BLASTX nr result
ID: Cocculus22_contig00022618
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00022618
(710 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_197389.1| RNA-directed DNA polymerase (reverse transcript... 70 9e-10
gb|AAD12028.1| putative non-LTR retroelement reverse transcripta... 69 2e-09
ref|NP_176271.1| RNA-directed DNA polymerase (reverse transcript... 68 3e-09
dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like ... 66 4e-09
dbj|BAE98403.1| putative non-LTR reverse transcriptase [Arabidop... 66 5e-09
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 57 9e-09
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 64 1e-08
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 59 2e-08
ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204... 65 2e-08
emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|72678... 64 4e-08
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 63 1e-07
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 62 2e-07
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 62 2e-07
emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulga... 48 3e-07
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 56 3e-07
gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcrip... 59 4e-07
ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein A... 60 5e-07
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 60 5e-07
gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00... 60 9e-07
gb|ABD96948.1| hypothetical protein [Cleome spinosa] 60 9e-07
>ref|NP_197389.1| RNA-directed DNA polymerase (reverse transcriptase)-related family
protein [Arabidopsis thaliana]
gi|332005241|gb|AED92624.1| RNA-directed DNA polymerase
(reverse transcriptase)-related family protein
[Arabidopsis thaliana]
Length = 295
Score = 69.7 bits (169), Expect = 9e-10
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Frame = +2
Query: 272 TFSTCSAWEKVRAHHPKCNWEKVVWFPQ-----ASFTWRPFLKKNPCMQKLKELKIVSAD 436
+FS+ WE++R H P W KVVWF + + TW FL++ P +L+ +
Sbjct: 108 SFSSRDTWEQIRVHSPTVPWAKVVWFKEYIPRFSLITWMSFLERLPTRDRLRGWGMNIPS 167
Query: 437 NCVLCWSGAEIDKHLFFACPFSFKIW 514
+ VLC +G E HLFF C FS IW
Sbjct: 168 SWVLCSNGDETHAHLFFECSFSLAIW 193
>gb|AAD12028.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1447
Score = 68.6 bits (166), Expect = 2e-09
Identities = 48/161 (29%), Positives = 67/161 (41%), Gaps = 25/161 (15%)
Frame = +2
Query: 170 RNPLAKEIWDRCSS----TYCLPELEK-------------DEVIWSLNSS---RTFSTCS 289
R+ L E+WD S T L ++E D+V+W + FST
Sbjct: 1207 RDKLVAEVWDTHRSRRHITDYLNQVENVIATSKANRKEKADDVVWRGRNDIYKPQFSTRD 1266
Query: 290 AWEKVRAHHPKCNWEKVVWFPQAS-----FTWRPFLKKNPCMQKLKELKIVSADNCVLCW 454
