BLASTX nr result
ID: Cocculus22_contig00022360
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cocculus22_contig00022360
(629 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera] 295 8e-78
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera] 291 1e-76
emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera] 270 3e-70
ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660... 229 4e-58
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc... 225 1e-56
gb|AGV40508.1| hypothetical protein [Phaseolus vulgaris] 223 4e-56
gb|AAR88589.1| putative copia-like retrotransposon protein [Oryz... 221 1e-55
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 218 9e-55
gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Ho... 217 2e-54
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera] 216 4e-54
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 213 3e-53
gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc... 213 5e-53
gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group] 213 5e-53
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 212 6e-53
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 212 6e-53
emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera] 211 1e-52
gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subc... 211 2e-52
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera] 211 2e-52
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 210 3e-52
gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group... 210 3e-52
>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
Length = 1424
Score = 295 bits (755), Expect = 8e-78
Identities = 128/205 (62%), Positives = 165/205 (80%)
Frame = -2
Query: 616 LWHGRLGHPAAKTLHSILRYCNVSIDTKFVPSFSSACCLGKTHKFPFSNFETVFTAPLEL 437
LWH RLGHP++ + +L CN+ K S CC+GK HK F + + +T PLEL
Sbjct: 506 LWHNRLGHPSSHIVSLVLNKCNLPHLNKIPSLICSXCCMGKIHKSSFLHSTSSYTKPLEL 565
Query: 436 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLRHKSEAFQTFIHFKTQVELQLGHK 257
+H D+WGP+ SS+G++YYIHF+D++SR+TWIY+L+HKSEAFQ F+HFK+QVELQLGHK
Sbjct: 566 IHTDLWGPASTPSSHGHQYYIHFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVELQLGHK 625
Query: 256 IKAIQTDWGGEYQTFTSFLQTRGIIHRVSCPRTHEQNGLTERKHRHVVDIGLTLLAQASM 77
IKA+Q+DWGGEY++FT +L + GIIHR+SCP THEQNGL ERKHRH+V+ G+ LLAQAS+
Sbjct: 626 IKAVQSDWGGEYRSFTQYLTSNGIIHRISCPYTHEQNGLAERKHRHIVEHGIALLAQASL 685
Query: 76 PLKFWDEPFRTSVFLINRLPTPVLQ 2
P K+WDE FRTSV+LINRLPTPVL+
Sbjct: 686 PFKYWDEAFRTSVYLINRLPTPVLK 710
>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
Length = 1455
