BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00022693
         (745 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub...   389   e-106
emb|CBI35100.3| unnamed protein product [Vitis vinifera]              389   e-106
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat...   389   e-106
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer...   373   e-101
ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citr...   373   e-101
ref|XP_002297732.2| DNA-directed RNA polymerase family protein [...   372   e-101
gb|EXC31692.1| putative DNA-directed RNA polymerase I subunit RP...   372   e-100
ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I sub...   372   e-100
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub...   372   e-100
ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phas...   371   e-100
ref|XP_006601019.1| PREDICTED: probable DNA-directed RNA polymer...   369   e-100
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer...   369   e-100
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub...   365   7e-99
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub...   365   7e-99
ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I sub...   364   2e-98
ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobro...   363   3e-98
ref|XP_007010836.1| DNA-directed RNA polymerase isoform 1 [Theob...   363   3e-98
ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymer...   362   6e-98
ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I sub...   362   8e-98
ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutr...   357   2e-96

>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
            vinifera]
          Length = 1142

 Score =  389 bits (1000), Expect = e-106
 Identities = 194/248 (78%), Positives = 213/248 (85%), Gaps = 1/248 (0%)
 Frame = +1

Query: 4    HSSIDADGLPYVGQMLHPNEPYYSIHNTVNNTTKTFALKGSETVIVDYVAVDGRNKQKPP 183
            +S ID+DGLPYVGQM++PNEPY SI+N V ++T+   LKGSE VIVDYVA+D +NK K P
Sbjct: 789  NSLIDSDGLPYVGQMINPNEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALDAKNK-KHP 847

Query: 184  QKVNIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 363
            QKVNIRFRRPRNP+IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR
Sbjct: 848  QKVNIRFRRPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 907

Query: 364  MTIGMLLESIAAKGGSLNGKYVDATPFPGAVKKA-GEESSLSDSRVDELGPLLASYGFNY 540
            MTI MLLES+AAKGGSL+GK+VDATPF  +++KA GE  S S S VDELG +L SYGFNY
Sbjct: 908  MTIAMLLESVAAKGGSLHGKFVDATPFSDSLRKANGEAGSESSSLVDELGSMLTSYGFNY 967

Query: 541  HGLEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 720
            HG+EVLYSG  GTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQP        
Sbjct: 968  HGVEVLYSGFYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGG 1027

Query: 721  XXXFGEME 744
               FGEME
Sbjct: 1028 GIRFGEME 1035


>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  389 bits (1000), Expect = e-106
 Identities = 194/248 (78%), Positives = 213/248 (85%), Gaps = 1/248 (0%)
 Frame = +1

Query: 4    HSSIDADGLPYVGQMLHPNEPYYSIHNTVNNTTKTFALKGSETVIVDYVAVDGRNKQKPP 183
            +S ID+DGLPYVGQM++PNEPY SI+N V ++T+   LKGSE VIVDYVA+D +NK K P
Sbjct: 782  NSLIDSDGLPYVGQMINPNEPYCSIYNEVTSSTRATKLKGSEPVIVDYVALDAKNK-KHP 840

Query: 184  QKVNIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 363
            QKVNIRFRRPRNP+IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR
Sbjct: 841  QKVNIRFRRPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 900

Query: 364  MTIGMLLESIAAKGGSLNGKYVDATPFPGAVKKA-GEESSLSDSRVDELGPLLASYGFNY 540
            MTI MLLES+AAKGGSL+GK+VDATPF  +++KA GE  S S S VDELG +L SYGFNY
Sbjct: 901  MTIAMLLESVAAKGGSLHGKFVDATPFSDSLRKANGEAGSESSSLVDELGSMLTSYGFNY 960

Query: 541  HGLEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 720
            HG+EVLYSG  GTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQP        
Sbjct: 961  HGVEVLYSGFYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGG 1020

Query: 721  XXXFGEME 744
               FGEME
Sbjct: 1021 GIRFGEME 1028


>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
            gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
            subunit, putative [Ricinus communis]
          Length = 1159

 Score =  389 bits (998), Expect = e-106
 Identities = 193/249 (77%), Positives = 211/249 (84%), Gaps = 2/249 (0%)
 Frame = +1

