BLASTX nr result
ID: Cocculus22_contig00022479
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00022479
(310 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD27881.1|AF139469_1 ribulose-1,5-bisphosphate carboxylase s... 160 1e-37
gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subun... 160 2e-37
gb|EYU38174.1| hypothetical protein MIMGU_mgv1a014707mg [Mimulus... 159 3e-37
gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subun... 159 5e-37
gb|ACS68693.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 159 5e-37
gb|ABQ42164.1| ribulose bisphosphate carboxylase small chain (Ru... 159 5e-37
gb|ABQ42089.1| ribulose bisphosphate carboxylase small chain (Ru... 159 5e-37
gb|EYU38172.1| hypothetical protein MIMGU_mgv1a014686mg [Mimulus... 157 1e-36
gb|ABQ42090.1| ribulose bisphosphate carboxylase small chain (Ru... 157 1e-36
gb|EYU45444.1| hypothetical protein MIMGU_mgv1a014737mg [Mimulus... 157 2e-36
sp|Q96542.1|RBS_BETVE RecName: Full=Ribulose bisphosphate carbox... 156 2e-36
gb|ABK96431.1| unknown [Populus trichocarpa x Populus deltoides] 156 2e-36
sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carbox... 155 7e-36
ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chai... 155 7e-36
gb|ABC86738.1| ribulose-1,5-bisphophate carboxylase/oxygenase sm... 154 9e-36
gb|AAW31667.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s... 154 1e-35
gb|EPS63610.1| ribulose bisphosphate carboxylase small chain, pa... 154 2e-35
ref|XP_007215051.1| hypothetical protein PRUPE_ppa012123mg [Prun... 154 2e-35
sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carbox... 154 2e-35
gb|AAO25119.1| ribulose-1,5-bisphosphate carboxylase small subun... 154 2e-35
>gb|AAD27881.1|AF139469_1 ribulose-1,5-bisphosphate carboxylase small subunit [Vigna radiata]
Length = 181
Score = 160 bits (406), Expect = 1e-37
Identities = 75/102 (73%), Positives = 84/102 (82%)
Frame = +3
Query: 3 GLKSTAAFPTSTRKSADITTIANNGGRVSCMKVWPTEGLKKFETLSYLPPLTTEQLLKEV 182
GLKS FPT + + DIT++ANNGGRV CM+VWPT G KKFETLSYLP LT EQL KEV
Sbjct: 28 GLKSLGGFPTR-KTNNDITSVANNGGRVQCMQVWPTIGKKKFETLSYLPDLTEEQLGKEV 86
Query: 183 EFLLREDLVPCLEFELDPKNAFPHRENNRSPGYYDGRYWTMW 308
++LLR +PCLEFEL K+AFPHRENNRSPGYYDGRYWTMW
Sbjct: 87 DYLLRSGWIPCLEFELSHKDAFPHRENNRSPGYYDGRYWTMW 128
>gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subunit [Jatropha
curcas]
Length = 181
Score = 160 bits (404), Expect = 2e-37
Identities = 77/102 (75%), Positives = 86/102 (84%)
Frame = +3
Query: 3 GLKSTAAFPTSTRKSADITTIANNGGRVSCMKVWPTEGLKKFETLSYLPPLTTEQLLKEV 182
GLKSTA FP + + + DIT+IA NGGRV CMKVWPT+GLKKFETLSYLPPLT EQL KEV
Sbjct: 30 GLKSTAGFP-ARKTTNDITSIAGNGGRVQCMKVWPTQGLKKFETLSYLPPLTREQLAKEV 88
Query: 183 EFLLREDLVPCLEFELDPKNAFPHRENNRSPGYYDGRYWTMW 308
E+LLR VPCLEFEL+ + F +RENNRSPGYYDGRYWTMW
Sbjct: 89 EYLLRSGWVPCLEFELE--HGFVYRENNRSPGYYDGRYWTMW 128
>gb|EYU38174.1| hypothetical protein MIMGU_mgv1a014707mg [Mimulus guttatus]
Length = 181
Score = 159 bits (403), Expect = 3e-37
Identities = 75/102 (73%), Positives = 89/102 (87%)
Frame = +3
Query: 3 GLKSTAAFPTSTRKSADITTIANNGGRVSCMKVWPTEGLKKFETLSYLPPLTTEQLLKEV 182
GLKST+AFP +TRK+ADITTIA NGGRVSCMKVWPT KK+ETLSYLPPLT EQL+KEV
Sbjct: 30 GLKSTSAFP-ATRKTADITTIATNGGRVSCMKVWPTVNNKKYETLSYLPPLTREQLIKEV 88
Query: 183 EFLLREDLVPCLEFELDPKNAFPHRENNRSPGYYDGRYWTMW 308
++LLR L+PC+EFEL+ + F +R++N SPGYYDGRYWTMW
Sbjct: 89 DYLLRNKLIPCIEFELE--HGFVYRQHNSSPGYYDGRYWTMW 128
>gb|AAA33866.1| ribulose 1,5-bisphosphate carboxylase small subunit [Malus
domestica x Pyrus communis]
Length = 179
Score = 159 bits (401), Expect = 5e-37
Identities = 76/102 (74%), Positives = 89/102 (87%)
Frame = +3
Query: 3 GLKSTAAFPTSTRKSADITTIANNGGRVSCMKVWPTEGLKKFETLSYLPPLTTEQLLKEV 182
GLKS++AFP TRKS DIT+IA+NGGRV CM+VWP GLKKFETLSYLPPL+TE L KEV
Sbjct: 28 GLKSSSAFPV-TRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSTESLAKEV 86
Query: 183 EFLLREDLVPCLEFELDPKNAFPHRENNRSPGYYDGRYWTMW 308
++LLR++ VPCLEFEL+ + F +RENNRSPGYYDGRYWTMW
Sbjct: 87 DYLLRKNWVPCLEFELE--HGFVYRENNRSPGYYDGRYWTMW 126
>gb|ACS68693.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Sonneratia alba] gi|241865463|gb|ACS68764.1|
ribulose-1,5-bisphosphate carboxylase/oxygenase small
subunit [Sonneratia alba]
Length = 173
Score = 159 bits (401), Expect = 5e-37
Identities = 74/102 (72%), Positives = 88/102 (86%)
Frame = +3
Query: 3 GLKSTAAFPTSTRKSADITTIANNGGRVSCMKVWPTEGLKKFETLSYLPPLTTEQLLKEV 182
GLKS++AFPT TRK+ADIT++A+NGGRV CM+VWP EGLKKFETLSYLP LT EQL+KE+
Sbjct: 23 GLKSSSAFPT-TRKTADITSLASNGGRVQCMQVWPPEGLKKFETLSYLPDLTREQLIKEI 81
Query: 183 EFLLREDLVPCLEFELDPKNAFPHRENNRSPGYYDGRYWTMW 308