Score = 291 bits (745), Expect = 1e-76
Identities = 130/208 (62%), Positives = 167/208 (80%)
Frame = -2
Query: 628 SNVDLWHGRLGHPAAKTLHSILRYCNVSIDTKFVPSFSSACCLGKTHKFPFSNFETVFTA 449
S DLWH RLGHP+A T+ ++L CNV+ K +F S+CCLGK H+FPFS T +T
Sbjct: 519 STFDLWHKRLGHPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKIHRFPFSLSHTTYTK 578
Query: 448 PLELVHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLRHKSEAFQTFIHFKTQVELQ 269
PLEL+HLD+WGP+ ++S++GYRYYIHFVD+FSR++WI+LLR+KSEA +TF++FKTQVELQ
Sbjct: 579 PLELIHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQ 638
Query: 268 LGHKIKAIQTDWGGEYQTFTSFLQTRGIIHRVSCPRTHEQNGLTERKHRHVVDIGLTLLA 89
KIK++QTDWGGE++ F S+L GI+HRVSCP T +QNG+ ERKHR +V+ GLTLL
Sbjct: 639 FDLKIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLH 698
Query: 88 QASMPLKFWDEPFRTSVFLINRLPTPVL 5
AS+PLKFWDE FRT V+L NRLPT +L
Sbjct: 699 TASLPLKFWDESFRTVVYLSNRLPTAIL 726
>emb|CAN60188.1| hypothetical protein VITISV_002117 [Vitis vinifera]
Length = 1079
Score = 270 bits (690), Expect = 3e-70
Identities = 121/208 (58%), Positives = 157/208 (75%), Gaps = 1/208 (0%)
Frame = -2
Query: 628 SNVDLWHGRLGHPAAKTLHSILRYCNVSIDTKFVPSF-SSACCLGKTHKFPFSNFETVFT 452
S V +WH RLGHP+ K + +++ C +S K +P+F ACCLGK H PF + +
Sbjct: 447 STVGIWHDRLGHPSFKIVQTVMSLCKLSKFNKILPNFVCKACCLGKIHMLPFPTSISEYQ 506
Query: 451 APLELVHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLRHKSEAFQTFIHFKTQVEL 272
PL+LV+ D+WGPSP+ SSNGY+YY+ FVD+FSRY WIYLLR+KS +FQTF +FK Q +L
Sbjct: 507 EPLQLVYSDLWGPSPVQSSNGYKYYVCFVDAFSRYNWIYLLRNKSNSFQTFQNFKAQAKL 566
Query: 271 QLGHKIKAIQTDWGGEYQTFTSFLQTRGIIHRVSCPRTHEQNGLTERKHRHVVDIGLTLL 92
QLG KIK +Q+DW GE+ FT +L GIIHR+ CP T++QNG+ ERKHRH+V+ GLTLL
Sbjct: 567 QLGFKIKCLQSDWRGEFCAFTDYLTINGIIHRIYCPHTYQQNGVAERKHRHIVENGLTLL 626
Query: 91 AQASMPLKFWDEPFRTSVFLINRLPTPV 8
A+ASMP K+WDE F+T VFL NRLP+PV
Sbjct: 627 ARASMPFKYWDESFKTVVFLHNRLPSPV 654
>ref|XP_006580845.1| PREDICTED: uncharacterized protein LOC102660325 [Glycine max]
Length = 868
Score = 229 bits (585), Expect = 4e-58
Identities = 100/201 (49%), Positives = 140/201 (69%)
Frame = -2
Query: 616 LWHGRLGHPAAKTLHSILRYCNVSIDTKFVPSFSSACCLGKTHKFPFSNFETVFTAPLEL 437
LWH RLGHP L + + C++ + +K + SACCLGK+H+ P S TV++ P EL
Sbjct: 568 LWHSRLGHPHHHALTEVFKLCHLPVPSKPLAELCSACCLGKSHRLPTSLSATVYSQPFEL 627
Query: 436 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLRHKSEAFQTFIHFKTQVELQLGHK 257
V D+WGP+P+ S GY Y++ VD+FSR+ W++ LR KS+ FI FK VELQ +
Sbjct: 628 VVCDLWGPAPMQSLGGYNYFLTCVDAFSRFVWVFPLRLKSDTLPQFIQFKKMVELQFNYP 687
Query: 256 IKAIQTDWGGEYQTFTSFLQTRGIIHRVSCPRTHEQNGLTERKHRHVVDIGLTLLAQASM 77