Query: 4    HSSIDADGLPYVGQMLHPNEPYYSIHNTVNNTTKTFALKGSETVIVDYVAVDGRNKQKPP 183
            HS ID+DGLPYVGQM+HPNEPY SI+N + NTT+T   KGS+ VIVDYVA+D +NK K  
Sbjct: 805  HSVIDSDGLPYVGQMIHPNEPYCSIYNEITNTTRTNNRKGSDPVIVDYVAIDTKNK-KHL 863

Query: 184  QKVNIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 363
            QKVNIRFR PRNP+IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR
Sbjct: 864  QKVNIRFRHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 923

Query: 364  MTIGMLLESIAAKGGSLNGKYVDATPFPGAVK--KAGEESSLSDSRVDELGPLLASYGFN 537
            MTI MLLES+AAKGGSLNGK+VDATPF  +VK    GE  S S+S VD+LG +L S+GFN
Sbjct: 924  MTIAMLLESLAAKGGSLNGKFVDATPFTSSVKNVNGGEAKSESESLVDDLGNMLRSHGFN 983

Query: 538  YHGLEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXX 717
            YHG+EVLYSGV GTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQ+TRQP       
Sbjct: 984  YHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQITRQPIKGRKRG 1043

Query: 718  XXXXFGEME 744
                FGEME
Sbjct: 1044 GGIRFGEME 1052


>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Citrus sinensis]
          Length = 1175

 Score =  373 bits (958), Expect = e-101
 Identities = 181/249 (72%), Positives = 206/249 (82%), Gaps = 2/249 (0%)
 Frame = +1

Query: 4    HSSIDADGLPYVGQMLHPNEPYYSIHNTVNNTTKTFALKGSETVIVDYVAVDGRNKQKPP 183
            HS ID+DGLPYVGQM+HP EPY SI++   N+ +T + KGSE+V VDYVAVD +N +  P
Sbjct: 820  HSVIDSDGLPYVGQMIHPGEPYCSIYDKTTNSWRTNSRKGSESVFVDYVAVDMKNSKNLP 879

Query: 184  QKVNIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 363
            QK NIRFR  RNP+IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR
Sbjct: 880  QKANIRFRHTRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 939

Query: 364  MTIGMLLESIAAKGGSLNGKYVDATPFPGAVKKAGEESSLSDSR--VDELGPLLASYGFN 537
            MTI MLLES+AAKGGSL+GK++DATPF  +VKK   ++   +S+  VDELG +L + GFN
Sbjct: 940  MTIAMLLESVAAKGGSLHGKFMDATPFANSVKKTNGDTGTDESKSLVDELGEMLRTCGFN 999

Query: 538  YHGLEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXX 717
            YHG+EVLYSGV GTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQ+TRQP       
Sbjct: 1000 YHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTMDQITRQPIKGRKRG 1059

Query: 718  XXXXFGEME 744
                FGEME
Sbjct: 1060 GGIRFGEME 1068


>ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citrus clementina]
            gi|557530116|gb|ESR41366.1| hypothetical protein
            CICLE_v10024768mg [Citrus clementina]
          Length = 1082

 Score =  373 bits (958), Expect = e-101
 Identities = 181/249 (72%), Positives = 206/249 (82%), Gaps = 2/249 (0%)
 Frame = +1

Query: 4    HSSIDADGLPYVGQMLHPNEPYYSIHNTVNNTTKTFALKGSETVIVDYVAVDGRNKQKPP 183
            HS ID+DGLPYVGQM+HP EPY SI++   N+ +T + KGSE+V VDYVAVD +N +  P
Sbjct: 727  HSVIDSDGLPYVGQMIHPGEPYCSIYDKTTNSWRTNSRKGSESVFVDYVAVDMKNSKNLP 786

Query: 184  QKVNIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 363
            QK NIRFR  RNP+IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR
Sbjct: 787  QKANIRFRHTRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 846

Query: 364  MTIGMLLESIAAKGGSLNGKYVDATPFPGAVKKAGEESSLSDSR--VDELGPLLASYGFN 537
            MTI MLLES+AAKGGSL+GK++DATPF  +VKK   ++   +S+  VDELG +L + GFN
Sbjct: 847  MTIAMLLESVAAKGGSLHGKFMDATPFANSVKKTNGDTGTDESKSLVDELGEMLRTCGFN 906

Query: 538  YHGLEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXX 717
            YHG+EVLYSGV GTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQ+TRQP       
Sbjct: 907  YHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTMDQITRQPIKGRKRG 966

