BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cocculus22_contig00022663
         (261 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17913.3| unnamed protein product [Vitis vinifera]              159   3e-37
ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]     159   3e-37
dbj|BAA97366.1| unnamed protein product [Arabidopsis thaliana]        157   1e-36
ref|NP_568851.2| DNA ligase 4 [Arabidopsis thaliana] gi|75174554...   157   1e-36
ref|XP_006401236.1| hypothetical protein EUTSA_v10012474mg [Eutr...   156   3e-36
ref|XP_004978220.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA...   155   4e-36
ref|XP_004165348.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4...   155   4e-36
ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus]    155   4e-36
ref|XP_002866187.1| ATLIG4 [Arabidopsis lyrata subsp. lyrata] gi...   155   4e-36
gb|EEE61635.1| hypothetical protein OsJ_16077 [Oryza sativa Japo...   155   4e-36
gb|EEC77947.1| hypothetical protein OsI_17298 [Oryza sativa Indi...   155   4e-36
emb|CAH66777.1| OSIGBa0113I13.3 [Oryza sativa Indica Group]           155   4e-36
ref|XP_006653742.1| PREDICTED: putative DNA ligase 4-like [Oryza...   155   7e-36
ref|XP_002448485.1| hypothetical protein SORBIDRAFT_06g027820 [S...   154   1e-35
ref|XP_006282195.1| hypothetical protein CARUB_v10028461mg [Caps...   153   2e-35
ref|XP_007014429.1| DNA ligase IV [Theobroma cacao] gi|508784792...   152   4e-35
ref|XP_002325262.2| DNA ligase IV family protein [Populus tricho...   152   5e-35
ref|XP_006474277.1| PREDICTED: DNA ligase 4-like isoform X1 [Cit...   151   8e-35
ref|XP_006453240.1| hypothetical protein CICLE_v10007283mg [Citr...   151   8e-35
ref|XP_006453239.1| hypothetical protein CICLE_v10007283mg [Citr...   151   8e-35

>emb|CBI17913.3| unnamed protein product [Vitis vinifera]
          Length = 1163

 Score =  159 bits (403), Expect = 3e-37
 Identities = 76/87 (87%), Positives = 83/87 (95%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   PRRFMSFCRVGTGLSDDELDTLISKLNPYFRKNEYPKKTP-SFYEVTNNSKERPDVWIDS 178
           PRRF+SFCRVGTGLSDDELD +++KL PYFRKNEYPKK P SFY+VTNNSKERPD+WIDS
Sbjct: 487 PRRFISFCRVGTGLSDDELDAVVTKLKPYFRKNEYPKKAPPSFYQVTNNSKERPDIWIDS 546

Query: 179 PEKSIILSITSDIRTIKSEVFAAPYSL 259
           PEKSIILSITSDIRTI+SEVFAAPYSL
Sbjct: 547 PEKSIILSITSDIRTIRSEVFAAPYSL 573


>ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
          Length = 1162

 Score =  159 bits (403), Expect = 3e-37
 Identities = 76/87 (87%), Positives = 83/87 (95%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   PRRFMSFCRVGTGLSDDELDTLISKLNPYFRKNEYPKKTP-SFYEVTNNSKERPDVWIDS 178
           PRRF+SFCRVGTGLSDDELD +++KL PYFRKNEYPKK P SFY+VTNNSKERPD+WIDS
Sbjct: 486 PRRFISFCRVGTGLSDDELDAVVTKLKPYFRKNEYPKKAPPSFYQVTNNSKERPDIWIDS 545

Query: 179 PEKSIILSITSDIRTIKSEVFAAPYSL 259
           PEKSIILSITSDIRTI+SEVFAAPYSL
Sbjct: 546 PEKSIILSITSDIRTIRSEVFAAPYSL 572


>dbj|BAA97366.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1184

 Score =  157 bits (397), Expect = 1e-36
 Identities = 76/87 (87%), Positives = 83/87 (95%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   PRRFMSFCRVGTGLSDDELDTLISKLNPYFRKNEYPKKTP-SFYEVTNNSKERPDVWIDS 178
           PRRFMSFCRVGTGLSDDEL+T++SKL PYFRKNE+PKK P SFY+VTN+SKERPDVWIDS
Sbjct: 465 PRRFMSFCRVGTGLSDDELNTVVSKLKPYFRKNEHPKKAPPSFYQVTNHSKERPDVWIDS 524