W +R K W K VWF QA+ W L + ++ K VS+ +CV C
Sbjct: 1267 TWNNIRTTATKVTWYKGVWFYQATPKFSFCVWLAALDRLSTGDRMANWKGVSSGSCVFCN 1326
Query: 455 SGAEIDKHLFFACPFSFKIWTSTAKLCFQSTVYDSWEALGN 577
+ HLFF CP+S ++WT TAK + W L N
Sbjct: 1327 HPTKSRDHLFFNCPYSSEVWTVTAKNILTTRFTTDWHLLLN 1367
>ref|NP_176271.1| RNA-directed DNA polymerase (reverse transcriptase)-related protein
[Arabidopsis thaliana] gi|332195602|gb|AEE33723.1|
RNA-directed DNA polymerase (reverse
transcriptase)-related protein [Arabidopsis thaliana]
Length = 289
Score = 67.8 bits (164), Expect = 3e-09
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 9/147 (6%)
Frame = +2
Query: 158 LPNTRNPLAKEIWDRCSS-TYCLPELEKDEVIWSLNS--SRTFSTCSAWEKVRAHHPKCN 328
LP +R+ A+ I D S+ T P +D W + + FS+ W+ +R P+ +
Sbjct: 67 LPLSRSAPAQAIHDHISTITTPSPATIEDSFDWVVGGVVCQGFSSARTWDAIRPRAPELD 126
Query: 329 WEKVVWF----PQASFT-WRPFLKKNPCMQKLKELKIVSADNCVLCWSGAEIDKHLFFAC 493
W K VWF P+ +F W L + P Q+L + + +C LC E HL F+C
Sbjct: 127 WAKAVWFKGAVPKHAFNMWISQLDRLPTRQRLASWGHIQSFDCCLCTIETESRDHLLFSC 186
Query: 494 PFSFKIW-TSTAKLCFQSTVYDSWEAL 571
F+ ++W + ++LC + ++ SW L
Sbjct: 187 EFAAQVWRLAFSRLCPRQRLFCSWAEL 213
>dbj|BAB01431.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 637
Score = 66.2 bits (160), Expect(2) = 4e-09
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Frame = +2
Query: 233 EKDEVIWSLNSSR---TFSTCSAWEKVRAHHPKCNWEKVVWFPQAS-----FTWRPFLKK 388
E D +W +FS+ W+++R +C W + VWFP ++ TW F +
Sbjct: 244 ESDRSLWKQKEDSFKGSFSSPKTWQQIRTISNECEWYRGVWFPSSTPKYSFVTWLAFHNR 303
Query: 389 NPCMQKLKELKIVSADNCVLCWSGAEIDKHLFFACPFSFKIWTSTAKLCFQSTVYDSWEA 568
+L + + CV C E HLFF+CP+S +IW + AK SW
Sbjct: 304 LATGDRLYKWNSEARATCVFCDEELETRDHLFFSCPYSSQIWIALAKGLLNGRNVSSWSL 363
Query: 569 L 571
+
Sbjct: 364 I 364
Score = 21.2 bits (43), Expect(2) = 4e-09
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 624 YHVWEERNKRRFQNKSRQIEKIVDLI 701
+ +W ERN RR + K+ LI
Sbjct: 390 HSLWRERNGRRHGEPAIPASKLTKLI 415
>dbj|BAE98403.1| putative non-LTR reverse transcriptase [Arabidopsis thaliana]
Length = 278
Score = 66.2 bits (160), Expect(2) = 5e-09
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 8/121 (6%)
Frame = +2
Query: 233 EKDEVIWSLNSSR---TFSTCSAWEKVRAHHPKCNWEKVVWFPQAS-----FTWRPFLKK 388
E D +W +FS+ W+++R +C W + VWFP ++ TW F +
Sbjct: 76 ESDRSLWKQKEDSFKGSFSSPKTWQQIRTISNECEWYRGVWFPSSTPKYSFVTWLAFHNR 135
Query: 389 NPCMQKLKELKIVSADNCVLCWSGAEIDKHLFFACPFSFKIWTSTAKLCFQSTVYDSWEA 568
+L + + CV C E HLFF+CP+S +IW + AK SW
Sbjct: 136 LATGDRLYKWNSEARATCVFCDEELETRDHLFFSCPYSSQIWIALAKGLLNGRNVSSWSL 195
Query: 569 L 571
+
Sbjct: 196 I 196
Score = 21.2 bits (43), Expect(2) = 5e-09