Query: 718  XXXXFGEME 744
                FGEME
Sbjct: 967  GGIRFGEME 975


>ref|XP_002297732.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|550346693|gb|EEE82537.2| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1117

 Score =  372 bits (955), Expect = e-101
 Identities = 187/250 (74%), Positives = 206/250 (82%), Gaps = 2/250 (0%)
 Frame = +1

Query: 1    THSSIDADGLPYVGQMLHPNEPYYSIHNTVNNTTKTFALKGSETVIVDYVAVDGRNKQKP 180
            +HS ID+DGLPYVGQ+++PNEPY SI+N + NT+K    KGSE  IVDYVAVD ++K K 
Sbjct: 765  SHSLIDSDGLPYVGQIINPNEPYCSIYNDITNTSKPKYRKGSEPAIVDYVAVDTKSK-KH 823

Query: 181  PQKVNIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPS 360
             QKVNIRFR PRNP+IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPS
Sbjct: 824  LQKVNIRFRHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPS 883

Query: 361  RMTIGMLLESIAAKGGSLNGKYVDATPFPGAVK--KAGEESSLSDSRVDELGPLLASYGF 534
            RMTI MLLES+AAKGGSLNG +VDATPF   V+   AGE  S  +S VDELG +L S GF
Sbjct: 884  RMTIAMLLESLAAKGGSLNGNFVDATPFASTVRASNAGEAKSEPESLVDELGKMLKSKGF 943

Query: 535  NYHGLEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXX 714
            N+HG+EVLYSGV GTELTCEIFIGPVYYQRLRHMVSDKFQVRSTG VDQ+TRQP      
Sbjct: 944  NHHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGPVDQITRQPIKGRKR 1003

Query: 715  XXXXXFGEME 744
                 FGEME
Sbjct: 1004 GGGIRFGEME 1013


>gb|EXC31692.1| putative DNA-directed RNA polymerase I subunit RPA2 [Morus notabilis]
          Length = 1243

 Score =  372 bits (954), Expect = e-100
 Identities = 186/249 (74%), Positives = 205/249 (82%), Gaps = 2/249 (0%)
 Frame = +1

Query: 4    HSSIDADGLPYVGQMLHPNEPYYSIHNTVNNTTKTFALKGSETVIVDYVAVDGRNKQKPP 183
            HS ID+DGLPYVGQ + PNEP+ SI+N V   T+T   KGSE V+VDYVA+D +NKQK  
Sbjct: 822  HSLIDSDGLPYVGQTIKPNEPFCSIYNEVTGGTRTMKRKGSEPVVVDYVAIDVKNKQKL- 880

Query: 184  QKVNIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 363
            +KVNIRFR+PRNP+IGDKFSSRHGQKGVCSQLWPDIDMPFSG TGMRPDLIINPHAFPSR
Sbjct: 881  RKVNIRFRQPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGATGMRPDLIINPHAFPSR 940

Query: 364  MTIGMLLESIAAKGGSLNGKYVDATPFPGAVKKAGEE--SSLSDSRVDELGPLLASYGFN 537
            MTI MLLES+AAKGGSL+GKYVDATPF G++ +A EE  S  S S VDELG +L   GFN
Sbjct: 941  MTIAMLLESVAAKGGSLHGKYVDATPFSGSLNEAKEETVSKHSTSLVDELGQMLREKGFN 1000

Query: 538  YHGLEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXX 717
            YHG+EVLYSGV GTEL CEIFIGPVYYQRLRHMVSDKFQVRSTG +DQVTRQP       
Sbjct: 1001 YHGVEVLYSGVYGTELPCEIFIGPVYYQRLRHMVSDKFQVRSTGIIDQVTRQPIKGRKRG 1060

Query: 718  XXXXFGEME 744
                FGEME
Sbjct: 1061 GGIRFGEME 1069


>ref|XP_004164992.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 719

 Score =  372 bits (954), Expect = e-100
 Identities = 185/248 (74%), Positives = 205/248 (82%), Gaps = 2/248 (0%)
 Frame = +1

Query: 7    SSIDADGLPYVGQMLHPNEPYYSIHNTVNNTTKTFALKGSETVIVDYVAVDGRNKQKPPQ 186
            S IDADGLPYVGQM+ P+EPY SI++ V  TT+T  LKGSE VIVDYV+VD +NK  P Q
Sbjct: 367  SIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSEAVIVDYVSVDVKNKNNP-Q 425