E+L+R PCLEF P A+P+REN+RSPGYYDGRYWTMW
Sbjct: 82 EYLIRNGWFPCLEFSC-PAFAYPYRENHRSPGYYDGRYWTMW 122
>gb|ABQ42164.1| ribulose bisphosphate carboxylase small chain (RuBisCO small
subunit) [Sonneratia ovata]
Length = 178
Score = 159 bits (401), Expect = 5e-37
Identities = 74/102 (72%), Positives = 88/102 (86%)
Frame = +3
Query: 3 GLKSTAAFPTSTRKSADITTIANNGGRVSCMKVWPTEGLKKFETLSYLPPLTTEQLLKEV 182
GLKS++AFPT TRK+ADIT++A+NGGRV CM+VWP EGLKKFETLSYLP LT EQL+KE+
Sbjct: 24 GLKSSSAFPT-TRKTADITSLASNGGRVQCMQVWPPEGLKKFETLSYLPDLTREQLIKEI 82
Query: 183 EFLLREDLVPCLEFELDPKNAFPHRENNRSPGYYDGRYWTMW 308
E+L+R PCLEF P A+P+REN+RSPGYYDGRYWTMW
Sbjct: 83 EYLIRNGWFPCLEFSC-PAFAYPYRENHRSPGYYDGRYWTMW 123
>gb|ABQ42089.1| ribulose bisphosphate carboxylase small chain (RuBisCO small
subunit) [Sonneratia alba]
Length = 178
Score = 159 bits (401), Expect = 5e-37
Identities = 74/102 (72%), Positives = 88/102 (86%)
Frame = +3
Query: 3 GLKSTAAFPTSTRKSADITTIANNGGRVSCMKVWPTEGLKKFETLSYLPPLTTEQLLKEV 182
GLKS++AFPT TRK+ADIT++A+NGGRV CM+VWP EGLKKFETLSYLP LT EQL+KE+
Sbjct: 24 GLKSSSAFPT-TRKTADITSLASNGGRVQCMQVWPPEGLKKFETLSYLPDLTREQLIKEI 82
Query: 183 EFLLREDLVPCLEFELDPKNAFPHRENNRSPGYYDGRYWTMW 308
E+L+R PCLEF P A+P+REN+RSPGYYDGRYWTMW
Sbjct: 83 EYLIRNGWFPCLEFSC-PAFAYPYRENHRSPGYYDGRYWTMW 123
>gb|EYU38172.1| hypothetical protein MIMGU_mgv1a014686mg [Mimulus guttatus]
Length = 181
Score = 157 bits (397), Expect = 1e-36
Identities = 75/102 (73%), Positives = 87/102 (85%)
Frame = +3
Query: 3 GLKSTAAFPTSTRKSADITTIANNGGRVSCMKVWPTEGLKKFETLSYLPPLTTEQLLKEV 182
GLKST+AFP +TRK+ADITTIA NGGRVSCMKVWPT KK+ETLSYLPPLT EQL+KEV
Sbjct: 30 GLKSTSAFP-ATRKTADITTIATNGGRVSCMKVWPTVNNKKYETLSYLPPLTREQLIKEV 88
Query: 183 EFLLREDLVPCLEFELDPKNAFPHRENNRSPGYYDGRYWTMW 308
++LLR L+PC+EFEL+ + F R+ N SPGYYDGRYWTMW
Sbjct: 89 DYLLRNKLIPCIEFELE--HGFVFRQYNSSPGYYDGRYWTMW 128
>gb|ABQ42090.1| ribulose bisphosphate carboxylase small chain (RuBisCO small
subunit) [Sonneratia apetala]
Length = 178
Score = 157 bits (397), Expect = 1e-36
Identities = 73/102 (71%), Positives = 88/102 (86%)
Frame = +3
Query: 3 GLKSTAAFPTSTRKSADITTIANNGGRVSCMKVWPTEGLKKFETLSYLPPLTTEQLLKEV 182
GLKS++AFPT TRK+ADIT++A+NGGRV CM+VWP EGLKKFETLSYLP L+ EQL+KE+
Sbjct: 24 GLKSSSAFPT-TRKTADITSLASNGGRVQCMQVWPPEGLKKFETLSYLPDLSREQLIKEI 82
Query: 183 EFLLREDLVPCLEFELDPKNAFPHRENNRSPGYYDGRYWTMW 308