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 624 YHVWEERNKRRFQNKSRQIEKIVDLI 701
+ +W ERN RR + K+ LI
Sbjct: 222 HSLWRERNGRRHGEPAIPASKLTKLI 247
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 57.4 bits (137), Expect(2) = 9e-09
Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
Frame = +2
Query: 266 SRTFSTCSAWEKVRAHHPKCNWEKVVWFPQAS-----FTWRPFLKKNPCMQKLKELKIVS 430
++ F T W VR H P+ NW K VWFP ++ W + ++K
Sbjct: 1333 NKRFITKVTWNNVRTHQPQQNWYKGVWFPYSTPKYSFLLWLTVQNRLSTGDRIKAWNSGQ 1392
Query: 431 ADNCVLCWSGAEIDKHLFFACPFSFKIWTSTAKLCFQSTVYDSWEAL 571
C LC + E HLFF+C ++ +W + + + W L
Sbjct: 1393 LVTCTLCNNAEETRDHLFFSCQYTSYVWEALTQRLLSTNYSRDWNRL 1439
Score = 28.9 bits (63), Expect(2) = 9e-09
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 624 YHVWEERNKRRFQNKSRQIEKIVDLI 701
YH+W ERN RR S +++ LI
Sbjct: 1465 YHIWRERNARRHGEISSPTNRLIKLI 1490
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 64.3 bits (155), Expect(2) = 1e-08
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 8/137 (5%)
Frame = +2
Query: 185 KEIWDRCSSTYCLPELEKDEVIWSLNSS---RTFSTCSAWEKVRAHHPKCNWEKVVWF-- 349
K+ WD + T +D+V+W S TFST W R+ + W KV+WF
Sbjct: 1012 KKSWDTRTET-------EDKVLWRGKSDVFRTTFSTRDTWHHTRSTSARVPWHKVIWFSH 1064
Query: 350 --PQASF-TWRPFLKKNPCMQKLKELKIVSADNCVLCWSGAEIDKHLFFACPFSFKIWTS 520
P+ SF +W + P ++ A +C+ C E HLFF C F+ IW
Sbjct: 1065 ATPKYSFCSWLAAHGRLPTGDRMINWANGIATDCIFCQGTLETRDHLFFTCSFTSVIWVD 1124
Query: 521 TAKLCFQSTVYDSWEAL 571
A+ F++ W+++
Sbjct: 1125 LARGIFKTQYTSHWQSI 1141
Score = 21.6 bits (44), Expect(2) = 1e-08
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +3
Query: 624 YHVWEERNKRRFQNKSRQIEKIVDLI 701
Y VW ERN RR ++V I
Sbjct: 1167 YIVWRERNGRRHGEPPNTASQLVGWI 1192
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 59.3 bits (142), Expect(2) = 2e-08
Identities = 39/125 (31%), Positives = 53/125 (42%), Gaps = 8/125 (6%)
Frame = +2
Query: 227 ELEKDEVIWSLNSS---RTFSTCSAWEKVRAHHPKCNWEKVVWF----PQASF-TWRPFL 382
ELE D ++W FST W +R + W K VWF P+ SF W
Sbjct: 742 ELE-DAILWRGKEDVFKARFSTKDTWNHIRTSSNQRAWHKGVWFAHATPKFSFCAWLAIR 800
Query: 383 KKNPCMQKLKELKIVSADNCVLCWSGAEIDKHLFFACPFSFKIWTSTAKLCFQSTVYDSW 562
+ ++ + CV C S E HLFF C +S +IWTS AK ++ W
Sbjct: 801 NRLSTGDRMMTWNNGTPTTCVFCSSPMETRDHLFFQCCYSSEIWTSIAKNVYKDRFSTKW 860
Query: 563 EALGN 577
A+ N
Sbjct: 861 SAVVN 865
Score = 26.2 bits (56), Expect(2) = 2e-08
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 624 YHVWEERNKRRFQNKSRQIEKIV 692
+ +W ERN RR KSR ++
Sbjct: 889 HSIWRERNSRRHGEKSRSASNLI 911
>ref|XP_004148188.1| PREDICTED: uncharacterized protein LOC101204314 [Cucumis sativus]
Length = 282
Score = 65.5 bits (158), Expect = 2e-08