Query: 187  KVNIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRM 366
            KVNIRFRRPRNP+IGDKFSSRHGQKGVCSQLWPD+DMPF G TGMRPDLIINPHAFPSRM
Sbjct: 426  KVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRM 485

Query: 367  TIGMLLESIAAKGGSLNGKYVDATPFPGAVKK--AGEESSLSDSRVDELGPLLASYGFNY 540
            TI ML+ES+AAKGG LNG++V+ATPF  +V K  AG+E +  ++ VDELG  L   GFNY
Sbjct: 486  TIAMLMESVAAKGGCLNGEFVNATPFRSSVNKTNAGDEETNGETLVDELGSTLIKKGFNY 545

Query: 541  HGLEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 720
            HGLEVLYSGV GTELTCEIFIGPVYYQRLRHMVSDK+QVRSTGTVDQVTRQP        
Sbjct: 546  HGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGG 605

Query: 721  XXXFGEME 744
               FGEME
Sbjct: 606  GIRFGEME 613


>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
            sativus]
          Length = 1173

 Score =  372 bits (954), Expect = e-100
 Identities = 185/248 (74%), Positives = 205/248 (82%), Gaps = 2/248 (0%)
 Frame = +1

Query: 7    SSIDADGLPYVGQMLHPNEPYYSIHNTVNNTTKTFALKGSETVIVDYVAVDGRNKQKPPQ 186
            S IDADGLPYVGQM+ P+EPY SI++ V  TT+T  LKGSE VIVDYV+VD +NK  P Q
Sbjct: 821  SIIDADGLPYVGQMIQPDEPYCSIYDEVAGTTRTMKLKGSEAVIVDYVSVDVKNKNNP-Q 879

Query: 187  KVNIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRM 366
            KVNIRFRRPRNP+IGDKFSSRHGQKGVCSQLWPD+DMPF G TGMRPDLIINPHAFPSRM
Sbjct: 880  KVNIRFRRPRNPMIGDKFSSRHGQKGVCSQLWPDVDMPFCGATGMRPDLIINPHAFPSRM 939

Query: 367  TIGMLLESIAAKGGSLNGKYVDATPFPGAVKK--AGEESSLSDSRVDELGPLLASYGFNY 540
            TI ML+ES+AAKGG LNG++V+ATPF  +V K  AG+E +  ++ VDELG  L   GFNY
Sbjct: 940  TIAMLMESVAAKGGCLNGEFVNATPFRSSVNKTNAGDEETNGETLVDELGSTLIKKGFNY 999

Query: 541  HGLEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 720
            HGLEVLYSGV GTELTCEIFIGPVYYQRLRHMVSDK+QVRSTGTVDQVTRQP        
Sbjct: 1000 HGLEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTVDQVTRQPIKGRKKGG 1059

Query: 721  XXXFGEME 744
               FGEME
Sbjct: 1060 GIRFGEME 1067


>ref|XP_007133696.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
            gi|561006696|gb|ESW05690.1| hypothetical protein
            PHAVU_011G201300g [Phaseolus vulgaris]
          Length = 1180

 Score =  371 bits (952), Expect = e-100
 Identities = 188/246 (76%), Positives = 205/246 (83%), Gaps = 1/246 (0%)
 Frame = +1

Query: 10   SIDADGLPYVGQMLHPNEPYYSIHNTVNNTTKTFALKGSETVIVDYVAVDGRNKQKPPQK 189
            SID+DGLP+VGQM+ P+EPY SI+N V ++T+T+  KGSE V VDYVAVD +NK K  QK
Sbjct: 822  SIDSDGLPHVGQMIRPDEPYCSIYNEVTSSTQTYKRKGSEAVYVDYVAVDVKNK-KHIQK 880

Query: 190  VNIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMT 369
            VNIRFR PRNPVIGDKFSSRHGQKGVCSQLWPD+DMPFSG TGMRPDLIINPHAFPSRMT
Sbjct: 881  VNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMT 940

Query: 370  IGMLLESIAAKGGSLNGKYVDATPFPGAVKKAGEES-SLSDSRVDELGPLLASYGFNYHG 546
            I MLLES+AAKGGSL G++VDATPF  + KK GE S S S S VD+LG LL   GFNYHG
Sbjct: 941  IAMLLESVAAKGGSLRGEFVDATPFRSSTKKDGEGSDSKSGSLVDDLGVLLKEKGFNYHG 1000