IK++Q++ GGE++ FT +L GI+HR +CP TH QNG+ ERKHR+ V+ GL LLAQ+++
Sbjct: 688 IKSVQSNGGGEFRPFTKYLNDLGIVHRFTCPHTHHQNGIVERKHRYTVETGLALLAQSTL 747
Query: 76 PLKFWDEPFRTSVFLINRLPT 14
PLKFWD F T+ +LINRLP+
Sbjct: 748 PLKFWDHSFVTAAYLINRLPS 768
>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1460
Score = 225 bits (573), Expect = 1e-56
Identities = 103/207 (49%), Positives = 140/207 (67%)
Frame = -2
Query: 625 NVDLWHGRLGHPAAKTLHSILRYCNVSIDTKFVPSFSSACCLGKTHKFPFSNFETVFTAP 446
++D WH RLGHP+ T+ ++ ++ S +AC K+H+ PF +V P
Sbjct: 449 SLDRWHHRLGHPSITTVKQVVNKFSLPCSDLSSESVCNACQQAKSHQLPFPISSSVSKHP 508
Query: 445 LELVHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLRHKSEAFQTFIHFKTQVELQL 266
LELV D+WGP+P S +YY+ F+D FS++TWIYL++HKS+ F F F+ VE Q
Sbjct: 509 LELVFSDVWGPAP-ESVGRKKYYVSFIDDFSKFTWIYLIQHKSQVFDKFQEFQVMVERQF 567
Query: 265 GHKIKAIQTDWGGEYQTFTSFLQTRGIIHRVSCPRTHEQNGLTERKHRHVVDIGLTLLAQ 86
KI A+QTDWGGEYQ+ SF GI+H VSCP TH+QNG ERKHRH+V+IGL+LL+
Sbjct: 568 DRKILAMQTDWGGEYQSLNSFFSKIGIVHHVSCPHTHQQNGSAERKHRHIVEIGLSLLSH 627
Query: 85 ASMPLKFWDEPFRTSVFLINRLPTPVL 5
ASMPLKFWDE F+ + +LINR+P+ V+
Sbjct: 628 ASMPLKFWDEAFQVATYLINRVPSRVI 654
>gb|AGV40508.1| hypothetical protein [Phaseolus vulgaris]
Length = 1121
Score = 223 bits (568), Expect = 4e-56
Identities = 105/208 (50%), Positives = 141/208 (67%)
Frame = -2
Query: 625 NVDLWHGRLGHPAAKTLHSILRYCNVSIDTKFVPSFSSACCLGKTHKFPFSNFETVFTAP 446
+V+ WH R GH + L IL C++ + V F S+C GK H+ PF N ++ P
Sbjct: 355 SVNQWHERFGHCSFNILKKILASCDIFVSNNIV--FCSSCVRGKCHQLPFYNSTHTYSQP 412
Query: 445 LELVHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLRHKSEAFQTFIHFKTQVELQL 266
L L++ D+WGP+ ++ SNG RYY+ FVD++S++TW+YL+ HKS+ F FK VE Q
Sbjct: 413 LRLIYTDVWGPTSVLVSNGARYYVSFVDAYSKFTWLYLIHHKSQVKNVFKTFKNLVENQT 472
Query: 265 GHKIKAIQTDWGGEYQTFTSFLQTRGIIHRVSCPRTHEQNGLTERKHRHVVDIGLTLLAQ 86
G+KI A+Q+D EY + TS+LQ GI HR+SCP THEQNG ERKHRH+VD+GLTLL+
Sbjct: 473 GYKIHALQSDNAKEYLSLTSYLQECGINHRLSCPYTHEQNGYVERKHRHIVDMGLTLLST 532
Query: 85 ASMPLKFWDEPFRTSVFLINRLPTPVLQ 2
AS+PLKFW E F +V IN LPT VL+
Sbjct: 533 ASLPLKFWAEAFVAAVHTINVLPTDVLK 560
>gb|AAR88589.1| putative copia-like retrotransposon protein [Oryza sativa Japonica
Group]
Length = 1399
Score = 221 bits (563), Expect = 1e-55
Identities = 102/204 (50%), Positives = 136/204 (66%), Gaps = 1/204 (0%)
Frame = -2
Query: 613 WHGRLGHPAAKTLHSILRYCNVSIDTKF-VPSFSSACCLGKTHKFPFSNFETVFTAPLEL 437
WH RLGHPA + +L N+ T S AC GK+H+ P+ +V + PLEL
Sbjct: 420 WHSRLGHPAVPIVTRVLSKNNLPCSTVANKDSICDACQKGKSHQLPYPKSSSVSSQPLEL 479