Identities = 36/115 (31%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Frame = +2
Query: 188 EIWDRCSSTYCLPELEKDEVIWSLNSSRTFSTCSAWEKVRAHHPKCNWEKVVW----FPQ 355
+IWDR P +E D +W S +FS SAWE +R H + W ++W P+
Sbjct: 80 DIWDRVQGVRLSPSVE-DRWVWVPGSHDSFSITSAWETIRPHSSRVGWSGLLWGGGNIPK 138
Query: 356 ASF-TWRPFLKKNPCMQKLKELKIVSADNCVLCWSGAEIDKHLFFACPFSFKIWT 517
SF W + +L +C+LC E HLFF+C F ++IW+
Sbjct: 139 HSFCAWLAIRDRLGTRGRLSRWDRSIPLSCLLCGGNYESRDHLFFSCHFGWEIWS 193
>emb|CAB39942.1| putative protein [Arabidopsis thaliana] gi|7267871|emb|CAB78214.1|
putative protein [Arabidopsis thaliana]
Length = 473
Score = 63.5 bits (153), Expect(2) = 4e-08
Identities = 38/128 (29%), Positives = 53/128 (41%), Gaps = 14/128 (10%)
Frame = +2
Query: 236 KDEVIWSLNSSR---TFSTCSAWEKVRAHHPKCNWEKVVWFPQASFTWRPFLKKNPCMQK 406
+D +W +R FST W +R K W K VWF QA K CM
Sbjct: 271 EDRALWKGKENRFRSIFSTKDTWNHIRTVSNKVAWYKGVWFAQA------IPKHAFCMWL 324
Query: 407 LKELKIVSADN-----------CVLCWSGAEIDKHLFFACPFSFKIWTSTAKLCFQSTVY 553
++ + D C+LC E HLFF+CPF+ +IW AK + + Y
Sbjct: 325 AVHNRLSTGDRMTLWNMGVDATCILCNKALESRDHLFFSCPFATEIWEPLAKTIYNTCFY 384
Query: 554 DSWEALGN 577
W+ + N
Sbjct: 385 TDWQTIIN 392
Score = 20.8 bits (42), Expect(2) = 4e-08
Identities = 7/26 (26%), Positives = 13/26 (50%)
Frame = +3
Query: 624 YHVWEERNKRRFQNKSRQIEKIVDLI 701
Y +W ERN+R+ +++ I
Sbjct: 416 YTLWRERNERKHGASPNSSSRLISWI 441
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 62.8 bits (151), Expect = 1e-07
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Frame = +2
Query: 125 ISSLRSNVS*NLPNTRNPLAKEIWDRCSSTYCLPELEKDEVI---WSLNS--SRTFSTCS 289
++S S LP +R+ AK I D T +P +++V WS+N + FS
Sbjct: 979 VASAFSEDGWRLPVSRSAPAKGIHDHLC-TVPVPSTAQEDVDRYEWSVNGFLCQGFSAAK 1037
Query: 290 AWEKVRAHHPKCNWEKVVWF----PQASFT-WRPFLKKNPCMQKLKELKIVSADNCVLCW 454
WE +R +W +WF P+ +F W L + Q+L + +D CVLC
Sbjct: 1038 TWEAIRPKATVKSWASSIWFKGAVPKYAFNMWVSHLNRLLTRQRLASWGHIQSDACVLCS 1097
Query: 455 SGAEIDKHLFFACPFSFKIWTST-AKLCFQSTVYDSWEAL 571
+E HL C FS ++W ++C + ++ SW L
Sbjct: 1098 FASESRDHLLLICEFSAQVWRLVFRRICPRQRLFSSWSEL 1137
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 61.6 bits (148), Expect = 2e-07
Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Frame = +2
Query: 224 PELEKDEVIWSLNS--SRTFSTCSAWEKVRAHHPKCNWEKVVWF----PQASFT-WRPFL 382
P + D W ++ + FS WE +R P W K VWF P+ +F W L
Sbjct: 873 PLMVSDSYSWCVDDVDCQGFSAAKTWEVLRPRRPVKRWAKSVWFKGAVPKHAFNFWTAQL 932
Query: 383 KKNPCMQKLKELKIVSADNCVLCWSGAEIDKHLFFACPFSFKIWTST-AKLCFQSTVYDS 559
+ P Q+L +VS+ C LC E HL C FS ++W +LC + + +
Sbjct: 933 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 992
Query: 560 WEAL 571
W L
Sbjct: 993 WAEL 996