Query: 179 PEKSIILSITSDIRTIKSEVFAAPYSL 259
           PEKSIILSITSDIRTI+SEVF APYSL
Sbjct: 525 PEKSIILSITSDIRTIRSEVFVAPYSL 551


>ref|NP_568851.2| DNA ligase 4 [Arabidopsis thaliana]
           gi|75174554|sp|Q9LL84.1|DNLI4_ARATH RecName: Full=DNA
           ligase 4; AltName: Full=DNA ligase IV; AltName:
           Full=Polydeoxyribonucleotide synthase [ATP] 4
           gi|9651815|gb|AAF91284.1|AF233527_1 DNA ligase IV
           [Arabidopsis thaliana] gi|332009474|gb|AED96857.1| DNA
           ligase 4 [Arabidopsis thaliana]
          Length = 1219

 Score =  157 bits (397), Expect = 1e-36
 Identities = 76/87 (87%), Positives = 83/87 (95%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   PRRFMSFCRVGTGLSDDELDTLISKLNPYFRKNEYPKKTP-SFYEVTNNSKERPDVWIDS 178
           PRRFMSFCRVGTGLSDDEL+T++SKL PYFRKNE+PKK P SFY+VTN+SKERPDVWIDS
Sbjct: 487 PRRFMSFCRVGTGLSDDELNTVVSKLKPYFRKNEHPKKAPPSFYQVTNHSKERPDVWIDS 546

Query: 179 PEKSIILSITSDIRTIKSEVFAAPYSL 259
           PEKSIILSITSDIRTI+SEVF APYSL
Sbjct: 547 PEKSIILSITSDIRTIRSEVFVAPYSL 573


>ref|XP_006401236.1| hypothetical protein EUTSA_v10012474mg [Eutrema salsugineum]
           gi|557102326|gb|ESQ42689.1| hypothetical protein
           EUTSA_v10012474mg [Eutrema salsugineum]
          Length = 1220

 Score =  156 bits (395), Expect = 3e-36
 Identities = 75/87 (86%), Positives = 83/87 (95%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   PRRFMSFCRVGTGLSDDELDTLISKLNPYFRKNEYPKKTP-SFYEVTNNSKERPDVWIDS 178
           PRRFMSFCRVGTGLSDDELDT++SKL PYF+KNE+PKK P SFY+VTN+SKERPDVWI+S
Sbjct: 487 PRRFMSFCRVGTGLSDDELDTVVSKLKPYFKKNEHPKKAPPSFYQVTNHSKERPDVWIES 546

Query: 179 PEKSIILSITSDIRTIKSEVFAAPYSL 259
           PEKSIILSITSDIRTI+SEVF APYSL
Sbjct: 547 PEKSIILSITSDIRTIRSEVFVAPYSL 573


>ref|XP_004978220.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA ligase 4-like [Setaria
           italica]
          Length = 1241

 Score =  155 bits (393), Expect = 4e-36
 Identities = 71/86 (82%), Positives = 80/86 (93%)
 Frame = +2

Query: 2   PRRFMSFCRVGTGLSDDELDTLISKLNPYFRKNEYPKKTPSFYEVTNNSKERPDVWIDSP 181
           P+RF+SFCRVGTGLSD+E D L++KL PYFRKNEYPKK P FYEVTNNSKERPDVWI+SP
Sbjct: 488 PKRFLSFCRVGTGLSDEERDALVTKLKPYFRKNEYPKKPPKFYEVTNNSKERPDVWIESP 547

Query: 182 EKSIILSITSDIRTIKSEVFAAPYSL 259
           +KS+I+SITSDIRTIKSEVFAAPY L
Sbjct: 548 DKSVIMSITSDIRTIKSEVFAAPYCL 573


>ref|XP_004165348.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4-like, partial [Cucumis
           sativus]
          Length = 918

 Score =  155 bits (393), Expect = 4e-36
 Identities = 74/87 (85%), Positives = 84/87 (96%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   PRRFMSFCRVGTGLSDDELDTLISKLNPYFRKNEYPKKT-PSFYEVTNNSKERPDVWIDS 178
           PRRF+SFCRVGTGL+D+ELD +++KL PYFRK+EYP+KT PSFY+VTNNSKERPDVWI+S
Sbjct: 189 PRRFVSFCRVGTGLTDEELDAVVNKLKPYFRKSEYPRKTAPSFYQVTNNSKERPDVWIES 248

Query: 179 PEKSIILSITSDIRTIKSEVFAAPYSL 259
           PEKSIILSITSDIRTIKSEVFAAPYSL
Sbjct: 249 PEKSIILSITSDIRTIKSEVFAAPYSL 275


>ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus]
          Length = 1214

 Score =  155 bits (393), Expect = 4e-36
 Identities = 74/87 (85%), Positives = 84/87 (96%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   PRRFMSFCRVGTGLSDDELDTLISKLNPYFRKNEYPKKT-PSFYEVTNNSKERPDVWIDS 178
           PRRF+SFCRVGTGL+D+ELD +++KL PYFRK+EYP+KT PSFY+VTNNSKERPDVWI+S
Sbjct: 485 PRRFVSFCRVGTGLTDEELDAVVNKLKPYFRKSEYPRKTAPSFYQVTNNSKERPDVWIES 544

Query: 179 PEKSIILSITSDIRTIKSEVFAAPYSL 259
           PEKSIILSITSDIRTIKSEVFAAPYSL
Sbjct: 545 PEKSIILSITSDIRTIKSEVFAAPYSL 571


>ref|XP_002866187.1| ATLIG4 [Arabidopsis lyrata subsp. lyrata]
           gi|297312022|gb|EFH42446.1| ATLIG4 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1221

 Score =  155 bits (393), Expect = 4e-36
 Identities = 75/87 (86%), Positives = 83/87 (95%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   PRRFMSFCRVGTGLSDDELDTLISKLNPYFRKNEYPKKTP-SFYEVTNNSKERPDVWIDS 178
           PRRFMSFCRVGTGLSDDEL+T++SKL PYFRKNE+PKK P SFY+VTN+SKERPDVWI+S
Sbjct: 489 PRRFMSFCRVGTGLSDDELNTVVSKLKPYFRKNEHPKKAPPSFYQVTNHSKERPDVWIES 548

Query: 179 PEKSIILSITSDIRTIKSEVFAAPYSL 259
           PEKSIILSITSDIRTI+SEVF APYSL
Sbjct: 549 PEKSIILSITSDIRTIRSEVFVAPYSL 575


>gb|EEE61635.1| hypothetical protein OsJ_16077 [Oryza sativa Japonica Group]
          Length = 1322

 Score =  155 bits (393), Expect = 4e-36
 Identities = 71/86 (82%), Positives = 82/86 (95%)
 Frame = +2

Query: 2   PRRFMSFCRVGTGLSDDELDTLISKLNPYFRKNEYPKKTPSFYEVTNNSKERPDVWIDSP 181
           P+RF+SFCRVGTGLSD+ELD L++KL P+FRKNEYPKK P FYEVTN+SKERPDVWI+SP
Sbjct: 513 PKRFLSFCRVGTGLSDEELDALVTKLKPHFRKNEYPKKPPRFYEVTNHSKERPDVWIESP 572

Query: 182 EKSIILSITSDIRTIKSEVFAAPYSL 259
           +KS+I+SITSDIRTIKSEVFAAPYSL
Sbjct: 573 DKSVIISITSDIRTIKSEVFAAPYSL 598


>gb|EEC77947.1| hypothetical protein OsI_17298 [Oryza sativa Indica Group]
          Length = 1322

 Score =  155 bits (393), Expect = 4e-36
 Identities = 71/86 (82%), Positives = 82/86 (95%)
 Frame = +2

Query: 2   PRRFMSFCRVGTGLSDDELDTLISKLNPYFRKNEYPKKTPSFYEVTNNSKERPDVWIDSP 181
           P+RF+SFCRVGTGLSD+ELD L++KL P+FRKNEYPKK P FYEVTN+SKERPDVWI+SP
Sbjct: 513 PKRFLSFCRVGTGLSDEELDALVTKLKPHFRKNEYPKKPPRFYEVTNHSKERPDVWIESP 572

Query: 182 EKSIILSITSDIRTIKSEVFAAPYSL 259
           +KS+I+SITSDIRTIKSEVFAAPYSL
Sbjct: 573 DKSVIISITSDIRTIKSEVFAAPYSL 598


>emb|CAH66777.1| OSIGBa0113I13.3 [Oryza sativa Indica Group]
          Length = 1281

 Score =  155 bits (393), Expect = 4e-36
 Identities = 71/86 (82%), Positives = 82/86 (95%)
 Frame = +2