Query: 436 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLRHKSEAFQTFIHFKTQVELQLGHK 257
+ ++WGP+PI S G ++Y+ F+D +S++TW+YLL+HKSE FQ F F+T VE GHK
Sbjct: 480 IFSNVWGPAPI-SVGGKKFYVSFIDDYSKFTWVYLLKHKSEVFQKFQEFQTLVERFFGHK 538
Query: 256 IKAIQTDWGGEYQTFTSFLQTRGIIHRVSCPRTHEQNGLTERKHRHVVDIGLTLLAQASM 77
I A+QTDWGGEYQ +F GI H VSCP H+QNG ERKHRH++++ LTLLA ASM
Sbjct: 539 ILAVQTDWGGEYQKLNTFFAKIGISHHVSCPYAHQQNGSAERKHRHLIEVALTLLAHASM 598
Query: 76 PLKFWDEPFRTSVFLINRLPTPVL 5
P+KFWDE + +LINR P+ V+
Sbjct: 599 PIKFWDEAVLAAAYLINRTPSKVI 622
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 218 bits (556), Expect = 9e-55
Identities = 100/205 (48%), Positives = 139/205 (67%), Gaps = 1/205 (0%)
Frame = -2
Query: 613 WHGRLGHPAAKTLHSILRYCNVS-IDTKFVPSFSSACCLGKTHKFPFSNFETVFTAPLEL 437
WH RLGHPA+ + ++ N+ + S AC GK+H+ P+S ++ + PLEL
Sbjct: 458 WHSRLGHPASPIVEKVISKNNLPCLAESNKQSVCDACQQGKSHQLPYSRSSSMSSHPLEL 517
Query: 436 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLRHKSEAFQTFIHFKTQVELQLGHK 257
++ D+WGP+ + S G +YY+ F+ +S++TW+YL++HKSE Q F F+ VE K
Sbjct: 518 IYSDVWGPA-LTSVGGKQYYVSFIGDYSKFTWLYLIKHKSEVIQKFHEFQALVERLFNRK 576
Query: 256 IKAIQTDWGGEYQTFTSFLQTRGIIHRVSCPRTHEQNGLTERKHRHVVDIGLTLLAQASM 77
I A+Q+DWGGEY+ SF GI H VSCP TH+QNG ERKHRH+V++GLTLLA +SM
Sbjct: 577 IIAMQSDWGGEYEKLHSFFTKIGITHHVSCPHTHQQNGSAERKHRHIVEVGLTLLAYSSM 636
Query: 76 PLKFWDEPFRTSVFLINRLPTPVLQ 2
PLKFWDE F+ +V+LINR PT +LQ
Sbjct: 637 PLKFWDEAFQAAVYLINRTPTKLLQ 661
>gb|AAK09230.1|AC084320_17 putative copia-like retrotransposon Hopscotch polyprotein [Oryza
sativa Japonica Group]
gi|14718304|gb|AAK72882.1|AC091123_1 putative gag-pol
protein [Oryza sativa Japonica Group]
Length = 1219
Score = 217 bits (553), Expect = 2e-54
Identities = 102/204 (50%), Positives = 134/204 (65%), Gaps = 1/204 (0%)
Frame = -2
Query: 613 WHGRLGHPAAKTLHSILRYCNVSIDTKFVP-SFSSACCLGKTHKFPFSNFETVFTAPLEL 437
WHGRLGH + + ++ + + S AC GK+H+ PF F +V + PLEL
Sbjct: 446 WHGRLGHASKPIVLRVINQNKLPCSNESPSESVCDACQQGKSHQLPFPKFFSVSSNPLEL 505
Query: 436 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLRHKSEAFQTFIHFKTQVELQLGHK 257
+H D+WGP+ S RYY+ F+D +S++ WIY L+ KSE F+ F F++ VE Q K
Sbjct: 506 IHSDVWGPASD-SVGAKRYYVSFIDDYSKFVWIYFLKFKSEVFEKFKEFQSMVERQFNRK 564
Query: 256 IKAIQTDWGGEYQTFTSFLQTRGIIHRVSCPRTHEQNGLTERKHRHVVDIGLTLLAQASM 77
I +QTDWGGEYQ SF + GI H+VSCP TH+QNG ERKHRH+V+IGL+LLA ASM
Sbjct: 565 ILGMQTDWGGEYQKLNSFFKQIGIAHQVSCPHTHQQNGAVERKHRHIVEIGLSLLAHASM 624
Query: 76 PLKFWDEPFRTSVFLINRLPTPVL 5
PLKFWDE F + +LINRLP V+
Sbjct: 625 PLKFWDEAFLAATYLINRLPRKVI 648
>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