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 61.6 bits (148), Expect = 2e-07
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Frame = +2
Query: 272 TFSTCSAWEKVRAHHPKCNWEKVVWF----PQASF-TWRPFLKKNPCMQKLKELKIVSAD 436
+FS+ W+++R+ +C+W + VWF P+ SF TW F + K+ + +
Sbjct: 1184 SFSSSKTWQQIRSISLRCDWYRGVWFSASTPKYSFVTWLAFHNRLTTSDKICKWNSGARY 1243
Query: 437 NCVLCWSGAEIDKHLFFACPFSFKIWTSTAK 529
+CV C E HLFF+CP+S +W S K
Sbjct: 1244 DCVFCGEELETRDHLFFSCPYSSHVWFSLTK 1274
>emb|CCA66222.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1383
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 33/102 (32%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Frame = +2
Query: 239 DEVIWSLNSSRTFSTCSAW------EKVRAHHP-KCNWEKVVWFPQASFTWRPFLKKNPC 397
D ++W+ N S FS SA K +H K W +V F W L+K
Sbjct: 1014 DYLVWTPNKSGVFSVKSATLELAKCSKFSSHEIIKGIWRGLVPHRVEIFCWLALLEKINT 1073
Query: 398 MQKLKELKIVSADN--CVLCWSGAEIDKHLFFACPFSFKIWT 517
KL + I+ ++ CV C G E HL C FS+K+WT
Sbjct: 1074 KSKLGRIGIIPIEDAVCVFCNIGLETTNHLLLHCEFSWKLWT 1115
Score = 33.1 bits (74), Expect(2) = 3e-07
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 612 FFFFYHVWEERNKRRFQNKSRQIEKIVDLI 701
F + +W+ERN R F N + +E+I DLI
Sbjct: 1156 FIIIWSLWKERNSRIFNNSNSSLEEIQDLI 1185
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 55.8 bits (133), Expect(2) = 3e-07
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 11/123 (8%)
Frame = +2
Query: 236 KDEVIWSLNSS---RTFSTCSAWEKVRAHHPKCNWEKVVWFPQAS-----FTWRPFLKKN 391
+D V+W + FST W ++A +W K VWF A+ TW +
Sbjct: 669 EDTVLWRGKNDVFKPHFSTRDTWHLIKATSSTVSWHKGVWFRHATPKYALCTWLAIHNRL 728
Query: 392 PC---MQKLKELKIVSADNCVLCWSGAEIDKHLFFACPFSFKIWTSTAKLCFQSTVYDSW 562
P M K VS NCVLC + ++ +HLFF+C ++ +W + AK +++ W
Sbjct: 729 PTGDRMLKWNSSGSVSG-NCVLCTNNSKTLEHLFFSCSYASTVWAALAKGIWKTRYSTRW 787
Query: 563 EAL 571
L
Sbjct: 788 SHL 790
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3
Query: 624 YHVWEERNKRR 656
YHVW ERN RR
Sbjct: 816 YHVWRERNGRR 826
>gb|AAC13599.1| similar to reverse transcriptase (Pfam: transcript_fact.hmm, score:
72.31) [Arabidopsis thaliana]
Length = 928
Score = 59.3 bits (142), Expect(2) = 4e-07
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 15/148 (10%)
Frame = +2
Query: 173 NPLAKEIWDRCS--------STYCLPELEK--DEVIWSLNSSRTFSTCSAWEKVRAHHPK 322
N ++ +W C+ C+ E++K +WS + +WE + K
Sbjct: 700 NLISSTLWSICNFWMAAFRLPRACIREIDKLCSAFLWSGTELSSNKAKVSWEAI-CKPKK 758
Query: 323 CNWEKVVWF----PQASF-TWRPFLKKNPCMQKLKELKIVSADNCVLCWSGAEIDKHLFF 487
W K VWF P+ SF W K Q+++ + S+ CVLC + E HLFF
Sbjct: 759 EAWHKGVWFAHETPKHSFCVWLAIWNKLSTGQRMQHWNLQSSVGCVLCNNNLETRDHLFF 818
Query: 488 ACPFSFKIWTSTAKLCFQSTVYDSWEAL 571
+C ++ IW + AK Q + W+ +