Query: 547  LEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXX 726
            LEVLYSGV GTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQVTRQP          
Sbjct: 1001 LEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGI 1060

Query: 727  XFGEME 744
             FGEME
Sbjct: 1061 RFGEME 1066


>ref|XP_006601019.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X2 [Glycine max]
          Length = 1004

 Score =  369 bits (948), Expect = e-100
 Identities = 187/246 (76%), Positives = 204/246 (82%), Gaps = 1/246 (0%)
 Frame = +1

Query: 10   SIDADGLPYVGQMLHPNEPYYSIHNTVNNTTKTFALKGSETVIVDYVAVDGRNKQKPPQK 189
            SID+DGLP+VGQM+ P+EPY SI+N V ++  T   KGSE V VDYVAVD +NK K  QK
Sbjct: 651  SIDSDGLPHVGQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAVDVKNK-KHLQK 709

Query: 190  VNIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMT 369
            VNIRFR PRNPVIGDKFSSRHGQKGVCSQLWPD+DMPFSG TGMRPDLIINPHAFPSRMT
Sbjct: 710  VNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMT 769

Query: 370  IGMLLESIAAKGGSLNGKYVDATPFPGAVKK-AGEESSLSDSRVDELGPLLASYGFNYHG 546
            I MLLES+AAKGGSL G++VDATPF  +VKK +GE  S+S S VD+LG LL   GFNYHG
Sbjct: 770  IAMLLESVAAKGGSLRGEFVDATPFRSSVKKDSGESDSMSGSIVDDLGLLLREKGFNYHG 829

Query: 547  LEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXX 726
            LEVLYSGV GTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQVTRQP          
Sbjct: 830  LEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGI 889

Query: 727  XFGEME 744
             FGEME
Sbjct: 890  RFGEME 895


>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Glycine max]
          Length = 1175

 Score =  369 bits (948), Expect = e-100
 Identities = 187/246 (76%), Positives = 204/246 (82%), Gaps = 1/246 (0%)
 Frame = +1

Query: 10   SIDADGLPYVGQMLHPNEPYYSIHNTVNNTTKTFALKGSETVIVDYVAVDGRNKQKPPQK 189
            SID+DGLP+VGQM+ P+EPY SI+N V ++  T   KGSE V VDYVAVD +NK K  QK
Sbjct: 822  SIDSDGLPHVGQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAVDVKNK-KHLQK 880

Query: 190  VNIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMT 369
            VNIRFR PRNPVIGDKFSSRHGQKGVCSQLWPD+DMPFSG TGMRPDLIINPHAFPSRMT
Sbjct: 881  VNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGNTGMRPDLIINPHAFPSRMT 940

Query: 370  IGMLLESIAAKGGSLNGKYVDATPFPGAVKK-AGEESSLSDSRVDELGPLLASYGFNYHG 546
            I MLLES+AAKGGSL G++VDATPF  +VKK +GE  S+S S VD+LG LL   GFNYHG
Sbjct: 941  IAMLLESVAAKGGSLRGEFVDATPFRSSVKKDSGESDSMSGSIVDDLGLLLREKGFNYHG 1000

Query: 547  LEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXX 726
            LEVLYSGV GTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQVTRQP          
Sbjct: 1001 LEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGI 1060

Query: 727  XFGEME 744
             FGEME
Sbjct: 1061 RFGEME 1066


>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X2
            [Glycine max]
          Length = 1151

 Score =  365 bits (938), Expect = 7e-99
 Identities = 185/246 (75%), Positives = 201/246 (81%), Gaps = 1/246 (0%)
 Frame = +1

Query: 10   SIDADGLPYVGQMLHPNEPYYSIHNTVNNTTKTFALKGSETVIVDYVAVDGRNKQKPPQK 189
            SID+DGLP+VGQM+ P+EPY SI+N V ++  T   KGSE V VDYVA D +NK K  QK
Sbjct: 798  SIDSDGLPHVGQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAADVKNK-KHLQK 856

Query: 190  VNIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMT 369
            VNIRFR PRNPVIGDKFSSRHGQKGVCSQLWPD+DMPFSG TGMRPDLIINPHAFPSRMT
Sbjct: 857  VNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMT 916