E+L+R PCLEF P A+P+REN+RSPGYYDGRYWTMW
Sbjct: 83 EYLIRNGWFPCLEFSC-PAFAYPYRENHRSPGYYDGRYWTMW 123
>gb|EYU45444.1| hypothetical protein MIMGU_mgv1a014737mg [Mimulus guttatus]
Length = 180
Score = 157 bits (396), Expect = 2e-36
Identities = 75/102 (73%), Positives = 87/102 (85%)
Frame = +3
Query: 3 GLKSTAAFPTSTRKSADITTIANNGGRVSCMKVWPTEGLKKFETLSYLPPLTTEQLLKEV 182
GLKS+ AFP +TRKSADITTIA+NGGRVSCMKVWPT KK+ETLSYLPPLT EQL+KEV
Sbjct: 29 GLKSSVAFP-ATRKSADITTIASNGGRVSCMKVWPTVNNKKYETLSYLPPLTREQLIKEV 87
Query: 183 EFLLREDLVPCLEFELDPKNAFPHRENNRSPGYYDGRYWTMW 308
++LLR L+PC+EFEL+ + F R+ N SPGYYDGRYWTMW
Sbjct: 88 DYLLRNKLIPCIEFELE--HGFVFRQYNSSPGYYDGRYWTMW 127
>sp|Q96542.1|RBS_BETVE RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|1536889|emb|CAA69102.1|
ribulose-bisphosphate carboxylase [Betula pendula]
Length = 182
Score = 156 bits (395), Expect = 2e-36
Identities = 71/101 (70%), Positives = 89/101 (88%)
Frame = +3
Query: 6 LKSTAAFPTSTRKSADITTIANNGGRVSCMKVWPTEGLKKFETLSYLPPLTTEQLLKEVE 185
LKST+AFP + + + DIT+IA+NGGRV CM+VWP GLKKFETLSYLPPL++EQL KEV+
Sbjct: 31 LKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVD 90
Query: 186 FLLREDLVPCLEFELDPKNAFPHRENNRSPGYYDGRYWTMW 308
+LLR++L+PCLEFEL+ + F +RE+NRSPGYYDGRYWTMW
Sbjct: 91 YLLRKNLIPCLEFELE--HGFVYREHNRSPGYYDGRYWTMW 129
>gb|ABK96431.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 182
Score = 156 bits (395), Expect = 2e-36
Identities = 73/102 (71%), Positives = 85/102 (83%)
Frame = +3
Query: 3 GLKSTAAFPTSTRKSADITTIANNGGRVSCMKVWPTEGLKKFETLSYLPPLTTEQLLKEV 182
GLKSTAAFP STRK+ DIT+IA+NGGRV CM+VWP GLKKFETLSYLP LT E+L KE+
Sbjct: 30 GLKSTAAFPVSTRKANDITSIASNGGRVQCMQVWPPTGLKKFETLSYLPDLTEEELAKEI 89
Query: 183 EFLLREDLVPCLEFELDPKNAFPHRENNRSPGYYDGRYWTMW 308
++LLR VPCLEFEL+ + HRE++ SPGYYDGRYWTMW
Sbjct: 90 DYLLRSKWVPCLEFELE--KGWVHREHHSSPGYYDGRYWTMW 129
>sp|P24007.1|RBS_PYRPY RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|218021|dbj|BAA00450.1| RuBisCO small
subunit [Pyrus pyrifolia var. culta]
Length = 183
Score = 155 bits (391), Expect = 7e-36
Identities = 74/102 (72%), Positives = 88/102 (86%)
Frame = +3
Query: 3 GLKSTAAFPTSTRKSADITTIANNGGRVSCMKVWPTEGLKKFETLSYLPPLTTEQLLKEV 182
GLKS++AFP TRKS DIT+IA+NGGRV CM+VWP GLKKFETLSYLPPL++E L KEV
Sbjct: 32 GLKSSSAFPV-TRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKEV 90