Sbjct: 819 SCAYTSGIWEALAKNLLQRSYTTDWQTI 846
Score = 21.6 bits (44), Expect(2) = 4e-07
Identities = 8/26 (30%), Positives = 12/26 (46%)
Frame = +3
Query: 624 YHVWEERNKRRFQNKSRQIEKIVDLI 701
Y +W ERN RR +++ I
Sbjct: 872 YTIWRERNGRRHGETPNPAARLIQWI 897
>ref|XP_004163799.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
sativus]
Length = 288
Score = 60.5 bits (145), Expect = 5e-07
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Frame = +2
Query: 188 EIWDRCSSTYCLPELEKDEVIWSLNSSRTFSTCSAWEKVRAHHPKCNWEKVVW----FPQ 355
+IWDR P +E D + S +FS SA E +R H + W ++W P+
Sbjct: 155 DIWDRIQGVRPSPSVE-DMWVRVPGSHESFSIVSACEAIRPHSSRVGWSGLLWGGGNIPK 213
Query: 356 ASF-TWRPFLKKNPCMQKLKELKIVSADNCVLCWSGAEIDKHLFFACPFSFKIWT 517
SF TW + +L +C+LC E HLFF CPF ++IW+
Sbjct: 214 HSFYTWLAIKDRLGTRDRLSRWDSSIPLSCILCGRNYESRDHLFFPCPFGWEIWS 268
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 60.5 bits (145), Expect = 5e-07
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 8/124 (6%)
Frame = +2
Query: 224 PELEKDEVIWSLNS--SRTFSTCSAWEKVRAHHPKCNWEKVVWF----PQASFT-WRPFL 382
P + D W ++ + FS WE +R P W + VWF P+ +F W L
Sbjct: 873 PLMVSDSYSWCVDDVDCQGFSAAKTWEVLRPRRPVKRWARSVWFKGAVPKHAFNFWTAQL 932
Query: 383 KKNPCMQKLKELKIVSADNCVLCWSGAEIDKHLFFACPFSFKIWTST-AKLCFQSTVYDS 559
+ P Q+L +VS+ C LC E HL C FS ++W +LC + + +
Sbjct: 933 NRLPTRQRLVSWGLVSSAECCLCSFDTETRDHLLLLCDFSSQVWRMVFLRLCPRQRLLCT 992
Query: 560 WEAL 571
W L
Sbjct: 993 WAEL 996
>gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis
thaliana]
Length = 1253
Score = 59.7 bits (143), Expect = 9e-07
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 10/131 (7%)
Frame = +2
Query: 209 STYCLP--ELEKDEVIWSLN--SSRTFSTCSAWEKVRAHHPKCNWEKVVWF----PQASF 364
+T LP + D +W ++ + FS WE +R P +W K VWF P+ +F
Sbjct: 878 TTIALPCFDSSPDTFVWIVDDFTCHGFSAARTWEAMRPKKPVKDWTKSVWFKGSVPKHAF 937
Query: 365 T-WRPFLKKNPCMQKLKELKIVSADNCVLCWSGAEIDKHLFFACPFSFKIWTST-AKLCF 538
W L + P Q+L + + +C LC S E HL C FS IW +L
Sbjct: 938 NMWVSHLNRLPTRQRLAAWGVTTTTDCCLCSSRPESRDHLLLYCVFSAVIWKLVFFRLTP 997
Query: 539 QSTVYDSWEAL 571
+++SW L
Sbjct: 998 SQAIFNSWAEL 1008
>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
Length = 539
Score = 59.7 bits (143), Expect = 9e-07
Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 8/113 (7%)
Frame = +2
Query: 224 PELEKDEVIWSLNSSRT---FSTCSAWEKVRAHHPKCNWEKVVWFP-----QASFTWRPF 379
P+ D +W FS+ W R H W +VWFP A W+
Sbjct: 390 PDGPSDSALWKYKEEDFRPYFSSSRTWNLTRTVHVIAPWSSIVWFPLAIPRHAFLHWQVM 449
Query: 380 LKKNPCMQKLKELKIVSADNCVLCWSGAEIDKHLFFACPFSFKIWTSTAKLCF 538
L + P +L++ I S C LC E +HLFF C ++ +W ++C+
Sbjct: 450 LFRLPTKDRLQQWGITSDATCRLCDGEDESHQHLFFGCTYASHLWRHFGEVCW 502