQTKLLS 154

Query: 12  LF 7
           LF
Sbjct: 155 LF 156


>ref|XP_002525566.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535145|gb|EEF36825.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 563

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 44/87 (50%), Positives = 62/87 (71%)
 Frame = -1

Query: 267 SSSLTCSKSRPSTSLPVLLHTQKGQPTKSSHTLSQRVYIPSHVYTHPSALLLEICSHVEE 88
           SS L    + PS S P  LH++    T + +TL +R YIP H+Y HP+A+LLE+C+ V+E
Sbjct: 2   SSQLLPIIATPSPS-PSPLHSKTRHST-TINTLPRRTYIPGHIYKHPTAVLLELCTSVKE 59

Query: 87  VRRILPLVIKSGLYNEHLFQTKLISLF 7
           + +I+P +IK+G Y+E LFQTKLISLF
Sbjct: 60  LHQIIPSIIKNGFYSEELFQTKLISLF 86