Query: 183 EFLLREDLVPCLEFELDPKNAFPHRENNRSPGYYDGRYWTMW 308
++LLR++ VPCLEFEL+ F +REN+RSPGYYDGRYWTMW
Sbjct: 91 DYLLRKNWVPCLEFELE--TGFVYRENHRSPGYYDGRYWTMW 130
>ref|XP_002532149.1| Ribulose bisphosphate carboxylase small chain, chloroplast
precursor, putative [Ricinus communis]
gi|223528159|gb|EEF30223.1| Ribulose bisphosphate
carboxylase small chain, chloroplast precursor, putative
[Ricinus communis]
Length = 185
Score = 155 bits (391), Expect = 7e-36
Identities = 73/102 (71%), Positives = 84/102 (82%)
Frame = +3
Query: 3 GLKSTAAFPTSTRKSADITTIANNGGRVSCMKVWPTEGLKKFETLSYLPPLTTEQLLKEV 182
GLKST+AFP + + + DITT+ANNGGRV CM+VWP G KKFETLSYLP LT EQL KEV
Sbjct: 30 GLKSTSAFPVTRKTNTDITTLANNGGRVQCMQVWPPLGKKKFETLSYLPDLTREQLAKEV 89
Query: 183 EFLLREDLVPCLEFELDPKNAFPHRENNRSPGYYDGRYWTMW 308
E+LLR+ VPCLEFEL+ + F +REN RSPGYYDGRYWTMW
Sbjct: 90 EYLLRKGWVPCLEFELE--HGFVYRENARSPGYYDGRYWTMW 129
>gb|ABC86738.1| ribulose-1,5-bisphophate carboxylase/oxygenase small subunit [Vitis
pseudoreticulata]
Length = 180
Score = 154 bits (390), Expect = 9e-36
Identities = 73/103 (70%), Positives = 86/103 (83%), Gaps = 1/103 (0%)
Frame = +3
Query: 3 GLKSTAAFPTSTRKSADITTIANNGGRVSCMKVWPTEGLKKFETLSYLPPLTTEQLLKEV 182
GLKS + FP + + + DIT+IA+NGGRV CMKVWPTEGL KFETLSYLPPLT EQL KEV
Sbjct: 30 GLKSLSTFPGTRKANTDITSIASNGGRVRCMKVWPTEGLMKFETLSYLPPLTDEQLSKEV 89
Query: 183 EFLLREDLVPCLEF-ELDPKNAFPHRENNRSPGYYDGRYWTMW 308
++LLR + +PCLEF +L P +PHRE+NRSPGYYDGRYWTMW
Sbjct: 90 DYLLRMNWIPCLEFTKLYP---YPHREHNRSPGYYDGRYWTMW 129
>gb|AAW31667.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Ammopiptanthus mongolicus]
Length = 174
Score = 154 bits (389), Expect = 1e-35
Identities = 73/102 (71%), Positives = 83/102 (81%)
Frame = +3
Query: 3 GLKSTAAFPTSTRKSADITTIANNGGRVSCMKVWPTEGLKKFETLSYLPPLTTEQLLKEV 182
GLKS A+FP + ++DITTIANNGGRV CM VWP G KKFETLSYLPPL+ E L KEV
Sbjct: 20 GLKSMASFPVPRKVNSDITTIANNGGRVQCMLVWPPLGRKKFETLSYLPPLSIESLTKEV 79
Query: 183 EFLLREDLVPCLEFELDPKNAFPHRENNRSPGYYDGRYWTMW 308
E+LLR+ VPCLEFEL+ + F +RENNRSPGYYDGRYWTMW
Sbjct: 80 EYLLRKGWVPCLEFELE--HGFVYRENNRSPGYYDGRYWTMW 119
>gb|EPS63610.1| ribulose bisphosphate carboxylase small chain, partial [Genlisea
aurea]
Length = 173
Score = 154 bits (388), Expect = 2e-35
Identities = 72/102 (70%), Positives = 84/102 (82%)
Frame = +3