Query: 370  IGMLLESIAAKGGSLNGKYVDATPFPGAV-KKAGEESSLSDSRVDELGPLLASYGFNYHG 546
            I MLLES+AAKGGSL G++VDATPF  +V K +GE  S S S VD+LG LL   GFNYHG
Sbjct: 917  IAMLLESVAAKGGSLRGEFVDATPFRSSVTKDSGESDSKSGSLVDDLGLLLREKGFNYHG 976

Query: 547  LEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXX 726
            LEVLYSGV GTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQVTRQP          
Sbjct: 977  LEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGI 1036

Query: 727  XFGEME 744
             FGEME
Sbjct: 1037 RFGEME 1042


>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform X1
            [Glycine max]
          Length = 1175

 Score =  365 bits (938), Expect = 7e-99
 Identities = 185/246 (75%), Positives = 201/246 (81%), Gaps = 1/246 (0%)
 Frame = +1

Query: 10   SIDADGLPYVGQMLHPNEPYYSIHNTVNNTTKTFALKGSETVIVDYVAVDGRNKQKPPQK 189
            SID+DGLP+VGQM+ P+EPY SI+N V ++  T   KGSE V VDYVA D +NK K  QK
Sbjct: 822  SIDSDGLPHVGQMIRPDEPYCSIYNEVTSSIHTLKRKGSEAVYVDYVAADVKNK-KHLQK 880

Query: 190  VNIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMT 369
            VNIRFR PRNPVIGDKFSSRHGQKGVCSQLWPD+DMPFSG TGMRPDLIINPHAFPSRMT
Sbjct: 881  VNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDVDMPFSGTTGMRPDLIINPHAFPSRMT 940

Query: 370  IGMLLESIAAKGGSLNGKYVDATPFPGAV-KKAGEESSLSDSRVDELGPLLASYGFNYHG 546
            I MLLES+AAKGGSL G++VDATPF  +V K +GE  S S S VD+LG LL   GFNYHG
Sbjct: 941  IAMLLESVAAKGGSLRGEFVDATPFRSSVTKDSGESDSKSGSLVDDLGLLLREKGFNYHG 1000

Query: 547  LEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXX 726
            LEVLYSGV GTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGT+DQVTRQP          
Sbjct: 1001 LEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTIDQVTRQPIKGRKRGGGI 1060

Query: 727  XFGEME 744
             FGEME
Sbjct: 1061 RFGEME 1066


>ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1169

 Score =  364 bits (934), Expect = 2e-98
 Identities = 183/249 (73%), Positives = 202/249 (81%), Gaps = 2/249 (0%)
 Frame = +1

Query: 4    HSSIDADGLPYVGQMLHPNEPYYSIHNTVNNTTKTFALKGSETVIVDYVAVDGRNKQKPP 183
            HS ID+DGLPYVGQ ++P+EPYYSI++ V    +T   KGSE  IVDYVA+DG+   K  
Sbjct: 818  HSLIDSDGLPYVGQTINPDEPYYSIYDEVKGAIRTTKRKGSEPAIVDYVAIDGK---KHL 874

Query: 184  QKVNIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 363
            QKVNIRFR PRNP+IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR
Sbjct: 875  QKVNIRFRHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 934

Query: 364  MTIGMLLESIAAKGGSLNGKYVDATPFPGAVKKAGEESSLSDSR--VDELGPLLASYGFN 537
            MTI MLLES+AAKGGSL+GK+VDATPF  + KK  EE++   S+  VDELG +L   GFN
Sbjct: 935  MTIAMLLESVAAKGGSLHGKFVDATPFANSEKKVNEETNGEKSKTLVDELGEMLKVKGFN 994

Query: 538  YHGLEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXX 717
            Y+G EVLYSGV GTELTCEIFIGPVYYQRLRHMVSDKFQVRSTG VDQVTRQP       
Sbjct: 995  YYGAEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGMVDQVTRQPIKGRKRG 1054

Query: 718  XXXXFGEME 744
                FGEME
Sbjct: 1055 GGIRFGEME 1063


>ref|XP_007010837.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
            gi|508727750|gb|EOY19647.1| Nuclear RNA polymerase A2
            isoform 2 [Theobroma cacao]
          Length = 1180

 Score =  363 bits (933), Expect = 3e-98
 Identities = 182/247 (73%), Positives = 206/247 (83%), Gaps = 1/247 (0%)
 Frame = +1