Query: 2   PRRFMSFCRVGTGLSDDELDTLISKLNPYFRKNEYPKKTPSFYEVTNNSKERPDVWIDSP 181
           P+RF+SFCRVGTGLSD+ELD L++KL P+FRKNEYPKK P FYEVTN+SKERPDVWI+SP
Sbjct: 472 PKRFLSFCRVGTGLSDEELDALVTKLKPHFRKNEYPKKPPRFYEVTNHSKERPDVWIESP 531

Query: 182 EKSIILSITSDIRTIKSEVFAAPYSL 259
           +KS+I+SITSDIRTIKSEVFAAPYSL
Sbjct: 532 DKSVIISITSDIRTIKSEVFAAPYSL 557


>ref|XP_006653742.1| PREDICTED: putative DNA ligase 4-like [Oryza brachyantha]
          Length = 1310

 Score =  155 bits (391), Expect = 7e-36
 Identities = 71/86 (82%), Positives = 82/86 (95%)
 Frame = +2

Query: 2   PRRFMSFCRVGTGLSDDELDTLISKLNPYFRKNEYPKKTPSFYEVTNNSKERPDVWIDSP 181
           P+RF+SFCRVGTGLSD+ELD LI+KL P+FRKNEYPKK P FYEVTN+SKERPDVWI+SP
Sbjct: 499 PKRFLSFCRVGTGLSDEELDALITKLKPHFRKNEYPKKPPRFYEVTNHSKERPDVWIESP 558

Query: 182 EKSIILSITSDIRTIKSEVFAAPYSL 259
           +KS+I+SITSDIRTIKSEVFAAPY+L
Sbjct: 559 DKSVIISITSDIRTIKSEVFAAPYNL 584


>ref|XP_002448485.1| hypothetical protein SORBIDRAFT_06g027820 [Sorghum bicolor]
           gi|241939668|gb|EES12813.1| hypothetical protein
           SORBIDRAFT_06g027820 [Sorghum bicolor]
          Length = 1164

 Score =  154 bits (389), Expect = 1e-35
 Identities = 69/86 (80%), Positives = 80/86 (93%)
 Frame = +2

Query: 2   PRRFMSFCRVGTGLSDDELDTLISKLNPYFRKNEYPKKTPSFYEVTNNSKERPDVWIDSP 181
           P+RF+SFCRVGTGLSD+E D L++KL PYFRKNEYPKK P FYEVTNNSKERPDVWI+SP
Sbjct: 465 PKRFLSFCRVGTGLSDEERDALVTKLKPYFRKNEYPKKPPKFYEVTNNSKERPDVWIESP 524

Query: 182 EKSIILSITSDIRTIKSEVFAAPYSL 259
           +KS+I+S+TSDIRTIKSEVFA+PY L
Sbjct: 525 DKSVIISVTSDIRTIKSEVFASPYCL 550


>ref|XP_006282195.1| hypothetical protein CARUB_v10028461mg [Capsella rubella]
           gi|482550899|gb|EOA15093.1| hypothetical protein
           CARUB_v10028461mg [Capsella rubella]
          Length = 1203

 Score =  153 bits (387), Expect = 2e-35
 Identities = 74/87 (85%), Positives = 82/87 (94%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   PRRFMSFCRVGTGLSDDELDTLISKLNPYFRKNEYPKKTP-SFYEVTNNSKERPDVWIDS 178
           PRRFMSFCRVGTGLSD EL+T++SKL PYFRKNE+PKK P SFY+VTN+SKERPDVWI+S
Sbjct: 472 PRRFMSFCRVGTGLSDHELETVVSKLKPYFRKNEHPKKAPPSFYQVTNHSKERPDVWIES 531

Query: 179 PEKSIILSITSDIRTIKSEVFAAPYSL 259
           PEKSIILSITSDIRTI+SEVF APYSL
Sbjct: 532 PEKSIILSITSDIRTIRSEVFVAPYSL 558


>ref|XP_007014429.1| DNA ligase IV [Theobroma cacao] gi|508784792|gb|EOY32048.1| DNA
           ligase IV [Theobroma cacao]
          Length = 1195

 Score =  152 bits (385), Expect = 4e-35
 Identities = 73/87 (83%), Positives = 82/87 (94%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   PRRFMSFCRVGTGLSDDELDTLISKLNPYFRKNEYPKKT-PSFYEVTNNSKERPDVWIDS 178
           PRRF+SFCRVGTGL+DDEL+ +++KL PYFRK EYPKKT PSFY+VTNNSKERPDVWI+S
Sbjct: 486 PRRFVSFCRVGTGLADDELEAVVNKLKPYFRKYEYPKKTQPSFYQVTNNSKERPDVWIES 545