Length = 1402
Score = 216 bits (550), Expect = 4e-54
Identities = 106/205 (51%), Positives = 137/205 (66%)
Frame = -2
Query: 619 DLWHGRLGHPAAKTLHSILRYCNVSIDTKFVPSFSSACCLGKTHKFPFSNFETVFTAPLE 440
+LWH RLGH A + I+ CNVS K+ + S+C L K+H+ P + PLE
Sbjct: 484 ELWHHRLGHAATDIVTRIMHNCNVSCG-KYKATVCSSCQLAKSHRLPTHLSSFHASKPLE 542
Query: 439 LVHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLRHKSEAFQTFIHFKTQVELQLGH 260
LV+ DIWGP+ + S++G +Y+I FVD +SRYTW+YLL+ K +A F FK QVE Q
Sbjct: 543 LVYTDIWGPASVTSTSGAKYFILFVDDYSRYTWLYLLQSKDQALPIFKXFKLQVENQFEA 602
Query: 259 KIKAIQTDWGGEYQTFTSFLQTRGIIHRVSCPRTHEQNGLTERKHRHVVDIGLTLLAQAS 80
KIK +Q D GGE+++F SFLQ GI+HR SCP QNG ERKHRHVV+ GL LLA A
Sbjct: 603 KIKCLQXDNGGEFRSFMSFLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAG 662
Query: 79 MPLKFWDEPFRTSVFLINRLPTPVL 5
+PLKFW F+T+ FLINR+P+ VL
Sbjct: 663 LPLKFWSYAFQTATFLINRMPSKVL 687
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 213 bits (543), Expect = 3e-53
Identities = 102/205 (49%), Positives = 132/205 (64%), Gaps = 1/205 (0%)
Frame = -2
Query: 613 WHGRLGHPAAKTLHSILRYCNVSIDTKFV-PSFSSACCLGKTHKFPFSNFETVFTAPLEL 437
WHGRLGHP+ + IL + + V S AC K H+ PF +V PLEL
Sbjct: 445 WHGRLGHPSKPIVLRILSQNKLPCLSNSVNESVCDACQQAKCHQLPFPRSTSVSNNPLEL 504
Query: 436 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLRHKSEAFQTFIHFKTQVELQLGHK 257
+H D+WGP+ S +YY+ F+D +S++ WIY L+HKSE FQ F F+ VE Q K
Sbjct: 505 IHSDVWGPAS-ESVGAKKYYVSFIDDYSKFVWIYFLKHKSEVFQKFHEFQKLVERQFDRK 563
Query: 256 IKAIQTDWGGEYQTFTSFLQTRGIIHRVSCPRTHEQNGLTERKHRHVVDIGLTLLAQASM 77
I ++QTDWGGEY +F GI H VSCP TH+QNG ERKHRH+V++GL+LLA ASM
Sbjct: 564 ILSMQTDWGGEYLKLHTFFNEIGISHHVSCPHTHQQNGAVERKHRHIVEVGLSLLAHASM 623
Query: 76 PLKFWDEPFRTSVFLINRLPTPVLQ 2
PLKFWDE F + +LINRLP+ V++
Sbjct: 624 PLKFWDEAFLAATYLINRLPSKVIK 648
>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 807
Score = 213 bits (541), Expect = 5e-53
Identities = 98/204 (48%), Positives = 128/204 (62%)
Frame = -2
Query: 613 WHGRLGHPAAKTLHSILRYCNVSIDTKFVPSFSSACCLGKTHKFPFSNFETVFTAPLELV 434
WH RL HP + ++ + S AC K+H+ P+S +V T PLELV
Sbjct: 422 WHSRLSHPTTPIVSRVVNQNKLPCQKSHSESVCDACQKAKSHQLPYSRSTSVSTRPLELV 481
Query: 433 HLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLRHKSEAFQTFIHFKTQVELQLGHKI 254
+ D+WG +P S G ++Y+ F+D FS++TW+Y L+HKS+ FQ F F+ VE LGHKI
Sbjct: 482 YSDVWGTAP-SSVGGNKFYVSFIDDFSKFTWVYSLKHKSDVFQKFHEFQALVERLLGHKI 540
Query: 253 KAIQTDWGGEYQTFTSFLQTRGIIHRVSCPRTHEQNGLTERKHRHVVDIGLTLLAQASMP 74
+Q DWGGEYQ SF GI H VSCP H+QN ERKHRH+V++GL LLA ASMP