Query: 7    SSIDADGLPYVGQMLHPNEPYYSIHNTVNNTTKTFALKGSETVIVDYVAVDGRNKQKPPQ 186
            S +D+DGLP+VGQ++ PNEPY S  N V N+ + +  KGSETVIVDYVAVD ++K K  Q
Sbjct: 828  SCLDSDGLPHVGQVIRPNEPYCSTINQVTNSKRLYNHKGSETVIVDYVAVDTKSK-KHLQ 886

Query: 187  KVNIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRM 366
            K NIRFR PRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRM
Sbjct: 887  KANIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRM 946

Query: 367  TIGMLLESIAAKGGSLNGKYVDATPFPGAVKKA-GEESSLSDSRVDELGPLLASYGFNYH 543
            TI MLLES+AAKGGSL+GK+VDATPF  +VK+A G+  + S+S VDELG +L + GFNYH
Sbjct: 947  TIAMLLESVAAKGGSLHGKFVDATPFSDSVKEAKGKTEAESESLVDELGSMLRARGFNYH 1006

Query: 544  GLEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXX 723
            G+EVLYSGV GTELTCEIFIGPVYYQRLRHMVSDK+QVR+TG VDQ+TRQP         
Sbjct: 1007 GVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRATGQVDQITRQPIKGRKRGGG 1066

Query: 724  XXFGEME 744
              FGEME
Sbjct: 1067 IRFGEME 1073


>ref|XP_007010836.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508727749|gb|EOY19646.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1074

 Score =  363 bits (933), Expect = 3e-98
 Identities = 182/247 (73%), Positives = 206/247 (83%), Gaps = 1/247 (0%)
 Frame = +1

Query: 7    SSIDADGLPYVGQMLHPNEPYYSIHNTVNNTTKTFALKGSETVIVDYVAVDGRNKQKPPQ 186
            S +D+DGLP+VGQ++ PNEPY S  N V N+ + +  KGSETVIVDYVAVD ++K K  Q
Sbjct: 701  SCLDSDGLPHVGQVIRPNEPYCSTINQVTNSKRLYNHKGSETVIVDYVAVDTKSK-KHLQ 759

Query: 187  KVNIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRM 366
            K NIRFR PRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRM
Sbjct: 760  KANIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRM 819

Query: 367  TIGMLLESIAAKGGSLNGKYVDATPFPGAVKKA-GEESSLSDSRVDELGPLLASYGFNYH 543
            TI MLLES+AAKGGSL+GK+VDATPF  +VK+A G+  + S+S VDELG +L + GFNYH
Sbjct: 820  TIAMLLESVAAKGGSLHGKFVDATPFSDSVKEAKGKTEAESESLVDELGSMLRARGFNYH 879

Query: 544  GLEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXX 723
            G+EVLYSGV GTELTCEIFIGPVYYQRLRHMVSDK+QVR+TG VDQ+TRQP         
Sbjct: 880  GVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRATGQVDQITRQPIKGRKRGGG 939

Query: 724  XXFGEME 744
              FGEME
Sbjct: 940  IRFGEME 946


>ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
            isoform X1 [Cicer arietinum]
            gi|502078798|ref|XP_004486058.1| PREDICTED: probable
            DNA-directed RNA polymerase I subunit RPA2-like isoform
            X2 [Cicer arietinum]
          Length = 1177

 Score =  362 bits (930), Expect = 6e-98
 Identities = 186/246 (75%), Positives = 199/246 (80%), Gaps = 1/246 (0%)
 Frame = +1

Query: 10   SIDADGLPYVGQMLHPNEPYYSIHNTVNNTTKTFALKGSETVIVDYVAVDGRNKQKPPQK 189
            SID+DGLP+VGQM+ P+EPY S +N V N T  F  KGSE V VDYVAVD + K K   K
Sbjct: 826  SIDSDGLPHVGQMIWPDEPYCSTYNEVTNKTYLFKKKGSEPVYVDYVAVDTKTK-KNLNK 884

Query: 190  VNIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMT 369
            VNIRFR PRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSG TGMRPDLIINPHAFPSRMT
Sbjct: 885  VNIRFRHPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGTTGMRPDLIINPHAFPSRMT 944

Query: 370  IGMLLESIAAKGGSLNGKYVDATPFPGAVKKAGEES-SLSDSRVDELGPLLASYGFNYHG 546
            I MLLES+AAKGGSL+GK+ DATPF  +VKK  EES S S S VDELG +L   GFNYHG
Sbjct: 945  IAMLLESVAAKGGSLHGKFKDATPFRSSVKKDDEESGSKSASLVDELGVMLKEKGFNYHG 1004