Query: 3 GLKSTAAFPTSTRKSADITTIANNGGRVSCMKVWPTEGLKKFETLSYLPPLTTEQLLKEV 182
GLKS A FP S +KS DIT++ANNGGRV CM+VWPT G+KKFETLSYLP LT EQL KE+
Sbjct: 26 GLKSAAGFPVS-KKSNDITSVANNGGRVQCMQVWPTVGVKKFETLSYLPELTREQLAKEI 84
Query: 183 EFLLREDLVPCLEFELDPKNAFPHRENNRSPGYYDGRYWTMW 308
++L+R +PCLEFEL P F +REN+RSPGYYDGRYWTMW
Sbjct: 85 DYLIRSKWIPCLEFELGP---FVYRENSRSPGYYDGRYWTMW 123
>ref|XP_007215051.1| hypothetical protein PRUPE_ppa012123mg [Prunus persica]
gi|462411201|gb|EMJ16250.1| hypothetical protein
PRUPE_ppa012123mg [Prunus persica]
Length = 183
Score = 154 bits (388), Expect = 2e-35
Identities = 73/102 (71%), Positives = 86/102 (84%)
Frame = +3
Query: 3 GLKSTAAFPTSTRKSADITTIANNGGRVSCMKVWPTEGLKKFETLSYLPPLTTEQLLKEV 182
GLKS +AFP +K+ DIT+IA+NGGRV CMKVWPT GLKKFETLSYLPPL+ E L KEV
Sbjct: 32 GLKSASAFP-GAKKTNDITSIASNGGRVQCMKVWPTVGLKKFETLSYLPPLSPESLAKEV 90
Query: 183 EFLLREDLVPCLEFELDPKNAFPHRENNRSPGYYDGRYWTMW 308
++LLR++ VPCLEFEL+ F +REN+RSPGYYDGRYWTMW
Sbjct: 91 DYLLRKNWVPCLEFELE--KGFVYRENHRSPGYYDGRYWTMW 130
>sp|Q02980.1|RBS_MALSP RecName: Full=Ribulose bisphosphate carboxylase small chain,
chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor gi|19581|emb|CAA46475.1| ribulose bisphosphate
carboxylase [Malus sp.]
Length = 183
Score = 154 bits (388), Expect = 2e-35
Identities = 74/102 (72%), Positives = 88/102 (86%)
Frame = +3
Query: 3 GLKSTAAFPTSTRKSADITTIANNGGRVSCMKVWPTEGLKKFETLSYLPPLTTEQLLKEV 182
GLKS++A P TRKS DIT+IA+NGGRV CM+VWP GLKKFETLSYLPPL+TE L KEV
Sbjct: 32 GLKSSSASPV-TRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSTESLAKEV 90
Query: 183 EFLLREDLVPCLEFELDPKNAFPHRENNRSPGYYDGRYWTMW 308
++LLR++ VPCLEFEL+ + F +REN+RSPGYYDGRYWTMW
Sbjct: 91 DYLLRKNWVPCLEFELE--HGFVYRENHRSPGYYDGRYWTMW 130
>gb|AAO25119.1| ribulose-1,5-bisphosphate carboxylase small subunit [Chrysanthemum
x morifolium]
Length = 179
Score = 154 bits (388), Expect = 2e-35
Identities = 73/102 (71%), Positives = 83/102 (81%)
Frame = +3
Query: 3 GLKSTAAFPTSTRKSADITTIANNGGRVSCMKVWPTEGLKKFETLSYLPPLTTEQLLKEV 182
GLKS AFP T+KS D +++ +NGGRV CMKVWP GLKK+ETLSYLPPLT QL KEV
Sbjct: 28 GLKSNVAFPV-TKKSNDFSSLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKEV 86
Query: 183 EFLLREDLVPCLEFELDPKNAFPHRENNRSPGYYDGRYWTMW 308
E+LLR VPCLEFEL+ + FP+RENNRSPGYYDGRYWTMW
Sbjct: 87 EYLLRNKWVPCLEFELE--HGFPYRENNRSPGYYDGRYWTMW 126