Sbjct: 541 ITMQKDWGGEYQKLHSFFDKIGISHHVSCPYAHQQNSSAERKHRHIVEVGLALLAHASMP 600
Query: 73 LKFWDEPFRTSVFLINRLPTPVLQ 2
LK WDE F T+ +LINR P V++
Sbjct: 601 LKLWDEVFYTAAYLINRTPNKVIK 624
>gb|AAU10682.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1210
Score = 213 bits (541), Expect = 5e-53
Identities = 103/209 (49%), Positives = 137/209 (65%), Gaps = 2/209 (0%)
Frame = -2
Query: 622 VDLWHGRLGHPAAKTLHSILRYCNVSI--DTKFVPSFSSACCLGKTHKFPFSNFETVFTA 449
V +WH RLGHP+ + + ++ + N+ ++K + AC GK+H+ PF +
Sbjct: 446 VSIWHSRLGHPSWQIVQKVVSHNNLPCLGESKEL-GVCDACQKGKSHQLPFLKSTSASNF 504
Query: 448 PLELVHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLRHKSEAFQTFIHFKTQVELQ 269
PLELV D+WGP+P S G +YY+ F+D FS++TWIYLL+ KSE F F F+ VE
Sbjct: 505 PLELVFSDVWGPAPD-SVGGRKYYVSFIDDFSKFTWIYLLKQKSEVFHKFHEFQQLVERI 563
Query: 268 LGHKIKAIQTDWGGEYQTFTSFLQTRGIIHRVSCPRTHEQNGLTERKHRHVVDIGLTLLA 89
KI A+QTDWGGEY+ F GI H VSCP TH+QNG ERKHRH+V++GL+LLA
Sbjct: 564 FYRKIIAMQTDWGGEYEKLHDFFTKIGISHHVSCPHTHQQNGSAERKHRHIVEVGLSLLA 623
Query: 88 QASMPLKFWDEPFRTSVFLINRLPTPVLQ 2
ASMPLKFWDE F + +LINR P+ V+Q
Sbjct: 624 HASMPLKFWDEAFIAATYLINRTPSKVIQ 652
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 212 bits (540), Expect = 6e-53
Identities = 99/205 (48%), Positives = 135/205 (65%), Gaps = 1/205 (0%)
Frame = -2
Query: 613 WHGRLGHPAAKTLHSILRYCNVSIDTKFV-PSFSSACCLGKTHKFPFSNFETVFTAPLEL 437
WH RLGHP+ + ++ N+ + V S +AC K+H+ P+ +V PLEL
Sbjct: 461 WHSRLGHPSLPIVKQVISRNNLPCSVESVNQSVCNACQEAKSHQLPYIRSTSVSQFPLEL 520
Query: 436 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLRHKSEAFQTFIHFKTQVELQLGHK 257
V D+WGP+P S +YY+ F+D FS++TWIYLL++KSE F+ F F+ VE K
Sbjct: 521 VFSDVWGPAP-ESVGRNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMFDRK 579
Query: 256 IKAIQTDWGGEYQTFTSFLQTRGIIHRVSCPRTHEQNGLTERKHRHVVDIGLTLLAQASM 77
I A+QTDWGGEYQ SF GI H VSCP TH+QNG ERKH+H++++GL+LL+ ASM
Sbjct: 580 IIAMQTDWGGEYQKLNSFFAQIGIDHHVSCPHTHQQNGSAERKHKHIIEVGLSLLSYASM 639
Query: 76 PLKFWDEPFRTSVFLINRLPTPVLQ 2
PLKFWDE F + +LINR+P+ +Q
Sbjct: 640 PLKFWDEAFVAATYLINRIPSKTIQ 664
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 212 bits (540), Expect = 6e-53
Identities = 99/205 (48%), Positives = 135/205 (65%), Gaps = 1/205 (0%)
Frame = -2
Query: 613 WHGRLGHPAAKTLHSILRYCNVSIDTKFV-PSFSSACCLGKTHKFPFSNFETVFTAPLEL 437
WH RLGHP+ + ++ N+ + V S +AC K+H+ P+ +V PLEL
Sbjct: 461 WHSRLGHPSLPIVKQVISRNNLPCSVESVNQSVCNACQEAKSHQLPYIRSTSVSQFPLEL 520
Query: 436 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLRHKSEAFQTFIHFKTQVELQLGHK 257
V D+WGP+P S +YY+ F+D FS++TWIYLL++KSE F+ F F+ VE K