Query: 547  LEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXXXX 726
             EVLYSGV GTELTCEIFIGPVYYQRLRHMVSDK+QVRSTGT+DQVTRQP          
Sbjct: 1005 CEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKYQVRSTGTIDQVTRQPIKGRKRGGGI 1064

Query: 727  XFGEME 744
             FGEME
Sbjct: 1065 RFGEME 1070


>ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
            vesca subsp. vesca]
          Length = 1171

 Score =  362 bits (929), Expect = 8e-98
 Identities = 183/249 (73%), Positives = 200/249 (80%), Gaps = 2/249 (0%)
 Frame = +1

Query: 4    HSSIDADGLPYVGQMLHPNEPYYSIHNTVNNTTKTFALKGSETVIVDYVAVDGRNKQKPP 183
            HS ID+DGLPYVGQ + P+EPYYS ++ V    +T   KGSE  IVDYVA+DG+   K  
Sbjct: 820  HSLIDSDGLPYVGQTIKPDEPYYSTYDEVKGAIRTTKRKGSEPAIVDYVAIDGK---KQL 876

Query: 184  QKVNIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 363
            QKVNIRFR PRNP+IGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR
Sbjct: 877  QKVNIRFRHPRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 936

Query: 364  MTIGMLLESIAAKGGSLNGKYVDATPFPGAVKKAGEESSLSDSR--VDELGPLLASYGFN 537
            MTI MLLES+AAKGGSL+GKYVDATPF  + KK  EE++   S+  VDELG +L   GFN
Sbjct: 937  MTIAMLLESVAAKGGSLHGKYVDATPFANSEKKVKEETNGEKSKTLVDELGEMLKVKGFN 996

Query: 538  YHGLEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXX 717
            Y+G EVLYSGV GTELTCEIFIGPVYYQRLRHMVSDKFQVRSTG VDQVTRQP       
Sbjct: 997  YNGAEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGMVDQVTRQPIKGRKRG 1056

Query: 718  XXXXFGEME 744
                FGEME
Sbjct: 1057 GGIRFGEME 1065


>ref|XP_006415532.1| hypothetical protein EUTSA_v10006599mg [Eutrema salsugineum]
            gi|557093303|gb|ESQ33885.1| hypothetical protein
            EUTSA_v10006599mg [Eutrema salsugineum]
          Length = 1183

 Score =  357 bits (917), Expect = 2e-96
 Identities = 179/248 (72%), Positives = 200/248 (80%), Gaps = 1/248 (0%)
 Frame = +1

Query: 4    HSSIDADGLPYVGQMLHPNEPYYSIHNTVNNTTKTFALKGSETVIVDYVAVDGRNKQKPP 183
            HS IDADGLPY+GQ ++PNEPY SI++ V N+ KT   KG++ VIVD+V+VD ++K K P
Sbjct: 824  HSCIDADGLPYIGQKIYPNEPYCSIYDGVTNSIKTMKRKGTDPVIVDFVSVDMKSK-KHP 882

Query: 184  QKVNIRFRRPRNPVIGDKFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSR 363
            QK NIRFR  RNP+IGDKFSSRHGQKGVCSQLWPDIDMPF+GVTGMRPDLIINPHAFPSR
Sbjct: 883  QKANIRFRHARNPIIGDKFSSRHGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSR 942

Query: 364  MTIGMLLESIAAKGGSLNGKYVDATPFPGAVKKA-GEESSLSDSRVDELGPLLASYGFNY 540
            MTI MLLESIAAKGGSL G++VDATPF  AVKK  GEE S S   VD+LG +L   GFNY
Sbjct: 943  MTIAMLLESIAAKGGSLRGEFVDATPFRDAVKKPNGEEESKSSLLVDDLGSMLKEKGFNY 1002

Query: 541  HGLEVLYSGVLGTELTCEIFIGPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPXXXXXXXX 720
            +G E LYSG LG EL CEIF+GPVYYQRLRHMVSDKFQVRSTG VDQ+TRQP        
Sbjct: 1003 YGTETLYSGYLGVELKCEIFMGPVYYQRLRHMVSDKFQVRSTGLVDQLTRQPIKGRKRGG 1062

Query: 721  XXXFGEME 744
               FGEME
Sbjct: 1063 GIRFGEME 1070