Query: 179 PEKSIILSITSDIRTIKSEVFAAPYSL 259
           PEKSIILSI SDIRTI+SEVFAAPYSL
Sbjct: 546 PEKSIILSINSDIRTIRSEVFAAPYSL 572


>ref|XP_002325262.2| DNA ligase IV family protein [Populus trichocarpa]
           gi|550318700|gb|EEF03827.2| DNA ligase IV family protein
           [Populus trichocarpa]
          Length = 1242

 Score =  152 bits (384), Expect = 5e-35
 Identities = 72/87 (82%), Positives = 82/87 (94%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   PRRFMSFCRVGTGLSDDELDTLISKLNPYFRKNEYPKKTP-SFYEVTNNSKERPDVWIDS 178
           PRRF+SFCRVG GLSD+ELDT++SKL PYFRKNEYPK +P SFY+VTNNSKERPDVWI++
Sbjct: 495 PRRFISFCRVGNGLSDEELDTVVSKLKPYFRKNEYPKNSPPSFYQVTNNSKERPDVWIEN 554

Query: 179 PEKSIILSITSDIRTIKSEVFAAPYSL 259
           P+KSIILSITSDIRTI SEVF+APYSL
Sbjct: 555 PDKSIILSITSDIRTISSEVFSAPYSL 581


>ref|XP_006474277.1| PREDICTED: DNA ligase 4-like isoform X1 [Citrus sinensis]
           gi|568840649|ref|XP_006474278.1| PREDICTED: DNA ligase
           4-like isoform X2 [Citrus sinensis]
          Length = 1174

 Score =  151 bits (382), Expect = 8e-35
 Identities = 72/87 (82%), Positives = 82/87 (94%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   PRRFMSFCRVGTGLSDDELDTLISKLNPYFRKNEYPKKTP-SFYEVTNNSKERPDVWIDS 178
           PRRF+SFCRVGTGLSD+ELD +++KL PYFRK EYPK+ P SFY+VTNNSKERPDVWI+S
Sbjct: 502 PRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES 561

Query: 179 PEKSIILSITSDIRTIKSEVFAAPYSL 259
           PEKSIILSITSDIRTI+SEVF+APYSL
Sbjct: 562 PEKSIILSITSDIRTIRSEVFSAPYSL 588


>ref|XP_006453240.1| hypothetical protein CICLE_v10007283mg [Citrus clementina]
           gi|568840651|ref|XP_006474279.1| PREDICTED: DNA ligase
           4-like isoform X3 [Citrus sinensis]
           gi|557556466|gb|ESR66480.1| hypothetical protein
           CICLE_v10007283mg [Citrus clementina]
          Length = 1159

 Score =  151 bits (382), Expect = 8e-35
 Identities = 72/87 (82%), Positives = 82/87 (94%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   PRRFMSFCRVGTGLSDDELDTLISKLNPYFRKNEYPKKTP-SFYEVTNNSKERPDVWIDS 178
           PRRF+SFCRVGTGLSD+ELD +++KL PYFRK EYPK+ P SFY+VTNNSKERPDVWI+S
Sbjct: 487 PRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES 546

Query: 179 PEKSIILSITSDIRTIKSEVFAAPYSL 259
           PEKSIILSITSDIRTI+SEVF+APYSL
Sbjct: 547 PEKSIILSITSDIRTIRSEVFSAPYSL 573


>ref|XP_006453239.1| hypothetical protein CICLE_v10007283mg [Citrus clementina]
           gi|557556465|gb|ESR66479.1| hypothetical protein
           CICLE_v10007283mg [Citrus clementina]
          Length = 824

 Score =  151 bits (382), Expect = 8e-35
 Identities = 72/87 (82%), Positives = 82/87 (94%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   PRRFMSFCRVGTGLSDDELDTLISKLNPYFRKNEYPKKTP-SFYEVTNNSKERPDVWIDS 178
           PRRF+SFCRVGTGLSD+ELD +++KL PYFRK EYPK+ P SFY+VTNNSKERPDVWI+S
Sbjct: 152 PRRFISFCRVGTGLSDEELDAVVTKLKPYFRKYEYPKRAPPSFYQVTNNSKERPDVWIES 211

Query: 179 PEKSIILSITSDIRTIKSEVFAAPYSL 259
           PEKSIILSITSDIRTI+SEVF+APYSL
Sbjct: 212 PEKSIILSITSDIRTIRSEVFSAPYSL 238