Sbjct: 521 VFSDVWGPAP-ESVGRNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMFDRK 579
Query: 256 IKAIQTDWGGEYQTFTSFLQTRGIIHRVSCPRTHEQNGLTERKHRHVVDIGLTLLAQASM 77
I A+QTDWGGEYQ SF GI H VSCP TH+QNG ERKH+H++++GL+LL+ ASM
Sbjct: 580 IIAMQTDWGGEYQKLNSFFAQIGIDHHVSCPHTHQQNGSAERKHKHIIEVGLSLLSYASM 639
Query: 76 PLKFWDEPFRTSVFLINRLPTPVLQ 2
PLKFWDE F + +LINR+P+ +Q
Sbjct: 640 PLKFWDEAFVAATYLINRIPSKTIQ 664
>emb|CAN71138.1| hypothetical protein VITISV_008660 [Vitis vinifera]
Length = 1138
Score = 211 bits (537), Expect = 1e-52
Identities = 104/208 (50%), Positives = 136/208 (65%)
Frame = -2
Query: 628 SNVDLWHGRLGHPAAKTLHSILRYCNVSIDTKFVPSFSSACCLGKTHKFPFSNFETVFTA 449
S DLWH RLGHP+A + ++L +K+
Sbjct: 470 STFDLWHRRLGHPSAAIIKNVL--------SKY--------------------------- 494
Query: 448 PLELVHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLRHKSEAFQTFIHFKTQVELQ 269
+WGP+P++S++GYRYYIHFVD+FSR++WI+LLR++SEA +TF++FKTQVELQ
Sbjct: 495 --------LWGPAPVLSNSGYRYYIHFVDAFSRFSWIFLLRNESEAIKTFVNFKTQVELQ 546
Query: 268 LGHKIKAIQTDWGGEYQTFTSFLQTRGIIHRVSCPRTHEQNGLTERKHRHVVDIGLTLLA 89
KIK++QTDWGGE++ F S+L GI+HRVSCP T +QNG+ E KHR +V GLTLL
Sbjct: 547 FDSKIKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAEWKHRTIVXHGLTLLH 606
Query: 88 QASMPLKFWDEPFRTSVFLINRLPTPVL 5
A +PLKFWDE FRT V+L NRLPT VL
Sbjct: 607 IAYLPLKFWDESFRTVVYLSNRLPTAVL 634
>gb|ABA97008.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1202
Score = 211 bits (536), Expect = 2e-52
Identities = 101/200 (50%), Positives = 128/200 (64%), Gaps = 1/200 (0%)
Frame = -2
Query: 613 WHGRLGHPAAKTLHSILRYCNVSIDTKFV-PSFSSACCLGKTHKFPFSNFETVFTAPLEL 437
WHGRLGHP+ + IL + + V S AC K H+ PF +V PLEL
Sbjct: 454 WHGRLGHPSKPIVLRILSQNKLPCLSNSVNESVCDACQQAKCHQLPFPRSTSVSNNPLEL 513
Query: 436 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLRHKSEAFQTFIHFKTQVELQLGHK 257
+H D+WGP+ S +YY+ F+D +S++ WIY L+HKSE FQ F F+ VE Q K
Sbjct: 514 IHSDVWGPAS-ESVGAKKYYVSFIDDYSKFVWIYFLKHKSEVFQKFHEFQKLVEWQFDRK 572
Query: 256 IKAIQTDWGGEYQTFTSFLQTRGIIHRVSCPRTHEQNGLTERKHRHVVDIGLTLLAQASM 77
I ++QTDWGGEY +F GI H VSCP TH+QNG ERKHRH+V++GL+LLA ASM
Sbjct: 573 ILSMQTDWGGEYLKLHTFFNEIGISHHVSCPHTHQQNGAVERKHRHIVEVGLSLLAHASM 632
Query: 76 PLKFWDEPFRTSVFLINRLP 17
PLKFWDE F + +LINRLP
Sbjct: 633 PLKFWDEDFLAATYLINRLP 652
>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
Length = 1432
Score = 211 bits (536), Expect = 2e-52
Identities = 105/211 (49%), Positives = 139/211 (65%), Gaps = 2/211 (0%)
Frame = -2
Query: 628 SNVDLWHGRLGHPAAKTLHSILRYCNVSIDTKFVPSFSSACCLGKTHKFP--FSNFETVF 455
+ +LWH RLGH + + ++ CNV+ K+ S C L K+H+ P SNF
Sbjct: 486 NKAELWHNRLGHASFDIVSKVMNTCNVA-SGKYKSFVCSDCQLAKSHRLPTQLSNFHA-- 542
Query: 454 TAPLELVHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLRHKSEAFQTFIHFKTQVE 275
+ PLELV+ DIWGP+ I S++G RY+I FVD +SRYTW Y L+ K +A F FK Q+E
Sbjct: 543 SKPLELVYTDIWGPASIKSTSGARYFILFVDDYSRYTWFYSLQTKDQALPIFKXFKLQME 602
Query: 274 LQLGHKIKAIQTDWGGEYQTFTSFLQTRGIIHRVSCPRTHEQNGLTERKHRHVVDIGLTL 95
Q KIK +Q+D GGE+++FTSFLQ GI HR SCP QNG ERKHRHVV+ GL L
Sbjct: 603 NQFDTKIKCLQSDNGGEFRSFTSFLQAVGIAHRFSCPYNSXQNGRVERKHRHVVETGLAL 662
Query: 94 LAQASMPLKFWDEPFRTSVFLINRLPTPVLQ 2
L+ AS+P+K+W F+T FLINR+P+ VL+
Sbjct: 663 LSHASLPMKYWHYAFQTXTFLINRMPSKVLE 693
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 210 bits (534), Expect = 3e-52
Identities = 99/205 (48%), Positives = 134/205 (65%), Gaps = 1/205 (0%)
Frame = -2
Query: 613 WHGRLGHPAAKTLHSILRYCNVSIDTKFV-PSFSSACCLGKTHKFPFSNFETVFTAPLEL 437
WH RLGHP+ + ++ N+ + V S +AC K+ + P+ +V PLEL
Sbjct: 458 WHSRLGHPSLPIVKQVISKNNLPCSVESVNQSVCNACQEAKSRQLPYVRSTSVSQFPLEL 517
Query: 436 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLRHKSEAFQTFIHFKTQVELQLGHK 257
V D+WGP+P S +YY+ F+D FS++TWIYLL++KSE F+ F F+ VE K
Sbjct: 518 VFSDVWGPAP-ESVGRNKYYVSFIDDFSKFTWIYLLKYKSEVFEKFKEFQALVERMFDRK 576
Query: 256 IKAIQTDWGGEYQTFTSFLQTRGIIHRVSCPRTHEQNGLTERKHRHVVDIGLTLLAQASM 77
I A+QTDWGGEYQ SF GI H VSCP TH+QNG ERKHRH++++GL+LL+ ASM
Sbjct: 577 IIAMQTDWGGEYQKLNSFFAKIGIDHHVSCPHTHQQNGSAERKHRHIIEVGLSLLSYASM 636
Query: 76 PLKFWDEPFRTSVFLINRLPTPVLQ 2
PLKFWDE F + +LINR+P+ +Q
Sbjct: 637 PLKFWDEAFVAATYLINRVPSKTIQ 661
>gb|AAT85031.1| putative polyprotein [Oryza sativa Japonica Group]
gi|108708884|gb|ABF96679.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1437
Score = 210 bits (534), Expect = 3e-52
Identities = 100/204 (49%), Positives = 132/204 (64%), Gaps = 1/204 (0%)
Frame = -2
Query: 613 WHGRLGHPAAKTLHSILRYCNVS-IDTKFVPSFSSACCLGKTHKFPFSNFETVFTAPLEL 437
WH RLGHP+ + +++ N+ +D S AC K+H+ F + PLEL
Sbjct: 456 WHSRLGHPSYTVVEKVIKSQNLPCLDVSEQVSVCDACQKAKSHQLSFPKSTSESKYPLEL 515
Query: 436 VHLDIWGPSPIMSSNGYRYYIHFVDSFSRYTWIYLLRHKSEAFQTFIHFKTQVELQLGHK 257
V D+WGP+P N +YY+ F+D +S++TWIYLL++KSE F F F++ VE K
Sbjct: 516 VFSDVWGPAPQSVGNN-KYYVSFIDDYSKFTWIYLLKYKSEVFDKFHEFQSLVERLFNRK 574
Query: 256 IKAIQTDWGGEYQTFTSFLQTRGIIHRVSCPRTHEQNGLTERKHRHVVDIGLTLLAQASM 77
I A+QTDWGGEYQ SF GI H VSCP TH+QNG ERKHRH+V++GL LLA +SM
Sbjct: 575 IVAMQTDWGGEYQKLHSFFNKVGITHHVSCPHTHQQNGSAERKHRHIVEVGLALLAYSSM 634
Query: 76 PLKFWDEPFRTSVFLINRLPTPVL 5
PLKFW E F ++V+LINR P+ VL
Sbjct: 635 PLKFWGEAFLSAVYLINRTPSRVL 658